Mercurial > repos > iuc > krakentools_alpha_diversity
diff test-data/beta_bracken_1.tabular @ 0:e400e5ef0e7c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 3dfd5d7d5870695d24d2ede7b321bcaac25e0209
| author | iuc |
|---|---|
| date | Fri, 13 Jan 2023 13:21:35 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/beta_bracken_1.tabular Fri Jan 13 13:21:35 2023 +0000 @@ -0,0 +1,3033 @@ +name taxonomy_id taxonomy_lvl kraken_assigned_reads added_reads new_est_reads fraction_total_reads +[Ruminococcus] gnavus 33038 S 7691179 616234 8307413 0.21418 +[Ruminococcus] torques 33039 S 252163 27407 279570 0.00721 +Anaerostipes hadrus 649756 S 3603595 156551 3760146 0.09695 +Anaerostipes caccae 105841 S 11765 186 11951 0.00031 +Anaerostipes rhamnosivorans 1229621 S 10999 247 11246 0.00029 +Blautia obeum 40520 S 738429 54268 792697 0.02044 +Blautia sp. SC05B48 2479767 S 374191 29634 403825 0.01041 +Blautia sp. NBRC 113351 2877527 S 102408 0 102408 0.00264 +Blautia argi 1912897 S 439939 17711 457650 0.01180 +Blautia massiliensis 1737424 S 285036 0 285036 0.00735 +Blautia hansenii 1322 S 193377 22845 216222 0.00557 +Blautia producta 33035 S 106549 1632 108181 0.00279 +Blautia pseudococcoides 1796616 S 58164 1079503 1137667 0.02933 +Blautia liquoris 2779518 S 17828 85 17913 0.00046 +Coprococcus comes 410072 S 543570 51308 594878 0.01534 +Coprococcus catus 116085 S 203082 18305 221387 0.00571 +Coprococcus sp. ART55/1 751585 S 63068 4154 67222 0.00173 +Coprococcus eutactus 33043 S 23305 0 23305 0.00060 +Anaerobutyricum hallii 39488 S 838713 83291 922004 0.02377 +[Clostridium] scindens 29347 S 222110 10315 232425 0.00599 +[Clostridium] hylemonae 89153 S 77562 46 77608 0.00200 +Lachnoclostridium phocaeense 1871021 S 38261 1534 39795 0.00103 +Lachnoclostridium sp. YL32 1834196 S 36261 18944 55205 0.00142 +Lachnoclostridium phytofermentans 66219 S 6578 12 6590 0.00017 +Dorea longicatena 88431 S 329338 0 329338 0.00849 +Faecalicatena sp. Marseille-Q4148 2823316 S 308410 0 308410 0.00795 +Roseburia intestinalis 166486 S 163275 32843 196118 0.00506 +Roseburia hominis 301301 S 76584 12263 88847 0.00229 +Roseburia sp. NSJ-69 2763062 S 40206 0 40206 0.00104 +Enterocloster bolteae 208479 S 70941 4297 75238 0.00194 +Enterocloster clostridioformis 1531 S 20976 17332 38308 0.00099 +Sellimonas intestinalis 1653434 S 76267 0 76267 0.00197 +Anaerocolumna sedimenticola 2696063 S 10503 662 11165 0.00029 +Anaerocolumna cellulosilytica 433286 S 10306 618 10924 0.00028 +Anaerocolumna chitinilytica 1727145 S 9008 0 9008 0.00023 +Butyrivibrio fibrisolvens 831 S 12755 486 13241 0.00034 +Butyrivibrio proteoclasticus 43305 S 7048 671 7719 0.00020 +Butyrivibrio hungatei 185008 S 6915 790 7705 0.00020 +Lacrimispora sphenoides 29370 S 14521 506 15027 0.00039 +Lacrimispora saccharolytica 84030 S 13000 574 13574 0.00035 +Novisyntrophococcus fermenticellae 2068655 S 21594 0 21594 0.00056 +Lachnospira eligens 39485 S 18953 0 18953 0.00049 +Pseudobutyrivibrio xylanivorans 185007 S 11863 220 12083 0.00031 +Lachnoanaerobaculum umeaense 617123 S 8308 57 8365 0.00022 +Herbinix luporum 1679721 S 3282 594 3876 0.00010 +Anaerotignum propionicum 28446 S 3227 9 3236 0.00008 +Cellulosilyticum sp. WCF-2 2497860 S 357 774 1131 0.00003 +Cellulosilyticum lentocellum 29360 S 349 766 1115 0.00003 +Faecalibacterium prausnitzii 853 S 146424 4697 151121 0.00390 +Ruthenibacterium lactatiformans 1550024 S 30179 350 30529 0.00079 +Vescimonas fastidiosa 2714353 S 22258 0 22258 0.00057 +Vescimonas coprocola 2714355 S 1553 0 1553 0.00004 +Flavonifractor plautii 292800 S 23093 242 23335 0.00060 +Pusillibacter faecalis 2714358 S 13607 0 13607 0.00035 +Ruminococcus bicirculans 1160721 S 3717 83 3800 0.00010 +Ruminococcus albus 1264 S 1129 2 1131 0.00003 +Ruminococcus bovis 2564099 S 972 2 974 0.00003 +Ruminococcus champanellensis 1161942 S 291 3 294 0.00001 +Anaerotruncus colihominis 169435 S 5078 0 5078 0.00013 +Dysosmobacter welbionis 2093857 S 4238 7403 11641 0.00030 +Dysosmobacter sp. Marseille-Q4140 2830675 S 817 0 817 0.00002 +Monoglobus pectinilyticus 1981510 S 3336 98 3434 0.00009 +Solibaculum mannosilyticum 2780922 S 3184 0 3184 0.00008 +Acetivibrio clariflavus 288965 S 1142 266 1408 0.00004 +Acetivibrio saccincola 1677857 S 828 164 992 0.00003 +Acetivibrio thermocellus 1515 S 644 3 647 0.00002 +Acutalibacter muris 1796620 S 2575 5 2580 0.00007 +Ruminiclostridium herbifermentans 2488810 S 1674 368 2042 0.00005 +Ruminiclostridium cellulolyticum 1521 S 442 5 447 0.00001 +Oscillibacter sp. NSJ-62 2763056 S 1637 19 1656 0.00004 +Caproicibacterium lactatifermentans 2666138 S 714 0 714 0.00002 +Caproicibacterium amylolyticum 2766537 S 660 0 660 0.00002 +Caproicibacter fermentans 2576756 S 712 0 712 0.00002 +Pseudoclostridium thermosuccinogenes 84032 S 587 58 645 0.00002 +Mageeibacillus indolicus 884684 S 543 12 555 0.00001 +Thermoclostridium stercorarium 1510 S 456 0 456 0.00001 +Fastidiosipila sanguinis 236753 S 315 11 326 0.00001 +Caproiciproducens sp. NJN-50 2507162 S 213 0 213 0.00001 +Ethanoligenens harbinense 253239 S 190 0 190 0.00000 +Clostridioides difficile 1496 S 244434 16872 261306 0.00674 +Clostridioides sp. ES-S-0054-01 2770780 S 271 0 271 0.00001 +Clostridioides sp. ES-W-0016-02 2770788 S 108 0 108 0.00000 +Clostridioides sp. ES-S-0010-02 2770776 S 20 0 20 0.00000 +Romboutsia ilealis 1115758 S 28712 1018 29730 0.00077 +Romboutsia sp. CE17 2724150 S 2208 70 2278 0.00006 +Romboutsia hominis 1507512 S 1466 39 1505 0.00004 +Terrisporobacter sp. MCA3 2813371 S 8643 0 8643 0.00022 +Peptacetobacter hiranonis 89152 S 6004 56 6060 0.00016 +Filifactor alocis 143361 S 2063 146 2209 0.00006 +Paeniclostridium sordellii 1505 S 1222 11 1233 0.00003 +Peptoclostridium acidaminophilum 1731 S 391 3 394 0.00001 +Tepidibacter sp. 8C15b 2925782 S 226 0 226 0.00001 +Acetoanaerobium sticklandii 1511 S 201 0 201 0.00001 +Eubacterium sp. NSJ-61 2764325 S 159478 8676 168154 0.00434 +Eubacterium sp. c-25 2841037 S 26831 0 26831 0.00069 +Eubacterium sp. MSJ-33 2841528 S 12584 0 12584 0.00032 +Eubacterium callanderi 53442 S 7389 255 7644 0.00020 +Eubacterium limosum 1736 S 6961 319 7280 0.00019 +Eubacterium maltosivorans 2041044 S 5634 881 6515 0.00017 +Acetobacterium sp. KB-1 2184575 S 308 2 310 0.00001 +Acetobacterium woodii 33952 S 249 2 251 0.00001 +Alkalibacter sp. ES005 2815577 S 500 1 501 0.00001 +Clostridium sp. M62/1 411486 S 72022 0 72022 0.00186 +Clostridium sp. SY8519 1042156 S 10969 69 11038 0.00028 +Clostridium sp. C1 1155388 S 2673 0 2673 0.00007 +Clostridium sp. BJN0001 2930219 S 1448 0 1448 0.00004 +Clostridium sp. DL-VIII 641107 S 949 150 1099 0.00003 +Clostridium sp. BNL1100 755731 S 601 2 603 0.00002 +Clostridium sp. JN-9 2507159 S 585 20 605 0.00002 +Clostridium sp. AWRP 2212991 S 580 117 697 0.00002 +Clostridium sp. C5S11 704125 S 568 0 568 0.00001 +Clostridium sp. 'deep sea' 2779445 S 262 0 262 0.00001 +Clostridium sp. JN-1 2483110 S 236 14 250 0.00001 +Clostridium sp. 001 1970093 S 82 0 82 0.00000 +Clostridium perfringens 1502 S 4709 151 4860 0.00013 +Clostridium cadaveris 1529 S 3256 0 3256 0.00008 +Clostridium butyricum 1492 S 2567 116 2683 0.00007 +Clostridium botulinum 1491 S 2102 2634 4736 0.00012 +Clostridium baratii 1561 S 1356 60 1416 0.00004 +Clostridium thermarum 1716543 S 1303 315 1618 0.00004 +Clostridium pasteurianum 1501 S 1274 15 1289 0.00003 +Clostridium manihotivorum 2320868 S 1057 15 1072 0.00003 +Clostridium aceticum 84022 S 967 27 994 0.00003 +Clostridium taeniosporum 394958 S 886 48 934 0.00002 +Clostridium kluyveri 1534 S 690 4 694 0.00002 +Clostridium estertheticum 238834 S 665 18 683 0.00002 +Clostridium saccharobutylicum 169679 S 585 30 615 0.00002 +Clostridium cellulovorans 1493 S 530 5 535 0.00001 +Clostridium bornimense 1216932 S 513 90 603 0.00002 +Clostridium saccharoperbutylacetonicum 36745 S 499 20 519 0.00001 +Clostridium beijerinckii 1520 S 483 651 1134 0.00003 +Clostridium novyi 1542 S 459 74 533 0.00001 +Clostridium drakei 332101 S 440 374 814 0.00002 +Clostridium intestinale 36845 S 411 5 416 0.00001 +Clostridium tyrobutyricum 1519 S 411 6 417 0.00001 +Clostridium septicum 1504 S 400 29 429 0.00001 +Clostridium argentinense 29341 S 384 8 392 0.00001 +Clostridium isatidis 182773 S 347 18 365 0.00001 +Clostridium carboxidivorans 217159 S 306 51 357 0.00001 +Clostridium tetani 1513 S 279 9 288 0.00001 +Clostridium gasigenes 94869 S 272 4 276 0.00001 +Clostridium sporogenes 1509 S 263 1951 2214 0.00006 +Clostridium fermenticellae 2068654 S 258 5 263 0.00001 +Clostridium cochlearium 1494 S 238 12 250 0.00001 +Clostridium acetobutylicum 1488 S 194 0 194 0.00001 +Clostridium formicaceticum 1497 S 151 6 157 0.00000 +Clostridium scatologenes 1548 S 105 87 192 0.00000 +Clostridium chauvoei 46867 S 101 9 110 0.00000 +Clostridium ljungdahlii 1538 S 11 86 97 0.00000 +Hungatella hathewayi 154046 S 10458 13 10471 0.00027 +Crassaminicella sp. 143-21 2855394 S 773 0 773 0.00002 +Crassaminicella thermophila 2599308 S 467 17 484 0.00001 +Crassaminicella profunda 1286698 S 217 0 217 0.00001 +Geosporobacter ferrireducens 1424294 S 1095 26 1121 0.00003 +Paraclostridium bifermentans 1490 S 1010 7 1017 0.00003 +Caloramator sp. E03 2576307 S 915 6 921 0.00002 +Alkaliphilus metalliredigens 208226 S 361 5 366 0.00001 +Alkaliphilus sp. B6464 2731219 S 258 0 258 0.00001 +Alkaliphilus oremlandii 461876 S 185 2 187 0.00000 +Candidatus Arthromitus sp. SFB-rat-Yit 1041504 S 101 198 299 0.00001 +Hathewaya histolytica 1498 S 214 12 226 0.00001 +Sarcina sp. JB2 2726954 S 211 17 228 0.00001 +Serpentinicella alkaliphila 1734049 S 162 0 162 0.00000 +Mogibacterium diversum 114527 S 40830 759 41589 0.00107 +Mogibacterium pumilum 86332 S 2095 22 2117 0.00005 +Emergencia timonensis 1776384 S 4877 0 4877 0.00013 +Aminipila terrae 2697030 S 1075 34 1109 0.00003 +Aminipila butyrica 433296 S 771 28 799 0.00002 +Aminipila luticellarii 2507160 S 479 12 491 0.00001 +Massilistercora timonensis 2086584 S 40222 1357 41579 0.00107 +Intestinimonas butyriciproducens 1297617 S 3241 43 3284 0.00008 +Flintibacter sp. KGMB00164 2610895 S 2493 17 2510 0.00006 +Carboxydocella