Mercurial > repos > iuc > krakentools_kreport2krona
diff test-data/beta_kreport_3.tabular @ 0:bc508fe30940 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit 3dfd5d7d5870695d24d2ede7b321bcaac25e0209
| author | iuc |
|---|---|
| date | Fri, 13 Jan 2023 13:22:07 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/beta_kreport_3.tabular Fri Jan 13 13:22:07 2023 +0000 @@ -0,0 +1,3695 @@ + 0.39 106031 106031 0 0 U 0 unclassified + 99.61 26893437 64507 1477437790 4229124 R 1 root + 99.37 26828910 53 1467438279 4198954 R1 131567 cellular organisms + 99.37 26828361 441146 1466288112 4174203 D 2 Bacteria + 91.96 24827889 44318 1283698682 2079098 D1 1783272 Terrabacteria group + 91.79 24782417 164270 1279926117 2060362 P 1239 Firmicutes + 91.15 24610130 1009510 1265588084 1930928 C 91061 Bacilli + 87.24 23554641 134265 1180431285 1861547 O 186826 Lactobacillales + 86.31 23304329 22318 1160119573 1189906 F 81852 Enterococcaceae + 86.22 23280142 3851230 1156884148 1183146 G 1350 Enterococcus + 70.81 19117311 19022067 552598355 611676 S 1352 Enterococcus faecium + 0.20 54986 54986 168674 888 S1 1305849 Enterococcus faecium Aus0085 + 0.07 17755 17755 47482 907 S1 333849 Enterococcus faecium DO + 0.05 13797 13797 39152 754 S1 565663 Enterococcus faecium Com15 + 0.01 3869 3869 13778 835 S1 1158600 Enterococcus faecium ATCC 8459 = NRRL B-2354 + 0.01 3314 3314 5506 773 S1 1328870 Enterococcus faecium UC7251 + 0.01 1523 1523 1642 88 S1 1344042 Enterococcus faecium T110 + 0.69 185099 185099 3581240 7489 S 33945 Enterococcus avium + 0.09 23719 23466 99801 5428 S 1351 Enterococcus faecalis + 0.00 63 63 248 77 S1 936153 Enterococcus faecalis 62 + 0.00 56 56 115 35 S1 699186 Enterococcus faecalis R712 + 0.00 42 42 181 90 S1 1201292 Enterococcus faecalis ATCC 29212 + 0.00 40 40 145 27 S1 565651 Enterococcus faecalis ARO1/DG + 0.00 24 24 80 44 S1 1287066 Enterococcus faecalis DENG1 + 0.00 17 17 70 28 S1 1206105 Enterococcus faecalis D32 + 0.00 6 6 11 4 S1 226185 Enterococcus faecalis V583 + 0.00 5 5 9 7 S1 1157365 Enterococcus faecalis EnGen0107 + 0.08 21563 21563 113346 7852 S 53345 Enterococcus durans + 0.07 18570 18332 152372 8271 S 1354 Enterococcus hirae + 0.00 238 238 2150 8 S1 768486 Enterococcus hirae ATCC 9790 + 0.05 14452 14452 102519 5331 S 357441 Enterococcus lactis + 0.05 13586 13304 77960 6050 S 53346 Enterococcus mundtii + 0.00 282 282 3118 777 S1 1300150 Enterococcus mundtii QU 25 + 0.04 11263 11223 45393 2277 S 37734 Enterococcus casseliflavus + 0.00 40 40 140 79 S1 565655 Enterococcus casseliflavus EC20 + 0.04 9647 0 66305 1898 G1 2608891 unclassified Enterococcus + 0.02 5363 5363 16331 176 S 2060307 Enterococcus sp. FDAARGOS_375 + 0.01 3725 3725 46685 1150 S 2603296 Enterococcus sp. DA9 + 0.00 339 339 1190 162 S 2420313 Enterococcus sp. FDAARGOS_553 + 0.00 162 162 1841 326 S 2582830 Enterococcus sp. M190262 + 0.00 58 58 258 84 S 2057791 Enterococcus sp. CR-Ec1 + 0.02 5457 5457 34051 3053 S 417368 Enterococcus thailandicus + 0.01 2805 2805 8614 1208 S 44008 Enterococcus cecorum + 0.01 2378 2378 19583 1010 S 1805431 Enterococcus saigonensis + 0.00 1300 1300 2092 593 S 118060 Enterococcus rotai + 0.00 1102 1102 10853 899 S 71452 Enterococcus raffinosus + 0.00 246 246 4180 875 S 160453 Enterococcus gilvus + 0.00 190 190 783 326 S 1353 Enterococcus gallinarum + 0.00 147 147 4830 730 S 2005703 Enterococcus wangshanyuanii + 0.00 72 72 190 72 S 2839759 Enterococcus innesii + 0.00 5 5 10 4 S 246144 Enterococcus italicus + 0.00 1237 44 14116 2792 G 2737 Vagococcus + 0.00 693 693 1911 253 S 218144 Vagococcus carniphilus + 0.00 281 281 2533 381 S 2738 Vagococcus fluvialis + 0.00 62 62 3977 234 S 633807 Vagococcus penaei + 0.00 52 52 495 243 S 519472 Vagococcus teuberi + 0.00 33 33 385 244 S 81947 Vagococcus lutrae + 0.00 25 25 1797 263 S 2562451 Vagococcus xieshaowenii + 0.00 24 24 338 227 S 2571750 Vagococcus zengguangii + 0.00 12 12 298 192 S 2714946 Vagococcus coleopterorum + 0.00 7 0 234 158 G1 2648499 unclassified Vagococcus + 0.00 7 7 234 158 S 2925838 Vagococcus sp. CY52-2 + 0.00 4 4 311 233 S 2714947 Vagococcus hydrophili + 0.00 619 62 7023 1434 G 51668 Tetragenococcus + 0.00 423 423 1910 356 S 290335 Tetragenococcus koreensis + 0.00 82 74 2333 567 S 51669 Tetragenococcus halophilus + 0.00 8 8 63 22 S1 945021 Tetragenococcus halophilus NBRC 12172 + 0.00 52 52 2195 377 S 526944 Tetragenococcus osmophilus + 0.00 13 0 520 373 G 33969 Melissococcus + 0.00 13 12 520 373 S 33970 Melissococcus plutonius + 0.00 1 1 1 1 S1 940190 Melissococcus plutonius ATCC 35311 + 0.39 104706 254 5258535 599775 F 1300 Streptococcaceae + 0.38 102794 3671 5186863 590804 G 1301 Streptococcus + 0.34 91845 91224 3055104 363371 S 1308 Streptococcus thermophilus + 0.00 107 107 353 62 S1 1433288 Streptococcus thermophilus MTH17CL396 + 0.00 95 95 332 55 S1 1433289 Streptococcus thermophilus M17PTZA496 + 0.00 60 60 294 47 S1 767463 Streptococcus thermophilus ND03 + 0.00 53 53 160 45 S1 1435974 Streptococcus thermophilus TH982 + 0.00 50 50 99 30 S1 1436725 Streptococcus thermophilus TH1477 + 0.00 47 47 109 32 S1 1435981 Streptococcus thermophilus 1F8CT + 0.00 46 46 120 14 S1 1408178 Streptococcus thermophilus ASCC 1275 + 0.00 38 38 103 31 S1 1423145 Streptococcus thermophilus TH1436 + 0.00 36 36 94 28 S1 264199 Streptococcus thermophilus LMG 18311 + 0.00 23 23 140 20 S1 1435972 Streptococcus thermophilus TH985 + 0.00 21 21 70 24 S1 1051074 Streptococcus thermophilus JIM 8232 + 0.00 20 20 35 17 S1 1415776 Streptococcus thermophilus TH1435 + 0.00 17 17 49 16 S1 322159 Streptococcus thermophilus LMD-9 + 0.00 6 6 10 4 S1 299768 Streptococcus thermophilus CNRZ1066 + 0.00 2 2 2 2 S1 1187956 Streptococcus thermophilus MN-ZLW-002 + 0.01 2298 2284 14750 368 S 1314 Streptococcus pyogenes + 0.00 4 0 6 4 S1 342023 Streptococcus pyogenes serotype M12 + 0.00 4 4 6 4 S2 1048264 Streptococcus pyogenes HKU QMH11M0907901 + 0.00 3 0 12 3 S1 301452 Streptococcus pyogenes serotype M49 + 0.00 3 3 12 3 S2 471876 Streptococcus pyogenes NZ131 + 0.00 3 0 9 5 S1 301447 Streptococcus pyogenes serotype M1 + 0.00 2 2 2 1 S2 160490 Streptococcus pyogenes M1 GAS + 0.00 1 1 7 4 S2 1207470 Streptococcus pyogenes M1 476 + 0.00 3 0 10 2 S1 798299 Streptococcus pyogenes serotype M59 + 0.00 3 3 10 2 S2 798300 Streptococcus pyogenes MGAS15252 + 0.00 1 0 5 2 S1 301449 Streptococcus pyogenes serotype M5 + 0.00 1 1 5 2 S2 160491 Streptococcus pyogenes str. Manfredo + 0.01 1790 1765 3334 504 S 1307 Streptococcus suis + 0.00 11 11 24 13 S1 568814 Streptococcus suis BM407 + 0.00 8 8 11 2 S1 1005042 Streptococcus suis D9 + 0.00 3 3 23 18 S1 1004952 Streptococcus suis D12 + 0.00 2 2 21 12 S1 1340847 Streptococcus suis T15 + 0.00 1 1 5 1 S1 1380773 Streptococcus suis YB51 + 0.00 1315 1290 7003 226 S 1311 Streptococcus agalactiae + 0.00 17 17 120 31 S1 1309807 Streptococcus agalactiae ILRI005 + 0.00 3 0 4 1 S1 216466 Streptococcus agalactiae serogroup V + 0.00 3 3 4 1 S2 208435 Streptococcus agalactiae 2603V/R + 0.00 3 3 14 3 S1 1203670 Streptococcus agalactiae GD201008-001 + 0.00 2 2 5 5 S1 1309806 Streptococcus agalactiae 09mas018883 + 0.00 772 3 5171 83 S 45634 Streptococcus cristatus + 0.00 767 767 5044 6 S1 1302863 Streptococcus cristatus AS 1.3089 + 0.00 2 2 57 36 S1 889201 Streptococcus cristatus ATCC 51100 + 0.00 174 112 2086 148 S 1348 Streptococcus parauberis + 0.00 62 62 1565 26 S1 873447 Streptococcus parauberis NCFD 2020 + 0.00 156 135 727 371 S 1313 Streptococcus pneumoniae + 0.00 5 5 5 2 S1 1130804 Streptococcus pneumoniae ST556 + 0.00 4 4 9 7 S1 516950 Streptococcus pneumoniae CGSP14 + 0.00 4 4 43 19 S1 525381 Streptococcus pneumoniae TCH8431/19A + 0.00 3 3 9 3 S1 487213 Streptococcus pneumoniae Taiwan19F-14 + 0.00 1 1 6 5 S1 1159083 Streptococcus pneumoniae PCS8235 + 0.00 1 1 15 12 S1 487214 Streptococcus pneumoniae Hungary19A-6 + 0.00 1 1 14 5 S1 869311 Streptococcus pneumoniae SPN032672 + 0.00 1 1 1 1 S1 512566 Streptococcus pneumoniae G54 + 0.00 1 1 8 8 S1 869303 Streptococcus pneumoniae SPN034156 + 0.00 96 91 2691 1552 S 1304 Streptococcus salivarius + 0.00 3 3 92 53 S1 1046629 Streptococcus salivarius 57.I + 0.00 2 2 25 17 S1 1048332 Streptococcus salivarius CCHSS3 + 0.00 93 93 575 123 S 68892 Streptococcus infantis + 0.00 75 2 2235 806 G1 2608887 unclassified Streptococcus + 0.00 16 16 600 115 S 1316411 Streptococcus sp. HSISS2 + 0.00 16 16 44 35 S 1940319 Streptococcus sp. DAT741 + 0.00 11 11 416 84 S 1316412 Streptococcus sp. HSISS3 + 0.00 5 5 9 7 S 1319 Streptococcus sp. 'group B' + 0.00 4 4 52 41 S 2610896 Streptococcus sp. LPB0220 + 0.00 3 3 61 47 S 712633 Streptococcus sp. oral taxon 431 + 0.00 3 3 119 14 S 1316410 Streptococcus sp. HSISS1 + 0.00 3 3 73 26 S 1839799 Streptococcus sp. FDAARGOS_192 + 0.00 2 2 12 10 S 2684658 Streptococcus sp. CNU 77-61 + 0.00 2 2 30 22 S 1759399 Streptococcus sp. A12 + 0.00 2 2 8 3 S 2420309 Streptococcus sp. FDAARGOS_521 + 0.00 1 1 26 26 S 1902136 Streptococcus sp. NPS 308 + 0.00 1 1 19 16 S 2598453 Streptococcus sp. 116-D4 + 0.00 1 1 15 12 S 2583584 Streptococcus sp. NCTC 11567 + 0.00 1 1 24 13 S 2686210 Streptococcus sp. CNU G2 + 0.00 1 1 30 24 S 1316408 Streptococcus sp. HSISM1 + 0.00 1 1 80 51 S 2781599 Streptococcus sp. HKU75 + 0.00 59 0 511 333 G1 119603 Streptococcus dysgalactiae group + 0.00 47 34 235 123 S 1334 Streptococcus dysgalactiae + 0.00 7 2 41 22 S1 119602 Streptococcus dysgalactiae subsp. equisimilis + 0.00 3 3 4 1 S2 759913 Streptococcus dysgalactiae subsp. equisimilis AC-2713 + 0.00 2 2 11 4 S2 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 + 0.00 6 6 22 17 S1 99822 Streptococcus dysgalactiae subsp. dysgalactiae + 0.00 12 3 272 206 S 1336 Streptococcus equi + 0.00 8 8 182 140 S1 40041 Streptococcus equi subsp. zooepidemicus + 0.00 1 1 23 21 S1 148942 Streptococcus equi subsp. equi + 0.00 54 46 351 118 S 315405 Streptococcus gallolyticus + 0.00 8 0 36 22 S1 53354 Streptococcus gallolyticus subsp. gallolyticus + 0.00 5 5 20 10 S2 637909 Streptococcus gallolyticus UCN34 + 0.00 3 3 13 10 S2 981539 Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 + 0.00 53 5 2476 836 G1 671232 Streptococcus anginosus group + 0.00 25 24 486 417 S 1328 Streptococcus anginosus + 0.00 1 1 3 3 S1 862971 Streptococcus anginosus C238 + 0.00 16 12 231 170 S 76860 Streptococcus constellatus + 0.00 4 3 19 13 S1 184250 Streptococcus constellatus subsp. pharyngis + 0.00 1 1 15 10 S2 696216 Streptococcus constellatus subsp. pharyngis C232 + 0.00 7 3 1629 119 S 1338 Streptococcus intermedius + 0.00 3 3 16 16 S1 862967 Streptococcus intermedius B196 + 0.00 1 1 59 59 S1 862966 Streptococcus intermedius C270 + 0.00 42 31 249 161 S 28037 Streptococcus mitis + 0.00 11 11 50 31 S1 365659 Streptococcus mitis B6 + 0.00 39 33 254 38 S 150055 Streptococcus lutetiensis + 0.00 6 6 12 6 S1 1076934 Streptococcus lutetiensis 033 + 0.00 30 30 4366 81 S 82348 Streptococcus pluranimalium + 0.00 24 24 265 122 S 1302 Streptococcus gordonii + 0.00 22 22 1181 323 S 1343 Streptococcus vestibularis + 0.00 20 12 31 13 S 197614 Streptococcus