comparison jbrowse.py @ 11:4cbceec1d6b4 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 172014e3f03ea00dfd5fcd689e1246d001e82288

10:1a6d882d340d

#!/usr/bin/env python
import argparse
import copy
import hashlib
import json
import logging
import os

    def __init__(self):
        self.brewer_colour_idx = 0

    def rgb_from_hex(self, hexstr):
        # http://stackoverflow.com/questions/4296249/how-do-i-convert-a-hex-triplet-to-an-rgb-tuple-and-back
        return struct.unpack('BBB', hexstr.decode('hex'))

    def min_max_gff(self, gff_file):
        min_val = None
        max_val = None
        with open(gff_file, 'r') as handle:

11:4cbceec1d6b4

#!/usr/bin/env python
import argparse
import codecs
import copy
import hashlib
import json
import logging
import os

    def __init__(self):
        self.brewer_colour_idx = 0

    def rgb_from_hex(self, hexstr):
        # http://stackoverflow.com/questions/4296249/how-do-i-convert-a-hex-triplet-to-an-rgb-tuple-and-back
        return struct.unpack('BBB', codecs.decode(hexstr, 'hex'))

    def min_max_gff(self, gff_file):
        min_val = None
        max_val = None
        with open(gff_file, 'r') as handle: