comparison jbrowse.py @ 21:1c718d8b3532 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 9cac72c004cc7ef57be997e2fdafb3b1839a300f

20:558d652cd681

        clientConfig = trackData['style']
        del config['style']

        if 'match' in gffOpts:
            config['glyph'] = 'JBrowse/View/FeatureGlyph/Segments'
            cmd += ['--type', gffOpts['match']]

        cmd += ['--clientConfig', json.dumps(clientConfig),
                ]

        trackType = 'JBrowse/View/Track/CanvasFeatures'

21:1c718d8b3532

        clientConfig = trackData['style']
        del config['style']

        if 'match' in gffOpts:
            config['glyph'] = 'JBrowse/View/FeatureGlyph/Segments'
            if bool(gffOpts['match']):
                # Can be empty for CanvasFeatures = will take all by default
                cmd += ['--type', gffOpts['match']]

        cmd += ['--clientConfig', json.dumps(clientConfig),
                ]

        trackType = 'JBrowse/View/Track/CanvasFeatures'