pasteurianus + 0.00 8 8 15 8 S1 981540 Streptococcus pasteurianus ATCC 43144 + 0.00 20 20 1345 61 S 1346 Streptococcus iniae + 0.00 17 12 1783 154 S 1303 Streptococcus oralis + 0.00 4 4 13 6 S1 1891914 Streptococcus oralis subsp. oralis + 0.00 1 1 8 5 S1 927666 Streptococcus oralis Uo5 + 0.00 16 16 107 64 S 1501662 Streptococcus parasuis + 0.00 11 11 147 111 S 1309 Streptococcus mutans + 0.00 10 10 187 117 S 1335 Streptococcus equinus + 0.00 9 9 1221 72 S 1310 Streptococcus sobrinus + 0.00 9 0 18 7 S 257758 Streptococcus pseudopneumoniae + 0.00 9 9 18 7 S1 1054460 Streptococcus pseudopneumoniae IS7493 + 0.00 8 8 186 128 S 1340 Streptococcus porcinus + 0.00 7 4 130 111 S 102684 Streptococcus infantarius + 0.00 3 0 28 19 S1 150054 Streptococcus infantarius subsp. infantarius + 0.00 3 3 28 19 S2 1069533 Streptococcus infantarius subsp. infantarius CJ18 + 0.00 7 7 104 56 S 2173853 Streptococcus chenjunshii + 0.00 6 6 134 94 S 149016 Streptococcus urinalis + 0.00 6 6 65 42 S 1326 Streptococcus acidominimus + 0.00 5 5 38 21 S 1234680 Streptococcus rubneri + 0.00 5 5 94 60 S 254785 Streptococcus halichoeri + 0.00 4 4 254 205 S 361101 Streptococcus pseudoporcinus + 0.00 4 4 1445 55 S 684066 Streptococcus lactarius + 0.00 4 3 173 132 S 1305 Streptococcus sanguinis + 0.00 1 1 32 18 S1 388919 Streptococcus sanguinis SK36 + 0.00 3 3 71 57 S 1329 Streptococcus canis + 0.00 2 2 53 37 S 1888195 Streptococcus himalayensis + 0.00 2 2 22 16 S 2382163 Streptococcus koreensis + 0.00 2 2 86 66 S 1341 Streptococcus ratti + 0.00 2 2 13 8 S 33040 Streptococcus milleri + 0.00 1 1 61 47 S 1811193 Streptococcus pantholopis + 0.00 1 1 65 52 S 1345 Streptococcus ferus + 0.00 1 1 24 17 S 1156431 Streptococcus ilei + 0.00 1 1 41 28 S 1111760 Streptococcus troglodytae + 0.00 1 0 66 44 S 1318 Streptococcus parasanguinis + 0.00 1 1 40 22 S1 1114965 Streptococcus parasanguinis FW213 + 0.00 1 1 31 20 S 113107 Streptococcus australis + 0.00 1 1 112 81 S 1349 Streptococcus uberis + 0.01 1658 322 16959 2950 G 1357 Lactococcus + 0.00 554 252 3932 815 S 1358 Lactococcus lactis + 0.00 302 219 1087 309 S1 1360 Lactococcus lactis subsp. lactis + 0.00 71 71 180 52 S2 44688 Lactococcus lactis subsp. lactis bv. diacetylactis + 0.00 12 12 18 6 S2 889971 Lactococcus lactis subsp. lactis K214 + 0.00 255 255 2823 230 S 1366 Lactococcus raffinolactis + 0.00 253 201 1254 436 S 1359 Lactococcus cremoris + 0.00 52 0 202 55 S1 2816960 Lactococcus cremoris subsp. cremoris + 0.00 41 41 168 33 S2 1449093 Lactococcus lactis subsp. cremoris IBB477 + 0.00 5 5 23 14 S2 1104322 Lactococcus lactis subsp. cremoris A76 + 0.00 5 5 5 2 S2 1111678 Lactococcus lactis subsp. cremoris UC509.9 + 0.00 1 1 2 2 S2 272622 Lactococcus lactis subsp. cremoris SK11 + 0.00 223 223 2545 327 S 1363 Lactococcus garvieae + 0.00 22 14 85 40 S 1364 Lactococcus piscium + 0.00 8 8 34 24 S1 297352 Lactococcus piscium MKFS47 + 0.00 16 16 1598 78 S 1151742 Lactococcus taiwanensis + 0.00 10 0 42 28 G1 2643510 unclassified Lactococcus + 0.00 10 10 20 10 S 2816912 Lactococcus sp. LG606 + 0.00 3 3 1214 54 S 2419773 Lactococcus allomyrinae + 0.02 5202 13 36684 13979 F 186828 Carnobacteriaceae + 0.01 3756 237 12865 1095 G 1470540 Jeotgalibaca + 0.01 3406 0 7799 452 G1 2621505 unclassified Jeotgalibaca + 0.01 3404 3404 6390 329 S 1903686 Jeotgalibaca sp. PTS2502 + 0.00 2 2 1409 123 S 2908211 Jeotgalibaca sp. MA1X17-3 + 0.00 59 59 1533 81 S 1868794 Jeotgalibaca arthritidis + 0.00 27 27 254 176 S 2496265 Jeotgalibaca ciconiae + 0.00 25 25 1739 159 S 1868793 Jeotgalibaca porci + 0.00 2 2 113 83 S 708126 Jeotgalibaca dankookensis + 0.00 1101 13 14497 10851 G 117563 Granulicatella + 0.00 1042 1042 13412 10083 S 46124 Granulicatella adiacens + 0.00 46 46 497 318 S 137732 Granulicatella elegans + 0.00 265 23 7092 1627 G 2747 Carnobacterium + 0.00 93 93 405 160 S 174587 Carnobacterium viridans + 0.00 63 32 1996 388 S 2751 Carnobacterium maltaromaticum + 0.00 31 31 146 82 S1 1234679 Carnobacterium maltaromaticum LMA28 + 0.00 56 56 3587 395 S 2748 Carnobacterium divergens + 0.00 24 0 386 191 S 147709 Carnobacterium inhibens + 0.00 24 24 386 191 S1 1266845 Carnobacterium inhibens subsp. gilichinskyi + 0.00 6 0 472 338 G1 257487 unclassified Carnobacterium + 0.00 6 6 71 33 S 2800128 Carnobacterium sp. CS13 + 0.00 50 0 381 171 G 191769 Marinilactibacillus + 0.00 50 0 381 171 G1 2632303 unclassified Marinilactibacillus + 0.00 50 50 381 171 S 1911586 Marinilactibacillus sp. 15R + 0.00 17 0 1691 131 G 29393 Dolosigranulum + 0.00 17 17 1691 131 S 29394 Dolosigranulum pigrum + 0.02 4786 254 89320 21669 F 33958 Lactobacillaceae + 0.01 1636 10 19738 823 G 2742598 Limosilactobacillus + 0.00 831 831 13420 70 S 1633 Limosilactobacillus vaginalis + 0.00 704 699 5219 197 S 1598 Limosilactobacillus reuteri + 0.00 3 0 8 5 S1 927703 Limosilactobacillus reuteri subsp. suis + 0.00 3 3 4 2 S2 1273150 Limosilactobacillus reuteri 1063 + 0.00 1 0 4 1 S1 557436 Limosilactobacillus reuteri subsp. reuteri + 0.00 1 1 4 1 S2 557433 Limosilactobacillus reuteri JCM 1112 + 0.00 1 1 17 8 S1 1358027 Limosilactobacillus reuteri TD1 + 0.00 73 61 738 395 S 1613 Limosilactobacillus fermentum + 0.00 12 12 48 12 S1 1381124 Limosilactobacillus fermentum 3872 + 0.00 9 4 106 55 S 97478 Limosilactobacillus mucosae + 0.00 5 5 37 15 S1 1130798 Limosilactobacillus mucosae LM1 + 0.00 5 5 59 15 S 35787 Limosilactobacillus pontis + 0.00 2 2 22 13 S 47493 Limosilactobacillus panis + 0.00 2 2 58 32 S 227942 Limosilactobacillus gastricus + 0.00 966 25 3542 568 G 1243 Leuconostoc + 0.00 866 865 1287 49 S 1244 Leuconostoc gelidum + 0.00 1 1 28 20 S1 115778 Leuconostoc gelidum subsp. gasicomitatum + 0.00 37 37 176 29 S 33964 Leuconostoc citreum + 0.00 25 25 119 34 S 1246 Leuconostoc lactis + 0.00 5 1 100 75 S 1245 Leuconostoc mesenteroides + 0.00 3 3 17 15 S1 33967 Leuconostoc mesenteroides subsp. mesenteroides + 0.00 1 1 8 3 S1 427140 Leuconostoc mesenteroides KFRI-MG + 0.00 4 0 27 7 G1 2685106 unclassified Leuconostoc + 0.00 4 4 24 6 S 2698683 Leuconostoc sp. MTCC 10508 + 0.00 2 2 91 78 S 33968 Leuconostoc pseudomesenteroides + 0.00 1 0 50 40 S 1252 Leuconostoc carnosum + 0.00 1 1 13 12 S1 1229758 Leuconostoc carnosum JB16 + 0.00 1 1 8 6 S 2766470 Leuconostoc falkenbergense + 0.00 754 17 21451 11652 G 1578 Lactobacillus + 0.00 305 0 1434 135 G1 2620435 unclassified Lactobacillus + 0.00 302 302 1248 7 S 1545702 Lactobacillus sp. wkB8 + 0.00 2 2 3 1 S 2690380 Lactobacillus sp. JM1 + 0.00 1 1 2 1 S 1248330 Lactobacillus sp. PC121B + 0.00 276 222 12504 10129 S 1584 Lactobacillus delbrueckii + 0.00 17 12 166 122 S1 1585 Lactobacillus delbrueckii subsp. bulgaricus + 0.00 3 3 49 49 S2 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 + 0.00 2 2 35 12 S2 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 + 0.00 13 7 112 96 S1 83684 Lactobacillus delbrueckii subsp. delbrueckii + 0.00 6 6 23 18 S2 1423823 Lactobacillus delbrueckii subsp. delbrueckii DSM 20074 = JCM 1012 + 0.00 12 12 75 46 S1 29397 Lactobacillus delbrueckii subsp. lactis + 0.00 7 7 59 40 S1 249265 Lactobacillus delbrueckii subsp. indicus + 0.00 4 4 29 24 S1 1050107 Lactobacillus delbrueckii subsp. sunkii + 0.00 1 0 7 4 S1 1537158 Lactobacillus delbrueckii subsp. jakobsenii + 0.00 1 1 7 4 S2 1217420 Lactobacillus delbrueckii subsp. jakobsenii ZN7a-9 = DSM 26046 + 0.00 43 10 339 118 S 1579 Lactobacillus acidophilus + 0.00 33 33 196 31 S1 272621 Lactobacillus acidophilus NCFM + 0.00 18 9 124 66 S 109790 Lactobacillus jensenii + 0.00 9 9 39 14 S1 525329 Lactobacillus jensenii JV-V16 + 0.00 17 17 104 83 S 147802 Lactobacillus iners + 0.00 16 14 144 86 S 33959 Lactobacillus johnsonii + 0.00 2 2 6 3 S1 909954 Lactobacillus johnsonii DPC 6026 + 0.00 14 7 96 41 S 1604 Lactobacillus amylovorus + 0.00 7 7 44 8 S1 1423723 Lactobacillus amylovorus DSM 20531 + 0.00 12 12 64 45 S 1600 Lactobacillus acetotolerans + 0.00 10 9 107 50 S 1587 Lactobacillus helveticus + 0.00 1 1 8 1 S1 880633 Lactobacillus helveticus R0052 + 0.00 8 5 86 46 S 47770 Lactobacillus crispatus + 0.00 3 3 24 6 S1 748671 Lactobacillus crispatus ST1 + 0.00 6 6 1355 56 S 2269374 Lactobacillus terrae + 0.00 5 5 22 11 S 52242 Lactobacillus gallinarum + 0.00 2 2 46 33 S 303541 Lactobacillus apis + 0.00 2 2 11 6 S 1218494 Lactobacillus helsingborgensis + 0.00 1 1 2400 29 S 227945 Lactobacillus ultunensis + 0.00 1 1 53 47 S 2012495 Lactobacillus panisapium + 0.00 1 1 1753 43 S 1596 Lactobacillus gasseri + 0.00 262 20 4237 1583 G 46255 Weissella + 0.00 121 121 783 348 S 137591 Weissella cibaria + 0.00 84 84 530 70 S 1631871 Weissella jogaejeotgali + 0.00 18 18 1579 72 S 46256 Weissella hellenica + 0.00 15 15 764 727 S 1583 Weissella confusa + 0.00 3 3 9 4 S 759620 Weissella ceti + 0.00 1 1 59 31 S 155866 Weissella soli + 0.00 257 5 6357 851 G 2767887 Ligilactobacillus + 0.00 153 140 954 285 S 1624 Ligilactobacillus salivarius + 0.00 11 11 45 10 S1 362948 Ligilactobacillus salivarius UCC118 + 0.00 2 2 19 7 S1 1194971 Ligilactobacillus salivarius str. Ren + 0.00 64 64 1731 115 S 1622 Ligilactobacillus murinus + 0.00 15 0 185 97 S 1623 Ligilactobacillus ruminis + 0.00 15 15 185 97 S1 1069534 Ligilactobacillus ruminis ATCC 27782 + 0.00 14 14 148 101 S 1601 Ligilactobacillus agilis + 0.00 5 5 118 75 S 89059 Ligilactobacillus acidipiscis + 0.00 1 1 59 46 S 228229 Ligilactobacillus saerimneri + 0.00 158 2 2438 620 G 2767842 Lactiplantibacillus + 0.00 137 134 836 374 S 1590 Lactiplantibacillus plantarum + 0.00 2 2 7 6 S1 337330 Lactiplantibacillus plantarum subsp. plantarum + 0.00 1 1 7 7 S1 1304889 Lactiplantibacillus plantarum CMPG5300 + 0.00 11 11 89 55 S 60520 Lactiplantibacillus paraplantarum + 0.00 8 8 1394 98 S 1589 Lactiplantibacillus pentosus + 0.00 113 3 4935 497 G 1253 Pediococcus + 0.00 68 0 429 157 G1 1670797 Pediococcus acidilactici group + 0.00 68 68 429 157 S 1254 Pediococcus acidilactici + 0.00 24 24 170 102 S 1255 Pediococcus pentosaceus + 0.00 11 11 1356 84 S 51663 Pediococcus damnosus + 0.00 5 5 1716 61 S 187452 Pediococcus claussenii + 0.00 2 2 1220 57 S 114090 Pediococcus inopinatus + 0.00 104 1 6658 533 G 2767885 Latilactobacillus + 0.00 51 50 384 151 S 28038 Latilactobacillus curvatus + 0.00 1 1 1 1 S1 1293592 Latilactobacillus curvatus JCM 1096 = DSM 20019 + 0.00 47 43 503 244 S 1599 Latilactobacillus sakei + 0.00 4 0 35 13 S1 214326 Latilactobacillus sakei subsp. sakei + 0.00 4 4 34 12 S2 1423833 Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157 + 0.00 5 5 4219 46 S 60519 Latilactobacillus graminis + 0.00 55 13 3246 512 G 2759736 Lacticaseibacillus + 0.00 34 26 220 129 S 1597 Lacticaseibacillus paracasei + 0.00 4 4 23 11 S1 47714 Lacticaseibacillus paracasei subsp. paracasei + 0.00 2 2 8 5 S1 113557 Lacticaseibacillus paracasei subsp. tolerans + 0.00 2 2 14 3 S1 321967 Lacticaseibacillus paracasei ATCC 334 + 0.00 5 5 1299 62 S 88233 Lacticaseibacillus manihotivorans + 0.00 2 2 129 87 S 47715 Lacticaseibacillus rhamnosus + 0.00 1 1 42 31 S 57037 Lacticaseibacillus zeae + 0.00 45 2 581 318 G 2767886 Levilactobacillus + 0.00 35 