thermautotrophica 178899 S 61 0 61 0.00000 +Thermaerobacter sp. PB12/4term 2293838 S 52 0 52 0.00000 +Desulfitobacterium hafniense 49338 S 909 76 985 0.00003 +Desulfitobacterium dehalogenans 36854 S 372 24 396 0.00001 +Desulfitobacterium metallireducens 142877 S 301 7 308 0.00001 +Desulfitobacterium dichloroeliminans 233055 S 92 5 97 0.00000 +Desulfosporosinus orientis 1563 S 766 3 769 0.00002 +Desulfosporosinus meridiei 79209 S 195 2 197 0.00001 +Desulfosporosinus youngiae 339862 S 147 0 147 0.00000 +Desulfosporosinus acidiphilus 885581 S 109 0 109 0.00000 +Dehalobacter restrictus 55583 S 184 170 354 0.00001 +Syntrophobotulus glycolicus 51197 S 71 0 71 0.00000 +Vallitalea guaymasensis 1185412 S 1262 0 1262 0.00003 +Vallitalea pronyensis 1348613 S 794 0 794 0.00002 +Petrocella atlantisensis 2173034 S 758 2 760 0.00002 +Candidatus Formimonas warabiya 1761012 S 733 0 733 0.00002 +Desulforamulus reducens 59610 S 193 0 193 0.00000 +Desulforamulus ruminis 1564 S 192 0 192 0.00000 +Desulforamulus ferrireducens 1833852 S 37 3 40 0.00000 +Dehalobacterium formicoaceticum 51515 S 280 12 292 0.00001 +Thermanaerosceptrum fracticalcis 1712410 S 251 6 257 0.00001 +Desulfofarcimen acetoxidans 58138 S 116 0 116 0.00000 +Acididesulfobacillus acetoxydans 1561005 S 115 0 115 0.00000 +Candidatus Desulforudis audaxviator 471827 S 30 0 30 0.00000 +Christensenella minuta 626937 S 1037 12 1049 0.00003 +Christensenella sp. Marseille-P3954 2086585 S 502 6 508 0.00001 +Desulfoscipio gibsoniae 102134 S 1040 3 1043 0.00003 +Thermincola potens 863643 S 158 0 158 0.00000 +Syntrophomonas wolfei 863 S 48 1 49 0.00000 +Candidatus Contubernalis alkalaceticum 338645 S 45 0 45 0.00000 +Candidatus Syntrophocurvum alkaliphilum 2293317 S 28 1 29 0.00000 +Heliorestis convoluta 356322 S 84 0 84 0.00000 +Heliomicrobium modesticaldum 35701 S 10 5 15 0.00000 +Caloranaerobacter azorensis 116090 S 66 1 67 0.00000 +Desulfotomaculum nigrificans 1565 S 59 2 61 0.00000 +Alkalicella caledoniensis 2731377 S 56 0 56 0.00000 +Symbiobacterium thermophilum 2734 S 39 0 39 0.00000 +Caldicellulosiruptor obsidiansis 717609 S 581 155 736 0.00002 +Caldicellulosiruptor diazotrophicus 2806205 S 314 84 398 0.00001 +Caldicellulosiruptor changbaiensis 1222016 S 153 101 254 0.00001 +Caldicellulosiruptor bescii 31899 S 42 41 83 0.00000 +Caldicellulosiruptor saccharolyticus 44001 S 22 12 34 0.00000 +Caldicellulosiruptor kronotskyensis 413889 S 15 12 27 0.00000 +Caldicellulosiruptor acetigenus 301953 S 13 5 18 0.00000 +Thermoanaerobacterium sp. RBIITD 1550240 S 301 44 345 0.00001 +Thermoanaerobacterium thermosaccharolyticum 1517 S 252 105 357 0.00001 +Thermoanaerobacterium xylanolyticum 29329 S 48 6 54 0.00000 +Moorella thermoacetica 1525 S 429 2 431 0.00001 +Moorella glycerini 55779 S 57 0 57 0.00000 +Thermoanaerobacter kivui 2325 S 57 25 82 0.00000 +Thermoanaerobacter wiegelii 46354 S 38 67 105 0.00000 +Thermoanaerobacter siderophilus 106578 S 24 68 92 0.00000 +Caldanaerobacter subterraneus 911092 S 75 2 77 0.00000 +Carboxydothermus hydrogenoformans 129958 S 32 0 32 0.00000 +Thermacetogenium phaeum 85874 S 31 24 55 0.00000 +Zhaonella formicivorans 2528593 S 248 0 248 0.00001 +Mahella australiensis 252966 S 87 26 113 0.00000 +Thermodesulfobium narugense 184064 S 20 0 20 0.00000 +Halanaerobium praevalens 2331 S 338 7 345 0.00001 +Halanaerobium hydrogeniformans 656519 S 102 0 102 0.00000 +Halothermothrix orenii 31909 S 77 1 78 0.00000 +Iocasia fonsfrigidae 2682810 S 29 0 29 0.00000 +Acetohalobium arabaticum 28187 S 204 1 205 0.00001 +Halobacteroides halobius 42422 S 80 1 81 0.00000 +Anoxybacter fermentans 1323375 S 84 1 85 0.00000 +Tepidanaerobacter acetatoxydans 499229 S 271 0 271 0.00001 +Biomaibacter acetigenes 2316383 S 31 0 31 0.00000 +Thermosediminibacter oceani 291990 S 17 0 17 0.00000 +Koleobacter methoxysyntrophicus 2751313 S 106 6 112 0.00000 +Natranaerofaba carboxydovora 2742683 S 52 0 52 0.00000 +Natranaerobius thermophilus 375929 S 18 0 18 0.00000 +Streptococcus thermophilus 1308 S 6673418 256107 6929525 0.17866 +Streptococcus salivarius 1304 S 516033 78259 594292 0.01532 +Streptococcus sp. LPB0220 2610896 S 136912 14210 151122 0.00390 +Streptococcus sp. HSISM1 1316408 S 115888 11461 127349 0.00328 +Streptococcus sp. A12 1759399 S 87857 5688 93545 0.00241 +Streptococcus sp. oral taxon 061 712623 S 17502 367 17869 0.00046 +Streptococcus sp. FDAARGOS_192 1839799 S 16298 6860 23158 0.00060 +Streptococcus sp. oral taxon 431 712633 S 13569 328 13897 0.00036 +Streptococcus sp. HSISS3 1316412 S 6215 2621 8836 0.00023 +Streptococcus sp. HSISS2 1316411 S 5547 2443 7990 0.00021 +Streptococcus sp. 116-D4 2598453 S 3936 181 4117 0.00011 +Streptococcus sp. HSISS1 1316410 S 1996 13485 15481 0.00040 +Streptococcus sp. NPS 308 1902136 S 1406 103 1509 0.00004 +Streptococcus sp. 1643 2576376 S 674 135 809 0.00002 +Streptococcus sp. NSJ-72 2763068 S 594 404 998 0.00003 +Streptococcus sp. oral taxon 064 712624 S 405 187 592 0.00002 +Streptococcus sp. HKU75 2781599 S 392 0 392 0.00001 +Streptococcus sp. CNU 77-61 2684658 S 188 137 325 0.00001 +Streptococcus sp. zg-86 2664091 S 173 4 177 0.00000 +Streptococcus sp. NCTC 11567 2583584 S 151 440 591 0.00002 +Streptococcus sp. FDAARGOS_522 2420310 S 110 1572 1682 0.00004 +Streptococcus sp. CNU G3 2698804 S 84 46 130 0.00000 +Streptococcus sp. CNU G2 2686210 S 46 32 78 0.00000 +Streptococcus sp. DAT741 1940319 S 39 11 50 0.00000 +Streptococcus parasanguinis 1318 S 235892 11876 247768 0.00639 +Streptococcus mitis 28037 S 67792 3995 71787 0.00185 +Streptococcus australis 113107 S 52453 10446 62899 0.00162 +Streptococcus ilei 1156431 S 49706 22004 71710 0.00185 +Streptococcus lactarius 684066 S 23716 0 23716 0.00061 +Streptococcus sanguinis 1305 S 21340 266 21606 0.00056 +Streptococcus oralis 1303 S 20882 1662 22544 0.00058 +Streptococcus koreensis 2382163 S 17535 3867 21402 0.00055 +Streptococcus rubneri 1234680 S 16889 0 16889 0.00044 +Streptococcus pneumoniae 1313 S 15570 5898 21468 0.00055 +Streptococcus anginosus 1328 S 6781 1983 8764 0.00023 +Streptococcus intermedius 1338 S 2713 317 3030 0.00008 +Streptococcus constellatus 76860 S 1878 3384 5262 0.00014 +Streptococcus infantis 68892 S 11594 3465 15059 0.00039 +Streptococcus vestibularis 1343 S 7043 402 7445 0.00019 +Streptococcus gordonii 1302 S 6899 111 7010 0.00018 +Streptococcus cristatus 45634 S 5860 308 6168 0.00016 +Streptococcus gwangjuense 1433513 S 4994 553 5547 0.00014 +Streptococcus pseudopneumoniae 257758 S 3738 438 4176 0.00011 +Streptococcus acidominimus 1326 S 3147 60 3207 0.00008 +Streptococcus suis 1307 S 2876 151 3027 0.00008 +Streptococcus equi 1336 S 1076 14 1090 0.00003 +Streptococcus dysgalactiae 1334 S 809 466 1275 0.00003 +Streptococcus pyogenes 1314 S 1850 24668 26518 0.00068 +Streptococcus mutans 1309 S 1553 68 1621 0.00004 +Streptococcus agalactiae 1311 S 1111 2277 3388 0.00009 +Streptococcus gallolyticus 315405 S 904 1064 1968 0.00005 +Streptococcus canis 1329 S 812 23 835 0.00002 +Streptococcus pasteurianus 197614 S 790 898 1688 0.00004 +Streptococcus lutetiensis 150055 S 761 610 1371 0.00004 +Streptococcus milleri 33040 S 707 338 1045 0.00003 +Streptococcus merionis 400065 S 692 1 693 0.00002 +Streptococcus porcinus 1340 S 676 12 688 0.00002 +Streptococcus pseudoporcinus 361101 S 667 24 691 0.00002 +Streptococcus ruminantium 1917441 S 659 203 862 0.00002 +Streptococcus equinus 1335 S 597 48 645 0.00002 +Streptococcus pluranimalium 82348 S 542 6 548 0.00001 +Streptococcus iniae 1346 S 450 3 453 0.00001 +Streptococcus parasuis 1501662 S 417 0 417 0.00001 +Streptococcus infantarius 102684 S 370 133 503 0.00001 +Streptococcus ratti 1341 S 349 1 350 0.00001 +Streptococcus periodonticum 2490633 S 343 106 449 0.00001 +Streptococcus himalayensis 1888195 S 327 4 331 0.00001 +Streptococcus uberis 1349 S 326 2 328 0.00001 +Streptococcus pantholopis 1811193 S 310 0 310 0.00001 +Streptococcus sobrinus 1310 S 279 1 280 0.00001 +Streptococcus halotolerans 1814128 S 256 1 257 0.00001 +Streptococcus respiraculi 2021971 S 231 2 233 0.00001 +Streptococcus halichoeri 254785 S 211 0 211 0.00001 +Streptococcus chenjunshii 2173853 S 208 0 208 0.00001 +Streptococcus urinalis 149016 S 203 5 208 0.00001 +Streptococcus ferus 1345 S 199 0 199 0.00001 +Streptococcus parauberis 1348 S 178 3 181 0.00000 +Streptococcus troglodytae 1111760 S 108 2 110 0.00000 +Streptococcus marmotae 1825069 S 97 2 99 0.00000 +Streptococcus viridans 78535 S 71 4110 4181 0.00011 +Lactococcus lactis 1358 S 147044 20986 168030 0.00433 +Lactococcus cremoris 1359 S 3894 801 4695 0.00012 +Lactococcus garvieae 1363 S 379 83 462 0.00001 +Lactococcus raffinolactis 1366 S 309 8 317 0.00001 +Lactococcus piscium 1364 S 158 111 269 0.00001 +Lactococcus sp. LG606 2816912 S 69 84 153 0.00000 +Lactococcus sp. LG1074 2816909 S 26 203 229 0.00001 +Lactococcus sp. LG1267 2816910 S 23 108 131 0.00000 +Lactococcus taiwanensis 1151742 S 117 2 119 0.00000 +Lactococcus protaetiae 2592653 S 51 1 52 0.00000 +Lactococcus allomyrinae 2419773 S 15 0 15 0.00000 +Lactococcus paracarnosus 2749962 S 12 162 174 0.00000 +Enterococcus faecium 1352 S 33130 4289 37419 0.00096 +Enterococcus faecalis 1351 S 11427 287 11714 0.00030 +Enterococcus cecorum 44008 S 2123 31 2154 0.00006 +Enterococcus mundtii 53346 S 441 3 444 0.00001 +Enterococcus sp. M190262 2582830 S 204 92 296 0.00001 +Enterococcus sp. FDAARGOS_553 2420313 S 96 154 250 0.00001 +Enterococcus sp. FDAARGOS_375 2060307 S 76 37 113 0.00000 +Enterococcus sp. CR-Ec1 2057791 S 12 4 16 0.00000 +Enterococcus durans 53345 S 350 10 360 0.00001 +Enterococcus avium 33945 S 327 6 333 0.00001 +Enterococcus gallinarum 1353 S 265 165 430 0.00001 +Enterococcus hirae 1354 S 214 4 218 0.00001 +Enterococcus raffinosus 71452 S 139 0 139 0.00000 +Enterococcus casseliflavus 37734 S 124 15 139 0.00000 +Enterococcus lactis 357441 S 100 97 197 0.00001 +Enterococcus gilvus 160453 S 91 1 92 0.00000 +Enterococcus wangshanyuanii 2005703 S 80 0 80 0.00000 +Enterococcus rotai 118060 S 55 0 55 0.00000 +Enterococcus thailandicus 417368 S 34 0 34 0.00000 +Enterococcus saigonensis 1805431 S 16 