comparison macros.xml @ 31:2bb2e07a7a21 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 12dff0abf006f6c81f6462cdf4ea9c0c740d1e9c

30:ca2def38369c

      <requirement type="package" version="0.2.6">tabix</requirement>
      <yield/>
    </requirements>
  </xml>
  <token name="@DATA_DIR@">\$GALAXY_JBROWSE_SHARED_DIR</token>
  <token name="@WRAPPER_VERSION@">galaxy2</token>
  <token name="@ATTRIBUTION@"><![CDATA[
**Attribution**

This Galaxy tool relies on the JBrowse, maintained by the GMOD Community. The Galaxy wrapper is developed by Eric Rasche
]]>

        <param label="JBrowse maxHeight"
               type="text"
               name="max_height"
               value="@MAXHEIGHT@"
               help="Maximum height that the track is permitted to reach in pixels."/>
    </section>
  </xml>

  <xml name="track_menu">
    <section name="jbmenu" title="JBrowse Contextual Menu options [Advanced]" expanded="false">

31:2bb2e07a7a21

      <requirement type="package" version="0.2.6">tabix</requirement>
      <yield/>
    </requirements>
  </xml>
  <token name="@DATA_DIR@">\$GALAXY_JBROWSE_SHARED_DIR</token>
  <token name="@WRAPPER_VERSION@">galaxy3</token>
  <token name="@ATTRIBUTION@"><![CDATA[
**Attribution**

This Galaxy tool relies on the JBrowse, maintained by the GMOD Community. The Galaxy wrapper is developed by Eric Rasche
]]>

        <param label="JBrowse maxHeight"
               type="text"
               name="max_height"
               value="@MAXHEIGHT@"
               help="Maximum height that the track is permitted to reach in pixels."/>
    </section>
  </xml>

  <xml name="track_custom_config">
    <section name="jb_custom_config" title="JBrowse Custom Track Config [Advanced]" expanded="false">
      <repeat name="option" title="Custom Track Config Option">
        <param name="opt_key" type="text" label="Key for JBrowse track config option"
               help="Multilevel keys (e.g., 'style.label') are delimited by a period character ('.').">
          <validator type="regex" message="Key must consist of alphanumeric characters only, possibly separated by the period character ('.')">^[\w]+(\.\w+)*$</validator>
        </param>
        <conditional name="opt_value">
          <param name="val_type" type="select" label="Choose the type of value for the option">
            <option value="text" selected="true">Text</option>
            <option value="integer">Integer number</option>
            <option value="float">Floating point number</option>
            <option value="boolean">Boolean</option>
          </param>
          <when value="text">
            <param name="val" type="text" label="Value for custom track option."
                   help="Will override other track options set elsewhere.">
              <validator type="empty_field" />
            </param>
          </when>
          <when value="integer">
            <param name="val" type="integer" value="0" label="Value for custom track option."
                   help="Will override other track options set elsewhere." />
          </when>
          <when value="float">
            <param name="val" type="float" value="0" label="Value for custom track option."
                   help="Will override other track options set elsewhere." />
          </when>
          <when value="boolean">
            <param name="val" type="boolean" truevalue="true" falsevalue="false"
                   label="Value for custom track option."
                   help="Will override other track options set elsewhere." />
          </when>
        </conditional>
      </repeat>
    </section>
  </xml>

  <xml name="track_menu">
    <section name="jbmenu" title="JBrowse Contextual Menu options [Advanced]" expanded="false">