35 358 179 S 1580 Levilactobacillus brevis + 0.00 3 3 70 35 S 637971 Levilactobacillus koreensis + 0.00 3 3 69 50 S 2292255 Levilactobacillus suantsaii + 0.00 2 2 39 19 S 267363 Levilactobacillus zymae + 0.00 29 0 116 60 G 2930384 Periweissella + 0.00 29 29 116 60 S 2506420 Periweissella cryptocerci + 0.00 21 2 3434 472 G 2767879 Companilactobacillus + 0.00 5 5 100 53 S 938155 Companilactobacillus futsaii + 0.00 4 0 50 35 S 1612 Companilactobacillus farciminis + 0.00 4 4 50 35 S1 936140 Companilactobacillus farciminis KCTC 3681 = DSM 20184 + 0.00 3 3 1427 38 S 83526 Companilactobacillus paralimentarius + 0.00 2 0 65 51 S 1602 Companilactobacillus alimentarius + 0.00 2 2 65 51 S1 1423720 Companilactobacillus alimentarius DSM 20249 + 0.00 2 2 28 23 S 392416 Companilactobacillus crustorum + 0.00 2 2 58 39 S 2714036 Companilactobacillus pabuli + 0.00 1 1 57 47 S 1847728 Companilactobacillus allii + 0.00 20 0 267 138 G 2767881 Fructilactobacillus + 0.00 15 15 115 53 S 1625 Fructilactobacillus sanfranciscensis + 0.00 4 4 80 40 S 1614 Fructilactobacillus fructivorans + 0.00 1 1 57 41 S 53444 Fructilactobacillus lindneri + 0.00 19 2 1808 232 G 2767889 Loigolactobacillus + 0.00 10 7 179 107 S 1610 Loigolactobacillus coryniformis + 0.00 2 0 29 16 S1 115541 Loigolactobacillus coryniformis subsp. coryniformis + 0.00 2 2 29 16 S2 913848 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 + 0.00 1 0 15 14 S1 115542 Loigolactobacillus coryniformis subsp. torquens + 0.00 1 1 15 14 S2 1423822 Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535 + 0.00 4 4 109 62 S 375175 Loigolactobacillus backii + 0.00 3 3 1506 55 S 1607 Loigolactobacillus bifermentans + 0.00 16 7 384 272 G 2767893 Lentilactobacillus + 0.00 4 1 74 49 S 1581 Lentilactobacillus buchneri + 0.00 3 0 35 19 S1 2737512 Lentilactobacillus buchneri subsp. silagei + 0.00 3 3 35 19 S2 1071400 Lentilactobacillus buchneri subsp. silagei CD034 + 0.00 3 3 49 40 S 152331 Lentilactobacillus parabuchneri + 0.00 1 1 92 76 S 1588 Lentilactobacillus hilgardii + 0.00 1 1 46 34 S 1138822 Lentilactobacillus curieae + 0.00 12 0 84 41 G 2767874 Acetilactobacillus + 0.00 12 12 84 41 S 1720083 Acetilactobacillus jinshanensis + 0.00 11 5 270 175 G 2767890 Paucilactobacillus + 0.00 5 0 78 53 S 293371 Paucilactobacillus oligofermentans + 0.00 5 5 78 53 S1 1423778 Paucilactobacillus oligofermentans DSM 15707 = LMG 22743 + 0.00 1 1 64 49 S 1296540 Paucilactobacillus nenjiangensis + 0.00 11 4 1397 114 G 46254 Oenococcus + 0.00 4 0 1257 22 S 336988 Oenococcus kitaharae + 0.00 4 4 1257 22 S1 1045004 Oenococcus kitaharae DSM 17330 + 0.00 3 3 41 30 S 2203724 Oenococcus sicerae + 0.00 9 0 81 46 G 2767876 Amylolactobacillus + 0.00 9 0 81 46 S 1603 Amylolactobacillus amylophilus + 0.00 9 9 81 46 S1 1423721 Amylolactobacillus amylophilus DSM 20533 = JCM 1125 + 0.00 9 0 297 213 G 2767888 Liquorilactobacillus + 0.00 5 5 104 73 S 468911 Liquorilactobacillus hordei + 0.00 2 2 77 54 S 1618 Liquorilactobacillus mali + 0.00 2 2 87 69 S 82688 Liquorilactobacillus nagelii + 0.00 7 5 111 87 G 2767877 Apilactobacillus + 0.00 2 2 49 45 S 148814 Apilactobacillus kunkeei + 0.00 6 0 129 92 G 2767891 Schleiferilactobacillus + 0.00 6 6 129 92 S 304207 Schleiferilactobacillus harbinensis + 0.00 6 0 158 107 G 2767892 Secundilactobacillus + 0.00 6 6 92 62 S 240427 Secundilactobacillus paracollinoides + 0.00 3 0 195 167 G 2767882 Furfurilactobacillus + 0.00 3 3 195 167 S 231049 Furfurilactobacillus rossiae + 0.00 3 0 114 90 G 2767884 Lapidilactobacillus + 0.00 3 3 114 90 S 51664 Lapidilactobacillus dextrinicus + 0.01 1353 1 7676 732 F 186827 Aerococcaceae + 0.00 1065 0 4338 97 G 89092 Ignavigranum + 0.00 1065 1065 4338 97 S 89093 Ignavigranum ruoffiae + 0.00 275 36 3105 476 G 1375 Aerococcus + 0.00 137 137 1954 123 S 51665 Aerococcus urinaeequi + 0.00 89 89 590 81 S 1377 Aerococcus viridans + 0.00 5 5 78 55 S 87541 Aerococcus christensenii + 0.00 4 4 88 63 S 1376 Aerococcus urinae + 0.00 4 4 61 41 S 119206 Aerococcus sanguinicola + 0.00 10 0 119 80 G 2689587 Suicoccus + 0.00 10 10 119 80 S 2036206 Suicoccus acidiformans + 0.00 2 0 110 76 G 46123 Abiotrophia + 0.00 2 2 110 76 S 46125 Abiotrophia defectiva + 0.17 45979 791 313684 26202 O 1385 Bacillales + 0.09 23366 18 173053 5123 F 90964 Staphylococcaceae + 0.09 23074 8321 158614 4331 G 1279 Staphylococcus + 0.05 12774 12704 111754 1851 S 1280 Staphylococcus aureus + 0.00 19 19 28 18 S1 663951 Staphylococcus aureus subsp. aureus TW20 + 0.00 10 10 102 6 S1 548473 Staphylococcus aureus subsp. aureus TCH60 + 0.00 7 7 56 21 S1 1406863 Staphylococcus aureus subsp. aureus Z172 + 0.00 7 7 8 5 S1 546342 Staphylococcus aureus subsp. aureus str. JKD6008 + 0.00 5 5 5 1 S1 1368166 Staphylococcus aureus subsp. aureus SA268 + 0.00 4 4 14 5 S1 158878 Staphylococcus aureus subsp. aureus Mu50 + 0.00 4 4 15 13 S1 1229492 Staphylococcus aureus 08BA02176 + 0.00 3 3 3 2 S1 1006543 Staphylococcus aureus subsp. aureus T0131 + 0.00 2 2 2 2 S1 418127 Staphylococcus aureus subsp. aureus Mu3 + 0.00 2 2 2 1 S1 1028799 Staphylococcus aureus subsp. aureus VC40 + 0.00 2 0 8 4 S1 523796 Staphylococcus aureus subsp. aureus ST398 + 0.00 2 2 8 4 S2 1155084 Staphylococcus aureus subsp. aureus 71193 + 0.00 2 2 17 17 S1 158879 Staphylococcus aureus subsp. aureus N315 + 0.00 2 2 2 1 S1 93061 Staphylococcus aureus subsp. aureus NCTC 8325 + 0.00 1 1 4 2 S1 1074919 Staphylococcus aureus subsp. aureus ST228 + 0.01 1520 0 5190 221 G1 2815305 Staphylococcus intermedius group + 0.01 1516 1511 5144 187 S 283734 Staphylococcus pseudintermedius + 0.00 3 3 14 9 S1 984892 Staphylococcus pseudintermedius ED99 + 0.00 2 2 4 2 S1 937773 Staphylococcus pseudintermedius HKU10-03 + 0.00 4 4 38 27 S 53344 Staphylococcus delphini + 0.00 176 176 943 42 S 1292 Staphylococcus warneri + 0.00 102 102 1647 206 S 1283 Staphylococcus haemolyticus + 0.00 51 51 335 161 S 1282 Staphylococcus epidermidis + 0.00 21 0 11436 128 G1 91994 unclassified Staphylococcus + 0.00 8 8 11320 58 S 1912064 Staphylococcus sp. MI 10-1553 + 0.00 8 8 25 14 S 2799681 Staphylococcus sp. T93 + 0.00 3 3 5 1 S 373067 Staphylococcus sp. 693-2 + 0.00 2 2 15 6 S 2799680 Staphylococcus sp. 11-B-312 + 0.00 13 13 65 21 S 985002 Staphylococcus argenteus + 0.00 13 13 1488 54 S 1290 Staphylococcus hominis + 0.00 11 11 107 51 S 1288 Staphylococcus xylosus + 0.00 9 9 75 24 S 70255 Staphylococcus condimenti + 0.00 7 7 35 25 S 1284 Staphylococcus hyicus + 0.00 6 6 70 44 S 46127 Staphylococcus felis + 0.00 6 6 54 29 S 29382 Staphylococcus cohnii + 0.00 5 5 98 54 S 45972 Staphylococcus pasteuri + 0.00 5 2 83 49 S 1286 Staphylococcus simulans + 0.00 3 3 5 1 S1 1287 Staphylococcus simulans bv. staphylolyticus + 0.00 5 5 57 41 S 29378 Staphylococcus arlettae + 0.00 5 5 47 30 S 28035 Staphylococcus lugdunensis + 0.00 5 5 46 27 S 1295 Staphylococcus schleiferi + 0.00 3 3 31 26 S 2699836 Staphylococcus roterodami + 0.00 3 3 23 16 S 2044912 Staphylococcus debuckii + 0.00 2 2 87 63 S 29385 Staphylococcus saprophyticus + 0.00 1 1 62 42 S 29379 Staphylococcus auricularis + 0.00 1 1 40 24 S 985762 Staphylococcus agnetis + 0.00 1 1 47 37 S 214473 Staphylococcus nepalensis + 0.00 1 1 44 31 S 170573 Staphylococcus pettenkoferi + 0.00 1 1 40 29 S 155085 Staphylococcus lutrae + 0.00 1 1 33 24 S 1293 Staphylococcus gallinarum + 0.00 1 1 23 14 S 1654388 Staphylococcus schweitzeri + 0.00 1 1 34 28 S 2781774 Staphylococcus lloydii + 0.00 1 1 93 57 S 33028 Staphylococcus saccharolyticus + 0.00 1 0 60 42 S 29388 Staphylococcus capitis + 0.00 1 1 5 4 S1 72758 Staphylococcus capitis subsp. capitis + 0.00 1 1 22 18 S 29384 Staphylococcus kloosii + 0.00 143 0 480 27 G 489909 Nosocomiicoccus + 0.00 143 143 480 27 S 489910 Nosocomiicoccus ampullae + 0.00 78 2 2000 239 G 2803850 Mammaliicoccus + 0.00 65 65 1839 121 S 1296 Mammaliicoccus sciuri + 0.00 11 11 62 39 S 71237 Mammaliicoccus vitulinus + 0.00 33 0 1385 39 G 1955413 Abyssicoccus + 0.00 33 33 1385 39 S 1817405 Abyssicoccus albus + 0.00 12 4 5699 271 G 69965 Macrococcus + 0.00 5 5 1378 60 S 1855823 Macrococcus canis + 0.00 2 2 64 40 S 69966 Macrococcus caseolyticus + 0.00 1 1 37 30 S 2875764 Macrococcus armenti + 0.00 6 2 2480 72 G 227979 Jeotgalicoccus + 0.00 3 0 69 45 G1 2630462 unclassified Jeotgalicoccus + 0.00 2 2 39 22 S 2708346 Jeotgalicoccus sp. WY2 + 0.00 1 1 30 23 S 946435 Jeotgalicoccus sp. ATCC 8456 + 0.00 1 1 2398 19 S 1461582 Jeotgalicoccus saudimassiliensis + 0.00 2 0 41 26 G 45669 Salinicoccus + 0.00 2 2 41 26 S 407035 Salinicoccus halodurans + 0.06 15482 481 77775 12203 F 186817 Bacillaceae + 0.03 9107 747 37128 5380 G 1386 Bacillus + 0.02 5514 36 9573 1098 G1 653685 Bacillus subtilis group + 0.02 5091 51 7333 251 S 1423 Bacillus subtilis + 0.02 5031 5018 6824 88 S1 135461 Bacillus subtilis subsp. subtilis + 0.00 8 8 40 17 S2 1302650 Bacillus subtilis subsp. subtilis str. BAB-1 + 0.00 5 5 15 2 S2 224308 Bacillus subtilis subsp. subtilis str. 168 + 0.00 4 4 14 6 S1 936156 Bacillus subtilis BSn5 + 0.00 3 3 14 5 S1 86029 Bacillus subtilis subsp. natto + 0.00 2 2 15 5 S1 1496303 Bacillus subtilis subsp. globigii + 0.00 299 20 1510 497 G2 1938374 Bacillus amyloliquefaciens group + 0.00 210 205 933 301 S 492670 Bacillus velezensis + 0.00 5 5 51 16 S1 1458206 Bacillus velezensis NJN-6 + 0.00 63 49 419 145 S 1390 Bacillus amyloliquefaciens + 0.00 8 8 50 5 S1 1415165 Bacillus amyloliquefaciens LFB112 + 0.00 5 5 15 10 S1 692420 Bacillus amyloliquefaciens DSM 7 = ATCC 23350 + 0.00 1 1 3 2 S1 1292358 Bacillus amyloliquefaciens KHG19 + 0.00 6 6 74 20 S 659243 Bacillus siamensis + 0.00 62 61 358 127 S 1402 Bacillus licheniformis + 0.00 1 1 1 1 S1 1126218 Bacillus licheniformis WX-02 + 0.00 7 3 29 13 S 1452 Bacillus atrophaeus + 0.00 4 4 15 4 S1 1529886 Bacillus atrophaeus subsp. globigii + 0.00 7 7 8 4 S 483913 Bacillus inaquosorum + 0.00 4 4 50 29 S 1648923 Bacillus paralicheniformis + 0.00 3 3 36 18 S 72361 Bacillus vallismortis + 0.00 3 0 43 28 G2 653388 Bacillus mojavensis subgroup + 0.00 3 3 15 9 S 260554 Bacillus halotolerans + 0.00 2 0 10 5 S 96241 Bacillus spizizenii + 0.00 2 2 10 5 S1 1052585 Bacillus subtilis subsp. spizizenii TU-B-10 + 0.01 1789 7 6835 737 G1 185979 unclassified Bacillus (in: Bacteria) + 0.01 1635 1635 4836 81 S 1071078 Bacillus sp. NSP9.1 + 0.00 39 39 89 30 S 2859227 Bacillus sp. LJBS17 + 0.00 12 12 37 10 S 2093834 Bacillus sp. ZY-1-1 + 0.00 12 12 22 16 S 2233998 Bacillus sp. COPE52 + 0.00 11 11 920 25 S 98228 Bacillus sp. OxB-1 + 0.00 10 10 20 14 S 2851015 Bacillus sp. 7D3 + 0.00 8 8 77 39 S 2709784 Bacillus sp. KH172YL63 + 0.00 6 6 12 5 S 2666127 Bacillus sp. N3536 + 0.00 6 6 18 8 S 2049935 Bacillus sp. Lzh-5 + 0.00 6 6 8 4 S 2928154 Bacillus sp. ZJS3 + 0.00 6 6 111 49 S 352858 Bacillus sp. Y1 + 0.00 4 4 73 45 S 666686 Bacillus sp. 1NLA3E + 0.00 4 4 45 26 S 2592382 Bacillus sp. M4U3P1 + 0.00 4 4 9 4 S 2933563 Bacillus sp. PGP15 + 0.00 4 4 34 23 S 1071080 Bacillus sp. SB49 + 0.00 3 3 42 24 S 2589818 Bacillus sp. Cs-700 + 0.00 2 2 28 8 S 2874284 Bacillus sp. CRB-7 + 0.00 2 2 5 4 S 745376 Bacillus