0 16 0.00000 +Vagococcus carniphilus 218144 S 316 5 321 0.00001 +Vagococcus fluvialis 2738 S 276 0 276 0.00001 +Vagococcus zengguangii 2571750 S 111 2 113 0.00000 +Vagococcus xieshaowenii 2562451 S 108 3 111 0.00000 +Vagococcus penaei 633807 S 80 0 80 0.00000 +Vagococcus lutrae 81947 S 54 0 54 0.00000 +Vagococcus teuberi 519472 S 37 0 37 0.00000 +Vagococcus hydrophili 2714947 S 23 0 23 0.00000 +Vagococcus sp. CY52-2 2925838 S 15 0 15 0.00000 +Vagococcus coleopterorum 2714946 S 12 0 12 0.00000 +Tetragenococcus halophilus 51669 S 138 4 142 0.00000 +Tetragenococcus koreensis 290335 S 92 1 93 0.00000 +Melissococcus plutonius 33970 S 77 0 77 0.00000 +Lactobacillus delbrueckii 1584 S 5663 129 5792 0.00015 +Lactobacillus iners 147802 S 707 13 720 0.00002 +Lactobacillus amylolyticus 83683 S 456 4 460 0.00001 +Lactobacillus johnsonii 33959 S 278 5 283 0.00001 +Lactobacillus helveticus 1587 S 172 42 214 0.00001 +Lactobacillus sp. CBA3606 2099789 S 90 6 96 0.00000 +Lactobacillus sp. wkB8 1545702 S 48 2 50 0.00000 +Lactobacillus acidophilus 1579 S 108 1 109 0.00000 +Lactobacillus ultunensis 227945 S 59 0 59 0.00000 +Lactobacillus paragasseri 2107999 S 55 18 73 0.00000 +Lactobacillus acetotolerans 1600 S 46 0 46 0.00000 +Lactobacillus kefiranofaciens 267818 S 38 122 160 0.00000 +Lactobacillus jensenii 109790 S 36 0 36 0.00000 +Lactobacillus amylovorus 1604 S 32 1 33 0.00000 +Lactobacillus crispatus 47770 S 18 0 18 0.00000 +Lactobacillus terrae 2269374 S 13 0 13 0.00000 +Lactobacillus taiwanensis 508451 S 12 0 12 0.00000 +Lactobacillus gasseri 1596 S 12 6 18 0.00000 +Lacticaseibacillus paracasei 1597 S 5885 1580 7465 0.00019 +Lacticaseibacillus rhamnosus 47715 S 207 2 209 0.00001 +Lacticaseibacillus casei 1582 S 153 38 191 0.00000 +Lacticaseibacillus manihotivorans 88233 S 26 0 26 0.00000 +Latilactobacillus curvatus 28038 S 4384 508 4892 0.00013 +Latilactobacillus sakei 1599 S 298 26 324 0.00001 +Latilactobacillus 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PTS2304 2283194 S 14 8 22 0.00000 +Sporosarcina ureae 1571 S 249 21 270 0.00001 +Sporosarcina ureilytica 298596 S 108 8 116 0.00000 +Jeotgalibacillus malaysiensis 1508404 S 1172 96 1268 0.00003 +Solibacillus silvestris 76853 S 407 79 486 0.00001 +Solibacillus sp. R5-41 2048654 S 185 43 228 0.00001 +Rummeliibacillus stabekisii 241244 S 504 64 568 0.00001 +Ureibacillus thermophilus 367743 S 134 96 230 0.00001 +Ureibacillus thermosphaericus 51173 S 49 70 119 0.00000 +Kurthia sp. 11kri321 1750719 S 101 13 114 0.00000 +Kurthia zopfii 1650 S 21 2 23 0.00000 +Viridibacillus sp. 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CCM 9025 2892440 S 72 0 72 0.00000 +Staphylococcus sp. 17KM0847 2583989 S 15 0 15 0.00000 +Staphylococcus hominis 1290 S 86 17 103 0.00000 +Staphylococcus argenteus 985002 S 84 81 165 0.00000 +Staphylococcus pettenkoferi 170573 S 80 3 83 0.00000 +Staphylococcus warneri 1292 S 78 25 103 0.00000 +Staphylococcus pasteuri 45972 S 61 4 65 0.00000 +Staphylococcus saccharolyticus 33028 S 58 3 61 0.00000 +Staphylococcus carnosus 1281 S 57 3 60 0.00000 +Staphylococcus arlettae 29378 S 57 25 82 0.00000 +Staphylococcus saprophyticus 29385 S 53 5 58 0.00000 +Staphylococcus nepalensis 214473 S 48 1 49 0.00000 +Staphylococcus chromogenes 46126 S 45 2 47 0.00000 +Staphylococcus lugdunensis 28035 S 43 2 45 0.00000 +Staphylococcus haemolyticus 1283 S 42 8 50 0.00000 +Staphylococcus lutrae 155085 S 40 1 41 0.00000 +Staphylococcus hyicus 1284 S 40 2 42 0.00000 +Staphylococcus caprae 29380 S 38 6 44 0.00000 +Staphylococcus condimenti 70255 S 37 1 38 0.00000 +Staphylococcus simulans 1286 S 30 1 31 0.00000 +Staphylococcus succinus 61015 S 27 0 27 0.00000 +Staphylococcus felis 46127 S 27 1 28 0.00000 +Staphylococcus auricularis 29379 S 26 1 27 0.00000 +Staphylococcus debuckii 2044912 S 25 1 26 0.00000 +Staphylococcus pseudoxylosus 2282419 S 23 1 24 0.00000 +Staphylococcus cohnii 29382 S 20 4 24 0.00000 +Staphylococcus gallinarum 1293 S 19 0 19 0.00000 +Staphylococcus roterodami 2699836 S 18 0 18 0.00000 +Staphylococcus muscae 1294 S 17 0 17 0.00000 +Staphylococcus capitis 29388 S 15 3 18 0.00000 +Staphylococcus agnetis 985762 S 15 0 15 0.00000 +Staphylococcus lloydii 2781774 S 13 0 13 0.00000 +Macrococcus armenti 2875764 S 369 0 369 0.00001 +Macrococcus caseolyticus 69966 S 331 138 469 0.00001 +Macrococcus canis 1855823 S 156 37 193 0.00000 +Macrococcus brunensis 198483 S 37 0 37 0.00000 +Jeotgalicoccus sp. WY2 2708346 S 473 0 473 0.00001 +Jeotgalicoccus sp. ATCC 8456 946435 S 15 1 16 0.00000 +Jeotgalicoccus saudimassiliensis 1461582 S 37 1 38 0.00000 +Mammaliicoccus sciuri 1296 S 145 66 211 0.00001 +Mammaliicoccus vitulinus 71237 S 69 35 104 0.00000 +Mammaliicoccus lentus 42858 S 33 24 57 0.00000 +Nosocomiicoccus ampullae 489910 S 164 0 164 0.00000 +Abyssicoccus albus 1817405 S 53 2 55 0.00000 +Salinicoccus halodurans 407035 S 48 1 49 0.00000 +Listeria welshimeri 1643 S 680 103 783 0.00002 +Listeria ivanovii 1638 S 304 18 322 0.00001 +Listeria weihenstephanensis 1006155 S 245 5 250 0.00001 +Listeria monocytogenes 1639 S 220 233 453 0.00001 +Listeria grayi 1641 S 206 8 214 0.00001 +Listeria seeligeri 1640 S 115 13 128 0.00000 +Listeria innocua 1642 S 79 21 100 0.00000 +Listeria sp. PSOL-1 1844999 S 28 1 29 0.00000 +Brochothrix thermosphacta 2756 S 110 4 114 0.00000 +Tumebacillus algifaecis 1214604 S 1267 37 1304 0.00003 +Tumebacillus avium 1903704 S 60 1 61 0.00000 +Effusibacillus dendaii 2743772 S 107 1 108 0.00000 +Alicyclobacillus acidoterrestris 1450 S 52 0 52 0.00000 +Alicyclobacillus acidocaldarius 405212 S 27 0 27 0.00000 +Alicyclobacillus sp. SO9 2665646 S 11 0 11 0.00000 +Kyrpidia tusciae 33943 S 13 1 14 0.00000 +Thermoactinomyces vulgaris 2026 S 246 48 294 0.00001 +Novibacillus thermophilus 1471761 S 51 4 55 0.00000 +Kroppenstedtia eburnea 714067 S 38 2 40 0.00000 +Polycladomyces abyssicola 1125966 S 19 0 19 0.00000 +Sporolactobacillus terrae 269673 S 121 3 124 0.00000 +Erysipelatoclostridium ramosum 1547 S 2841871 12988 2854859 0.07360 +[Clostridium] innocuum 1522 S 49574 1496 51070 0.00132 +Amedibacterium intestinale 2583452 S 508284 31460 539744 0.01392 +Faecalitalea cylindroides 39483 S 21719 2319 24038 0.00062 +Longicatena caecimuris 1796635 S 16358 0 16358 0.00042 +Faecalibacillus intestinalis 1982626 S 9463 2516 11979 0.00031 +Bulleidia sp. zg-1006 2806552 S 1504 13 1517 0.00004 +Intestinibaculum porci 2487118 S 1262 8 1270 0.00003 +Allobaculum mucolyticum 2834459 S 603 0 603 0.00002 +Allobaculum sp. Allo2 2853432 S 223 0 223 0.00001 +Erysipelothrix rhusiopathiae 1648 S 227 50 277 0.00001 +Erysipelothrix piscisicarius 2485784 S 179 55 234 0.00001 +Erysipelothrix sp. HDW6C 2714930 S 115 1 116 0.00000 +Erysipelothrix sp. HDW6B 2714929 S 30 0 30 0.00000 +Erysipelothrix sp. HDW6A 2714928 S 29 0 29 0.00000 +Erysipelothrix larvae 1514105 S 80 1 81 0.00000 +Erysipelothrix inopinata 225084 S 47 0 47 0.00000 +Faecalibaculum rodentium 1702221 S 437 0 437 0.00001 +Turicibacter sp. H121 1712675 S 89471 2737 92208 0.00238 +Turicibacter sp. TJ11 2806443 S 2585 0 2585 0.00007 +Turicibacter sanguinis 154288 S 10372 123 10495 0.00027 +Veillonella atypica 39777 S 4752 161 4913 0.00013 +Veillonella parvula 29466 S 1807 63 1870 0.00005 +Veillonella nakazawae 2682456 S 1415 297 1712 0.00004 +Veillonella sp. S12025-13 2682455 S 750 0 750 0.00002 +Veillonella dispar 39778 S 749 136 885 0.00002 +Veillonella rodentium 248315 S 192 4 196 0.00001 +Megasphaera elsdenii 907 S 1271 24 1295 0.00003 +Megasphaera massiliensis 1232428 S 178 0 178 0.00000 +Megasphaera stantonii 2144175 S 80 1 81 0.00000 +Dialister pneumosintes 39950 S 133 126 259 0.00001 +Dialister massiliensis 2161821 S 70 50 120 0.00000 +Phascolarctobacterium sp. Marseille-Q4147 2823317 S 2414 92 2506 0.00006 +Phascolarctobacterium faecium 33025 S 1141 45 1186 0.00003 +Acidaminococcus intestini 187327 S 684 7 691 0.00002 +Acidaminococcus fermentans 905 S 469 6 475 0.00001 +Selenomonas sp. oral taxon 126 712528 S 99 17 116 0.00000 +Selenomonas sp. oral taxon 136 713030 S 50 98 148 0.00000 +Selenomonas sp. oral taxon 478 712538 S 41 88 129 0.00000 +Selenomonas sp. oral taxon 920 1884263 S 14 1 15 0.00000 +Selenomonas sputigena 69823 S 313 16 329 0.00001 +Selenomonas ruminantium 971 S 279 9 288 0.00001 +Selenomonas timonae 2754044 S 220 55 275 0.00001 +Megamonas funiformis 437897 S 553 41 594 0.00002 +Megamonas hypermegale 158847 S 114 10 124 0.00000 +Pectinatus frisingensis 865 S 663 2 665 0.00002 +Pelosinus sp. UFO1 484770 S 653 8 661 0.00002 +Pelosinus fermentans 365349 S 389 2 391 0.00001 +Methylomusa anaerophila 1930071 S 438 1 439 0.00001 +Sporomusa termitida 2377 S 131 0 131 0.00000 +Parvimonas micra 33033 S 4809 274 5083 0.00013 +Anaerococcus prevotii 33034 S 721 36 757 0.00002 +Anaerococcus vaginalis 33037 S 671 171 842 0.00002 +Anaerococcus obesiensis 1287640 S 583 142 725 0.00002 +Anaerococcus mediterraneensis 1870984 S 97 7 104 0.00000 +Finegoldia magna 1260 S 2236 205 2441 0.00006 +Peptoniphilus harei 54005 S 1054 63 1117 0.00003 +Peptoniphilus ivorii 54006 S 223 2 225 0.00001 +Murdochiella vaginalis 1852373 S 414 25 439 0.00001 +Miniphocaeibacter halophilus 2931922 S 188 0 188 0.00000 +Helcococcus kunzii 40091 S 168 0 168 0.00000 +Tissierella sp. JN-28 2507161 S 724 9 733 0.00002 +Schnuerera ultunensis 45497 S 375 1 376 0.00001 +Gudongella oleilytica 1582259 S 284 3 287 0.00001 +Keratinibaculum paraultunense 1278232 S 88 0 88 0.00000 +Gottschalkia acidurici 1556 S 61 0 61 0.00000 +Ezakiella massiliensis 1852374 S 236 24 260 0.00001 +Sedimentibacter sp. zth1 2816908 S 162 0 162 0.00000 +Ndongobacter massiliensis 1871025 S 106 5 111 0.00000 +endosymbiont 'TC1' of Trimyema compressum 243899 S 21 0 21 0.00000 +Bifidobacterium longum 216816 S 3275573 227112 3502685 0.09031 +Bifidobacterium breve 1685 S 20579 1995 22574 0.00058 +Bifidobacterium catenulatum 1686 S 2468 135 2603 0.00007 +Bifidobacterium adolescentis 1680 S 1686 23 1709 0.00004 +Bifidobacterium saguini 762210 S 713 47 760 0.00002 +Bifidobacterium bifidum 1681 S 707 29 736 0.00002 +Bifidobacterium pseudocatenulatum 28026 