Mercurial > repos > iuc > jbrowse
comparison test-data/menus/test.xml @ 17:ff11d442feed draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
| author | iuc |
|---|---|
| date | Wed, 15 Nov 2017 15:15:27 -0500 |
| parents | ad4b9d7eae6a |
| children | 1cfc579079a6 |
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| 16:b5c5470d7c09 | 17:ff11d442feed |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <root> | 2 <root> |
| 3 <metadata> | 3 <metadata> |
| 4 <gencode>11</gencode> | 4 <gencode>11</gencode> |
| 5 <genomes> | 5 <genomes> |
| 6 <genome>/tmp/tmplFZ5li/files/000/dataset_14.dat</genome> | 6 <genome path="/tmp/tmpnh6QWY/files/000/dataset_14.dat"> |
| 7 <metadata> | |
| 8 <dataset id="1ae74d26531588b0" hid="1" | |
| 9 size="171.6 KB" | |
| 10 edam_format="format_1929" | |
| 11 file_ext="fasta" /> | |
| 12 <history id="8155e4b4bf1581ff" | |
| 13 user_email="test@bx.psu.edu" | |
| 14 user_id="2" | |
| 15 display_name="test_history"/> | |
| 16 <metadata | |
| 17 dbkey="hg17" | |
| 18 data_lines="2881" | |
| 19 sequences="1" | |
| 20 /> | |
| 21 <tool | |
| 22 tool_id="upload1" | |
| 23 tool_version="1.1.4" | |
| 24 /> | |
| 25 </metadata> | |
| 26 </genome> | |
| 7 </genomes> | 27 </genomes> |
| 8 <general> | 28 <general> |
| 9 <defaultLocation></defaultLocation> | 29 <defaultLocation></defaultLocation> |
| 10 <trackPadding>20</trackPadding> | 30 <trackPadding>20</trackPadding> |
| 11 | 31 |
| 15 <show_nav>true</show_nav> | 35 <show_nav>true</show_nav> |
| 16 <show_overview>true</show_overview> | 36 <show_overview>true</show_overview> |
| 17 <show_menu>true</show_menu> | 37 <show_menu>true</show_menu> |
| 18 <hideGenomeOptions>false</hideGenomeOptions> | 38 <hideGenomeOptions>false</hideGenomeOptions> |
| 19 </general> | 39 </general> |
| 40 <galaxyUrl>http://localhost:8080</galaxyUrl> | |
| 20 </metadata> | 41 </metadata> |
| 21 <tracks> | 42 <tracks> |
| 22 <track cat="With menu or index" format="gene_calls" visibility="default_off"> | 43 <track cat="With menu or index" format="gene_calls" visibility="default_off"> |
| 23 <files> | 44 <files> |
| 24 <trackFile path="/tmp/tmplFZ5li/files/000/dataset_15.dat" ext="gff3" label="1.gff" /> | 45 <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff"> |
| 46 <metadata> | |
| 47 <dataset id="440a6c2b5d9efe20" hid="2" | |
| 48 size="2.3 KB" | |
| 49 edam_format="format_1975" | |
| 50 file_ext="gff3" /> | |
| 51 <history id="8155e4b4bf1581ff" | |
| 52 user_email="test@bx.psu.edu" | |
| 53 user_id="2" | |
| 54 display_name="test_history"/> | |
| 55 <metadata | |
| 56 dbkey="hg17" | |
| 57 data_lines="27" | |
| 58 comment_lines="19" | |
| 59 columns="9" | |
| 60 column_names="" | |
| 61 delimiter="__tc__" | |
| 62 attributes="6" | |
| 63 /> | |
| 64 <tool | |
| 65 tool_id="upload1" | |
| 66 tool_version="1.1.4" | |
| 67 /> | |
| 68 </metadata> | |
| 69 </trackFile> | |
| 25 </files> | 70 </files> |
| 26 | 71 |
| 27 <options> | 72 <options> |
| 28 <style> | 73 <style> |
| 74 <overridePlugins>False</overridePlugins> | |
| 75 <overrideDraggable>False</overrideDraggable> | |
| 29 <className>feature</className> | 76 <className>feature</className> |
| 30 <description>note,description</description> | 77 <description>note,description</description> |
| 31 <label>name,id</label> | 78 <label>product,name,id</label> |
| 32 <height>100px</height> | 79 <height>10px</height> |
| 80 <maxHeight>600</maxHeight> | |
| 33 </style> | 81 </style> |
| 34 <scaling> | 82 <scaling> |
| 35 <method>ignore</method> | 83 <method>ignore</method> |
| 36 <scheme> | 84 <scheme> |
| 37 <color>__auto__</color> | 85 <color>__auto__</color> |
| 60 </gff> | 108 </gff> |
| 61 </options> | 109 </options> |
| 62 </track> | 110 </track> |
| 63 <track cat="With menu or index" format="gene_calls" visibility="default_off"> | 111 <track cat="With menu or index" format="gene_calls" visibility="default_off"> |
| 64 <files> | 112 <files> |
| 65 <trackFile path="/tmp/tmplFZ5li/files/000/dataset_15.dat" ext="gff3" label="1.gff" /> | 113 <trackFile path="/tmp/tmpnh6QWY/files/000/dataset_15.dat" ext="gff3" label="1.gff"> |
| 114 <metadata> | |
| 115 <dataset id="440a6c2b5d9efe20" hid="2" | |
| 116 size="2.3 KB" | |
| 117 edam_format="format_1975" | |
| 118 file_ext="gff3" /> | |
| 119 <history id="8155e4b4bf1581ff" | |
| 120 user_email="test@bx.psu.edu" | |
| 121 user_id="2" | |
| 122 display_name="test_history"/> | |
| 123 <metadata | |
| 124 dbkey="hg17" | |
| 125 data_lines="27" | |
| 126 comment_lines="19" | |
| 127 columns="9" | |
| 128 column_names="" | |
| 129 delimiter="__tc__" | |
| 130 attributes="6" | |
| 131 /> | |
| 132 <tool | |
| 133 tool_id="upload1" | |
| 134 tool_version="1.1.4" | |
| 135 /> | |
| 136 </metadata> | |
| 137 </trackFile> | |
| 66 </files> | 138 </files> |
| 67 | 139 |
| 68 <options> | 140 <options> |
| 69 <style> | 141 <style> |
| 142 <overridePlugins>False</overridePlugins> | |
| 143 <overrideDraggable>False</overrideDraggable> | |
| 70 <className>feature</className> | 144 <className>feature</className> |
| 71 <description>note,description</description> | 145 <description>note,description</description> |
| 72 <label>name,id</label> | 146 <label>product,name,id</label> |
| 73 <height>100px</height> | 147 <height>10px</height> |
| 148 <maxHeight>600</maxHeight> | |
| 74 </style> | 149 </style> |
| 75 <scaling> | 150 <scaling> |
| 76 <method>ignore</method> | 151 <method>ignore</method> |
| 77 <scheme> | 152 <scheme> |
| 78 <color>__auto__</color> | 153 <color>__auto__</color> |
| 86 <index>true</index> | 161 <index>true</index> |
| 87 </gff> | 162 </gff> |
| 88 </options> | 163 </options> |
| 89 </track> | 164 </track> |
| 90 </tracks> | 165 </tracks> |
| 166 <plugins | |
| 167 ComboTrackSelector="" | |
| 168 Bookmarks="" | |
| 169 GCContent="" | |
| 170 theme="" | |
| 171 /> | |
| 91 </root> | 172 </root> |