sp. BS-01 + 0.00 2 2 43 35 S 1581038 Bacillus sp. FJAT-22090 + 0.00 1 1 41 30 S 2587848 Bacillus sp. THAF10 + 0.00 1 1 4 2 S 1806216 Bacillus sp. RZ2MS9 + 0.00 1 1 4 2 S 2683680 Bacillus sp. ms-22 + 0.00 1 1 2 1 S 2789208 Bacillus sp. N447-1 + 0.00 1 1 1 1 S 2842457 Bacillus sp. JNUCC-22 + 0.00 1 1 28 25 S 1705566 Bacillus sp. FJAT-18017 + 0.00 967 122 7666 1940 G1 86661 Bacillus cereus group + 0.00 255 193 1496 503 S 1428 Bacillus thuringiensis + 0.00 25 25 98 40 S1 1195464 Bacillus thuringiensis MC28 + 0.00 20 6 105 41 S1 29339 Bacillus thuringiensis serovar kurstaki + 0.00 11 11 40 9 S2 1279365 Bacillus thuringiensis serovar kurstaki str. HD73 + 0.00 3 3 5 3 S2 714359 Bacillus thuringiensis BMB171 + 0.00 8 8 26 13 S1 257985 Bacillus thuringiensis serovar andalousiensis + 0.00 3 0 12 4 S1 1441 Bacillus thuringiensis serovar morrisoni + 0.00 3 3 12 4 S2 1461024 Bacillus thuringiensis serovar morrisoni str. 4AA1 + 0.00 2 2 12 6 S1 180850 Bacillus thuringiensis serovar indiana + 0.00 1 1 5 4 S1 527019 Bacillus thuringiensis IBL 200 + 0.00 1 1 5 4 S1 1442 Bacillus thuringiensis serovar tolworthi + 0.00 1 1 1 1 S1 1217737 Bacillus thuringiensis HD-789 + 0.00 1 1 1 1 S1 132264 Bacillus thuringiensis serovar darmstadiensis + 0.00 235 141 3829 489 S 1396 Bacillus cereus + 0.00 21 21 53 16 S1 288681 Bacillus cereus E33L + 0.00 12 0 66 26 S1 1179100 Bacillus cereus biovar anthracis + 0.00 12 12 66 26 S2 637380 Bacillus cereus biovar anthracis str. CI + 0.00 9 9 69 19 S1 1454382 Bacillus cereus D17 + 0.00 8 8 38 15 S1 1217984 Bacillus cereus FRI-35 + 0.00 6 6 11 5 S1 1003239 Bacillus cereus C1L + 0.00 6 6 66 19 S1 572264 Bacillus cereus 03BB102 + 0.00 5 5 5 1 S1 526992 Bacillus cereus AH1271 + 0.00 4 4 8 6 S1 361100 Bacillus cereus Q1 + 0.00 4 4 21 11 S1 526977 Bacillus cereus ATCC 4342 + 0.00 3 3 34 11 S1 269801 Bacillus cereus G9241 + 0.00 3 3 4 2 S1 526991 Bacillus cereus AH676 + 0.00 2 2 5 5 S1 526980 Bacillus cereus ATCC 10876 + 0.00 2 2 2 1 S1 526988 Bacillus cereus Rock4-18 + 0.00 2 2 6 1 S1 526985 Bacillus cereus Rock3-42 + 0.00 2 2 16 5 S1 405532 Bacillus cereus B4264 + 0.00 2 2 6 3 S1 526967 Bacillus cereus 172560W + 0.00 1 1 2 2 S1 226900 Bacillus cereus ATCC 14579 + 0.00 1 1 7 7 S1 526969 Bacillus cereus m1550 + 0.00 1 1 125 15 S1 526983 Bacillus cereus Rock3-28 + 0.00 166 150 862 231 S 1392 Bacillus anthracis + 0.00 6 6 41 18 S1 1449979 Bacillus anthracis str. V770-NP-1R + 0.00 3 3 14 2 S1 260799 Bacillus anthracis str. Sterne + 0.00 3 3 7 3 S1 261591 Bacillus anthracis str. Vollum + 0.00 2 2 10 9 S1 568206 Bacillus anthracis str. CDC 684 + 0.00 1 1 2 1 S1 1392837 Bacillus anthracis str. SVA11 + 0.00 1 1 18 5 S1 1452727 Bacillus anthracis str. Turkey32 + 0.00 86 84 295 137 S 1405 Bacillus mycoides + 0.00 2 2 9 4 S1 315730 Bacillus mycoides KBAB4 + 0.00 65 65 149 60 S 1890302 Bacillus wiedmannii + 0.00 13 13 78 41 S 580165 Bacillus cytotoxicus + 0.00 12 12 137 73 S 64104 Bacillus pseudomycoides + 0.00 5 5 53 8 S 2026187 Bacillus pacificus + 0.00 5 5 10 1 S 2026190 Bacillus mobilis + 0.00 3 3 17 7 S 2026186 Bacillus paranthracis + 0.00 32 0 199 88 G1 1792192 Bacillus altitudinis complex + 0.00 32 32 196 85 S 293387 Bacillus altitudinis + 0.00 21 21 92 62 S 2672567 Bacillus aquiflavi + 0.00 11 9 67 40 S 561879 Bacillus safensis + 0.00 2 2 9 3 S1 1178541 Bacillus safensis FO-36b + 0.00 10 0 52 35 S 1471 Bacillus methanolicus + 0.00 10 10 52 35 S1 796606 Bacillus methanolicus MGA3 + 0.00 7 7 63 40 S 450367 [Brevibacterium] frigoritolerans + 0.00 3 3 47 35 S 1455 Bacillus badius + 0.00 2 0 81 62 S 1408 Bacillus pumilus + 0.00 2 2 6 4 S1 315750 Bacillus pumilus SAFR-032 + 0.00 2 2 41 28 S 1983719 Bacillus shivajii + 0.00 1 0 27 23 S 324767 Bacillus infantis + 0.00 1 1 27 23 S1 1367477 Bacillus infantis NRRL B-14911 + 0.00 1 1 6 2 S 1925021 Bacillus haynesii + 0.02 5071 0 6695 344 G 150247 Anoxybacillus + 0.02 5062 5062 5277 38 S 2613334 Anoxybacillus sediminis + 0.00 5 0 77 45 G1 2639704 unclassified Anoxybacillus + 0.00 5 5 29 11 S 1636720 Anoxybacillus sp. PDR2 + 0.00 2 2 163 150 S 33934 Anoxybacillus flavithermus + 0.00 1 1 10 7 S 198467 Anoxybacillus gonensis + 0.00 1 1 44 31 S 247480 Anoxybacillus caldiproteolyticus + 0.00 151 20 2290 532 G 400634 Lysinibacillus + 0.00 59 59 191 83 S 1421 Lysinibacillus sphaericus + 0.00 31 31 220 73 S 2086577 Lysinibacillus timonensis + 0.00 20 0 1497 136 G1 2636778 unclassified Lysinibacillus + 0.00 14 14 50 28 S 2070463 Lysinibacillus sp. SGAir0095 + 0.00 4 4 30 25 S 2929796 Lysinibacillus sp. PLM2 + 0.00 2 2 8 6 S 2896845 Lysinibacillus sp. GJ-1 + 0.00 11 11 51 31 S 2590012 Lysinibacillus agricola + 0.00 9 9 76 47 S 436516 Lysinibacillus parviboronicapiens + 0.00 1 1 49 39 S 28031 Lysinibacillus fusiformis + 0.00 135 3 3317 352 G 2675233 Metabacillus + 0.00 86 0 338 179 G1 2675274 unclassified Metabacillus + 0.00 85 85 251 108 S 2897333 Metabacillus sp. B2-18 + 0.00 1 1 43 37 S 2806989 Metabacillus sp. cB07 + 0.00 24 24 77 44 S 1535204 Metabacillus endolithicus + 0.00 11 11 38 23 S 152268 Metabacillus litoralis + 0.00 8 8 2764 34 S 2874282 Metabacillus dongyingensis + 0.00 3 3 58 40 S 2567941 Metabacillus sediminilitoris + 0.00 58 1 1924 408 G 2800373 Priestia + 0.00 28 23 1603 197 S 1404 Priestia megaterium + 0.00 2 2 7 3 S1 545693 Priestia megaterium QM B1551 + 0.00 2 2 21 7 S1 1348623 Priestia megaterium NBRC 15308 = ATCC 14581 + 0.00 1 1 18 11 S1 1006007 Priestia megaterium WSH-002 + 0.00 19 19 100 57 S 86664 Priestia flexa + 0.00 8 8 33 17 S 412384 Priestia aryabhattai + 0.00 2 2 77 61 S 1402861 Priestia filamentosa + 0.00 56 6 1842 397 G 84406 Virgibacillus + 0.00 36 0 1531 181 G1 2620237 unclassified Virgibacillus + 0.00 21 21 35 23 S 1911587 Virgibacillus sp. 6R + 0.00 11 11 57 29 S 2419841 Virgibacillus sp. Bac330 + 0.00 2 2 45 27 S 403957 Virgibacillus sp. SK37 + 0.00 1 1 1319 42 S 2419842 Virgibacillus sp. Bac332 + 0.00 1 1 34 28 S 2831673 Virgibacillus sp. NKC19-16 + 0.00 7 7 18 15 S 1473 Virgibacillus pantothenticus + 0.00 5 5 57 36 S 1482 Virgibacillus halodenitrificans + 0.00 1 1 33 25 S 163877 Virgibacillus necropolis + 0.00 1 1 47 32 S 2017483 Virgibacillus phasianinus + 0.00 53 0 1574 255 G 2675230 Cytobacillus + 0.00 38 21 182 94 S 665099 Cytobacillus oceanisediminis + 0.00 17 17 46 22 S1 1196031 Cytobacillus oceanisediminis 2691 + 0.00 8 8 1238 47 S 859143 Cytobacillus kochii + 0.00 4 4 58 43 S 1670641 Cytobacillus ciccensis + 0.00 3 3 51 39 S 859144 Cytobacillus gottheilii + 0.00 51 20 368 187 G 129337 Geobacillus + 0.00 8 8 60 27 S 129338 Geobacillus subterraneus + 0.00 8 0 40 12 G1 1505648 Geobacillus thermoleovorans group + 0.00 7 7 32 4 S 33941 Geobacillus thermoleovorans + 0.00 1 0 3 3 S 1462 Geobacillus kaustophilus + 0.00 1 1 3 3 S1 235909 Geobacillus kaustophilus HTA426 + 0.00 7 4 19 13 S 33940 Geobacillus thermodenitrificans + 0.00 3 3 9 4 S1 420246 Geobacillus thermodenitrificans NG80-2 + 0.00 6 0 47 23 G1 2642459 unclassified Geobacillus + 0.00 3 3 19 10 S 1233873 Geobacillus sp. GHH01 + 0.00 2 2 9 4 S 691437 Geobacillus sp. C56-T3 + 0.00 1 1 15 6 S 1963025 Geobacillus sp. 46C-IIa + 0.00 2 2 55 22 S 1422 Geobacillus stearothermophilus + 0.00 28 0 366 164 G 2817139 Weizmannia + 0.00 28 20 366 164 S 1398 Weizmannia coagulans + 0.00 5 5 28 8 S1 345219 Weizmannia coagulans 36D1 + 0.00 2 2 9 4 S1 1121088 Weizmannia coagulans DSM 1 = ATCC 7050 + 0.00 1 1 25 13 S1 941639 Weizmannia coagulans 2-6 + 0.00 27 0 2469 174 G 2837506 Niallia + 0.00 22 22 2398 122 S 1397 Niallia circulans + 0.00 5 0 70 51 G1 2837522 unclassified Niallia + 0.00 5 5 70 51 S 2912824 Niallia sp. Man26 + 0.00 23 0 211 154 G 74385 Gracilibacillus + 0.00 16 0 125 83 G1 2625209 unclassified Gracilibacillus + 0.00 15 15 59 38 S 2932255 Gracilibacillus sp. SSPM10-3 + 0.00 1 1 58 39 S 2932256 Gracilibacillus sp. SSWR10-1 + 0.00 7 7 86 71 S 2663022 Gracilibacillus salitolerans + 0.00 18 0 287 196 G 2675229 Peribacillus + 0.00 7 7 80 62 S 228899 Peribacillus asahii + 0.00 6 6 56 29 S 264697 Peribacillus muralis + 0.00 5 5 62 37 S 421767 Peribacillus butanolivorans + 0.00 15 0 743 106 G 2837504 Heyndrickxia + 0.00 12 12 668 55 S 38875 Heyndrickxia oleronia + 0.00 3 3 73 49 S 1476025 Heyndrickxia vini + 0.00 14 2 251 71 G 2685905 Salicibibacter + 0.00 9 9 139 22 S 2099786 Salicibibacter kimchii + 0.00 3 3 16 10 S 2743001 Salicibibacter cibi + 0.00 14 0 77 34 G 2893055 Halalkalibacterium + 0.00 14 1 77 34 S 86665 Halalkalibacterium halodurans + 0.00 13 13 32 9 S1 272558 Halalkalibacterium halodurans C-125 + 0.00 14 0 1525 108 G 2675232 Neobacillus + 0.00 10 10 104 56 S 1193713 Neobacillus mesonae + 0.00 4 4 1421 52 S 220684 Neobacillus drentensis + 0.00 13 0 143 90 G 1221880 Psychrobacillus + 0.00 9 0 64 38 G1 2636677 unclassified Psychrobacillus + 0.00 8 8 63 37 S 2829187 Psychrobacillus sp. INOP01 + 0.00 1 1 1 1 S 2303505 Psychrobacillus sp. AK 1817 + 0.00 4 4 79 52 S 2283160 Psychrobacillus glaciei + 0.00 12 0 1337 142 G 1906945 Parageobacillus + 0.00 7 0 57 30 S 1426 Parageobacillus thermoglucosidasius + 0.00 5 5 19 7 S1 634956 Parageobacillus thermoglucosidasius C56-YS93 + 0.00 2 2 5 1 S1 1136178 Parageobacillus thermoglucosidasius TNO-09.020 + 0.00 4 4 50 31 S 1295642 Parageobacillus genomosp. 1 + 0.00 1 0 46 28 S 153151 Parageobacillus toebii + 0.00 1 1 5 2 S1 1223503 Parageobacillus toebii NBRC 107807 + 0.00 11 0 53 34 G 704093 Anaerobacillus + 0.00 11 11 53 34 S 1532552 Anaerobacillus isosaccharinicus + 0.00 11 0 239 175 G 45667 Halobacillus + 0.00 9 2 120 95 G1 2636472 unclassified Halobacillus + 0.00 5 5 48 42 S 2932259 Halobacillus sp. SSHM10-5 + 0.00 2 2 35 29 S 2932257 Halobacillus sp. SSBR10-3 + 0.00 2 2 27 20 S 402384 Halobacillus mangrovi + 0.00 11 0 158 104 G 2675231 Mesobacillus + 0.00 8 8 77 47 S 279826 Mesobacillus foraminis + 0.00 2 0 35 27 G1 2675270 unclassified Mesobacillus + 0.00 2 2 35 27 S 2880221 Mesobacillus sp. S13 + 0.00 1 1 34 24 S 129985 Mesobacillus jeotgali + 0.00 10 0 220 79 G 1329200 Fictibacillus + 0.00 9 9 169 42 S 255247 Fictibacillus arsenicus + 0.00 1 1 47 34 S 1221500 Fictibacillus phosphorivorans + 0.00 10 3 292 204 G 2675234 Alkalihalobacillus + 0.00 4 4 66 58 S 79880 Alkalihalobacillus clausii + 0.00 1 1 45 32 S 199441 Alkalihalobacillus krulwichiae + 0.00 1 0 29 22 S 300825 Alkalihalobacillus lehensis + 0.00 1 1 29 22 S1 1246626 Alkalihalobacillus lehensis G1 + 0.00 1 0 68 50 G1 2675276 unclassified Alkalihalobacillus + 0.00 1 1 68 50 S 2924032 Alkalihalobacillus sp. LMS39 + 0.00 8 1 120 68 G 459532 Terribacillus + 0.00 7 7 76 36 S 586416 Terribacillus aidingensis + 0.00 7 0 62 31 G 351195 Salimicrobium + 0.00 7 7 62 31 S 1230341 Salimicrobium jeotgali + 0.00 7 0 67 49 G 29331 Amphibacillus + 0.00 7 0 67 49 S 1449 Amphibacillus xylanus + 0.00 7 7 67 49 S1 698758 Amphibacillus xylanus NBRC 15112 + 0.00 7 1 195 152 G 182709 Oceanobacillus + 0.00 3 0 78 62 S 746691 Oceanobacillus kimchii + 0.00 3 3 78 62 S1 1238184 Oceanobacillus kimchii X50 + 0.00 3 3 66 50 S 2052660 Oceanobacillus zhaokaii + 0.00 7 0 90 46 G 482460 Sediminibacillus + 0.00 7 0 90 46 G1 2636913 unclassified Sediminibacillus + 0.00 7 7 90 46 S 2729421 Sediminibacillus sp. DP4-553-S + 0.00 6 0 112 82 G 2837508 Rossellomorea + 0.00 3 3 73 54 S 189381 Rossellomorea marisflavi + 0.00 3 3 39 28 S 218284 Rossellomorea vietnamensis + 0.00 6 0 116 78 G 2785518 Radiobacillus + 0.00 6 6 65 41 S 2594883 Radiobacillus deserti + 0.00 5 0 36 21 G 379065 Caldalkalibacillus + 0.00 5 0 36 21 S 296745 Caldalkalibacillus thermarum + 0.00 5 5 36 21 S1 986075 Caldalkalibacillus thermarum TA2.A1 + 0.00 5 0 121 76 G 289201 Pontibacillus + 0.00 5 0 121 76 G1 2628296 unclassified Pontibacillus + 0.00 4 4 67 42 S 2692425 Pontibacillus sp. HMF3514 + 0.00 1 1 52 33 S 2777185 Pontibacillus sp. ALD_SL1 + 0.00 5 1 100 62 G 175304 Lentibacillus + 0.00 2 2 49 29 S 1472767 Lentibacillus amyloliquefaciens + 0.00 2 0 44 31 G1 2614679 unclassified Lentibacillus + 0.00 2 2 44 31 S 2518176 Lentibacillus sp. CBA3610 + 0.00 5 0 88 46 G 2837485 Evansella + 0.00 5 0 88 46 S 1413 Evansella cellulosilytica + 0.00 5 5 88 46 S1 649639 Evansella cellulosilytica DSM 2522 + 0.00 5 0 1211 46 G 2837503 Gottfriedia + 0.00 5 5 1211 46 S 371036 Gottfriedia acidiceleris + 0.00 4 0 91 51 G 2651279 Pradoshia + 0.00 4 0 91 51 G1 2651280 unclassified Pradoshia + 0.00 4 4 91 51 S 2651284 Pradoshia sp. D12 + 0.00 3 0 65 48 G 1276290 Caldibacillus + 0.00 3 3 65 48 S 35841 Caldibacillus thermoamylovorans + 0.00 3 0 1411 120 G 2837511 Sutcliffiella + 0.00 2 2 111 70 S 79883 Sutcliffiella horikoshii + 0.00 1 1 1300 50 S 33932 Sutcliffiella cohnii + 0.00 1 0 37 27 G 2893060 Alkalihalophilus + 0.00 1 0 37 27 S 79885 Alkalihalophilus pseudofirmus + 0.00 1 1 37 27 S1 398511 Alkalihalophilus pseudofirmus OF4 + 0.00 1 0 46 31 G 1434042 Salisediminibacterium + 0.00 1 0 39 25 S 85683 Salisediminibacterium selenitireducens + 0.00 1 1 39 25 S1 439292 [Bacillus] selenitireducens MLS10 + 0.00 1 0 77 44 G 2804231 Lederbergia + 0.00 1 1 77 44 S 1467 Lederbergia lenta + 0.00 1 0 20 12 G 1609627 Hydrogenibacillus + 0.00 1 0 20 12 G1 2773237 unclassified Hydrogenibacillus + 0.00 1 1 20 12 S 2866627 Hydrogenibacillus sp. N12 + 0.00 1 0 41 28 G 1055323 Aeribacillus + 0.00 1 1 41 28 S 33936 Aeribacillus pallidus + 0.02 5355 0 26978 1935 F 186820 Listeriaceae + 0.02 4200 125 24253 1819 G 1637 Listeria + 0.01 3960 3937 20953 857 S 1639 Listeria monocytogenes + 0.00 13 13 16 14 S1 169963 Listeria monocytogenes EGD-e + 0.00 9 9 63 12 S1 1299895 Listeria monocytogenes CFSAN002349 + 0.00 1 1 8 3 S1 2065118 Listeria monocytogenes serotype 4b + 0.00 61 19 329 109 S 1642 Listeria innocua + 0.00 42 42 156 13 S1 272626 Listeria innocua Clip11262 + 0.00 28 28 297 138 S 1641 Listeria grayi + 0.00 11 8 205 135 S 1638 Listeria ivanovii + 0.00 3 3 75 55 S1 202752 Listeria ivanovii subsp. londoniensis + 0.00 8 0 122 72 G1 2642072 unclassified Listeria + 0.00 8 8 122 72 S 1844999 Listeria sp. PSOL-1 + 0.00 7 1 102 62 S 1640 Listeria seeligeri + 0.00 6 6 23 15 S1 683837 Listeria seeligeri serovar 1/2b str. SLCC3954 + 0.00 1155 0 2722 115 G 2755 Brochothrix + 0.00 1155 1155 2722 115 S 2756 Brochothrix thermosphacta + 0.00 617 29 8946 2237 F 186822 Paenibacillaceae + 0.00 310 6 949 416 G 55080 Brevibacillus + 0.00 287 287 706 257 S 1465 Brevibacillus laterosporus + 0.00 6 4 60 38 S 1393 Brevibacillus brevis + 0.00 2 2 3 2 S1 1200792 Brevibacillus brevis X23 + 0.00 6 0 41 22 G1 2684853 unclassified Brevibacillus + 0.00 5 5 26 11 S 2895522 Brevibacillus sp. MMS20-4M-10-Y + 0.00 1 1 4 4 S 2738979 Brevibacillus sp. HD3.3A + 0.00 4 4 39 13 S 51101 Brevibacillus agri + 0.00 1 1 3 2 S 54914 Brevibacillus parabrevis + 0.00 266 57 7613 1628 G 44249 Paenibacillus + 0.00 31 31 208 50 S 1619311 Paenibacillus physcomitrellae + 0.00 24 3 112 70 S 1464 Paenibacillus larvae + 0.00 21 21 55 32 S1 147375 Paenibacillus larvae subsp. larvae + 0.00 23 0 1735 419 G1 185978 unclassified Paenibacillus + 0.00 6 6 36 23 S 1306526 Paenibacillus sp. HWE-109 + 0.00 4 4 16 7 S 1695218 Paenibacillus sp. 32O-W + 0.00 4 4 27 12 S 2777983 Paenibacillus sp. JNUCC-31 + 0.00 3 3 8 5 S 2871175 Paenibacillus sp. DR312 + 0.00 2 2 2 2 S 58172 Paenibacillus sp. + 0.00 1 1 20 15 S 1536773 Paenibacillus sp. FSL R7-0331 + 0.00 1 1 5 4 S 2069255 Paenibacillus sp. lzh-N1 + 0.00 1 1 1169 16 S 2748863 Paenibacillus sp. E222 + 0.00 1 1 33 21 S 2908839 Paenibacillus sp. YPD9-1 + 0.00 22 22 62 30 S 1616788 Paenibacillus bovis + 0.00 20 0 45 22 G1 2044880 Paenibacillus sonchi group + 0.00 20 20 32 14 S 373687 Paenibacillus sonchi + 0.00 17 17 41 21 S 682956 Paenibacillus jilunlii + 0.00 11 0 32 19 S 683737 Paenibacillus uliginis + 0.00 11 11 32 19 S1 1313296 Paenibacillus uliginis N3/975 + 0.00 7 7 28 20 S 44252 Paenibacillus macerans + 0.00 6 4 167 104 S 1406 Paenibacillus polymyxa + 0.00 2 2 22 13 S1 1429244 Paenibacillus polymyxa CR1 + 0.00 6 6 26 8 S 562959 Paenibacillus cellulositrophicus + 0.00 5 5 34 18 S 1778678 Paenibacillus psychroresistens + 0.00 5 5 1412 21 S 59893 Paenibacillus peoriae + 0.00 5 5 1194 24 S 116718 Paenibacillus azoreducens + 0.00 4 4 18 8 S 2565926 Paenibacillus algicola + 0.00 3 3 32 17 S 2810347 Paenibacillus tianjinensis + 0.00 3 3 23 12 S 2509456 Paenibacillus protaetiae + 0.00 2 2 27 17 S 1178515 Paenibacillus swuensis + 0.00 2 2 30 19 S 128574 Paenibacillus brasilensis + 0.00 2 2 40 15 S 2495582 Paenibacillus albus + 0.00 1 0 10 9 S 365617 Paenibacillus sabinae + 0.00 1 1 10 9 S1 1268072 Paenibacillus sabinae T27 + 0.00 1 1 27 23 S 1473112 Paenibacillus guangzhouensis + 0.00 1 1 21 14 S 1462996 Paenibacillus yonginensis + 0.00 1 1 25 20 S 1338368 Paenibacillus lentus + 0.00 1 0 28 21 S 61624 Paenibacillus mucilaginosus + 0.00 1 1 10 4 S1 1116391 Paenibacillus mucilaginosus 3016 + 0.00 1 1 26 15 S 1712516 Paenibacillus baekrokdamisoli + 0.00 1 1 25 17 S 79263 Paenibacillus chitinolyticus + 0.00 1 1 31 27 S 1763538 Paenibacillus crassostreae + 0.00 1 0 19 17 S 44251 Paenibacillus durus + 0.00 1 1 8 8 S1 1333534 Paenibacillus durus ATCC 35681 + 0.00 1 1 1305 11 S 130049 Paenibacillus dendritiformis + 0.00 1 0 21 7 S 159743 Paenibacillus terrae + 0.00 1 1 21 7 S1 985665 Paenibacillus terrae HPL-003 + 0.00 8 3 104 58 G 329857 Cohnella + 0.00 3 3 23 17 S 2507935 Cohnella abietis + 0.00 1 0 27 16 G1 2636738 unclassified Cohnella + 0.00 1 1 20 12 S 1619153 Cohnella sp. LGH + 0.00 1 1 13 11 S 2674991 Cohnella candidum + 0.00 4 0 88 53 F1 85151 Aneurinibacillus group + 0.00 4 2 88 53 G 55079 Aneurinibacillus + 0.00 2 2 30 21 S 1500254 Aneurinibacillus soli + 0.00 229 5 8795 1461 F 186818 Planococcaceae + 0.00 90 4 732 434 G 1569 Sporosarcina + 0.00 70 0 348 207 G1 2647733 unclassified Sporosarcina + 0.00 64 64 191 100 S 2283194 Sporosarcina sp. PTS2304 + 0.00 4 4 20 11 S 1930546 Sporosarcina sp. P37 + 0.00 2 2 44 33 S 2810514 Sporosarcina sp. Marseille-Q4063 + 0.00 6 6 65 37 S 1474 Sporosarcina pasteurii + 0.00 6 6 122 85 S 1571 Sporosarcina ureae + 0.00 2 2 8 7 S 1476 Sporosarcina psychrophila + 0.00 2 2 58 44 S 298596 Sporosarcina ureilytica + 0.00 55 0 1475 126 G 648800 Solibacillus + 0.00 38 0 202 93 S 76853 Solibacillus silvestris + 0.00 38 38 202 93 S1 1002809 Solibacillus silvestris StLB046 + 0.00 17 0 1273 33 G1 2637870 unclassified Solibacillus + 0.00 17 17 1273 33 S 2048654 Solibacillus sp. R5-41 + 0.00 51 5 3225 489 G 1372 Planococcus + 0.00 20 0 1441 86 G1 2662419 unclassified Planococcus (in: Bacteria) + 0.00 14 14 1365 36 S 2908840 Planococcus sp. 107-1 + 0.00 5 5 45 23 S 2058136 Planococcus sp. MB-3u-03 + 0.00 1 1 29 26 S 1526927 Planococcus sp. PAMC 21323 + 0.00 11 0 62 33 S 161360 Planococcus antarcticus + 0.00 11 11 62 33 S1 1185653 Planococcus antarcticus DSM 14505 + 0.00 8 8 82 31 S 2213202 Planococcus lenghuensis + 0.00 4 4 50 34 S 459472 Planococcus glaciei + 0.00 1 1 45 38 S 192421 Planococcus maritimus + 0.00 1 1 38 32 S 1215089 Planococcus halocryophilus + 0.00 1 1 11 7 S 1598147 Planococcus faecalis + 0.00 9 0 177 101 G 160795 Ureibacillus + 0.00 6 6 68 43 S 51173 Ureibacillus thermosphaericus + 0.00 3 3 90 50 S 367743 Ureibacillus thermophilus + 0.00 8 0 2844 119 G 1649 Kurthia + 0.00 6 0 77 54 G1 2644826 unclassified Kurthia + 0.00 6 6 77 54 S 1750719 Kurthia sp. 11kri321 + 0.00 2 2 2759 59 S 1650 Kurthia zopfii + 0.00 8 0 48 29 G 157226 Jeotgalibacillus + 0.00 8 8 48 29 S 1508404 Jeotgalibacillus malaysiensis + 0.00 2 0 57 34 G 496496 Viridibacillus + 0.00 2 0 57 34 G1 2617942 unclassified Viridibacillus + 0.00 2 2 57 34 S 2779527 Viridibacillus sp. JNUCC-6 + 0.00 1 0 115 64 G 651660 Paenisporosarcina + 0.00 1 1 55 35 S 2320858 Paenisporosarcina cavernae + 0.00 74 0 2112 725 O1 539002 Bacillales incertae sedis + 0.00 40 0 389 255 O2 539742 Bacillales Family XII. Incertae Sedis + 0.00 40 17 389 255 G 33986 Exiguobacterium + 0.00 21 1 141 91 G1 2644629 unclassified Exiguobacterium + 0.00 20 20 29 12 S 1389960 Exiguobacterium sp. S3-2 + 0.00 1 0 30 15 S 132920 Exiguobacterium antarcticum + 0.00 1 1 30 15 S1 1087448 Exiguobacterium antarcticum B7 + 0.00 1 0 24 22 S 332410 Exiguobacterium sibiricum + 0.00 1 1 24 22 S1 262543 Exiguobacterium sibiricum 255-15 + 0.00 34 0 1723 470 O2 539738 Bacillales Family XI. Incertae Sedis + 0.00 34 3 1723 470 G 1378 Gemella + 0.00 16 4 228 190 G1 2624949 unclassified Gemella + 0.00 7 7 42 26 S 2840371 Gemella sp. zg-570 + 0.00 5 5 126 122 S 1785995 Gemella sp. oral taxon 928 + 0.00 8 8 187 148 S 29391 Gemella morbillorum + 0.00 7 7 1220 75 S 1379 Gemella haemolysans + 0.00 46 0 206 100 F 186824 Thermoactinomycetaceae + 0.00 41 0 76 32 G 2023 Thermoactinomyces + 0.00 41 41 76 32 S 2026 Thermoactinomyces vulgaris + 0.00 4 0 48 18 G 292635 Laceyella + 0.00 4 4 48 18 S 37482 Laceyella sacchari + 0.00 1 0 18 8 G 1677050 Novibacillus + 0.00 1 1 18 8 S 1471761 Novibacillus thermophilus + 0.00 13 0 175 90 F 186823 Alicyclobacillaceae + 0.00 5 3 45 28 G 432330 Tumebacillus + 0.00 1 1 7 6 S 1214604 Tumebacillus algifaecis + 0.00 1 1 24 15 S 1903704 Tumebacillus avium + 0.00 4 0 69 38 G 29330 Alicyclobacillus + 0.00 2 2 11 4 S 1450 Alicyclobacillus acidoterrestris + 0.00 2 0 43 27 G1 2622400 unclassified Alicyclobacillus + 0.00 2 2 24 15 S 2665646 Alicyclobacillus sp. SO9 + 0.00 2 1 35 11 G 1129704 Kyrpidia + 0.00 1 1 19 4 S 2055160 Kyrpidia spormannii + 0.00 2 0 26 13 G 1502725 Effusibacillus + 0.00 2 2 26 13 S 2743772 Effusibacillus dendaii + 0.00 6 0 64 42 F 186821 Sporolactobacillaceae + 0.00 6 0 64 42 G 2077 Sporolactobacillus + 0.00 6 6 64 42 S 269673 Sporolactobacillus terrae + 0.02 5962 2 135732 68597 C 186801 Clostridia + 0.02 5908 154 133506 68150 O 186802 Eubacteriales + 0.01 2432 594 68096 55458 F 186803 Lachnospiraceae + 0.00 374 1 14255 13665 G 2316020 Mediterraneibacter + 0.00 351 322 13867 13304 S 33038 [Ruminococcus] gnavus + 0.00 29 29 406 385 S1 411470 [Ruminococcus] gnavus ATCC 29149 + 0.00 22 0 317 296 S 33039 [Ruminococcus] torques + 0.00 22 22 317 296 S1 657313 [Ruminococcus] torques L2-14 + 0.00 365 41 5564 5116 G 572511 Blautia + 0.00 86 0 685 550 S 40520 Blautia obeum + 0.00 86 86 685 550 S1 657314 Blautia