Mercurial > repos > iuc > krakentools_alpha_diversity
view test-data/extract_kraken_reads/kraken2.report @ 4:bab112ba9d62 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit f37828f1d6b9c53cc2e7ea334ee9a2fb8dbd8711
| author | iuc |
|---|---|
| date | Tue, 20 Jun 2023 20:04:12 +0000 |
| parents | 9d0330e23bfd |
| children |
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4.29 24 24 U 0 unclassified 95.71 536 0 R 1 root 95.00 532 0 D 10239 Viruses 88.75 497 0 D1 2731341 Duplodnaviria 88.75 497 0 D2 2731360 Heunggongvirae 88.75 497 0 P 2731361 Peploviricota 88.75 497 0 C 2731363 Herviviricetes 88.75 497 0 O 548681 Herpesvirales 88.75 497 0 F 10292 Herpesviridae 88.75 497 0 F1 10293 Alphaherpesvirinae 88.75 497 0 G 180255 Iltovirus 88.75 497 497 S 10386 Gallid alphaherpesvirus 1 6.25 35 0 D1 2559587 Riboviria 6.25 35 0 K 2732396 Orthornavirae 6.25 35 0 P 2497569 Negarnaviricota 6.25 35 0 P1 2497570 Haploviricotina 6.25 35 0 C 2497574 Monjiviricetes 6.25 35 0 O 11157 Mononegavirales 6.25 35 0 F 11158 Paramyxoviridae 6.25 35 12 G 260963 Avulavirus 2.68 15 0 G1 336096 unclassified Avulavirus 2.68 15 15 S 204987 Goose paramyxovirus SF02 1.25 7 7 S 11176 Avian avulavirus 1 0.18 1 1 S 1305716 Avian avulavirus 12 0.71 4 0 R1 131567 cellular organisms 0.36 2 0 D 2 Bacteria 0.36 2 0 P 1224 Proteobacteria 0.36 2 0 C 1236 Gammaproteobacteria 0.36 2 0 O 72274 Pseudomonadales 0.36 2 0 F 468 Moraxellaceae 0.36 2 0 G 469 Acinetobacter 0.36 2 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.36 2 2 S 470 Acinetobacter baumannii 0.36 2 0 D 2759 Eukaryota 0.18 1 0 D1 33154 Opisthokonta 0.18 1 0 K 33208 Metazoa 0.18 1 0 K1 6072 Eumetazoa 0.18 1 0 K2 33213 Bilateria 0.18 1 0 K3 33511 Deuterostomia 0.18 1 0 P 7711 Chordata 0.18 1 0 P1 89593 Craniata 0.18 1 0 P2 7742 Vertebrata 0.18 1 0 P3 7776 Gnathostomata 0.18 1 0 P4 117570 Teleostomi 0.18 1 0 P5 117571 Euteleostomi 0.18 1 0 P6 8287 Sarcopterygii 0.18 1 0 P7 1338369 Dipnotetrapodomorpha 0.18 1 0 P8 32523 Tetrapoda 0.18 1 0 P9 32524 Amniota 0.18 1 0 C 40674 Mammalia 0.18 1 0 C1 32525 Theria 0.18 1 0 C2 9347 Eutheria 0.18 1 0 C3 1437010 Boreoeutheria 0.18 1 0 C4 314146 Euarchontoglires 0.18 1 0 O 9443 Primates 0.18 1 0 O1 376913 Haplorrhini 0.18 1 0 O2 314293 Simiiformes 0.18 1 0 O3 9526 Catarrhini 0.18 1 0 O4 314295 Hominoidea 0.18 1 0 F 9604 Hominidae 0.18 1 0 F1 207598 Homininae 0.18 1 0 G 9605 Homo 0.18 1 1 S 9606 Homo sapiens 0.18 1 0 D1 2698737 Sar 0.18 1 0 D2 33630 Alveolata 0.18 1 0 P 5794 Apicomplexa 0.18 1 0 C 422676 Aconoidasida 0.18 1 0 O 5819 Haemosporida 0.18 1 0 F 1639119 Plasmodiidae 0.18 1 0 G 5820 Plasmodium 0.18 1 0 G1 418103 Plasmodium (Plasmodium) 0.18 1 0 S 5850 Plasmodium knowlesi 0.18 1 1 S1 5851 Plasmodium knowlesi strain H