S 643 32 675 0.00002 +Bifidobacterium pullorum 78448 S 544 6 550 0.00001 +Bifidobacterium imperatoris 2020965 S 524 35 559 0.00001 +Bifidobacterium scardovii 158787 S 485 1 486 0.00001 +Bifidobacterium lemurum 1603886 S 116 2 118 0.00000 +Bifidobacterium pseudolongum 1694 S 114 0 114 0.00000 +Bifidobacterium dentium 1689 S 100 0 100 0.00000 +Bifidobacterium thermophilum 33905 S 69 0 69 0.00000 +Bifidobacterium angulatum 1683 S 67 0 67 0.00000 +Bifidobacterium animalis 28025 S 61 8 69 0.00000 +Bifidobacterium subtile 77635 S 44 0 44 0.00000 +Bifidobacterium asteroides 1684 S 44 0 44 0.00000 +Bifidobacterium choerinum 35760 S 38 0 38 0.00000 +Bifidobacterium actinocoloniiforme 638619 S 31 0 31 0.00000 +Bifidobacterium eulemuris 1765219 S 26 0 26 0.00000 +Bifidobacterium coryneforme 1687 S 12 1 13 0.00000 +Gardnerella vaginalis 2702 S 154 17 171 0.00000 +Gardnerella leopoldii 2792978 S 143 32 175 0.00000 +Parascardovia denticolens 78258 S 71 0 71 0.00000 +Scardovia inopinata 78259 S 67 0 67 0.00000 +Schaalia odontolytica 1660 S 363394 4307 367701 0.00948 +Schaalia meyeri 52773 S 13055 193 13248 0.00034 +Schaalia sp. 19OD2882 2794089 S 860 0 860 0.00002 +Schaalia sp. ZJ405 2709403 S 383 5 388 0.00001 +Schaalia sp. JY-X169 2758572 S 76 0 76 0.00000 +Schaalia turicensis 131111 S 973 0 973 0.00003 +Schaalia cardiffensis 181487 S 775 6 781 0.00002 +Actinomyces sp. oral taxon 169 712116 S 7388 1374 8762 0.00023 +Actinomyces sp. oral taxon 171 706438 S 5254 291 5545 0.00014 +Actinomyces sp. HMT 175 2789425 S 1927 842 2769 0.00007 +Actinomyces sp. oral taxon 414 712122 S 1109 9 1118 0.00003 +Actinomyces sp. MAS-1 2755559 S 283 0 283 0.00001 +Actinomyces sp. Chiba101 1851395 S 181 5 186 0.00000 +Actinomyces sp. Z16 2079536 S 151 4 155 0.00000 +Actinomyces sp. 432 2057798 S 130 1 131 0.00000 +Actinomyces sp. HMT897 2789424 S 46 38 84 0.00000 +Actinomyces sp. oral taxon 897 2081702 S 43 36 79 0.00000 +Actinomyces pacaensis 1852377 S 15045 68 15113 0.00039 +Actinomyces oris 544580 S 5164 807 5971 0.00015 +Actinomyces naeslundii 1655 S 3269 106 3375 0.00009 +Actinomyces viscosus 1656 S 1047 30 1077 0.00003 +Actinomyces radicidentis 111015 S 296 1 297 0.00001 +Actinomyces howellii 52771 S 234 0 234 0.00001 +Actinomyces respiraculi 2744574 S 234 3 237 0.00001 +Actinomyces faecalis 2722820 S 224 0 224 0.00001 +Actinomyces slackii 52774 S 178 0 178 0.00000 +Actinomyces trachealis 2763540 S 161 2 163 0.00000 +Actinomyces qiguomingii 2057800 S 158 1 159 0.00000 +Actinomyces weissii 675090 S 155 1 156 0.00000 +Actinomyces procaprae 2560010 S 135 3 138 0.00000 +Actinomyces marmotae 2737173 S 112 3 115 0.00000 +Actinomyces wuliandei 2057743 S 104 2 106 0.00000 +Actinomyces gaoshouyii 1960083 S 77 2 79 0.00000 +Actinomyces lilanjuaniae 2321394 S 72 1 73 0.00000 +Pauljensenia hongkongensis 178339 S 3772 33 3805 0.00010 +Fannyhessea vaginae 82135 S 396 0 396 0.00001 +Trueperella pyogenes 1661 S 157 4 161 0.00000 +Trueperella pecoris 2733571 S 99 5 104 0.00000 +Trueperella bialowiezensis 312285 S 43 0 43 0.00000 +Flaviflexus ciconiae 2496867 S 74 1 75 0.00000 +Flaviflexus sp. dk850 2758573 S 54 1 55 0.00000 +Flaviflexus salsibiostraticola 1282737 S 51 3 54 0.00000 +Arcanobacterium haemolyticum 28264 S 57 0 57 0.00000 +Arcanobacterium phocae 131112 S 27 1 28 0.00000 +Arcanobacterium sp. 2701 2722751 S 21 1 22 0.00000 +Arcanobacterium phocisimile 1302235 S 12 0 12 0.00000 +Nanchangia anserum 2692125 S 80 0 80 0.00000 +Actinobaculum sp. 313 2495645 S 56 0 56 0.00000 +Changpingibacter yushuensis 2758440 S 54 0 54 0.00000 +Boudabousia tangfeifanii 1912795 S 37 0 37 0.00000 +Mobiluncus curtisii 2051 S 35 0 35 0.00000 +Actinotignum schaalii 59505 S 28 0 28 0.00000 +Rothia mucilaginosa 43675 S 21213 480 21693 0.00056 +Rothia dentocariosa 2047 S 2453 73 2526 0.00007 +Rothia aeria 172042 S 973 28 1001 0.00003 +Rothia kristinae 37923 S 47 11 58 0.00000 +Rothia nasimurium 85336 S 32 0 32 0.00000 +Rothia amarae 169480 S 26 0 26 0.00000 +Rothia sp. ZJ932 2810516 S 21 0 21 0.00000 +Rothia terrae 396015 S 14 0 14 0.00000 +Arthrobacter sp. 24S4-2 2575374 S 518 130 648 0.00002 +Arthrobacter sp. zg-Y809 2886940 S 69 0 69 0.00000 +Arthrobacter sp. FW306-2-2C-D06B 2879618 S 37 0 37 0.00000 +Arthrobacter sp. FB24 290399 S 35 15 50 0.00000 +Arthrobacter sp. PAMC 25486 1494608 S 29 1 30 0.00000 +Arthrobacter sp. PM3 2017685 S 26 5 31 0.00000 +Arthrobacter sp. Helios 2828862 S 26 0 26 0.00000 +Arthrobacter sp. ERGS1:01 1704044 S 25 2 27 0.00000 +Arthrobacter sp. PGP41 2079227 S 24 2 26 0.00000 +Arthrobacter sp. NicSoilC5 2831000 S 22 0 22 0.00000 +Arthrobacter sp. StoSoilB20 2830995 S 21 0 21 0.00000 +Arthrobacter sp. C1-1 2813727 S 21 0 21 0.00000 +Arthrobacter sp. PAMC25284 2861279 S 19 0 19 0.00000 +Arthrobacter sp. zg-Y462 2886936 S 19 0 19 0.00000 +Arthrobacter sp. StoSoilB13 2830993 S 16 0 16 0.00000 +Arthrobacter sp. StoSoilB5 2830992 S 15 0 15 0.00000 +Arthrobacter sp. FW305-BF8 2879617 S 14 0 14 0.00000 +Arthrobacter sp. UKPF54-2 2600159 S 13 11 24 0.00000 +Arthrobacter sp. QL17 2895818 S 10 0 10 0.00000 +Arthrobacter sp. QXT-31 1357915 S 10 1 11 0.00000 +Arthrobacter crystallopoietes 37928 S 88 3 91 0.00000 +Arthrobacter alpinus 656366 S 79 40 119 0.00000 +Arthrobacter agilis 37921 S 58 1 59 0.00000 +Arthrobacter woluwensis 156980 S 39 1 40 0.00000 +Arthrobacter jiangjiafuii 2817475 S 29 0 29 0.00000 +Arthrobacter sulfonylureivorans 2486855 S 17 0 17 0.00000 +Arthrobacter sunyaminii 2816859 S 17 0 17 0.00000 +Arthrobacter dokdonellae 2211210 S 10 0 10 0.00000 +Kocuria palustris 71999 S 38 4 42 0.00000 +Kocuria sp. TGY1127_2 2711328 S 15 0 15 0.00000 +Kocuria rhizophila 72000 S 24 30 54 0.00000 +Kocuria rosea 1275 S 17 1 18 0.00000 +Kocuria varians 1272 S 15 2 17 0.00000 +Kocuria flava 446860 S 15 1 16 0.00000 +Kocuria indica 1049583 S 15 13 28 0.00000 +Kocuria turfanensis 388357 S 11 1 12 0.00000 +Pseudarthrobacter sp. NIBRBAC000502770 2590785 S 11 10 21 0.00000 +Pseudarthrobacter chlorophenolicus 85085 S 24 12 36 0.00000 +Pseudarthrobacter sulfonivorans 121292 S 18 42 60 0.00000 +Pseudarthrobacter equi 728066 S 15 9 24 0.00000 +Pseudarthrobacter phenanthrenivorans 361575 S 12 2 14 0.00000 +Pseudarthrobacter psychrotolerans 2697569 S 12 4 16 0.00000 +Glutamicibacter mishrai 1775880 S 25 1 26 0.00000 +Glutamicibacter halophytocola 1933880 S 25 1 26 0.00000 +Glutamicibacter protophormiae 37930 S 20 2 22 0.00000 +Glutamicibacter arilaitensis 256701 S 20 3 23 0.00000 +Glutamicibacter nicotianae 37929 S 15 22 37 0.00000 +Glutamicibacter creatinolyticus 162496 S 14 0 14 0.00000 +Paenarthrobacter sp. YJN-5 2735316 S 72 128 200 0.00001 +Micrococcus luteus 1270 S 43 27 70 0.00000 +Sinomonas atrocyanea 37927 S 30 3 33 0.00000 +Paeniglutamicibacter sp. Y32M11 2853258 S 38 0 38 0.00000 +Psychromicrobium lacuslunae 1618207 S 38 0 38 0.00000 +Auritidibacter sp. NML130574 2170745 S 24 0 24 0.00000 +Renibacterium salmoninarum 1646 S 22 0 22 0.00000 +Citricoccus sp. SGAir0253 2567881 S 17 0 17 0.00000 +Nesterenkonia sp. NBAIMH1 2600320 S 15 0 15 0.00000 +Neomicrococcus aestuarii 556325 S 14 0 14 0.00000 +Microbacterium sp. PM5 2014534 S 90 24 114 0.00000 +Microbacterium sp. CBA3102 2603598 S 33 23 56 0.00000 +Microbacterium sp. 1S1 2606451 S 25 48 73 0.00000 +Microbacterium sp. 4R-513 2567934 S 23 4 27 0.00000 +Microbacterium sp. JZ31 1906274 S 23 5 28 0.00000 +Microbacterium sp. BH-3-3-3 1906742 S 23 6 29 0.00000 +Microbacterium sp. ABRD_28 2268461 S 23 2 25 0.00000 +Microbacterium sp. TPU 3598 1938334 S 21 13 34 0.00000 +Microbacterium sp. LKL04 912630 S 17 5 22 0.00000 +Microbacterium sp. Nx66 2766784 S 17 53 70 0.00000 +Microbacterium sp. NIBRBAC000506063 2734618 S 14 0 14 0.00000 +Microbacterium sp. XT11 367477 S 13 3 16 0.00000 +Microbacterium sp. No. 7 1714373 S 12 5 17 0.00000 +Microbacterium sp. Y-01 2048898 S 11 10 21 0.00000 +Microbacterium sp. PAMC22086 2861281 S 10 0 10 0.00000 +Microbacterium lemovicicum 1072463 S 44 9 53 0.00000 +Microbacterium binotii 462710 S 43 0 43 0.00000 +Microbacterium caowuchunii 2614638 S 41 6 47 0.00000 +Microbacterium atlanticum 2782168 S 36 7 43 0.00000 +Microbacterium amylolyticum 936337 S 36 5 41 0.00000 +Microbacterium chocolatum 84292 S 35 8 43 0.00000 +Microbacterium esteraromaticum 57043 S 26 10 36 0.00000 +Microbacterium pygmaeum 370764 S 26 2 28 0.00000 +Microbacterium foliorum 104336 S 25 13 38 0.00000 +Microbacterium hominis 162426 S 23 13 36 0.00000 +Microbacterium oxydans 82380 S 22 20 42 0.00000 +Microbacterium oleivorans 273677 S 20 4 24 0.00000 +Microbacterium schleiferi 69362 S 20 12 32 0.00000 +Microbacterium wangchenii 2541726 S 17 7 24 0.00000 +Microbacterium resistens 156977 S 14 0 14 0.00000 +Microbacterium sediminis 904291 S 14 15 29 0.00000 +Microbacterium oryzae 743009 S 13 2 15 0.00000 +Microbacterium protaetiae 2509458 S 13 2 15 0.00000 +Microbacterium fandaimingii 2708079 S 12 0 12 0.00000 +Microbacterium hydrocarbonoxydans 273678 S 12 4 16 0.00000 +Microbacterium chengjingii 2769067 S 11 0 11 0.00000 +Rhodoluna lacicola 529884 S 266 2 268 0.00001 +Candidatus Rhodoluna planktonica 535712 S 224 2 226 0.00001 +Candidatus Aquiluna sp. UB-MaderosW2red 1855377 S 14 0 14 0.00000 +Aquiluna borgnonia 2499157 S 12 0 12 0.00000 +Leucobacter sp. CX169 2813744 S 47 13 60 0.00000 +Leucobacter sp. Psy1 2875729 S 12 0 12 0.00000 +Leucobacter muris 1935379 S 35 8 43 0.00000 +Leucobacter denitrificans 683042 S 25 3 28 0.00000 +Leucobacter insecticola 2714934 S 16 1 17 0.00000 +Leucobacter viscericola 2714935 S 11 2 13 0.00000 +Rathayibacter sp. VKM Ac-2759 2609252 S 26 9 35 0.00000 +Rathayibacter sp. VKM Ac-2804 2609257 S 24 30 54 0.00000 +Rathayibacter sp. VKM Ac-2760 2609253 S 10 7 17 0.00000 +Rathayibacter iranicus 59737 S 23 2 25 0.00000 +Rathayibacter festucae 110937 S 17 17 34 0.00000 +Rathayibacter rathayi 33887 S 16 3 19 0.00000 +Agromyces laixinhei 2585717 S 31 10 41 0.00000 +Agromyces sp. H17E-10 2932244 S 17 0 17 0.00000 +Agromyces marinus 1389020 S 22 0 22 0.00000 +Agromyces soli 659012 S 13 0 13 0.00000 +Agromyces archimandritae 2781962 S 12 3 15 0.00000 +Agromyces badenianii 2080742 S 11 5 16 0.00000 +Curtobacterium sp. YC1 2795488 S 19 27 46 0.00000 +Curtobacterium sp. L6-1 2841594 S 18 0 18 0.00000 +Curtobacterium sp. BH-2-1-1 1905847 S 11 14 25 0.00000 +Curtobacterium sp. TC1 2862880 S 11 0 11 0.00000 +Curtobacterium sp. TXMA1 2876939 S 10 0 10 0.00000 +Curtobacterium flaccumfaciens 2035 S 14 9 23 0.00000 +Salinibacterium sp. ZJ70 2708084 S 47 15 62 0.00000 +Salinibacterium sp. dk2585 2603292 S 22 3 25 0.00000 +Salinibacterium sp. UTAS2018 2508880 S 12 0 12 0.00000 +Salinibacterium sp. ZJ450 2708338 S 10 1 11 0.00000 +Leifsonia sp. PS1209 2724914 S 14 27 41 0.00000 +Leifsonia sp. ZF2019 2781978 S 13 0 13 0.00000 +Leifsonia xyli 1575 S 33 3 36 0.00000 +Leifsonia shinshuensis 150026 S 15 2 17 0.00000 +Agrococcus sp. 