Mercurial > repos > iuc > kleborate
view test-data/Kleborate_results_vanilla.txt @ 3:a7c43271312c draft default tip
planemo upload for repository https://github.com/katholt/Kleborate commit ebbb4da7c0c0176df539f9baa7c9323d9ff5f201
author | iuc |
---|---|
date | Tue, 31 Oct 2023 16:31:44 +0000 |
parents | 383036561810 |
children |
line wrap: on
line source
strain species species_match contig_count N50 largest_contig total_size ambiguous_bases QC_warnings ST virulence_score Yersiniabactin YbST Colibactin CbST Aerobactin AbST Salmochelin SmST RmpADC RmST rmpA2 wzi K_locus Chr_ST gapA infB mdh pgi phoE rpoB tonB ybtS ybtX ybtQ ybtP ybtA irp2 irp1 ybtU ybtT ybtE fyuA clbA clbB clbC clbD clbE clbF clbG clbH clbI clbL clbM clbN clbO clbP clbQ iucA iucB iucC iucD iutA iroB iroC iroD iroN rmpA rmpD rmpC spurious_virulence_hits KP011_S63.scfd unknown 48 50378 86784 922210 yes (425) ambiguous_bases NA 0 - 0 - 0 - 0 - 0 - 0 - wzi114 KL30 (KL2, KL8, KL111) NA - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - KP012_S64.scfd unknown 54 48797 70916 961311 yes (413) ambiguous_bases NA 0 - 0 - 0 - 0 - 0 - 0 - - - NA - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -