Mercurial > repos > iuc > krakentools_extract_kraken_reads
view test-data/output.tabular @ 0:519e0835abd7 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 92c58a65005708fbd56b27b86969c01a1258ddb9
| author | iuc |
|---|---|
| date | Wed, 15 Mar 2023 18:18:27 +0000 |
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| children |
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513 Unclassified 7 k__Eukaryota 0 k__Eukaryota p__Chordata 0 k__Eukaryota p__Chordata c__Mammalia 0 k__Eukaryota p__Chordata c__Mammalia o__Primates 0 k__Eukaryota p__Chordata c__Mammalia o__Primates f__Hominidae 0 k__Eukaryota p__Chordata c__Mammalia o__Primates f__Hominidae g__Homo 402 k__Eukaryota p__Chordata c__Mammalia o__Primates f__Hominidae g__Homo s__Homo_sapiens 0 k__Eukaryota p__Ascomycota 0 k__Eukaryota p__Ascomycota c__Saccharomycetes 1 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales 3 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Saccharomycetaceae 11 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Saccharomycetaceae g__Saccharomyces 293 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Saccharomycetaceae g__Saccharomyces s__Saccharomyces_cerevisiae 15 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Saccharomycetaceae g__Saccharomyces s__Saccharomyces_paradoxus 10 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Saccharomycetaceae g__Saccharomyces s__Saccharomyces_eubayanus 0 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Saccharomycetaceae g__Kluyveromyces 1 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Saccharomycetaceae g__Kluyveromyces s__Kluyveromyces_marxianus 0 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Trichomonascaceae 0 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Trichomonascaceae g__Sugiyamaella 1 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Trichomonascaceae g__Sugiyamaella s__Sugiyamaella_lignohabitans 0 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Debaryomycetaceae 0 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Debaryomycetaceae g__Candida 1 k__Eukaryota p__Ascomycota c__Saccharomycetes o__Saccharomycetales f__Debaryomycetaceae g__Candida s__Candida_dubliniensis 1 k__Eukaryota p__Ascomycota c__Sordariomycetes 0 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Sordariales 0 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Sordariales f__Sordariaceae 0 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Sordariales f__Sordariaceae g__Neurospora 1 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Sordariales f__Sordariaceae g__Neurospora s__Neurospora_crassa 0 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Magnaporthales 0 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Magnaporthales f__Pyriculariaceae 0 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Magnaporthales f__Pyriculariaceae g__Pyricularia 1 k__Eukaryota p__Ascomycota c__Sordariomycetes o__Magnaporthales f__Pyriculariaceae g__Pyricularia s__Pyricularia_pennisetigena 0 k__Eukaryota p__Ascomycota c__Eurotiomycetes 0 k__Eukaryota p__Ascomycota c__Eurotiomycetes o__Eurotiales 0 k__Eukaryota p__Ascomycota c__Eurotiomycetes o__Eurotiales f__Aspergillaceae 0 k__Eukaryota p__Ascomycota c__Eurotiomycetes o__Eurotiales f__Aspergillaceae g__Aspergillus 1 k__Eukaryota p__Ascomycota c__Eurotiomycetes o__Eurotiales f__Aspergillaceae g__Aspergillus s__Aspergillus_luchuensis 0 k__Eukaryota p__Ascomycota c__Schizosaccharomycetes 0 k__Eukaryota p__Ascomycota c__Schizosaccharomycetes o__Schizosaccharomycetales 0 k__Eukaryota p__Ascomycota c__Schizosaccharomycetes o__Schizosaccharomycetales f__Schizosaccharomycetaceae 0 k__Eukaryota p__Ascomycota c__Schizosaccharomycetes o__Schizosaccharomycetales f__Schizosaccharomycetaceae g__Schizosaccharomyces 1 k__Eukaryota p__Ascomycota c__Schizosaccharomycetes o__Schizosaccharomycetales f__Schizosaccharomycetaceae g__Schizosaccharomyces s__Schizosaccharomyces_pombe 0 k__Eukaryota p__Apicomplexa 0 k__Eukaryota p__Apicomplexa c__Aconoidasida 0 k__Eukaryota p__Apicomplexa c__Aconoidasida o__Haemosporida 0 k__Eukaryota p__Apicomplexa c__Aconoidasida o__Haemosporida f__Plasmodiidae 0 k__Eukaryota p__Apicomplexa c__Aconoidasida o__Haemosporida f__Plasmodiidae g__Plasmodium 1 k__Eukaryota p__Apicomplexa c__Aconoidasida o__Haemosporida f__Plasmodiidae g__Plasmodium s__Plasmodium_vivax 1 k__Eukaryota