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CA-103260 2802641 S 13 0 13 0.00000 +Prauserella marina 530584 S 13 0 13 0.00000 +Lentzea guizhouensis 1586287 S 12 0 12 0.00000 +Candidatus Planktophila dulcis 1884914 S 246 2 248 0.00001 +Candidatus Planktophila lacus 1884913 S 168 0 168 0.00000 +Candidatus Planktophila vernalis 1884907 S 60 0 60 0.00000 +Candidatus Planktophila sulfonica 1884904 S 58 0 58 0.00000 +Candidatus Planktophila versatilis 1884905 S 56 0 56 0.00000 +Candidatus Planktophila limnetica 573600 S 34 0 34 0.00000 +Candidatus Nanopelagicus abundans 1884916 S 29 0 29 0.00000 +Micromonospora auratinigra 261654 S 39 32 71 0.00000 +Micromonospora carbonacea 47853 S 23 11 34 0.00000 +Micromonospora echinofusca 47858 S 15 8 23 0.00000 +Micromonospora viridifaciens 1881 S 13 8 21 0.00000 +Actinoplanes sp. OR16 946334 S 26 15 41 0.00000 +Actinoplanes missouriensis 1866 S 24 1 25 0.00000 +Actinoplanes friuliensis 196914 S 18 0 18 0.00000 +Actinoplanes derwentensis 113562 S 10 0 10 0.00000 +Catellatospora sp. 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MC19 1967666 S 29 1 30 0.00000 +Cyanobacterium aponinum 379064 S 36 0 36 0.00000 +Allocoleopsis franciscana 2886352 S 56 2 58 0.00000 +Planktothrix rubescens 59512 S 41 4 45 0.00000 +Moorena producens 1155739 S 21 0 21 0.00000 +Kovacikia minuta 2931930 S 204 0 204 0.00001 +Leptothermofonsia sichuanensis 2917832 S 201 0 201 0.00001 +Leptolyngbya sp. 7M 2812896 S 41 0 41 0.00000 +Leptolyngbya sp. NIES-3755 1752064 S 37 0 37 0.00000 +Leptolyngbya boryana 1184 S 15 0 15 0.00000 +Pseudanabaena sp. ABRG5-3 685565 S 92 0 92 0.00000 +Pseudanabaena sp. PCC 7367 82654 S 35 0 35 0.00000 +Synechococcus sp. BIOS-U3-1 1400865 S 54 0 54 0.00000 +Synechococcus sp. CBW1004 1353136 S 46 0 46 0.00000 +Synechococcus sp. NIES-970 1827144 S 41 1 42 0.00000 +Synechococcus sp. ROS8604 1442557 S 39 0 39 0.00000 +Synechococcus sp. RS9902 221345 S 36 8 44 0.00000 +Synechococcus sp. PCC 7002 32049 S 19 9 28 0.00000 +Synechococcus sp. A15-44 1050646 S 17 3 20 0.00000 +Synechococcus sp. CBW1107 2789857 S 10 0 10 0.00000 +Synechocystis sp. CACIAM 05 1933929 S 19 57 76 0.00000 +Prochlorococcus marinus 1219 S 14 10 24 0.00000 +Parasynechococcus marenigrum 2881428 S 21 45 66 0.00000 +Chamaesiphon minutus 1173032 S 29 0 29 0.00000 +Chroococcidiopsis thermalis 54299 S 135 2 137 0.00000 +Gloeobacter violaceus 33072 S 17 0 17 0.00000 +Thermostichus lividus 33070 S 20 0 20 0.00000 +Gloeomargarita lithophora 1188228 S 17 0 17 0.00000 +Mycoplasmopsis glycophila 171285 S 305 2 307 0.00001 +Mycoplasmopsis columboralis 171282 S 293 1 294 0.00001 +Mycoplasmopsis citelli 171281 S 88 0 88 0.00000 +Mycoplasmopsis californica 2113 S 32 0 32 0.00000 +Mycoplasmopsis synoviae 2109 S 16 0 16 0.00000 +Mycoplasmopsis phocirhinis 142650 S 15 0 15 0.00000 +Mycoplasmopsis gallinacea 29556 S 15 0 15 0.00000 +Mycoplasmopsis fermentans 2115 S 11 0 11 0.00000 +Mycoplasmopsis canis 29555 S 11 0 11 0.00000 +Mycoplasmopsis anatis 171279 S 11 0 11 0.00000 +Mycoplasma mycoides 2102 S 108 11 119 0.00000 +Mycoplasma sp. 1654_15 2725994 S 42 1 43 0.00000 +Mycoplasma sp. 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GP 1536648 S 15 0 15 0.00000 +Chloroflexus aggregans 152260 S 94 0 94 0.00000 +Chloroflexus aurantiacus 1108 S 50 0 50 0.00000 +Roseiflexus sp. RS-1 357808 S 33 0 33 0.00000 +Thermobaculum terrenum 166501 S 47 0 47 0.00000 +Pelolinea submarina 913107 S 24 0 24 0.00000 +Anaerolinea thermophila 167964 S 17 0 17 0.00000 +Thermomicrobium roseum 500 S 14 0 14 0.00000 +Candidatus Promineofilum breve 1806508 S 17 0 17 0.00000 +Caldilinea aerophila 133453 S 10 0 10 0.00000 +Deinococcus wulumuqiensis 980427 S 56 3 59 0.00000 +Deinococcus radiodurans 1299 S 15 0 15 0.00000 +Marinithermus hydrothermalis 186192 S 21 0 21 0.00000 +Fimbriimonas ginsengisoli 1005039 S 16 0 16 0.00000 +Klebsiella pneumoniae 573 S 7514 20934 28448 0.00073 +Klebsiella quasipneumoniae 1463165 S 108 233 341 0.00001 +Klebsiella oxytoca 571 S 70 36 106 0.00000 +Klebsiella variicola 244366 S 69 153 222 0.00001 +Klebsiella quasivariicola 2026240 S 62 29 91 0.00000 +Klebsiella aerogenes 548 S 54 8 62 0.00000 +Klebsiella grimontii 2058152 S 41 220 261 0.00001 +Klebsiella huaxiensis 2153354 S 41 7 48 0.00000 +Klebsiella michiganensis 1134687 S 23 76 99 0.00000 +Klebsiella africana 2489010 S 13 3 16 0.00000 +Raoultella ornithinolytica 54291 S 56 51 107 0.00000 +Raoultella planticola 575 S 33 8 41 0.00000 +Escherichia coli 562 S 8651 18141 26792 0.00069 +Escherichia fergusonii 564 S 167 143 310 0.00001 +Escherichia marmotae 1499973 S 93 9 102 0.00000 +Escherichia albertii 208962 S 72 9 81 0.00000 +Citrobacter sp. 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J807 2681307 S 30 149 179 0.00000 +Leclercia sp. 29361 2714951 S 10 5 15 0.00000 +Leclercia pneumoniae 2815358 S 83 4 87 0.00000 +Candidatus Riesia pediculicola 401619 S 285 1 286 0.00001 +Salmonella enterica 28901 S 157 827 984 0.00003 +Cronobacter malonaticus 413503 S 159 17 176 0.00000 +Cronobacter condimenti 1163710 S 40 1 41 0.00000 +Enterobacteriaceae endosymbiont of Donacia sparganii 2675785 S 98 6 104 0.00000 +Enterobacteriaceae endosymbiont of Donacia versicolorea 2675788 S 18 3 21 0.00000 +Candidatus Symbiopectobacterium sp. SyEd1 2871826 S 54 0 54 0.00000 +Candidatus Hamiltonella defensa 138072 S 22 0 22 0.00000 +Candidatus Gullanella endobia 1070130 S 13 0 13 0.00000 +Cedecea neteri 158822 S 88 2 90 0.00000 +Pseudescherichia vulneris 566 S 89 0 89 0.00000 +[Enterobacter] lignolyticus 1334193 S 61 1 62 0.00000 +Pluralibacter gergoviae 61647 S 26 1 27 0.00000 +Kosakonia sp. MUSA4 2067958 S 29 8 37 0.00000 +Kosakonia sacchari 1158459 S 20 4 24 0.00000 +Lelliottia sp. WB101 2153385 S 28 4 32 0.00000 +Lelliottia amnigena 61646 S 15 0 15 0.00000 +Yokenella regensburgei 158877 S 26 1 27 0.00000 +Kluyvera ascorbata 51288 S 14 14 28 0.00000 +Phytobacter ursingii 1972431 S 15 6 21 0.00000 +Shigella flexneri 623 S 11 58 69 0.00000 +Pseudocitrobacter sp. G163CM 2891570 S 10 0 10 0.00000 +Yersinia similis 367190 S 460 52 512 0.00001 +Yersinia rohdei 29485 S 406 38 444 0.00001 +Yersinia enterocolitica 630 S 42 74 116 0.00000 +Yersinia aleksiciae 263819 S 35 6 41 0.00000 +Yersinia aldovae 29483 S 19 2 21 0.00000 +Serratia sp. ATCC 39006 104623 S 119 2 121 0.00000 +Serratia sp. FDAARGOS_506 2420306 S 20 47 67 0.00000 +Serratia liquefaciens 614 S 107 396 503 0.00001 +Serratia fonticola 47917 S 79 78 157 0.00000 +Serratia marcescens 615 S 18 92 110 0.00000 +Serratia plymuthica 82996 S 14 10 24 0.00000 +Rahnella victoriana 1510570 S 107 0 107 0.00000 +Rahnella aquatilis 34038 S 46 59 105 0.00000 +Rouxiella badensis 1646377 S 196 4 200 0.00001 +Nissabacter sp. SGAir0207 2126321 S 54 1 55 0.00000 +Proteus mirabilis 584 S 154 41 195 0.00001 +Proteus hauseri 183417 S 130 15 145 0.00000 +Proteus vulgaris 585 S 103 247 350 0.00001 +Xenorhabdus doucetiae 351671 S 308 14 322 0.00001 +Xenorhabdus budapestensis 290110 S 106 5 111 0.00000 +Xenorhabdus poinarii 40577 S 38 3 41 0.00000 +Providencia sneebia 516075 S 266 9 275 0.00001 +Providencia rustigianii 158850 S 37 4 41 0.00000 +Providencia rettgeri 587 S 35 47 82 0.00000 +Providencia alcalifaciens 126385 S 27 3 30 0.00000 +Providencia heimbachae 333962 S 15 1 16 0.00000 +Morganella morganii 582 S 243 32 275 0.00001 +Arsenophonus nasoniae 638 S 39 145 184 0.00000 +Photorhabdus laumondii 2218628 S 71 7 78 0.00000 +Photorhabdus thracensis 230089 S 22 3 25 0.00000 +Photorhabdus asymbiotica 291112 S 14 0 14 0.00000 +Mixta intestinalis 1615494 S 771 26 797 0.00002 +Mixta theicola 1458355 S 22 0 22 0.00000 +Pantoea sp. Z09 2886821 S 52 0 52 0.00000 +Pantoea sp. CCBC3-3-1 2490851 S 29 12 41 0.00000 +Pantoea sp. At-9b 592316 S 18 16 34 0.00000 +Candidatus Pantoea carbekii 1235990 S 71 0 71 0.00000 +Pantoea agglomerans 549 S 43 189 232 0.00001 +Pantoea cypripedii 55209 S 22 28 50 0.00000 +Pantoea deleyi 470932 S 16 0 16 0.00000 +Erwinia sp. J780 2681984 S 158 4 162 0.00000 +Erwinia sp. E602 2675378 S 25 0 25 0.00000 +Erwinia tracheiphila 65700 S 175 0 175 0.00000 +Candidatus Erwinia haradaeae 1922217 S 43 0 43 0.00000 +Erwinia persicina 55211 S 32 1 33 0.00000 +Buchnera aphidicola 9 S 144 0 144 0.00000 +Pectobacterium atrosepticum 29471 S 380 23 403 0.00001 +Pectobacterium brasiliense 180957 S 155 76 231 0.00001 +Pectobacterium parmentieri 1905730 S 49 5 54 0.00000 +Pectobacterium polaris 2042057 S 20 4 24 0.00000 +Dickeya fangzhongdai 1778540 S 36 626 662 0.00002 +Brenneria goodwinii 1109412 S 141 46 187 0.00000 +Brenneria rubrifaciens 55213 S 41 5 46 0.00000 +Limnobaculum parvum 2172103 S 172 40 212 0.00001 +Pragia fontium 82985 S 18 1 19 0.00000 +Jinshanibacter zhutongyuii 2498113 S 18 3 21 0.00000 +Leminorella richardii 158841 S 15 0 15 0.00000 +Edwardsiella tarda 636 S 21 119 140 0.00000 +Hafnia paralvei 546367 S 18 6 24 0.00000 +Sodalis sp. dw_23 2697027 S 103 0 103 0.00000 +Vibrio aquimaris 2587862 S 643 90 733 0.00002 +Vibrio taketomensis 2572923 S 543 140 683 0.00002 +Vibrio sp. B1FLJ16 2751178 S 248 0 248 0.00001 +Vibrio sp. VB16 2785746 S 143 0 143 0.00000 +Vibrio sp. SS-MA-C1-2 2908646 S 80 0 80 0.00000 +Vibrio sp. OG9-811 2841925 S 37 0 37 0.00000 +Vibrio sp. SCSIO 43132 2779363 S 17 0 17 0.00000 +Vibrio fluvialis 676 S 145 103 248 0.00001 +Vibrio scophthalmi 45658 S 