Mercurial > repos > iuc > jbrowse
comparison test-data/track_config/test.xml @ 25:1cfc579079a6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit b6f9a87b6091cc881a49e0b6acfadc5e7786967f
| author | iuc |
|---|---|
| date | Tue, 29 Jan 2019 05:34:16 -0500 |
| parents | ff11d442feed |
| children | 2bb2e07a7a21 |
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| 24:fa30df9b79c2 | 25:1cfc579079a6 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <root> | 2 <root> |
| 3 <metadata> | 3 <metadata> |
| 4 <gencode>11</gencode> | 4 <gencode>11</gencode> |
| 5 <genomes> | 5 <genomes> |
| 6 <genome path="/tmp/tmpnh6QWY/files/000/dataset_17.dat"> | 6 <genome path="/tmp/tmpWtvfKr/files/000/dataset_17.dat"> |
| 7 <metadata> | 7 <metadata> |
| 8 <dataset id="27ee89e2e3d631e0" hid="1" | 8 <dataset id="27ee89e2e3d631e0" hid="1" |
| 9 size="171.6 KB" | 9 size="171.6 KB" |
| 10 edam_format="format_1929" | 10 edam_format="format_1929" |
| 11 file_ext="fasta" /> | 11 file_ext="fasta" /> |
| 12 <history id="7b55dbb89df8f4e5" | 12 <history id="7b55dbb89df8f4e5" |
| 13 user_email="test@bx.psu.edu" | 13 user_email="test@bx.psu.edu" |
| 14 user_id="2" | 14 user_id="2" |
| 15 display_name="test_history"/> | 15 display_name="test_history"/> |
| 16 <metadata | 16 <metadata |
| 17 dbkey="hg17" | 17 dbkey="?" |
| 18 data_lines="2881" | 18 data_lines="2881" |
| 19 sequences="1" | 19 sequences="1" |
| 20 /> | 20 /> |
| 21 <tool | 21 <tool |
| 22 tool_id="upload1" | 22 tool_id="upload1" |
| 23 tool_version="1.1.4" | 23 tool_version="1.1.6" |
| 24 /> | 24 /> |
| 25 </metadata> | 25 </metadata> |
| 26 </genome> | 26 </genome> |
| 27 </genomes> | 27 </genomes> |
| 28 <general> | 28 <general> |
| 29 <defaultLocation></defaultLocation> | 29 <defaultLocation></defaultLocation> |
| 30 <trackPadding>20</trackPadding> | 30 <trackPadding>20</trackPadding> |
| 31 | 31 |
| 35 <show_nav>true</show_nav> | 35 <show_nav>true</show_nav> |
| 36 <show_overview>true</show_overview> | 36 <show_overview>true</show_overview> |
| 37 <show_menu>true</show_menu> | 37 <show_menu>true</show_menu> |
| 38 <hideGenomeOptions>false</hideGenomeOptions> | 38 <hideGenomeOptions>false</hideGenomeOptions> |
| 39 </general> | 39 </general> |
| 40 <galaxyUrl>http://localhost:8080</galaxyUrl> | 40 <galaxyUrl>http://localhost</galaxyUrl> |
| 41 </metadata> | 41 </metadata> |
| 42 <tracks> | 42 <tracks> |
| 43 <track cat="With canvas config" format="gene_calls" visibility="default_off"> | 43 <track cat="With canvas config" format="gene_calls" visibility="default_off"> |
| 44 <files> | 44 <files> |
| 45 <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_18.dat" ext="gff3" label="1.gff"> | 45 <trackFile path="/tmp/tmpWtvfKr/files/000/dataset_18.dat" ext="gff3" label="1.gff"> |
| 46 <metadata> | 46 <metadata> |
| 47 <dataset id="61f03d5eef6f1538" hid="2" | 47 <dataset id="61f03d5eef6f1538" hid="2" |
| 48 size="2.3 KB" | 48 size="2.3 KB" |
| 49 edam_format="format_1975" | 49 edam_format="format_1975" |
| 50 file_ext="gff3" /> | 50 file_ext="gff3" /> |
| 51 <history id="7b55dbb89df8f4e5" | 51 <history id="7b55dbb89df8f4e5" |
| 52 user_email="test@bx.psu.edu" | 52 user_email="test@bx.psu.edu" |
| 53 user_id="2" | 53 user_id="2" |
| 54 display_name="test_history"/> | 54 display_name="test_history"/> |
| 55 <metadata | 55 <metadata |
| 56 dbkey="hg17" | 56 dbkey="?" |
| 57 data_lines="27" | 57 data_lines="27" |
| 58 comment_lines="19" | 58 comment_lines="19" |
| 59 columns="9" | 59 columns="9" |
| 60 column_names="" | 60 column_names="" |
| 61 delimiter="__tc__" | 61 delimiter="__tc__" |
| 62 attributes="6" | 62 attributes="6" |
| 63 /> | 63 /> |
| 64 <tool | 64 <tool |
| 65 tool_id="upload1" | 65 tool_id="upload1" |
| 66 tool_version="1.1.4" | 66 tool_version="1.1.6" |
| 67 /> | 67 /> |
| 68 </metadata> | 68 </metadata> |
| 69 </trackFile> | 69 </trackFile> |
| 70 </files> | 70 </files> |
| 71 | 71 |