p__Apicomplexa c__Aconoidasida o__Haemosporida f__Plasmodiidae g__Plasmodium s__Plasmodium_malariae 1 k__Eukaryota p__Apicomplexa c__Aconoidasida o__Haemosporida f__Plasmodiidae g__Plasmodium s__Plasmodium_coatneyi 1 k__Eukaryota p__Apicomplexa c__Aconoidasida o__Haemosporida f__Plasmodiidae g__Plasmodium s__Plasmodium_chabaudi 0 k__Eukaryota p__Apicomplexa c__Conoidasida 0 k__Eukaryota p__Apicomplexa c__Conoidasida o__Eucoccidiorida 0 k__Eukaryota p__Apicomplexa c__Conoidasida o__Eucoccidiorida f__Cryptosporidiidae 0 k__Eukaryota p__Apicomplexa c__Conoidasida o__Eucoccidiorida f__Cryptosporidiidae g__Cryptosporidium 1 k__Eukaryota p__Apicomplexa c__Conoidasida o__Eucoccidiorida f__Cryptosporidiidae g__Cryptosporidium s__Cryptosporidium_parvum 0 k__Eukaryota p__Evosea 0 k__Eukaryota p__Evosea c__Eumycetozoa 0 k__Eukaryota p__Evosea c__Eumycetozoa o__Dictyosteliales 0 k__Eukaryota p__Evosea c__Eumycetozoa o__Dictyosteliales f__Dictyosteliaceae 0 k__Eukaryota p__Evosea c__Eumycetozoa o__Dictyosteliales f__Dictyosteliaceae g__Dictyostelium 1 k__Eukaryota p__Evosea c__Eumycetozoa o__Dictyosteliales f__Dictyosteliaceae g__Dictyostelium s__Dictyostelium_discoideum 3 k__Bacteria 0 k__Bacteria p__Firmicutes 0 k__Bacteria p__Firmicutes c__Clostridia 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Clostridiaceae 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Clostridiaceae g__Clostridium 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Clostridiaceae g__Clostridium s__Clostridium_sp._MF28 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Clostridiaceae g__Clostridium s__Clostridium_pasteurianum 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Clostridiaceae g__Clostridium s__Clostridium_carboxidivorans 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Peptostreptococcaceae 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Peptostreptococcaceae g__Clostridioides 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Peptostreptococcaceae g__Clostridioides s__Clostridioides_difficile 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Lachnospiraceae 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Lachnospiraceae g__Lachnoclostridium 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Lachnospiraceae g__Lachnoclostridium s__[Clostridium]_hylemonae 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Oscillospiraceae 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Oscillospiraceae g__Monoglobus 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Oscillospiraceae g__Monoglobus s__Monoglobus_pectinilyticus 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Eubacteriales_Family_XIII._Incertae_Sedis 0 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Eubacteriales_Family_XIII._Incertae_Sedis g__Mogibacterium 1 k__Bacteria p__Firmicutes c__Clostridia o__Eubacteriales f__Eubacteriales_Family_XIII._Incertae_Sedis g__Mogibacterium s__Mogibacterium_pumilum 0 k__Bacteria p__Firmicutes c__Bacilli 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Bacillaceae 2 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Bacillaceae g__Bacillus 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Bacillaceae g__Halobacillus 1 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Bacillaceae g__Halobacillus s__Halobacillus_litoralis 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Staphylococcaceae 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Staphylococcaceae g__Staphylococcus 1 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Staphylococcaceae g__Staphylococcus s__Staphylococcus_saccharolyticus 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Staphylococcaceae g__Jeotgalicoccus 1 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Staphylococcaceae g__Jeotgalicoccus s__Jeotgalicoccus_saudimassiliensis 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Paenibacillaceae 0 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Paenibacillaceae g__Paenibacillus 1 k__Bacteria p__Firmicutes c__Bacilli o__Bacillales f__Paenibacillaceae g__Paenibacillus s__Paenibacillus_azoreducens 0 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales 0 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae 0 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Lactococcus 1 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Streptococcaceae g__Lactococcus s__Lactococcus_lactis 0 