144 198 342 0.00001 +Vibrio parahaemolyticus 670 S 40 39 79 0.00000 +Vibrio natriegens 691 S 17 150 167 0.00000 +Vibrio alginolyticus 663 S 14 231 245 0.00001 +Vibrio harveyi 669 S 12 17 29 0.00000 +Vibrio campbellii 680 S 10 7 17 0.00000 +Vibrio cincinnatiensis 675 S 130 64 194 0.00001 +Vibrio coralliilyticus 190893 S 113 378 491 0.00001 +Vibrio ponticus 265668 S 86 24 110 0.00000 +Vibrio astriarenae 1481923 S 52 11 63 0.00000 +Vibrio penaeicida 104609 S 48 0 48 0.00000 +Vibrio vulnificus 672 S 47 24 71 0.00000 +Vibrio nigripulchritudo 28173 S 41 4 45 0.00000 +Vibrio tubiashii 29498 S 20 5 25 0.00000 +Vibrio sinaloensis 379097 S 11 0 11 0.00000 +Vibrio navarrensis 29495 S 30 53 83 0.00000 +Vibrio neptunius 170651 S 30 0 30 0.00000 +Vibrio splendidus 29497 S 29 50 79 0.00000 +Vibrio tapetis 52443 S 24 3 27 0.00000 +Vibrio aphrogenes 1891186 S 24 4 28 0.00000 +Vibrio cyclitrophicus 47951 S 21 26 47 0.00000 +Vibrio maritimus 990268 S 17 0 17 0.00000 +Vibrio anguillarum 55601 S 17 31 48 0.00000 +Vibrio gazogenes 687 S 15 4 19 0.00000 +Vibrio casei 673372 S 13 7 20 0.00000 +Vibrio cholerae 666 S 13 44 57 0.00000 +Vibrio breoganii 553239 S 11 2 13 0.00000 +Vibrio mediterranei 689 S 11 1 12 0.00000 +Photobacterium damselae 38293 S 150 121 271 0.00001 +Photobacterium ganghwense 320778 S 94 121 215 0.00001 +Photobacterium sp. TLY01 2907534 S 53 0 53 0.00000 +Paraphotobacterium marinum 1755811 S 300 105 405 0.00001 +Salinivibrio kushneri 1908198 S 12 2 14 0.00000 +Pseudomonas mucidolens 46679 S 414 72 486 0.00001 +Pseudomonas fluorescens 294 S 358 466 824 0.00002 +Pseudomonas rhodesiae 76760 S 182 71 253 0.00001 +Pseudomonas tolaasii 29442 S 95 18 113 0.00000 +Pseudomonas protegens 380021 S 52 18 70 0.00000 +Pseudomonas azotoformans 47878 S 27 14 41 0.00000 +Pseudomonas sp. gcc21 2726989 S 184 83 267 0.00001 +Pseudomonas sp. 15A4 2804761 S 106 64 170 0.00000 +Pseudomonas sp. HS-18 2879114 S 54 0 54 0.00000 +Pseudomonas sp. PDNC002 2811422 S 36 25 61 0.00000 +Pseudomonas sp. DR48 2871095 S 32 0 32 0.00000 +Pseudomonas sp. B11D7D 2735906 S 21 10 31 0.00000 +Pseudomonas sp. CMR5c 658630 S 15 34 49 0.00000 +Pseudomonas sp. URMO17WK12:I11 1283291 S 14 37 51 0.00000 +Pseudomonas sp. SCA2728.1_7 2825975 S 13 0 13 0.00000 +Pseudomonas sp. MSPm1 2726956 S 12 7 19 0.00000 +Pseudomonas sp. DG56-2 2320270 S 10 2 12 0.00000 +Pseudomonas syringae 317 S 220 303 523 0.00001 +Pseudomonas chlororaphis 587753 S 175 309 484 0.00001 +Pseudomonas balearica 74829 S 49 41 90 0.00000 +Pseudomonas stutzeri 316 S 45 26 71 0.00000 +Pseudomonas putida 303 S 36 62 98 0.00000 +Pseudomonas fulva 47880 S 14 3 17 0.00000 +Pseudomonas oryzihabitans 47885 S 10 3 13 0.00000 +Pseudomonas reinekei 395598 S 55 16 71 0.00000 +Pseudomonas entomophila 312306 S 51 20 71 0.00000 +Pseudomonas vancouverensis 95300 S 39 11 50 0.00000 +Pseudomonas umsongensis 198618 S 38 10 48 0.00000 +Pseudomonas atacamensis 2565368 S 32 54 86 0.00000 +Pseudomonas alvandae 2842348 S 23 0 23 0.00000 +Pseudomonas mendocina 300 S 10 5 15 0.00000 +Pseudomonas chengduensis 489632 S 20 0 20 0.00000 +Pseudomonas cremoricolorata 157783 S 17 5 22 0.00000 +Pseudomonas xanthosomae 2842356 S 14 0 14 0.00000 +Pseudomonas wenzhouensis 2906062 S 10 0 10 0.00000 +Pseudomonas arsenicoxydans 702115 S 10 2 12 0.00000 +Pseudomonas simiae 321846 S 10 4 14 0.00000 +Halopseudomonas xinjiangensis 487184 S 102 8 110 0.00000 +Thiopseudomonas alkaliphila 1697053 S 68 52 120 0.00000 +Marinobacter sp. NP-4(2019) 2488665 S 52 12 64 0.00000 +Marinobacter nauticus 2743 S 60 50 110 0.00000 +Marinobacter salinus 1874317 S 19 0 19 0.00000 +Halomonas sp. GFAJ-1 1118153 S 103 598 701 0.00002 +Halomonas sp. TD01 999141 S 46 0 46 0.00000 +Halomonas sp. R57-5 1610576 S 20 897 917 0.00002 +Halomonas sp. SF2003 2136172 S 14 24 38 0.00000 +Halomonas piezotolerans 2609667 S 182 2 184 0.00000 +Halomonas chromatireducens 507626 S 39 0 39 0.00000 +Halomonas meridiana 29570 S 38 2 40 0.00000 +Halomonas subglaciescola 29571 S 38 0 38 0.00000 +Halomonas elongata 2746 S 35 0 35 0.00000 +Halomonas huangheensis 1178482 S 34 0 34 0.00000 +Cobetia sp. L2A1 2686360 S 159 36 195 0.00001 +Candidatus Carsonella ruddii 114186 S 138 0 138 0.00000 +Kushneria phosphatilytica 657387 S 30 0 30 0.00000 +Neptunomonas concharum 1031538 S 572 10 582 0.00002 +Neptunomonas japonica 417574 S 36 0 36 0.00000 +Neptunomonas phycophila 1572645 S 10 0 10 0.00000 +Marinomonas profundi 2726122 S 58 0 58 0.00000 +Marinobacterium aestuarii 1821621 S 28 0 28 0.00000 +Bermanella marisrubri 207949 S 26 0 26 0.00000 +Bacterioplanes sanyensis 1249553 S 19 0 19 0.00000 +Reinekea forsetii 1336806 S 541 3 544 0.00001 +Gynuella sunshinyii 1445505 S 46 0 46 0.00000 +Hahella sp. KA22 1628392 S 425 4 429 0.00001 +Hahella chejuensis 158327 S 10 0 10 0.00000 +Ketobacter alkanivorans 1917421 S 28 0 28 0.00000 +Spartinivicinus ruber 2683272 S 22 0 22 0.00000 +Shewanella aestuarii 1028752 S 178 70 248 0.00001 +Shewanella vesiculosa 518738 S 163 0 163 0.00000 +Shewanella livingstonensis 150120 S 157 54 211 0.00001 +Shewanella sp. OM3-2 2908650 S 46 0 46 0.00000 +Shewanella sp. FJAT-53870 2864208 S 31 0 31 0.00000 +Shewanella sp. FDAARGOS_354 1930557 S 12 69 81 0.00000 +Shewanella sp. FJAT-53681 2864205 S 11 0 11 0.00000 +Shewanella oneidensis 70863 S 39 17 56 0.00000 +Shewanella yunxiaonensis 2829809 S 36 0 36 0.00000 +Shewanella khirikhana 1965282 S 32 3 35 0.00000 +Shewanella woodyi 60961 S 17 1 18 0.00000 +Shewanella dokdonensis 712036 S 16 0 16 0.00000 +Shewanella denitrificans 192073 S 16 1 17 0.00000 +Shewanella avicenniae 2814294 S 14 1 15 0.00000 +Shewanella sediminis 271097 S 13 1 14 0.00000 +Shewanella putrefaciens 24 S 10 59 69 0.00000 +Salinimonas sediminis 2303538 S 278 25 303 0.00001 +Salinimonas lutimaris 914153 S 151 26 177 0.00000 +Salinimonas iocasae 2572577 S 80 26 106 0.00000 +Salinimonas marina 2785918 S 37 2 39 0.00000 +Alteromonas sp. 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R2A3 2908648 S 28 0 28 0.00000 +Steroidobacter denitrificans 465721 S 21 1 22 0.00000 +Campylobacter jejuni 197 S 3959 1312 5271 0.00014 +Campylobacter coli 195 S 1011 1472 2483 0.00006 +Campylobacter sp. RM8964 1660074 S 118 0 118 0.00000 +Campylobacter sp. RM6914 1032243 S 49 0 49 0.00000 +Campylobacter sp. CCUG 57310 2517362 S 17 0 17 0.00000 +Campylobacter sp. 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SWIR-19 2878390 S 11 0 11 0.00000 +Sulfurimonas sediminis 2590020 S 101 114 215 0.00001 +Sulfurimonas lithotrophica 2590022 S 79 28 107 0.00000 +Sulfurimonas paralvinellae 317658 S 63 66 129 0.00000 +Sulfurimonas gotlandica 1176482 S 30 23 53 0.00000 +Sulfurimonas denitrificans 39766 S 16 12 28 0.00000 +Sulfuricurvum kujiense 148813 S 20 0 20 0.00000 +Helicobacter suis 104628 S 197 5 202 0.00001 +Helicobacter winghamensis 157268 S 93 1 94 0.00000 +Helicobacter apodemus 135569 S 53 0 53 0.00000 +Helicobacter mustelae 217 S 44 0 44 0.00000 +Helicobacter bilis 37372 S 37 0 37 0.00000 +Helicobacter pylori 210 S 17 0 17 0.00000 +Helicobacter enhydrae 222136 S 15 0 15 0.00000 +Helicobacter canadensis 123841 S 12 0 12 0.00000 +Helicobacter himalayensis 1591088 S 10 0 10 0.00000 +Wolinella succinogenes 844 S 57 0 57 0.00000 +Aliarcobacter butzleri 28197 S 40 0 40 0.00000 +Aliarcobacter faecis 1564138 S 26 1 27 0.00000 +[Arcobacter] porcinus 1935204 S 17 3 20 0.00000 +Aliarcobacter cryaerophilus 28198 S 11 0 11 0.00000 +Aliarcobacter skirrowii 28200 S 11 1 12 0.00000 +Arcobacter venerupis 1054033 S 49 3 52 0.00000 +Arcobacter sp. 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ASN36 2810562 S 391 0 391 0.00001 +Desulfosarcina ovata 83564 S 125 1 126 0.00000 +Desulfosarcina widdelii 947919 S 71 0 71 0.00000 +Desulfonema magnum 45655 S 143 0 143 0.00000 +Desulfonema limicola 45656 S 48 0 48 0.00000 +Desulfobacter hydrogenophilus 2291 S 40 0 40 0.00000 +Desulfobacter postgatei 2293 S 34 0 34 0.00000 +Desulforapulum autotrophicum 2296 S 63 1 64 0.00000 +Desulfobacula toluolica 28223 S 46 0 46 0.00000 +Desulfococcus multivorans 897 S 36 1 37 0.00000 +Desulfosediminicola ganghwensis 2569540 S 312 0 312 0.00001 +Desulfosediminicola flagellatus 2569541 S 161 0 161 0.00000 +Desulfotalea psychrophila 84980 S 39 0 39 0.00000 +Desulfocapsa sulfexigens 65555 S 28 0 28 0.00000 +Desulfurivibrio alkaliphilus 427923 S 62 0 62 0.00000 +Desulfobulbus oralis 1986146 S 36 0 36 0.00000 +Desulfomarina profundi 2772557 S 21 0 21 0.00000 +Geomonas subterranea 2847989 S 494 0 494 0.00001 +Trichlorobacter lovleyi 313985 S 178 2 180 0.00000 +Geotalea uraniireducens 351604 S 152 1 153 0.00000 +Geobacter sp. 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G11 631220 S 29 11 40 0.00000 +Desulfovibrio sulfodismutans 63561 S 30 0 30 0.00000 +Desulfovibrio piger 901 S 13 0 13 0.00000 +Candidatus Desulfovibrio trichonymphae 1725232 S 11 0 11 0.00000 +Maridesulfovibrio salexigens 880 S 208 1 209 0.00001 +Maridesulfovibrio hydrothermalis 191026 S 17 0 17 0.00000 +Lawsonia intracellularis 29546 S 87 0 87 0.00000 +Oceanidesulfovibrio marinus 370038 S 57 0 57 0.00000 +Pseudodesulfovibrio tunisiensis 463192 S 17 0 17 0.00000 +Paradesulfovibrio bizertensis 376490 S 26 0 26 0.00000 +Desulfohalobium retbaense 45663 S 37 0 37 0.00000 +Anaeromyxobacter sp. Fw109-5 404589 S 38 2 40 0.00000 +Anaeromyxobacter sp. Red630 2918171 S 31 0 31 0.00000 +Anaeromyxobacter sp. Red232 2918170 S 30 0 30 0.00000 +Archangium violaceum 83451 S 11 3 14 0.00000 +Cystobacter fuscus 43 S 10 5 15 0.00000 +Sorangium cellulosum 56 S 70 0 70 0.00000 +Pajaroellobacter abortibovis 1882918 S 20 0 20 0.00000 +Syntrophobacter fumaroxidans 119484 S 211 6 217 0.00001 +Desulfoglaeba alkanexedens 361111 S 13 0 13 0.00000 +Desulfomonile tiedjei 2358 S 108 0 108 0.00000 +Syntrophus aciditrophicus 316277 S 21 0 21 0.00000 +Rhizobium binae 1138190 S 129 137 266 0.00001 +Rhizobium sp. NIBRBAC000502774 2590777 S 28 45 73 0.00000 +Rhizobium sp. CIAT894 2020312 S 19 50 69 0.00000 +Rhizobium sp. WYJ-E13 2849093 S 10 0 10 0.00000 +Rhizobium leguminosarum 384 S 24 135 159 0.00000 +Rhizobium bangladeshense 1138189 S 13 7 20 0.00000 +Rhizobium daejeonense 240521 S 11 4 15 0.00000 +Agrobacterium tumefaciens 358 S 49 98 147 0.00000 +Agrobacterium vitis 373 S 45 7 52 0.00000 +Agrobacterium sp. RAC06 1842536 S 40 13 53 0.00000 +Neorhizobium galegae 399 S 20 1 21 0.00000 +Neorhizobium sp. 