Mercurial > repos > iuc > kaiju_mergeoutputs
comparison macros.xml @ 1:01585d091036 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/kaiju commit ace4e37c66a95ee5f648b95a92911e1fdf212967
| author | iuc |
|---|---|
| date | Wed, 07 May 2025 08:51:51 +0000 |
| parents | cdc8a98ed4fc |
| children |
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| 0:cdc8a98ed4fc | 1:01585d091036 |
|---|---|
| 1 <macros> | 1 <macros> |
| 2 <token name="@TOOL_VERSION@">1.10.1</token> | 2 <token name="@TOOL_VERSION@">1.10.1</token> |
| 3 <token name="@VERSION_SUFFIX@">0</token> | 3 <token name="@VERSION_SUFFIX@">1</token> |
| 4 <token name="@PROFILE@">23.2</token> | 4 <token name="@PROFILE@">23.2</token> |
| 5 | 5 |
| 6 <xml name="xrefs"> | 6 <xml name="xrefs"> |
| 7 <xrefs> | 7 <xrefs> |
| 8 <xref type="bio.tools">kaiju</xref> | 8 <xref type="bio.tools">kaiju</xref> |
| 20 <citation type="doi">10.1038/ncomms11257</citation> | 20 <citation type="doi">10.1038/ncomms11257</citation> |
| 21 </citations> | 21 </citations> |
| 22 </xml> | 22 </xml> |
| 23 | 23 |
| 24 <xml name="reference"> | 24 <xml name="reference"> |
| 25 <param name="reference" type="select" label="kaiju refernce data"> | 25 <param name="reference" type="select" label="kaiju reference data"> |
| 26 <options from_data_table="kaiju"/> | 26 <options from_data_table="kaiju"/> |
| 27 <validator type="no_options" message="No reference data installed. Ask your Galaxy admin."/> | 27 <validator type="no_options" message="No reference data installed. Ask your Galaxy admin."/> |
| 28 </param> | 28 </param> |
| 29 </xml> | 29 </xml> |
| 30 | 30 |
| 41 | 41 |
| 42 <xml name="l"> | 42 <xml name="l"> |
| 43 <param argument="-l" type="select" multiple="true" optional="true" label="Print taxon path containing selected ranks ranks specified "> | 43 <param argument="-l" type="select" multiple="true" optional="true" label="Print taxon path containing selected ranks ranks specified "> |
| 44 <option value="domain">Domain</option> | 44 <option value="domain">Domain</option> |
| 45 <option value="realm">Realm</option> | 45 <option value="realm">Realm</option> |
| 46 <option value="superkingdom">Superkingdom</option> | |
| 46 <option value="kingdom">Kingdom</option> | 47 <option value="kingdom">Kingdom</option> |
| 47 <option value="subkingdom">Subkingdom</option> | 48 <option value="subkingdom">Subkingdom</option> |
| 48 <option value="superphylum">Superphylum</option> | 49 <option value="superphylum">Superphylum</option> |
| 49 <option value="phylum">Phylum</option> | 50 <option value="phylum">Phylum</option> |
| 50 <option value="subphylum">Subphylum</option> | 51 <option value="subphylum">Subphylum</option> |