diff do-partition.xml @ 9:8388fe31d604 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 238d0992c63de53623c4fc05eec8bd8d67001997
author iuc
date Thu, 03 Oct 2024 13:46:07 +0000
parents 5a0fa29951ae
children
line wrap: on
line diff
--- a/do-partition.xml	Mon Jun 17 11:46:46 2024 +0000
+++ b/do-partition.xml	Thu Oct 03 13:46:07 2024 +0000
@@ -1,10 +1,10 @@
 <tool id="khmer_partition" name="khmer: Sequence partition all-in-one" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>Load, partition, and annotate sequences</description>
-    <expand macro="bio_tools"/>
     <macros>
         <token name="@BINARY@">do-partition.py</token>
         <import>macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <expand macro="stdio" />
     <expand macro="version" />
@@ -24,12 +24,17 @@
         <expand macro="tableinputs" />
     </inputs>
     <outputs>
-        <data name="information" format="txt" from_work_dir="output.info" label="${tool.name} on ${on_string}: summary." />
+        <data name="information" format="txt" from_work_dir="output/output.info" label="${tool.name} on ${on_string}: summary" />
         <expand macro="output_sequences" extension="part"/>
     </outputs>
     <tests>
         <test>
             <param name="inputs" value="random-20-a.fa"/>
+            <output name="information">
+                <assert_contents>
+                    <has_text text="1 subsets total"/>
+                </assert_contents>
+            </output>
             <output_collection name="sequences" type="list">
                 <element name="random-20-a.fa" file="random-20-a.fa.part" />
             </output_collection>