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae 0 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Weissella 1 k__Bacteria p__Firmicutes c__Bacilli o__Lactobacillales f__Lactobacillaceae g__Weissella s__Weissella_paramesenteroides 0 k__Bacteria p__Tenericutes 0 k__Bacteria p__Tenericutes c__Mollicutes 0 k__Bacteria p__Tenericutes c__Mollicutes o__Mycoplasmatales 0 k__Bacteria p__Tenericutes c__Mollicutes o__Mycoplasmatales f__Mycoplasmataceae 0 k__Bacteria p__Tenericutes c__Mollicutes o__Mycoplasmatales f__Mycoplasmataceae g__Mycoplasma 1 k__Bacteria p__Tenericutes c__Mollicutes o__Mycoplasmatales f__Mycoplasmataceae g__Mycoplasma s__Mycoplasma_sp._Ms02 0 k__Bacteria p__Tenericutes o__Mycoplasmoidales 0 k__Bacteria p__Tenericutes o__Mycoplasmoidales f__Metamycoplasmataceae 0 k__Bacteria p__Tenericutes o__Mycoplasmoidales f__Metamycoplasmataceae g__Metamycoplasma 1 k__Bacteria p__Tenericutes o__Mycoplasmoidales f__Metamycoplasmataceae g__Metamycoplasma s__Metamycoplasma_phocicerebrale 0 k__Bacteria p__Cyanobacteria 0 k__Bacteria p__Cyanobacteria o__Chroococcales 0 k__Bacteria p__Cyanobacteria o__Chroococcales f__Chroococcaceae 0 k__Bacteria p__Cyanobacteria o__Chroococcales f__Chroococcaceae g__Chondrocystis 1 k__Bacteria p__Cyanobacteria o__Chroococcales f__Chroococcaceae g__Chondrocystis s__Chondrocystis_sp._NIES-4102 0 k__Bacteria p__Proteobacteria 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Enterobacteriaceae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Enterobacteriaceae g__Escherichia 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Enterobacteriaceae g__Escherichia s__Escherichia_coli 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Enterobacteriaceae g__Citrobacter 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Enterobacteriaceae g__Citrobacter s__Citrobacter_sp._RHBSTW-00599 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Erwiniaceae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Erwiniaceae g__Erwinia 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Erwiniaceae g__Erwinia s__Candidatus_Erwinia_haradaeae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Erwiniaceae g__Buchnera 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Erwiniaceae g__Buchnera s__Buchnera_aphidicola 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Yersiniaceae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Yersiniaceae g__Rahnella 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Yersiniaceae g__Rahnella s__Rahnella_aquatilis 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Morganellaceae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Morganellaceae g__Photorhabdus 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Enterobacterales f__Morganellaceae g__Photorhabdus s__Photorhabdus_asymbiotica 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Thiotrichales 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Thiotrichales f__Francisellaceae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Thiotrichales f__Francisellaceae g__Francisella 5 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Thiotrichales f__Francisellaceae g__Francisella s__Francisella_halioticida 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria g__Candidatus_Nardonella 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria g__Candidatus_Nardonella s__endosymbiont_of_Sipalinus_gigas 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Vibrionales 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Vibrionales f__Vibrionaceae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Vibrionales f__Vibrionaceae g__Vibrio 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Vibrionales f__Vibrionaceae g__Vibrio s__Vibrio_azureus 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae 0 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Aggregatibacter 1 k__Bacteria p__Proteobacteria c__Gammaproteobacteria o__Pasteurellales f__Pasteurellaceae g__Aggregatibacter s__Aggregatibacter_sp._oral_taxon_513 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Burkholderiales 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Burkholderiaceae 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Burkholderiaceae g__Cupriavidus 1 k__Bacteria p__Proteobacteria c__Betaproteobacteria o__Burkholderiales f__Burkholderiaceae g__Cupriavidus s__Cupriavidus_basilensis 0 k__Bacteria p__Proteobacteria