obeum A2-162 + 0.00 61 0 851 796 G1 2648079 unclassified Blautia + 0.00 42 42 464 433 S 2479767 Blautia sp. SC05B48 + 0.00 19 19 387 363 S 2877527 Blautia sp. NBRC 113351 + 0.00 55 55 1707 1650 S 33035 Blautia producta + 0.00 40 40 416 384 S 1737424 Blautia massiliensis + 0.00 31 31 404 398 S 1912897 Blautia argi + 0.00 24 0 197 188 S 1322 Blautia hansenii + 0.00 24 24 197 188 S1 537007 Blautia hansenii DSM 20583 + 0.00 20 20 105 67 S 1796616 Blautia pseudococcoides + 0.00 7 7 43 40 S 2779518 Blautia liquoris + 0.00 344 2 17788 11231 G 207244 Anaerostipes + 0.00 333 333 17525 11007 S 649756 Anaerostipes hadrus + 0.00 5 3 203 178 S 105841 Anaerostipes caccae + 0.00 2 2 66 66 S1 411490 Anaerostipes caccae L1-92 + 0.00 4 4 32 27 S 1229621 Anaerostipes rhamnosivorans + 0.00 149 0 4790 4540 G 2569097 Anaerobutyricum + 0.00 149 149 4790 4540 S 39488 Anaerobutyricum hallii + 0.00 143 1 2379 2245 G 33042 Coprococcus + 0.00 102 102 1952 1860 S 410072 Coprococcus comes + 0.00 27 27 235 208 S 116085 Coprococcus catus + 0.00 7 0 89 83 G1 2684943 unclassified Coprococcus + 0.00 7 7 89 83 S 751585 Coprococcus sp. ART55/1 + 0.00 6 0 33 30 S 33043 Coprococcus eutactus + 0.00 6 6 33 30 S1 411474 Coprococcus eutactus ATCC 27759 + 0.00 114 1 3471 3133 G 2719313 Enterocloster + 0.00 88 88 3257 2954 S 208479 Enterocloster bolteae + 0.00 25 25 137 116 S 1531 Enterocloster clostridioformis + 0.00 83 0 3800 3457 G 1769710 Sellimonas + 0.00 83 83 3800 3457 S 1653434 Sellimonas intestinalis + 0.00 78 0 729 665 G 1506553 Lachnoclostridium + 0.00 56 56 482 438 S 29347 [Clostridium] scindens + 0.00 9 0 74 71 G1 2608895 unclassified Lachnoclostridium + 0.00 9 9 74 71 S 1834196 Lachnoclostridium sp. YL32 + 0.00 7 7 70 69 S 1871021 Lachnoclostridium phocaeense + 0.00 5 5 71 59 S 89153 [Clostridium] hylemonae + 0.00 1 0 31 27 S 66219 Lachnoclostridium phytofermentans + 0.00 1 1 31 27 S1 357809 Lachnoclostridium phytofermentans ISDg + 0.00 50 0 480 434 G 2005359 Faecalicatena + 0.00 50 0 480 434 G1 2635385 unclassified Faecalicatena + 0.00 50 50 480 434 S 2823316 Faecalicatena sp. Marseille-Q4148 + 0.00 45 4 710 657 G 841 Roseburia + 0.00 21 5 364 348 S 166486 Roseburia intestinalis + 0.00 7 7 128 128 S1 718255 Roseburia intestinalis XB6B4 + 0.00 6 6 56 49 S1 536231 Roseburia intestinalis L1-82 + 0.00 3 3 94 92 S1 657315 Roseburia intestinalis M50/1 + 0.00 14 14 135 125 S 301301 Roseburia hominis + 0.00 6 0 69 67 G1 2637578 unclassified Roseburia + 0.00 6 6 69 67 S 2763062 Roseburia sp. NSJ-69 + 0.00 31 0 378 334 G 189330 Dorea + 0.00 31 31 378 334 S 88431 Dorea longicatena + 0.00 17 0 1439 98 G 1843210 Anaerocolumna + 0.00 12 12 57 38 S 433286 Anaerocolumna cellulosilytica + 0.00 4 4 35 28 S 2696063 Anaerocolumna sedimenticola + 0.00 1 1 1343 30 S 1727145 Anaerocolumna chitinilytica + 0.00 14 0 143 118 G 28050 Lachnospira + 0.00 14 14 143 118 S 39485 Lachnospira eligens + 0.00 14 0 82 66 G 830 Butyrivibrio + 0.00 9 9 43 31 S 831 Butyrivibrio fibrisolvens + 0.00 4 0 23 19 S 43305 Butyrivibrio proteoclasticus + 0.00 4 4 23 19 S1 515622 Butyrivibrio proteoclasticus B316 + 0.00 1 1 15 15 S 185008 Butyrivibrio hungatei + 0.00 8 0 75 59 G 2888809 Novisyntrophococcus + 0.00 8 8 75 59 S 2068655 Novisyntrophococcus fermenticellae + 0.00 5 0 38 30 G 46205 Pseudobutyrivibrio + 0.00 5 5 38 30 S 185007 Pseudobutyrivibrio xylanivorans + 0.00 2 0 55 50 G 2719231 Lacrimispora + 0.00 1 0 19 18 S 29370 Lacrimispora sphenoides + 0.00 1 1 19 18 S1 1297793 [Clostridium] sphenoides JCM 1415 + 0.00 1 1 35 31 S 84030 Lacrimispora saccharolytica + 0.00 1 1 67 44 G 698776 Cellulosilyticum + 0.00 1 0 14 11 G 2039240 Anaerotignum + 0.00 1 0 14 11 S 28446 Anaerotignum propionicum + 0.00 1 1 14 11 S1 991789 Anaerotignum propionicum DSM 1682 + 0.01 1573 1 10883 1523 F 216572 Oscillospiraceae + 0.01 1403 0 6787 53 G 1905344 Ruthenibacterium + 0.01 1403 1403 6787 53 S 1550024 Ruthenibacterium lactatiformans + 0.00 34 0 71 38 G 2304693 Pseudoclostridium + 0.00 34 34 71 38 S 84032 Pseudoclostridium thermosuccinogenes + 0.00 33 0 1332 8 G 1738645 Caproiciproducens + 0.00 33 0 1332 8 G1 2643836 unclassified Caproiciproducens + 0.00 33 33 1332 8 S 2507162 Caproiciproducens sp. NJN-50 + 0.00 27 2 586 550 G 216851 Faecalibacterium + 0.00 25 16 462 426 S 853 Faecalibacterium prausnitzii + 0.00 5 5 65 65 S1 718252 Faecalibacterium prausnitzii L2-6 + 0.00 4 4 132 131 S1 657322 Faecalibacterium prausnitzii SL3/3 + 0.00 20 0 1041 50 G 2842531 Solibaculum + 0.00 20 20 1041 50 S 2780922 Solibaculum mannosilyticum + 0.00 20 0 470 417 G 946234 Flavonifractor + 0.00 20 20 470 417 S 292800 Flavonifractor plautii + 0.00 9 1 92 71 G 35829 Acetivibrio + 0.00 6 6 22 12 S 1515 Acetivibrio thermocellus + 0.00 2 0 52 44 S 288965 Acetivibrio clariflavus + 0.00 2 2 52 44 S1 720554 Acetivibrio clariflavus DSM 19732 + 0.00 6 0 36 19 G 2039302 Monoglobus + 0.00 6 6 36 19 S 1981510 Monoglobus pectinilyticus + 0.00 5 1 63 62 G 2892396 Vescimonas + 0.00 3 3 53 53 S 2714353 Vescimonas fastidiosa + 0.00 1 1 3 3 S 2714355 Vescimonas coprocola + 0.00 4 0 53 34 G 1508657 Ruminiclostridium + 0.00 3 0 32 19 S 1521 Ruminiclostridium cellulolyticum + 0.00 3 3 32 19 S1 394503 Ruminiclostridium cellulolyticum H10 + 0.00 1 1 21 15 S 2488810 Ruminiclostridium herbifermentans + 0.00 3 0 16 9 G 1637257 Mageeibacillus + 0.00 3 0 16 9 S 884684 Mageeibacillus indolicus + 0.00 3 3 16 9 S1 699246 Mageeibacillus indolicus UPII9-5 + 0.00 3 0 35 8 G 2304691 Thermoclostridium + 0.00 3 3 35 8 S 1510 Thermoclostridium stercorarium + 0.00 2 0 57 40 G 1263 Ruminococcus + 0.00 1 1 9 6 S 1161942 Ruminococcus champanellensis + 0.00 1 1 17 14 S 2564099 Ruminococcus bovis + 0.00 2 0 24 23 G 2892397 Pusillibacter + 0.00 2 2 24 23 S 2714358 Pusillibacter faecalis + 0.00 1 0 9 6 G 244127 Anaerotruncus + 0.00 1 1 9 6 S 169435 Anaerotruncus colihominis + 0.00 1293 0 6732 1313 F 186804 Peptostreptococcaceae + 0.00 1273 1 3931 1005 G 1870884 Clostridioides + 0.00 1266 1251 3848 944 S 1496 Clostridioides difficile + 0.00 5 5 30 8 S1 699037 Clostridioides difficile M68 + 0.00 4 4 15 10 S1 699033 Clostridioides difficile 2007855 + 0.00 3 3 7 7 S1 499174 Clostridioides difficile QCD-23m63 + 0.00 1 1 3 2 S1 479831 Clostridioides difficile QCD-63q42 + 0.00 1 1 7 5 S1 699035 Clostridioides difficile M120 + 0.00 1 1 26 9 S1 272563 Clostridioides difficile 630 + 0.00 6 2 48 39 G1 2635829 unclassified Clostridioides + 0.00 2 2 22 16 S 2770780 Clostridioides sp. ES-S-0054-01 + 0.00 2 2 4 4 S 2770788 Clostridioides sp. ES-W-0016-02 + 0.00 7 0 206 138 G 44259 Filifactor + 0.00 7 0 206 138 S 143361 Filifactor alocis + 0.00 7 7 206 138 S1 546269 Filifactor alocis ATCC 35896 + 0.00 5 0 51 44 G 2743582 Peptacetobacter + 0.00 5 5 51 44 S 89152 Peptacetobacter hiranonis + 0.00 3 0 2403 38 G 1501226 Romboutsia + 0.00 2 0 2360 20 G1 2626894 unclassified Romboutsia + 0.00 2 2 2360 20 S 2724150 Romboutsia sp. CE17 + 0.00 1 1 11 8 S 1507512 Romboutsia hominis + 0.00 2 0 15 9 G 1481960 Peptoclostridium + 0.00 2 0 15 9 S 1731 Peptoclostridium acidaminophilum + 0.00 2 2 15 9 S1 1286171 Peptoclostridium acidaminophilum DSM 3953 + 0.00 1 0 38 13 G 186831 Acetoanaerobium + 0.00 1 1 38 13 S 1511 Acetoanaerobium sticklandii + 0.00 1 0 25 17 G 1505652 Terrisporobacter + 0.00 1 0 25 17 G1 2633511 unclassified Terrisporobacter + 0.00 1 1 25 17 S 2813371 Terrisporobacter sp. MCA3 + 0.00 1 0 37 29 G 1849828 Paeniclostridium + 0.00 1 1 37 29 S 1505 Paeniclostridium sordellii + 0.00 264 2 15488 1959 F 31979 Clostridiaceae + 0.00 246 18 13981 1657 G 1485 Clostridium + 0.00 77 15 2338 149 S 1502 Clostridium perfringens + 0.00 61 61 2130 5 S1 883064 Clostridium perfringens F262 + 0.00 1 1 4 1 S1 289380 Clostridium perfringens SM101 + 0.00 35 34 1167 21 S 1513 Clostridium tetani + 0.00 1 1 4 2 S1 212717 Clostridium tetani E88 + 0.00 31 0 5115 371 G1 2614128 unclassified Clostridium + 0.00 9 9 59 27 S 2507159 Clostridium sp. JN-9 + 0.00 8 8 145 125 S 411486 Clostridium sp. M62/1 + 0.00 4 4 4639 51 S 641107 Clostridium sp. DL-VIII + 0.00 3 3 36 19 S 2779445 Clostridium sp. 'deep sea' + 0.00 2 2 36 26 S 704125 Clostridium sp. C5S11 + 0.00 2 2 19 14 S 1042156 Clostridium sp. SY8519 + 0.00 2 2 62 44 S 1155388 Clostridium sp. C1 + 0.00 1 1 11 3 S 1702238 Clostridium sp. MF28 + 0.00 12 5 1408 121 S 1491 Clostridium botulinum + 0.00 5 5 43 10 S1 1408284 Clostridium botulinum Prevot_594 + 0.00 2 2 16 11 S1 929506 Clostridium botulinum BKT015925 + 0.00 12 12 48 31 S 36845 Clostridium intestinale + 0.00 11 11 34 22 S 1519 Clostridium tyrobutyricum + 0.00 11 11 101 65 S 1520 Clostridium beijerinckii + 0.00 6 6 27 14 S 1494 Clostridium cochlearium + 0.00 5 5 40 28 S 29341 Clostridium argentinense + 0.00 4 4 39 21 S 1716543 Clostridium thermarum + 0.00 4 4 120 76 S 1534 Clostridium kluyveri + 0.00 3 0 50 39 S 1501 Clostridium pasteurianum + 0.00 3 3 31 24 S1 86416 Clostridium pasteurianum BC1 + 0.00 3 3 28 24 S 1509 Clostridium sporogenes + 0.00 3 3 25 13 S 1529 Clostridium cadaveris + 0.00 3 3 51 18 S 182773 Clostridium isatidis + 0.00 3 3 19 15 S 1497 Clostridium formicaceticum + 0.00 1 1 77 49 S 1492 Clostridium butyricum + 0.00 1 1 1187 26 S 2320868 Clostridium manihotivorum + 0.00 1 0 22 12 S 217159 Clostridium carboxidivorans + 0.00 1 1 22 12 S1 536227 Clostridium carboxidivorans P7 + 0.00 1 1 38 25 S 169679 Clostridium saccharobutylicum + 0.00 1 1 51 33 S 1561 Clostridium baratii + 0.00 6 0 45 41 G 1649459 Hungatella + 0.00 6 0 45 41 S 154046 Hungatella hathewayi + 0.00 6 6 45 41 S1 742737 Hungatella hathewayi WAL-18680 + 0.00 4 1 91 63 G 114627 Alkaliphilus + 0.00 1 0 28 21 S 208226 Alkaliphilus metalliredigens + 0.00 1 1 28 21 S1 293826 Alkaliphilus metalliredigens QYMF + 0.00 1 0 44 27 S 461876 Alkaliphilus oremlandii + 0.00 1 1 44 27 S1 350688 Alkaliphilus oremlandii OhILAs + 0.00 1 0 18 14 G1 2646756 unclassified Alkaliphilus + 0.00 1 1 18 14 S 2731219 Alkaliphilus sp. B6464 + 0.00 2 0 32 14 G 1266 Sarcina + 0.00 2 0 32 14 G1 2619470 unclassified Sarcina + 0.00 2 2 32 14 S 2726954 Sarcina sp. JB2 + 0.00 2 0 1132 39 G 1849822 Paraclostridium + 0.00 2 2 1132 39 S 1490 Paraclostridium bifermentans + 0.00 2 0 46 23 G 1890059 Serpentinicella + 0.00 2 2 46 23 S 1734049 Serpentinicella alkaliphila + 0.00 68 0 2052 1885 F 186806 Eubacteriaceae + 0.00 61 0 1964 1845 G 1730 Eubacterium + 0.00 60 0 1914 1808 G1 2624479 unclassified Eubacterium + 0.00 56 56 1811 1716 S 2764325 Eubacterium sp. NSJ-61 + 0.00 2 2 59 51 S 2841037 Eubacterium sp. c-25 + 0.00 2 2 44 41 S 2841528 Eubacterium sp. MSJ-33 + 0.00 1 1 14 7 S 1736 Eubacterium limosum + 0.00 5 0 46 26 G 33951 Acetobacterium + 0.00 4 0 34 20 S 33952 Acetobacterium woodii + 0.00 4 4 34 20 S1 931626 Acetobacterium woodii DSM 1030 + 0.00 1 0 12 6 G1 2638182 unclassified Acetobacterium + 0.00 1 1 12 6 S 2184575 Acetobacterium sp. KB-1 + 0.00 2 0 35 13 G 274470 Alkalibacter + 0.00 2 0 35 13 G1 2619948 unclassified Alkalibacter + 0.00 2 2 35 13 S 2815577 Alkalibacter sp. ES005 + 0.00 63 0 898 642 O1 538999 Eubacteriales incertae sedis + 0.00 