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annotate test-data/kobas_identify_output.txt @ 2:2f9619adab91 draft

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author iuc
date Sat, 05 Nov 2016 10:37:44 -0400
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1 Error: configuration file does not exist. Please create the file or provide the options through command line parameters.
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2 ##Databases: KEGG PATHWAY
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3 ##Statistical test method: hypergeometric test / Fisher's exact test
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4 ##FDR correction method: Benjamini and Hochberg
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6 #Term Database ID Input number Background number P-Value Corrected P-Value Input Hyperlink
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7 DNA replication KEGG PATHWAY aaa03030 1 16 0.0282641698768 0.0888413972731 aaa:Acav_0002 http://www.genome.jp/kegg-bin/show_pathway?aaa03030/aaa:Acav_0002%09red
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8 Mismatch repair KEGG PATHWAY aaa03430 1 19 0.0331801935913 0.0888413972731 aaa:Acav_0002 http://www.genome.jp/kegg-bin/show_pathway?aaa03430/aaa:Acav_0002%09red
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9 Homologous recombination KEGG PATHWAY aaa03440 1 22 0.0380748845456 0.0888413972731 aaa:Acav_0002 http://www.genome.jp/kegg-bin/show_pathway?aaa03440/aaa:Acav_0002%09red
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10 Pyrimidine metabolism KEGG PATHWAY aaa00240 1 49 0.0811797932221 0.142064638139 aaa:Acav_0002 http://www.genome.jp/kegg-bin/show_pathway?aaa00240/aaa:Acav_0002%09red
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11 Purine metabolism KEGG PATHWAY aaa00230 1 72 0.11658233175 0.163215264449 aaa:Acav_0002 http://www.genome.jp/kegg-bin/show_pathway?aaa00230/aaa:Acav_0002%09red
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12 Two-component system KEGG PATHWAY aaa02020 1 142 0.217231283042 0.253436496882 aaa:Acav_0001 http://www.genome.jp/kegg-bin/show_pathway?aaa02020/aaa:Acav_0001%09red
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13 Metabolic pathways KEGG PATHWAY aaa01100 1 690 0.719694883569 0.719694883569 aaa:Acav_0002 http://www.genome.jp/kegg-bin/show_pathway?aaa01100/aaa:Acav_0002%09red
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17 #Term Database ID Input number Background number P-Value Corrected P-Value Input Hyperlink
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21 #Term Database ID Input number Background number P-Value Corrected P-Value Input Hyperlink
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