c__Betaproteobacteria g__Candidatus_Kinetoplastibacterium 1 k__Bacteria p__Proteobacteria c__Betaproteobacteria g__Candidatus_Kinetoplastibacterium s__Candidatus_Kinetoplastibacterium_crithidii 0 k__Bacteria p__Proteobacteria c__Epsilonproteobacteria 0 k__Bacteria p__Proteobacteria c__Epsilonproteobacteria o__Campylobacterales 0 k__Bacteria p__Proteobacteria c__Epsilonproteobacteria o__Campylobacterales f__Campylobacteraceae 0 k__Bacteria p__Proteobacteria c__Epsilonproteobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter 2 k__Bacteria p__Proteobacteria c__Epsilonproteobacteria o__Campylobacterales f__Campylobacteraceae g__Campylobacter s__Campylobacter_hepaticus 0 k__Bacteria p__Bacteroidetes 0 k__Bacteria p__Bacteroidetes c__Flavobacteriia 0 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales 0 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Blattabacteriaceae 0 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Blattabacteriaceae g__Blattabacterium 1 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Blattabacteriaceae g__Blattabacterium s__Blattabacterium_cuenoti 0 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Flavobacteriaceae 1 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Flavobacteriaceae g__Olleya 0 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Weeksellaceae 0 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Weeksellaceae g__Chryseobacterium 1 k__Bacteria p__Bacteroidetes c__Flavobacteriia o__Flavobacteriales f__Weeksellaceae g__Chryseobacterium s__Chryseobacterium_sp._DH-B6 0 k__Bacteria p__Bacteroidetes c__Bacteroidia 2 k__Bacteria p__Bacteroidetes c__Bacteroidia o__Bacteroidales 0 k__Bacteria p__Bacteroidetes c__Sphingobacteriia 0 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales 0 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Sphingobacteriaceae 0 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Sphingobacteriaceae g__Sphingobacterium 1 k__Bacteria p__Bacteroidetes c__Sphingobacteriia o__Sphingobacteriales f__Sphingobacteriaceae g__Sphingobacterium s__Sphingobacterium_multivorum 0 k__Bacteria p__Bacteroidetes c__Cytophagia 0 k__Bacteria p__Bacteroidetes c__Cytophagia o__Cytophagales 0 k__Bacteria p__Bacteroidetes c__Cytophagia o__Cytophagales f__Flammeovirgaceae 0 k__Bacteria p__Bacteroidetes c__Cytophagia o__Cytophagales f__Flammeovirgaceae g__Flammeovirga 1 k__Bacteria p__Bacteroidetes c__Cytophagia o__Cytophagales f__Flammeovirgaceae g__Flammeovirga s__Flammeovirga_kamogawensis 0 k__Bacteria p__Fusobacteria 0 k__Bacteria p__Fusobacteria c__Fusobacteriia 0 k__Bacteria p__Fusobacteria c__Fusobacteriia o__Fusobacteriales 0 k__Bacteria p__Fusobacteria c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae 0 k__Bacteria p__Fusobacteria c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium 1 k__Bacteria p__Fusobacteria c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium s__Fusobacterium_nucleatum 1 k__Bacteria p__Fusobacteria c__Fusobacteriia o__Fusobacteriales f__Fusobacteriaceae g__Fusobacterium s__Fusobacterium_hwasookii 0 k__Bacteria p__Spirochaetes 0 k__Bacteria p__Spirochaetes c__Spirochaetia 0 k__Bacteria p__Spirochaetes c__Spirochaetia o__Brachyspirales 0 k__Bacteria p__Spirochaetes c__Spirochaetia o__Brachyspirales f__Brachyspiraceae 0 k__Bacteria p__Spirochaetes c__Spirochaetia o__Brachyspirales f__Brachyspiraceae g__Brachyspira 1 k__Bacteria p__Spirochaetes c__Spirochaetia o__Brachyspirales f__Brachyspiraceae g__Brachyspira s__Brachyspira_hyodysenteriae 0 k__Archaea 0 k__Archaea p__Euryarchaeota 0 k__Archaea p__Euryarchaeota c__Methanomicrobia 0 k__Archaea p__Euryarchaeota c__Methanomicrobia o__Methanosarcinales 0 k__Archaea p__Euryarchaeota c__Methanomicrobia o__Methanosarcinales f__Methanosarcinaceae 0 k__Archaea p__Euryarchaeota c__Methanomicrobia o__Methanosarcinales f__Methanosarcinaceae g__Methanosarcina 1 k__Archaea p__Euryarchaeota c__Methanomicrobia o__Methanosarcinales f__Methanosarcinaceae g__Methanosarcina s__Methanosarcina_barkeri 0 k__Archaea p__Thaumarchaeota 0 k__Archaea p__Thaumarchaeota c__Nitrososphaeria 0 k__Archaea p__Thaumarchaeota c__Nitrososphaeria o__Nitrososphaerales 0 k__Archaea p__Thaumarchaeota c__Nitrososphaeria o__Nitrososphaerales f__Nitrososphaeraceae 0 k__Archaea p__Thaumarchaeota c__Nitrososphaeria o__Nitrososphaerales f__Nitrososphaeraceae g__Candidatus_Nitrosocosmicus