44 1 738 524 F 543314 Eubacteriales Family XIII. Incertae Sedis + 0.00 34 1 649 461 G 86331 Mogibacterium + 0.00 25 25 485 309 S 86332 Mogibacterium pumilum + 0.00 8 8 95 92 S 114527 Mogibacterium diversum + 0.00 5 2 54 34 G 2060094 Aminipila + 0.00 1 1 8 6 S 433296 Aminipila butyrica + 0.00 1 1 24 14 S 2507160 Aminipila luticellarii + 0.00 1 1 14 11 S 2697030 Aminipila terrae + 0.00 4 0 25 19 G 1926556 Emergencia + 0.00 4 4 25 19 S 1776384 Emergencia timonensis + 0.00 7 0 82 80 G 2717089 Massilistercora + 0.00 7 7 82 80 S 2086584 Massilistercora timonensis + 0.00 5 0 41 16 G 1392389 Intestinimonas + 0.00 5 5 41 16 S 1297617 Intestinimonas butyriciproducens + 0.00 3 0 18 10 F 543347 Clostridiales Family XVI. Incertae Sedis + 0.00 3 0 18 10 G 178898 Carboxydocella + 0.00 3 3 18 10 S 178899 Carboxydocella thermautotrophica + 0.00 3 0 10 6 G 1918454 Flintibacter + 0.00 3 0 10 6 G1 2610894 unclassified Flintibacter + 0.00 3 3 10 6 S 2610895 Flintibacter sp. KGMB00164 + 0.00 1 0 9 6 F 539000 Clostridiales Family XVII. Incertae Sedis + 0.00 1 0 9 6 G 73918 Thermaerobacter + 0.00 1 0 3 1 S 73919 Thermaerobacter marianensis + 0.00 1 1 3 1 S1 644966 Thermaerobacter marianensis DSM 12885 + 0.00 20 0 78 39 F 990719 Christensenellaceae + 0.00 20 0 78 39 G 990721 Christensenella + 0.00 20 20 72 34 S 626937 Christensenella minuta + 0.00 10 9 94 34 F 68298 Syntrophomonadaceae + 0.00 1 0 6 5 G 129001 Syntrophothermus + 0.00 1 0 6 5 S 86170 Syntrophothermus lipocalidus + 0.00 1 1 6 5 S1 643648 Syntrophothermus lipocalidus DSM 12680 + 0.00 7 1 251 171 F 2937909 Desulfitobacteriaceae + 0.00 5 0 85 54 G 36853 Desulfitobacterium + 0.00 3 0 40 22 S 142877 Desulfitobacterium metallireducens + 0.00 3 3 40 22 S1 871968 Desulfitobacterium metallireducens DSM 15288 + 0.00 1 0 6 6 S 49338 Desulfitobacterium hafniense + 0.00 1 1 5 5 S1 138119 Desulfitobacterium hafniense Y51 + 0.00 1 0 20 13 S 233055 Desulfitobacterium dichloroeliminans + 0.00 1 1 20 13 S1 871963 Desulfitobacterium dichloroeliminans LMG P-21439 + 0.00 1 0 123 87 G 79206 Desulfosporosinus + 0.00 1 0 44 23 S 79209 Desulfosporosinus meridiei + 0.00 1 1 44 23 S1 768704 Desulfosporosinus meridiei DSM 13257 + 0.00 6 0 32 17 F 31984 Heliobacteriaceae + 0.00 5 0 20 6 G 2831443 Heliomicrobium + 0.00 5 0 20 6 S 35701 Heliomicrobium modesticaldum + 0.00 5 5 20 6 S1 498761 Heliomicrobium modesticaldum Ice1 + 0.00 1 0 12 11 G 79598 Heliorestis + 0.00 1 1 12 11 S 356322 Heliorestis convoluta + 0.00 6 0 14212 67 F 186807 Peptococcaceae + 0.00 4 0 14135 26 G 2916693 Desulforamulus + 0.00 2 0 19 8 S 59610 Desulforamulus reducens + 0.00 2 2 19 8 S1 349161 Desulforamulus reducens MI-1 + 0.00 1 0 13 8 S 1564 Desulforamulus ruminis + 0.00 1 1 13 8 S1 696281 Desulforamulus ruminis DSM 2154 + 0.00 1 1 14103 10 S 1833852 Desulforamulus ferrireducens + 0.00 1 0 7 3 G 471826 Candidatus Desulforudis + 0.00 1 1 7 3 S 471827 Candidatus Desulforudis audaxviator + 0.00 1 0 12 7 G 2282742 Desulfofarcimen + 0.00 1 0 12 7 S 58138 Desulfofarcimen acetoxidans + 0.00 1 1 12 7 S1 485916 Desulfofarcimen acetoxidans DSM 771 + 0.00 5 0 21 9 F 543349 Symbiobacteriaceae + 0.00 5 0 21 9 G 2733 Symbiobacterium + 0.00 5 0 21 9 S 2734 Symbiobacterium thermophilum + 0.00 5 5 21 9 S1 292459 Symbiobacterium thermophilum IAM 14863 + 0.00 5 0 30 16 F 2867375 Desulfallaceae + 0.00 5 0 30 16 G 2867376 Desulfoscipio + 0.00 5 0 30 16 S 102134 Desulfoscipio gibsoniae + 0.00 5 5 30 16 S1 767817 Desulfoscipio gibsoniae DSM 7213 + 0.00 1 0 99 61 F 2603322 Vallitaleaceae + 0.00 1 0 20 13 G 2603323 Petrocella + 0.00 1 1 20 13 S 2173034 Petrocella atlantisensis + 0.00 1 0 53 21 F 1491775 Proteinivoraceae + 0.00 1 0 53 21 G 2838170 Alkalicella + 0.00 1 1 53 21 S 2731377 Alkalicella caledoniensis + 0.00 30 0 404 231 O 68295 Thermoanaerobacterales + 0.00 14 1 156 75 F 186814 Thermoanaerobacteraceae + 0.00 9 0 49 13 F1 42857 Moorella group + 0.00 9 7 47 12 G 44260 Moorella + 0.00 2 2 28 7 S 1525 Moorella thermoacetica + 0.00 3 0 17 10 G 249529 Caldanaerobacter + 0.00 3 0 17 10 S 911092 Caldanaerobacter subterraneus + 0.00 3 0 17 10 S1 119072 Caldanaerobacter subterraneus subsp. tengcongensis + 0.00 3 3 17 10 S2 273068 Caldanaerobacter subterraneus subsp. tengcongensis MB4 + 0.00 1 0 59 35 G 1754 Thermoanaerobacter + 0.00 1 0 8 5 S 583357 Thermoanaerobacter mathranii + 0.00 1 0 8 5 S1 57481 Thermoanaerobacter mathranii subsp. mathranii + 0.00 1 1 8 5 S2 583358 Thermoanaerobacter mathranii subsp. mathranii str. A3 + 0.00 9 0 160 121 F 543371 Thermoanaerobacterales Family III. Incertae Sedis + 0.00 5 4 104 79 G 44000 Caldicellulosiruptor + 0.00 1 0 10 10 S 717609 Caldicellulosiruptor obsidiansis + 0.00 1 1 10 10 S1 608506 Caldicellulosiruptor obsidiansis OB47 + 0.00 4 0 56 42 G 28895 Thermoanaerobacterium + 0.00 2 0 7 5 S 29329 Thermoanaerobacterium xylanolyticum + 0.00 2 2 7 5 S1 858215 Thermoanaerobacterium xylanolyticum LX-11 + 0.00 2 0 14 11 G1 2622527 unclassified Thermoanaerobacterium + 0.00 2 2 14 11 S 1550240 Thermoanaerobacterium sp. RBIITD + 0.00 6 0 49 14 F 543372 Thermoanaerobacterales Family IV. Incertae Sedis + 0.00 6 0 49 14 G 252965 Mahella + 0.00 6 0 49 14 S 252966 Mahella australiensis + 0.00 6 6 49 14 S1 697281 Mahella australiensis 50-1 BON + 0.00 1 0 25 13 F 227387 Thermodesulfobiaceae + 0.00 1 1 25 13 G 227388 Thermodesulfobium + 0.00 9 0 70 34 O 485256 Natranaerobiales + 0.00 6 0 26 13 F 2807496 Natranaerofabaceae + 0.00 6 0 26 13 G 2807497 Natranaerofaba + 0.00 6 6 26 13 S 2742683 Natranaerofaba carboxydovora + 0.00 3 0 39 19 F 485255 Natranaerobiaceae + 0.00 3 0 39 19 G 375928 Natranaerobius + 0.00 3 0 39 19 S 375929 Natranaerobius thermophilus + 0.00 3 3 39 19 S1 457570 Natranaerobius thermophilus JW/NM-WN-LF + 0.00 8 0 49 21 O 2770089 Thermosediminibacterales + 0.00 8 0 42 17 F 2770092 Tepidanaerobacteraceae + 0.00 7 0 16 3 G 2770094 Biomaibacter + 0.00 7 7 16 3 S 2316383 Biomaibacter acetigenes + 0.00 1 0 26 14 G 499228 Tepidanaerobacter + 0.00 1 0 26 14 S 499229 Tepidanaerobacter acetatoxydans + 0.00 1 1 26 14 S1 1209989 Tepidanaerobacter acetatoxydans Re1 + 0.00 5 0 1576 89 O 53433 Halanaerobiales + 0.00 3 0 38 25 F 53434 Halobacteroidaceae + 0.00 2 0 19 10 G 28186 Acetohalobium + 0.00 2 0 19 10 S 28187 Acetohalobium arabaticum + 0.00 2 2 19 10 S1 574087 Acetohalobium arabaticum DSM 5501 + 0.00 1 0 19 15 G 42417 Halobacteroides + 0.00 1 0 19 15 S 42422 Halobacteroides halobius + 0.00 1 1 19 15 S1 748449 Halobacteroides halobius DSM 5150 + 0.00 1 0 1514 44 F 972 Halanaerobiaceae + 0.00 1 0 43 26 G 2330 Halanaerobium + 0.00 1 0 26 14 S 2331 Halanaerobium praevalens + 0.00 1 1 26 14 S1 572479 Halanaerobium praevalens DSM 2228 + 0.00 1 0 22 19 O1 387655 Halanaerobiales incertae sedis + 0.00 1 0 22 19 G 1769008 Anoxybacter + 0.00 1 1 22 19 S 1323375 Anoxybacter fermentans + 0.00 917 1 32318 8668 C 909932 Negativicutes + 0.00 878 0 30804 7515 O 1843489 Veillonellales + 0.00 878 0 30804 7515 F 31977 Veillonellaceae + 0.00 866 1 30600 7350 G 29465 Veillonella + 0.00 857 852 28929 6880 S 29466 Veillonella parvula + 0.00 5 5 28 27 S1 1316254 Veillonella parvula HSIVP1 + 0.00 4 4 64 44 S 39777 Veillonella atypica + 0.00 2 0 28 24 G1 2630086 unclassified Veillonella + 0.00 2 2 28 24 S 2682455 Veillonella sp. S12025-13 + 0.00 1 1 27 23 S 39778 Veillonella dispar + 0.00 1 1 10 10 S 2682456 Veillonella nakazawae + 0.00 9 0 53 29 G 906 Megasphaera + 0.00 8 2 20 10 S 907 Megasphaera elsdenii + 0.00 6 6 6 1 S1 1458465 Megasphaera elsdenii 14-14 + 0.00 1 1 9 9 S 2144175 Megasphaera stantonii + 0.00 3 0 144 136 G 39948 Dialister + 0.00 3 3 131 128 S 39950 Dialister pneumosintes + 0.00 28 0 1249 977 O 1843488 Acidaminococcales + 0.00 28 1 1249 977 F 909930 Acidaminococcaceae + 0.00 22 0 1067 888 G 33024 Phascolarctobacterium + 0.00 21 21 1053 878 S 33025 Phascolarctobacterium faecium + 0.00 1 0 7 6 G1 2639160 unclassified Phascolarctobacterium + 0.00 1 1 7 6 S 2823317 Phascolarctobacterium sp. Marseille-Q4147 + 0.00 5 2 170 87 G 904 Acidaminococcus + 0.00 3 3 160 82 S 187327 Acidaminococcus intestini + 0.00 10 0 250 165 O 909929 Selenomonadales + 0.00 7 0 104 67 F 1843490 Sporomusaceae + 0.00 4 0 22 15 G 2093783 Methylomusa + 0.00 4 4 22 15 S 1930071 Methylomusa anaerophila + 0.00 2 0 72 42 G 365348 Pelosinus + 0.00 1 0 41 20 S 365349 Pelosinus fermentans + 0.00 1 1 41 20 S1 1192197 Pelosinus fermentans JBW45 + 0.00 1 0 31 22 G1 2629460 unclassified Pelosinus + 0.00 1 1 31 22 S 484770 Pelosinus sp. UFO1 + 0.00 1 0 10 10 G 2375 Sporomusa + 0.00 1 1 10 10 S 2377 Sporomusa termitida + 0.00 3 0 146 98 F 1843491 Selenomonadaceae + 0.00 2 0 72 50 G 158846 Megamonas + 0.00 1 1 28 20 S 158847 Megamonas hypermegale + 0.00 1 1 39 28 S 437897 Megamonas funiformis + 0.00 1 1 42 29 G 970 Selenomonas + 0.00 646 0 26164 21602 C 1737404 Tissierellia + 0.00 642 0 26126 21575 O 1737405 Tissierellales + 0.00 636 0 25999 21486 F 1570339 Peptoniphilaceae + 0.00 625 0 25619 21193 G 543311 Parvimonas + 0.00 625 625 25619 21193 S 33033 Parvimonas micra + 0.00 7 0 100 90 G 162289 Peptoniphilus + 0.00 6 6 78 74 S 54006 Peptoniphilus ivorii + 0.00 1 1 22 16 S 54005 Peptoniphilus harei + 0.00 3 0 91 50 G 165779 Anaerococcus + 0.00 1 0 30 14 S 33034 Anaerococcus prevotii + 0.00 1 1 30 14 S1 525919 Anaerococcus prevotii DSM 20548 + 0.00 1 1 8 7 S 33037 Anaerococcus vaginalis + 0.00 1 1 19 15 S 1870984 Anaerococcus mediterraneensis + 0.00 1 0 54 43 G 150022 Finegoldia + 0.00 1 0 54 43 S 1260 Finegoldia magna + 0.00 1 1 14 11 S1 525282 Finegoldia magna ATCC 53516 + 0.00 4 1 81 45 F 1737406 Tissierellaceae + 0.00 3 0 21 11 G 41273 Tissierella + 0.00 3 0 21 11 G1 2638726 unclassified Tissierella + 0.00 3 3 21 11 S 2507161 Tissierella sp. JN-28 + 0.00 2 0 24 22 F 2042895 Gottschalkiaceae + 0.00 2 0 24 22 G 1505664 Gottschalkia + 0.00 2 0 24 22 S 1556 Gottschalkia acidurici + 0.00 2 2 24 22 S1 1128398 Gottschalkia acidurici 9a + 0.00 4 0 32 21 C1 1737407 Tissierellia incertae sedis + 0.00 3 0 17 7 G 1582879 Ezakiella + 0.00 3 3 17 7 S 1852374 Ezakiella massiliensis + 0.00 1 0 15 14 G 190972 Sedimentibacter + 0.00 1 0 15 14 G1 2649220 unclassified Sedimentibacter + 0.00 1 1 15 14 S 2816908 Sedimentibacter sp. zth1 + 0.00 491 0 15442 10976 C 526524 Erysipelotrichia + 0.00 491 0 15442 10976 O 526525 Erysipelotrichales + 0.00 468 15 15220 10840 F 128827 Erysipelotrichaceae + 0.00 145 0 6200 5946 G 2749267 Amedibacterium + 0.00 145 145 6200 5946 S 2583452 Amedibacterium intestinale + 0.00 141 0 3665 3471 G 1505663 Erysipelatoclostridium + 0.00 73 73 825 753 S 1522 [Clostridium] innocuum + 0.00 68 67 2840 2719 S 1547 Erysipelatoclostridium ramosum + 0.00 1 1 1 1 S1 445974 Erysipelatoclostridium ramosum DSM 1402 + 0.00 98 0 1000 92 G 2678885 Faecalibacillus + 0.00 98 98 1000 92 S 1982626 Faecalibacillus intestinalis + 0.00 31 0 3085 189 G 1647 Erysipelothrix + 0.00 17 17 1847 26 S 1514105 Erysipelothrix larvae + 0.00 14 14 1055 32 S 1648 Erysipelothrix rhusiopathiae + 0.00 25 0 640 625 G 1918536 Longicatena + 0.00 25 25 640 625 S 1796635 Longicatena