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SB2 743836 S 317 0 317 0.00001 +Methylocystis rosea 173366 S 29 1 30 0.00000 +Methylocystis heyeri 391905 S 25 2 27 0.00000 +Mesorhizobium sp. DCY119 2108445 S 27 143 170 0.00000 +Phyllobacterium sp. 628 2718938 S 20 7 27 0.00000 +Phyllobacterium sp. T1018 555316 S 18 0 18 0.00000 +Phyllobacterium sp. T1293 555317 S 12 0 12 0.00000 +Nitratireductor sp. SY7 2599600 S 22 16 38 0.00000 +Pseudovibrio sp. FO-BEG1 911045 S 135 12 147 0.00000 +Labrenzia sp. THAF82 2587861 S 31 3 34 0.00000 +Labrenzia sp. VG12 2021862 S 26 3 29 0.00000 +Labrenzia sp. PHM005 2590016 S 17 1 18 0.00000 +Stappia sp. ES.058 1881061 S 36 5 41 0.00000 +Roseibium aggregatum 187304 S 15 3 18 0.00000 +Brucella anthropi 529 S 41 237 278 0.00001 +[Ochrobactrum] quorumnocens 271865 S 33 5 38 0.00000 +Brucella sp. BTU1 2840456 S 16 0 16 0.00000 +Brucella intermedia 94625 S 17 4 21 0.00000 +Pseudochrobactrum sp. XF203 2879116 S 13 0 13 0.00000 +Devosia salina 2860336 S 24 0 24 0.00000 +Paradevosia shaoguanensis 1335043 S 49 51 100 0.00000 +Maritalea myrionectae 454601 S 12 0 12 0.00000 +Candidatus Filomicrobium marinum 1608628 S 56 0 56 0.00000 +Hyphomicrobium sp. MC1 717785 S 11 0 11 0.00000 +Rhodomicrobium vannielii 1069 S 13 0 13 0.00000 +Aureimonas altamirensis 370622 S 27 0 27 0.00000 +Aureimonas populi 1701758 S 16 3 19 0.00000 +Martelella sp. AD-3 686597 S 34 42 76 0.00000 +Xanthobacter autotrophicus 280 S 29 0 29 0.00000 +Labrys sp. KNU-23 2789216 S 29 3 32 0.00000 +Beijerinckia indica 533 S 39 2 41 0.00000 +Methylocella tundrae 227605 S 29 2 31 0.00000 +Methylobacterium currus 2051553 S 10 9 19 0.00000 +Methylorubrum populi 223967 S 11 10 21 0.00000 +Cohaesibacter sp. ES.047 1798205 S 53 3 56 0.00000 +Bosea sp. RAC05 1842539 S 30 6 36 0.00000 +Lichenihabitans psoromatis 2528642 S 36 2 38 0.00000 +Chelatococcus daeguensis 444444 S 22 6 28 0.00000 +Nordella sp. HKS 07 2712222 S 16 0 16 0.00000 +Breoghania sp. L-A4 2304600 S 17 2 19 0.00000 +Komagataeibacter oboediens 65958 S 1283 147 1430 0.00004 +Acetobacter persici 1076596 S 251 6 257 0.00001 +Acetobacter pasteurianus 438 S 30 7 37 0.00000 +Acetobacter sp. KACC 21233 2592655 S 29 1 30 0.00000 +Acetobacter ascendens 481146 S 14 3 17 0.00000 +Acetobacter orientalis 146474 S 12 0 12 0.00000 +Gluconobacter frateurii 38308 S 69 0 69 0.00000 +Gluconobacter albidus 318683 S 35 2 37 0.00000 +Gluconobacter sphaericus 574987 S 23 1 24 0.00000 +Roseomonas haemaphysalidis 2768162 S 27 3 30 0.00000 +Parasaccharibacter sp. TMW 2.1888 2268025 S 34 0 34 0.00000 +Bombella sp. KACC 21507 2697033 S 33 1 34 0.00000 +Swingsia samuiensis 1293412 S 28 1 29 0.00000 +Novacetimonas hansenii 436 S 20 1 21 0.00000 +Granulibacter bethesdensis 364410 S 18 1 19 0.00000 +Gluconacetobacter diazotrophicus 33996 S 10 1 11 0.00000 +Roseococcus microcysteis 2771361 S 10 0 10 0.00000 +Azospirillum thiophilum 528244 S 19 59 78 0.00000 +Skermanella mucosa 1789672 S 25 0 25 0.00000 +Thalassospira indica 1891279 S 70 51 121 0.00000 +Haematospirillum jordaniae 1549855 S 27 2 29 0.00000 +Magnetospirillum magneticum 84159 S 21 2 23 0.00000 +Terasakiella sp. SH-1 2560057 S 37 0 37 0.00000 +Paracoccus sp. S8-55 2903900 S 42 0 42 0.00000 +Paracoccus sp. H4-D09 2812658 S 13 31 44 0.00000 +Paracoccus denitrificans 266 S 29 111 140 0.00000 +Paracoccus sanguinis 1545044 S 22 36 58 0.00000 +Paracoccus yeei 147645 S 10 199 209 0.00001 +Rhodobacter sp. N10 2807096 S 420 0 420 0.00001 +Aestuarium zhoushanense 2820523 S 215 0 215 0.00001 +Paroceanicella profunda 2579971 S 18 4 22 0.00000 +Pikeienuella piscinae 2748098 S 17 0 17 0.00000 +Tritonibacter mobilis 379347 S 15 2 17 0.00000 +Brevirhabdus pacifica 1267768 S 10 3 13 0.00000 +Sulfitobacter dubius 218673 S 63 0 63 0.00000 +Sulfitobacter sp. THAF37 2587855 S 12 18 30 0.00000 +Sulfitobacter mediterraneus 83219 S 21 33 54 0.00000 +Mameliella alba 561184 S 92 17 109 0.00000 +Jannaschia sp. CCS1 290400 S 88 1 89 0.00000 +Ketogulonicigenium robustum 92947 S 52 7 59 0.00000 +Ketogulonicigenium vulgare 92945 S 13 3 16 0.00000 +Roseovarius sp. SCSIO 43702 2823043 S 10 0 10 0.00000 +Falsihalocynthiibacter arcticus 1579316 S 32 1 33 0.00000 +Leisingera methylohalidivorans 133924 S 16 1 17 0.00000 +Ruegeria sp. AD91A 2293862 S 15 1 16 0.00000 +Roseobacter ponti 1891787 S 20 0 20 0.00000 +Roseibacterium elongatum 159346 S 19 1 20 0.00000 +Yangia pacifica 311180 S 10 1 11 0.00000 +Sphingomonas melonis 152682 S 117 141 258 0.00001 +Sphingomonas sp. CL5.1 2653203 S 18 9 27 0.00000 +Sphingomonas sp. S2-65 2903960 S 13 0 13 0.00000 +Sphingomonas sediminicola 386874 S 20 1 21 0.00000 +Sphingomonas paeninsulae 2319844 S 12 0 12 0.00000 +Sphingobium sp. RAC03 1843368 S 24 4 28 0.00000 +Sphingobium sp. EP60837 1855519 S 16 3 19 0.00000 +Sphingobium sp. YG1 2082188 S 14 14 28 0.00000 +Sphingobium fuliginis 336203 S 30 140 170 0.00000 +Novosphingobium resinovorum 158500 S 135 231 366 0.00001 +Novosphingobium sp. Gsoil 351 2675225 S 31 1 32 0.00000 +Novosphingobium pentaromativorans 205844 S 37 37 74 0.00000 +Parasphingopyxis sp. CP4 2724527 S 153 5 158 0.00000 +Parasphingorhabdus sp. 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BL5 1714860 S 224 7 231 0.00001 +Sinomicrobium sp. HD2P242 2900738 S 225 0 225 0.00001 +Constantimarinum furrinae 2562285 S 191 11 202 0.00001 +Maribacter dokdonensis 320912 S 41 123 164 0.00000 +Maribacter hydrothermalis 1836467 S 11 0 11 0.00000 +Winogradskyella sp. PC-19 754417 S 98 28 126 0.00000 +Winogradskyella sediminis 1382466 S 25 6 31 0.00000 +Winogradskyella helgolandensis 2697010 S 12 1 13 0.00000 +Aequorivita sp. H23M31 2494375 S 31 9 40 0.00000 +Aequorivita sublithincola 101385 S 24 31 55 0.00000 +Nonlabens marinus 930802 S 27 11 38 0.00000 +Nonlabens dokdonensis 328515 S 24 7 31 0.00000 +Cellulophaga lytica 979 S 42 6 48 0.00000 +Cellulophaga sp. L1A9 2686362 S 24 9 33 0.00000 +Tenacibaculum sp. SZ-18 754423 S 12 43 55 0.00000 +Croceibacter atlanticus 313588 S 71 11 82 0.00000 +Myroides odoratus 256 S 38 6 44 0.00000 +Myroides phaeus 702745 S 12 3 15 0.00000 +Muricauda aurantiaca 1383885 S 25 0 25 0.00000 +Muricauda sp. 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TRM1-10 2027857 S 11 0 11 0.00000 +Algibacter sp. L3A6 2686366 S 10 2 12 0.00000 +Chryseobacterium sp. SC2-2 2929800 S 450 0 450 0.00001 +Chryseobacterium sp. F4 2852098 S 286 0 286 0.00001 +Chryseobacterium sp. LJ668 2864040 S 173 0 173 0.00000 +Chryseobacterium sp. T16E-39 2015076 S 118 12 130 0.00000 +Chryseobacterium sp. G0186 2487064 S 106 65 171 0.00000 +Chryseobacterium sp. DH-B6 2759528 S 99 0 99 0.00000 +Chryseobacterium sp. G0162 2487063 S 94 134 228 0.00001 +Chryseobacterium sp. Y16C 2920939 S 78 0 78 0.00000 +Chryseobacterium sp. POL2 2713414 S 78 28 106 0.00000 +Chryseobacterium sp. 1871047 S 62 42 104 0.00000 +Chryseobacterium sp. MEBOG06 2879938 S 59 0 59 0.00000 +Chryseobacterium sp. IHB B 17019 1721091 S 21 2 23 0.00000 +Chryseobacterium sp. StRB126 878220 S 16 5 21 0.00000 +Chryseobacterium sp. SNU WT5 2594269 S 14 3 17 0.00000 +Chryseobacterium sp. G0201 2487065 S 12 4 16 0.00000 +Chryseobacterium sp. 3008163 2478663 S 12 2 14 0.00000 +Chryseobacterium sp. MEBOG07 2879939 S 11 0 11 0.00000 +Chryseobacterium gallinarum 1324352 S 853 145 998 0.00003 +Chryseobacterium camelliae 1265445 S 602 185 787 0.00002 +Chryseobacterium indoltheticum 254 S 233 39 272 0.00001 +Chryseobacterium nepalense 1854498 S 190 0 190 0.00000 +Chryseobacterium arthrosphaerae 651561 S 84 27 111 0.00000 +Chryseobacterium indologenes 253 S 66 17 83 0.00000 +Chryseobacterium gleum 250 S 63 56 119 0.00000 +Chryseobacterium carnipullorum 1124835 S 40 13 53 0.00000 +Chryseobacterium lactis 1241981 S 32 15 47 0.00000 +Chryseobacterium cucumeris 1813611 S 30 5 35 0.00000 +Chryseobacterium salivictor 2547600 S 28 1 29 0.00000 +Chryseobacterium manosquense 2754694 S 23 17 40 0.00000 +Chryseobacterium balustinum 246 S 11 3 14 0.00000 +Chryseobacterium taklimakanense 536441 S 10 2 12 0.00000 +Kaistella antarctica 266748 S 113 19 132 0.00000 +Kaistella sp. 97-N-M2 2908645 S 10 0 10 0.00000 +Elizabethkingia miricola 172045 S 333 394 727 0.00002 +Elizabethkingia ursingii 1756150 S 81 24 105 0.00000 +Elizabethkingia meningoseptica 238 S 58 3 61 0.00000 +Elizabethkingia anophelis 1117645 S 36 59 95 0.00000 +Apibacter raozihei 2500547 S 480 6 486 0.00001 +Ornithobacterium rhinotracheale 28251 S 242 37 279 0.00001 +Cloacibacterium caeni 2004710 S 149 0 149 0.00000 +Riemerella anatipestifer 34085 S 44 3 47 0.00000 +Empedobacter stercoris 1628248 S 35 4 39 0.00000 +Cruoricaptor ignavus 1118202 S 35 4 39 0.00000 +Bergeyella cardium 1585976 S 15 1 16 0.00000 +Blattabacterium cuenoti 1653831 S 275 166 441 0.00001 +Crocinitomix sp. GM2_3_6_6 2862509 S 53 0 53 0.00000 +Pedobacter sp. Q8-18 2895286 S 487 0 487 0.00001 +Pedobacter sp. KBS0701 2578106 S 60 1 61 0.00000 +Pedobacter sp. PACM 27299 1727164 S 39 0 39 0.00000 +Pedobacter sp. SW-16 2766984 S 13 0 13 0.00000 +Pedobacter steynii 430522 S 474 2 476 0.00001 +Pedobacter aquae 2605747 S 432 3 435 0.00001 +Pedobacter heparinus 984 S 196 0 196 0.00001 +Pedobacter ginsengisoli 363852 S 82 0 82 0.00000 +Pedobacter schmidteae 2201271 S 33 0 33 0.00000 +Pedobacter roseus 336820 S 29 0 29 0.00000 +Pedobacter cryoconitis 188932 S 13 0 13 0.00000 +Sphingobacterium sp. DR205 2713573 S 424 29 453 0.00001 +Sphingobacterium sp. ML3W 1538644 S 78 7 85 0.00000 +Sphingobacterium sp. dk4302 2662364 S 45 3 48 0.00000 +Sphingobacterium sp. CZ-2 2557994 S 40 11 51 0.00000 +Sphingobacterium sp. UDSM-2020 2795738 S 15 1 16 0.00000 +Sphingobacterium daejeonense 371142 S 424 106 530 0.00001 +Sphingobacterium spiritivorum 258 S 298 102 400 0.00001 +Sphingobacterium lactis 797291 S 56 17 73 0.00000 +Sphingobacterium mizutaii 1010 S 40 3 43 0.00000 +Sphingobacterium hotanense 649196 S 11 1 12 0.00000 +Sphingobacterium psychroaquaticum 561061 S 10 0 10 0.00000 +Mucilaginibacter gotjawali 1550579 S 222 0 222 0.00001 +Mucilaginibacter xinganensis 1234841 S 148 0 148 0.00000 +Mucilaginibacter sp. 14171R-50 2703789 S 52 0 52 0.00000 +Mucilaginibacter rubeus 2027860 S 29 33 62 0.00000 +Mucilaginibacter paludis 423351 S 28 0 28 0.00000 +Mucilaginibacter mali 2740462 S 28 0 28 0.00000 +Mucilaginibacter ginkgonis 2682091 S 11 0 11 0.00000 +Mucilaginibacter celer 2305508 S 10 0 10 0.00000 +Solitalea sp. 