diff count-median.xml @ 7:77410799e8e9 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 7de685f4763d988a5a9abce4a9c2b4714daaf165"
author iuc
date Wed, 18 Dec 2019 16:02:57 -0500
parents 84b323860b0a
children 06d1d91c67e5
line wrap: on
line diff
--- a/count-median.xml	Fri Sep 07 10:59:52 2018 -0400
+++ b/count-median.xml	Wed Dec 18 16:02:57 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="khmer_count_median" name="Count Median" version="@WRAPPER_VERSION@.0">
+<tool id="khmer_count_median" name="khmer: Count Median" version="@WRAPPER_VERSION@@TOOL_VERSION@">
     <description>Count the median/avg k-mer abundance for each sequence</description>
     <macros>
         <token name="@BINARY@">count-median.py</token>
@@ -8,7 +8,7 @@
     <expand macro="stdio" />
     <expand macro="version" />
     <command><![CDATA[
-set -xu &&
+set -u &&
 @BINARY@
 $input_countgraph_filename
 $input_sequence_filename
@@ -21,7 +21,7 @@
     </inputs>
     <outputs>
         <data name="output_summary_filename" format="txt"
-            label="${input_sequence_filename} sequence id, median, average, stddev, and seq length" />
+            label="${tool.name} on ${on_string}" />
     </outputs>
     <tests>
         <test>