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HL-130-GSB 1974213 S 19 0 19 0.00000 +Chlorobaculum limnaeum 274537 S 44 0 44 0.00000 +Chloroherpeton thalassium 100716 S 27 0 27 0.00000 +Melioribacter roseus 1134405 S 215 0 215 0.00001 +Ignavibacterium album 591197 S 34 0 34 0.00000 +Fibrobacter succinogenes 833 S 366 0 366 0.00001 +Gemmatimonas phototrophica 1379270 S 151 0 151 0.00000 +Candidatus Cloacimonas acidaminovorans 456827 S 13 0 13 0.00000 +Akkermansia muciniphila 239935 S 9193 5 9198 0.00024 +Luteolibacter ambystomatis 2824561 S 36 0 36 0.00000 +Luteolibacter luteus 2728835 S 35 0 35 0.00000 +Roseimicrobium sp. ORNL1 2711231 S 10 0 10 0.00000 +Methylacidiphilum sp. IT6 2795386 S 225 1 226 0.00001 +Methylacidiphilum infernorum 511746 S 28 0 28 0.00000 +Oleiharenicola sp. 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OMZ 838 1539298 S 14 0 14 0.00000 +Treponema socranskii 53419 S 37 0 37 0.00000 +Sphaerochaeta pleomorpha 1131707 S 184 1 185 0.00000 +Sphaerochaeta coccoides 273376 S 137 1 138 0.00000 +Sphaerochaeta associata 1129264 S 21 0 21 0.00000 +Sphaerochaeta globosa 1131703 S 15 0 15 0.00000 +Oceanispirochaeta crateris 2518645 S 111 1 112 0.00000 +Sediminispirochaeta smaragdinae 55206 S 38 0 38 0.00000 +Thiospirochaeta perfilievii 252967 S 35 0 35 0.00000 +Salinispira pacifica 1307761 S 17 0 17 0.00000 +Borrelia puertoricensis 2756107 S 41 0 41 0.00000 +Borrelia sp. BU AG58 2887345 S 12 0 12 0.00000 +Breznakiella homolactica 2798577 S 28 0 28 0.00000 +Brachyspira hampsonii 1287055 S 612 36 648 0.00002 +Brachyspira hyodysenteriae 159 S 219 13 232 0.00001 +Brachyspira pilosicoli 52584 S 217 1 218 0.00001 +Brachyspira murdochii 84378 S 39 2 41 0.00000 +Leptospira kmetyi 408139 S 262 5 267 0.00001 +Leptospira biflexa 172 S 94 0 94 0.00000 +Leptospira tipperaryensis 2564040 S 68 0 68 0.00000 +Leptospira santarosai 28183 S 50 1 51 0.00000 +Leptospira noguchii 28182 S 44 0 44 0.00000 +Leptospira mayottensis 1137606 S 29 4 33 0.00000 +Leptospira borgpetersenii 174 S 16 1 17 0.00000 +Leptospira weilii 28184 S 12 1 13 0.00000 +Nanosynbacter sp. HMT-352 2899133 S 7031 0 7031 0.00018 +Candidatus Nanosynbacter sp. HMT352 2902423 S 790 0 790 0.00002 +Candidatus Nanosynbacter lyticus 2093824 S 109 267 376 0.00001 +Candidatus Nanosynbacter featherlites 2572088 S 46 0 46 0.00000 +Candidatus Minimicrobia vallesae 2841264 S 606 0 606 0.00002 +Fusobacterium nucleatum 851 S 2526 158 2684 0.00007 +Fusobacterium gonidiaformans 849 S 538 5 543 0.00001 +Fusobacterium ulcerans 861 S 336 4 340 0.00001 +Fusobacterium necrophorum 859 S 307 2 309 0.00001 +Fusobacterium gastrosuis 1755100 S 87 0 87 0.00000 +Fusobacterium hwasookii 1583098 S 61 8 69 0.00000 +Fusobacterium varium 856 S 47 0 47 0.00000 +Fusobacterium pseudoperiodonticum 2663009 S 46 3 49 0.00000 +Fusobacterium sp. NSJ-57 2764326 S 25 0 25 0.00000 +Fusobacterium sp. oral taxon 203 671211 S 13 1 14 0.00000 +Fusobacterium mortiferum 850 S 23 0 23 0.00000 +Ilyobacter polytropus 167642 S 415 1 416 0.00001 +Cetobacterium somerae 188913 S 73 0 73 0.00000 +Leptotrichia sp. oral taxon 218 712361 S 93 0 93 0.00000 +Leptotrichia sp. oral taxon 498 712368 S 46 13 59 0.00000 +Leptotrichia sp. oral taxon 847 1785996 S 39 8 47 0.00000 +Leptotrichia sp. oral taxon 221 712362 S 32 0 32 0.00000 +Leptotrichia sp. oral taxon 212 712357 S 30 1 31 0.00000 +Leptotrichia buccalis 40542 S 123 20 143 0.00000 +Leptotrichia wadei 157687 S 120 20 140 0.00000 +Leptotrichia hofstadii 157688 S 88 18 106 0.00000 +Leptotrichia hongkongensis 554406 S 68 13 81 0.00000 +Leptotrichia trevisanii 109328 S 46 5 51 0.00000 +Leptotrichia shahii 157691 S 29 6 35 0.00000 +Sebaldella termitidis 826 S 707 1 708 0.00002 +Streptobacillus moniliformis 34105 S 389 11 400 0.00001 +Pseudoleptotrichia goodfellowii 157692 S 150 1 151 0.00000 +Sneathia vaginalis 187101 S 11 0 11 0.00000 +Thermotoga sp. 2812B 1157948 S 25 196 221 0.00001 +Thermotoga maritima 2336 S 26 559 585 0.00002 +Thermotoga caldifontis 1508419 S 16 0 16 0.00000 +Pseudothermotoga thermarum 119394 S 106 29 135 0.00000 +Fervidobacterium nodosum 2424 S 30 8 38 0.00000 +Fervidobacterium pennivorans 93466 S 27 21 48 0.00000 +Thermosipho africanus 2421 S 49 8 57 0.00000 +Kosmotoga olearia 651457 S 490 13 503 0.00001 +Mesotoga infera 1236046 S 22 0 22 0.00000 +Mesotoga prima 1184387 S 13 0 13 0.00000 +Defluviitoga tunisiensis 1006576 S 75 2 77 0.00000 +Desulfurobacterium thermolithotrophum 64160 S 744 0 744 0.00002 +Thermosulfidibacter takaii 412593 S 65 0 65 0.00000 +Thermocrinis albus 136094 S 47 0 47 0.00000 +Aquifex aeolicus 63363 S 10 0 10 0.00000 +Persephonella marina 309805 S 11 0 11 0.00000 +Aminobacterium colombiense 81468 S 558 0 558 0.00001 +Cloacibacillus porcorum 1197717 S 65 0 65 0.00000 +Fretibacterium fastidiosum 651822 S 65 0 65 0.00000 +Thermovirga lienii 336261 S 31 0 31 0.00000 +Thermanaerovibrio velox 108007 S 22 0 22 0.00000 +Pyramidobacter piscolens 638849 S 17 0 17 0.00000 +Jonquetella anthropi 428712 S 11 0 11 0.00000 +Leptospirillum sp. 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WH15 2602070 S 10 0 10 0.00000 +Granulicella mallensis 940614 S 10 0 10 0.00000 +Edaphobacter sp. 12200R-103 2703788 S 16 0 16 0.00000 +Candidatus Koribacter versatilis 658062 S 10 0 10 0.00000 +Chloracidobacterium aggregatum 2851959 S 44 0 44 0.00000 +Thermodesulfobacterium commune 1741 S 113 1 114 0.00000 +Denitrovibrio acetiphilus 118000 S 69 0 69 0.00000 +Calditerrivibrio nitroreducens 477976 S 29 0 29 0.00000 +Geovibrio thiophilus 139438 S 15 0 15 0.00000 +Desulfurispirillum indicum 936456 S 110 0 110 0.00000 +Endomicrobium proavitum 1408281 S 38 0 38 0.00000 +Candidatus Endomicrobium trichonymphae 1408204 S 11 0 11 0.00000 +Elusimicrobium minutum 423605 S 45 0 45 0.00000 +Dictyoglomus thermophilum 14 S 33 3 36 0.00000 +Caldithrix abyssi 187145 S 29 0 29 0.00000 +Caldisericum exile 693075 S 12 0 12 0.00000 +Homo sapiens 9606 S 3944 126 4070 0.00010 +Saccharomyces cerevisiae 4932 S 2554 0 2554 0.00007 +Saccharomyces paradoxus 27291 S 29 0 29 0.00000 +Saccharomyces eubayanus 1080349 S 12 0 12 0.00000 +Torulaspora delbrueckii 4950 S 280 0 280 0.00001 +Naumovozyma castellii 27288 S 102 0 102 0.00000 +Kluyveromyces lactis 28985 S 47 0 47 0.00000 +Zygotorulaspora mrakii 42260 S 45 0 45 0.00000 +Tetrapisispora phaffii 113608 S 12 0 12 0.00000 +Sugiyamaella lignohabitans 796027 S 10 0 10 0.00000 +Fusarium fujikuroi 5127 S 45 0 45 0.00000 +Fusarium verticillioides 117187 S 14 0 14 0.00000 +Fusarium pseudograminearum 101028 S 31 0 31 0.00000 +Drechmeria coniospora 98403 S 22 0 22 0.00000 +Pyricularia oryzae 318829 S 74 0 74 0.00000 +Talaromyces rugulosus 121627 S 74 0 74 0.00000 +Aspergillus puulaauensis 1220207 S 17 0 17 0.00000 +Schizosaccharomyces pombe 4896 S 38 0 38 0.00000 +Rhizoctonia solani 456999 S 133 0 133 0.00000 +Marasmius oreades 181124 S 12 0 12 0.00000 +Plasmodium vinckei 5860 S 62 0 62 0.00000 +Plasmodium relictum 85471 S 53 0 53 0.00000 +Plasmodium malariae 5858 S 31 0 31 0.00000 +Plasmodium reichenowi 5854 S 15 0 15 0.00000 +Neospora caninum 29176 S 34 0 34 0.00000 +Toxoplasma gondii 5811 S 23 0 23 0.00000 +Besnoitia besnoiti 94643 S 15 0 15 0.00000 +Phaeodactylum tricornutum 2850 S 124 0 124 0.00000 +Dictyostelium discoideum 44689 S 56 0 56 0.00000 +Methanosalsum zhilinae 39669 S 409 25 434 0.00001 +Methanosarcina lacustris 170861 S 237 10 247 0.00001 +Methanosarcina thermophila 2210 S 10 0 10 0.00000 +Methanolobus zinderi 536044 S 165 6 171 0.00000 +Methanococcoides sp. LMO-1 2822137 S 112 0 112 0.00000 +Methanococcoides methylutens 2226 S 36 2 38 0.00000 +Methanohalophilus mahii 2176 S 19 18 37 0.00000 +Methanocorpusculum labreanum 83984 S 144 0 144 0.00000 +Methanospirillum hungatei 2203 S 13 0 13 0.00000 +Methanoplanus limicola 2315 S 11 0 11 0.00000 +Methanofollis liminatans 2201 S 11 0 11 0.00000 +Methanoregula formicica 882104 S 20 0 20 0.00000 +Haladaptatus pallidirubidus 1008152 S 46 0 46 0.00000 +Natranaeroarchaeum sulfidigenum 2784880 S 16 0 16 0.00000 +Halomicrobium sp. LC1Hm 2610902 S 27 36 63 0.00000 +Halosiccatus urmianus 1586233 S 31 0 31 0.00000 +Haloterrigena longa 370324 S 43 48 91 0.00000 +Methanobrevibacter millerae 230361 S 31 0 31 0.00000 +Methanobrevibacter ruminantium 83816 S 30 13 43 0.00000 +Methanobrevibacter arboriphilus 39441 S 13 0 13 0.00000 +Methanobacterium paludis 868131 S 27 1 28 0.00000 +Methanobacterium lacus 877455 S 11 0 11 0.00000 +Methanocaldococcus sp. FS406-22 644281 S 37 12 49 0.00000 +Methanococcus maripaludis 39152 S 13 5 18 0.00000 +Archaeoglobus profundus 84156 S 31 0 31 0.00000 +Sulfurisphaera ohwakuensis 69656 S 56 18 74 0.00000 +Stygiolobus azoricus 41675 S 14 0 14 0.00000 +Acidilobus sp. 7A 1577685 S 10 0 10 0.00000 +Candidatus Nitrosotalea okcheonensis 1903276 S 27 0 27 0.00000 +Picrophilus torridus 82076 S 114 0 114 0.00000 +uncultured crAssphage 1211417 S 402471 0 402471 0.01038 +CrAss-like virus sp. 2831617 S 70247 0 70247 0.00181 +crAssphage cr110_1 2772070 S 95 0 95 0.00000 +Lactococcus phage P335 354260 S 533 103 636 0.00002 +Streptococcus phage PH15 537874 S 34 0 34 0.00000 +Lactococcus phage TP901-1 35345 S 19 9 28 0.00000 +Lactococcus phage 28201 1871678 S 13 4 17 0.00000 +Lactococcus phage 63301 1871687 S 10 16 26 0.00000 +Lactococcus phage ul36 114416 S 10 4 14 0.00000 +Lentavirus PMBT5 2734244 S 31 0 31 0.00000 +Sandinevirus BK5T 2845191 S 17 4 21 0.00000 +Streptococcus phage EJ-1 12402 S 39 1 40 0.00000 +Lettuce infectious yellows virus 31713 S 31 0 31 0.00000 +Megavirus chiliensis 1094892 S 21 0 21 0.00000