caecimuris + 0.00 6 0 51 36 G 2679910 Intestinibaculum + 0.00 6 6 51 36 S 2487118 Intestinibaculum porci + 0.00 2 0 54 28 G 174708 Allobaculum + 0.00 1 0 12 10 G1 2623473 unclassified Allobaculum + 0.00 1 1 12 10 S 2853432 Allobaculum sp. Allo2 + 0.00 1 1 41 17 S 2834459 Allobaculum mucolyticum + 0.00 2 0 78 64 G 1573534 Faecalitalea + 0.00 2 0 78 64 S 39483 Faecalitalea cylindroides + 0.00 2 2 78 64 S1 717960 Faecalitalea cylindroides T2-87 + 0.00 2 0 14 13 G 1729679 Faecalibaculum + 0.00 2 2 14 13 S 1702221 Faecalibaculum rodentium + 0.00 1 0 28 17 G 118747 Bulleidia + 0.00 1 0 28 17 G1 2704656 unclassified Bulleidia + 0.00 1 1 28 17 S 2806552 Bulleidia sp. zg-1006 + 0.00 23 0 208 130 F 2810281 Turicibacteraceae + 0.00 23 2 208 130 G 191303 Turicibacter + 0.00 20 4 146 82 G1 2638206 unclassified Turicibacter + 0.00 10 10 66 36 S 2806443 Turicibacter sp. TJ11 + 0.00 6 6 66 40 S 1712675 Turicibacter sp. H121 + 0.00 1 1 38 33 S 154288 Turicibacter sanguinis + 0.00 1 0 2709 23 P1 84086 unclassified Firmicutes sensu stricto + 0.00 1 1 2709 23 S 243899 endosymbiont 'TC1' of Trimyema compressum + 0.00 648 3 25652 17585 P 201174 Actinobacteria + 0.00 462 14 17456 9900 C 1760 Actinomycetia + 0.00 220 0 8153 3236 O 2037 Actinomycetales + 0.00 220 0 8153 3236 F 2049 Actinomycetaceae + 0.00 177 8 3601 2814 G 1654 Actinomyces + 0.00 145 2 2784 2128 G1 2609248 unclassified Actinomyces + 0.00 136 136 2622 2003 S 712122 Actinomyces sp. oral taxon 414 + 0.00 2 2 12 9 S 2057798 Actinomyces sp. 432 + 0.00 2 2 12 10 S 2755559 Actinomyces sp. MAS-1 + 0.00 1 0 29 20 S 706438 Actinomyces sp. oral taxon 171 + 0.00 1 1 29 20 S1 706439 Actinomyces sp. oral taxon 171 str. F0337 + 0.00 1 1 11 7 S 2708340 Actinomyces sp. zg-332 + 0.00 1 1 3 3 S 2789424 Actinomyces sp. HMT897 + 0.00 5 5 30 29 S 544580 Actinomyces oris + 0.00 4 4 32 27 S 1656 Actinomyces viscosus + 0.00 3 3 16 11 S 111015 Actinomyces radicidentis + 0.00 2 2 14 14 S 2560010 Actinomyces procaprae + 0.00 2 2 13 8 S 2057800 Actinomyces qiguomingii + 0.00 2 2 14 13 S 1655 Actinomyces naeslundii + 0.00 1 1 4 3 S 2057743 Actinomyces wuliandei + 0.00 1 1 10 10 S 2722820 Actinomyces faecalis + 0.00 1 1 3 3 S 2321394 Actinomyces lilanjuaniae + 0.00 1 1 13 13 S 675090 Actinomyces weissii + 0.00 1 1 9 7 S 52774 Actinomyces slackii + 0.00 1 1 9 9 S 52771 Actinomyces howellii + 0.00 21 0 4157 85 G 28263 Arcanobacterium + 0.00 21 21 4144 76 S 28264 Arcanobacterium haemolyticum + 0.00 15 0 252 220 G 2529408 Schaalia + 0.00 10 10 161 142 S 1660 Schaalia odontolytica + 0.00 5 5 56 49 S 52773 Schaalia meyeri + 0.00 4 0 31 30 G 2740557 Pauljensenia + 0.00 4 4 31 30 S 178339 Pauljensenia hongkongensis + 0.00 1 0 21 14 G 1069494 Trueperella + 0.00 1 1 6 6 S 2733571 Trueperella pecoris + 0.00 1 0 15 11 G 2767327 Fannyhessea + 0.00 1 1 15 11 S 82135 Fannyhessea vaginae + 0.00 1 0 1 1 G 2912996 Changpingibacter + 0.00 1 1 1 1 S 2758440 Changpingibacter yushuensis + 0.00 76 1 1775 1349 O 85007 Corynebacteriales + 0.00 32 0 689 537 F 1653 Corynebacteriaceae + 0.00 32 1 689 537 G 1716 Corynebacterium + 0.00 6 6 16 5 S 2754725 Corynebacterium incognita + 0.00 4 4 21 6 S 1862358 Corynebacterium choanae + 0.00 4 0 18 6 S 1717 Corynebacterium diphtheriae + 0.00 4 0 15 3 S1 1806053 Corynebacterium diphtheriae bv. mitis + 0.00 4 4 15 3 S2 1450520 Corynebacterium diphtheriae bv. mitis str. ISS 3319 + 0.00 4 0 5 1 S 38288 Corynebacterium genitalium + 0.00 4 4 5 1 S1 585529 Corynebacterium genitalium ATCC 33030 + 0.00 3 3 135 135 S 1725 Corynebacterium xerosis + 0.00 2 2 48 24 S 1979527 Corynebacterium kefirresidentii + 0.00 2 0 118 114 S 38305 Corynebacterium vitaeruminis + 0.00 2 2 118 114 S1 1224164 Corynebacterium vitaeruminis DSM 20294 + 0.00 1 0 9 9 S 258224 Corynebacterium resistens + 0.00 1 1 9 9 S1 662755 Corynebacterium resistens DSM 45100 + 0.00 1 1 38 27 S 146827 Corynebacterium simulans + 0.00 1 1 4 3 S 156976 Corynebacterium riegelii + 0.00 1 1 24 14 S 1718 Corynebacterium glutamicum + 0.00 1 1 22 22 S 28028 Corynebacterium flavescens + 0.00 1 1 15 8 S 441500 Corynebacterium timonense + 0.00 26 0 433 311 F 1762 Mycobacteriaceae + 0.00 21 0 253 175 G 1763 Mycobacterium + 0.00 17 0 81 21 G1 77643 Mycobacterium tuberculosis complex + 0.00 17 7 77 17 S 1773 Mycobacterium tuberculosis + 0.00 6 6 16 2 S1 1765 Mycobacterium tuberculosis variant bovis + 0.00 3 3 11 4 S1 1010835 Mycobacterium tuberculosis BT2 + 0.00 1 1 6 2 S1 1806 Mycobacterium tuberculosis variant microti + 0.00 2 2 7 4 S 1780 Mycobacterium malmoense + 0.00 1 0 21 15 G1 2249310 Mycobacterium simiae complex + 0.00 1 1 2 1 S 292462 Mycobacterium florentinum + 0.00 1 1 43 43 S 1789 Mycobacterium xenopi + 0.00 5 0 139 101 G 1866885 Mycolicibacterium + 0.00 2 2 18 3 S 1795 Mycolicibacterium neoaurum + 0.00 1 0 1 1 S 1810 Mycolicibacterium vaccae + 0.00 1 1 1 1 S1 1354275 Mycolicibacterium vaccae 95051 + 0.00 1 1 1 1 S 85693 Mycolicibacterium monacense + 0.00 1 1 2 2 S 2736649 Mycolicibacterium mengxianglii + 0.00 12 0 520 418 F 85025 Nocardiaceae + 0.00 11 0 445 369 G 1827 Rhodococcus + 0.00 6 6 255 201 S 1828 Rhodococcus fascians + 0.00 3 0 33 27 G1 192944 unclassified Rhodococcus + 0.00 1 1 5 5 S 2499145 Rhodococcus sp. X156 + 0.00 1 1 4 4 S 1302308 Rhodococcus sp. P1Y + 0.00 1 1 6 3 S 1653478 Rhodococcus sp. PBTS 1 + 0.00 2 0 69 60 G1 2840174 Rhodococcus erythropolis group + 0.00 1 1 52 43 S 1833 Rhodococcus erythropolis + 0.00 1 1 17 17 S 334542 Rhodococcus qingshengii + 0.00 1 0 75 49 G 1817 Nocardia + 0.00 1 1 3 3 S 209247 Nocardia yamanashiensis + 0.00 5 0 61 33 F 85026 Gordoniaceae + 0.00 5 0 60 32 G 2053 Gordonia + 0.00 5 5 35 11 S 84595 Gordonia polyisoprenivorans + 0.00 74 0 2776 1553 O 85004 Bifidobacteriales + 0.00 74 0 2776 1553 F 31953 Bifidobacteriaceae + 0.00 72 2 2753 1537 G 1678 Bifidobacterium + 0.00 53 31 2212 1055 S 216816 Bifidobacterium longum + 0.00 15 14 59 29 S1 1682 Bifidobacterium longum subsp. infantis + 0.00 1 1 1 1 S2 565040 Bifidobacterium longum subsp. infantis 157F + 0.00 7 7 85 66 S1 1679 Bifidobacterium longum subsp. longum + 0.00 9 9 33 25 S 1685 Bifidobacterium breve + 0.00 5 0 17 5 S 28025 Bifidobacterium animalis + 0.00 5 0 14 2 S1 302911 Bifidobacterium animalis subsp. lactis + 0.00 5 5 14 2 S2 1316911 Bifidobacterium animalis subsp. lactis KLDS2.0603 + 0.00 2 2 108 107 S 1689 Bifidobacterium dentium + 0.00 1 0 9 5 S 1686 Bifidobacterium catenulatum + 0.00 1 1 7 4 S1 630129 Bifidobacterium catenulatum subsp. kashiwanohense + 0.00 2 0 15 9 G 2701 Gardnerella + 0.00 2 2 13 8 S 2702 Gardnerella vaginalis + 0.00 29 0 1427 1200 O 85009 Propionibacteriales + 0.00 27 0 1303 1089 F 31957 Propionibacteriaceae + 0.00 17 1 809 671 G 1912216 Cutibacterium + 0.00 14 14 650 529 S 1747 Cutibacterium acnes + 0.00 2 2 45 44 S 33010 Cutibacterium avidum + 0.00 7 0 366 320 G 2801844 Arachnia + 0.00 7 7 344 299 S 1750 Arachnia propionica + 0.00 3 2 70 47 G 1743 Propionibacterium + 0.00 1 1 51 37 S 556499 Propionibacterium acidifaciens + 0.00 2 0 115 103 F 85015 Nocardioidaceae + 0.00 2 0 83 74 G 1839 Nocardioides + 0.00 1 0 40 34 G1 2615069 unclassified Nocardioides + 0.00 1 1 2 2 S 2803858 Nocardioides sp. zg-536 + 0.00 1 1 4 4 S 2575440 Nocardioides jishulii + 0.00 20 0 742 552 O 85011 Streptomycetales + 0.00 20 0 742 552 F 2062 Streptomycetaceae + 0.00 19 0 661 527 G 1883 Streptomyces + 0.00 7 7 12 2 S 1437453 Streptomyces leeuwenhoekii + 0.00 4 1 210 168 G1 2593676 unclassified Streptomyces + 0.00 2 2 6 3 S 2721173 Streptomyces sp. DSM 40868 + 0.00 1 1 3 2 S 2585716 Streptomyces sp. C8S0 + 0.00 2 2 15 6 S 40318 Streptomyces nodosus + 0.00 1 1 12 11 S 47716 Streptomyces olivaceus + 0.00 1 0 9 7 G1 2839105 Streptomyces violaceusniger group + 0.00 1 1 2 1 S 155177 Streptomyces yatensis + 0.00 1 1 4 3 S 66374 Streptomyces nojiriensis + 0.00 1 1 2 2 S 2662397 Streptomyces fagopyri + 0.00 1 1 4 3 S 1927 Streptomyces rimosus + 0.00 1 0 5 5 S 285450 Streptomyces roseochromogenus + 0.00 1 0 5 5 S1 149682 Streptomyces roseochromogenus subsp. oscitans + 0.00 1 1 5 5 S2 1352936 Streptomyces roseochromogenus subsp. oscitans DS 12.976 + 0.00 1 0 13 10 G 2063 Kitasatospora + 0.00 1 1 4 2 S 68173 Kitasatospora albolonga + 0.00 18 0 959 737 O 85006 Micrococcales + 0.00 8 0 398 333 F 85023 Microbacteriaceae + 0.00 6 1 134 121 G 33882 Microbacterium + 0.00 3 2 55 51 G1 2609290 unclassified Microbacterium + 0.00 1 1 2 1 S 2268461 Microbacterium sp. ABRD_28 + 0.00 1 1 1 1 S 69362 Microbacterium schleiferi + 0.00 1 1 6 6 S 273677 Microbacterium oleivorans + 0.00 1 0 19 18 G 33877 Agromyces + 0.00 1 1 2 2 S 2585717 Agromyces laixinhei + 0.00 1 0 28 28 G 190323 Plantibacter + 0.00 1 1 3 3 S 150123 Plantibacter flavus + 0.00 3 0 34 31 F 85016 Cellulomonadaceae + 0.00 3 0 26 24 G 1707 Cellulomonas + 0.00 2 0 16 14 G1 2620175 unclassified Cellulomonas + 0.00 2 2 3 2 S 2816956 Cellulomonas sp. zg-ZUI222 + 0.00 1 1 5 5 S 76862 Cellulomonas iranensis + 0.00 2 0 247 206 F 1268 Micrococcaceae + 0.00 1 0 69 64 G 32207 Rothia + 0.00 1 1 55 53 S 37923 Rothia kristinae + 0.00 1 0 20 15 G 1742993 Pseudarthrobacter + 0.00 1 1 8 5 G1 2647000 unclassified Pseudarthrobacter + 0.00 2 0 13 11 F 1331736 Ruaniaceae + 0.00 2 0 13 11 G 626119 Ruania + 0.00 2 2 4 2 S 2675754 Haloactinobacterium kanbiaonis + 0.00 1 0 15 11 F 85017 Promicromonosporaceae + 0.00 1 0 10 6 G 157920 Cellulosimicrobium + 0.00 1 0 6 3 G1 2624466 unclassified Cellulosimicrobium + 0.00 1 1 6 3 S 2587808 Cellulosimicrobium sp. BI34T + 0.00 1 0 46 27 F 85019 Brevibacteriaceae + 0.00 1 0 46 27 G 1696 Brevibacterium + 0.00 1 0 8 6 G1 2614124 unclassified Brevibacterium + 0.00 1 1 2 2 S 2725563 Brevibacterium sp. 'Marine' + 0.00 1 0 85 22 F 85020 Dermabacteraceae + 0.00 1 1 21 17 G 43668 Brachybacterium + 0.00 4 0 189 151 O 85008 Micromonosporales + 0.00 4 0 189 151 F 28056 Micromonosporaceae + 0.00 2 2 43 34 G 1865 Actinoplanes + 0.00 1 0 10 5 G 35753 Dactylosporangium + 0.00 1 1 10 5 S 53362 Dactylosporangium vinaceum + 0.00 1 0 1 1 G 84593 Verrucosispora + 0.00 1 0 1 1 G1 2630859 unclassified Verrucosispora + 0.00 1 1 1 1 S 2742132 Verrucosispora sp. NA02020 + 0.00 3 0 211 166 O 85010 Pseudonocardiales + 0.00 3 0 211 166 F 2070 Pseudonocardiaceae + 0.00 1 1 25 21 G 1835 Saccharopolyspora + 0.00 1 0 12 4 G 2029 Kibdelosporangium + 0.00 1 1 12 4 S 860235 Kibdelosporangium phytohabitans + 0.00 1 0 6 2 G 165301 Lentzea + 0.00 1 1 6 2 S 1586287 Lentzea guizhouensis + 0.00 2 0 9 7 O 85014 Glycomycetales + 0.00 2 0 9 7 F 85034 Glycomycetaceae + 0.00 2 0 7 5 G 283810 Stackebrandtia + 0.00 2 0 7 5 S 283811 Stackebrandtia nassauensis + 0.00 2 2 7 5 S1 446470 Stackebrandtia nassauensis DSM 44728 + 0.00 1 0 113 80 O 85012 Streptosporangiales + 0.00 1 0 40 31 F 2004 Streptosporangiaceae + 0.00 1 0 8 8 G 2000 Streptosporangium + 0.00 1 0 5 5 S 2001 Streptosporangium roseum + 0.00 1 1 5 5 S1 479432 Streptosporangium roseum DSM 43021 + 0.00 1 0 15 8 O 622450 Actinopolysporales + 0.00 1 0 15 8 F 622451 Actinopolysporaceae + 0.00 1 0 15 8 G 1849 Actinopolyspora + 0.00 1 1 15 8 S 414996 Actinopolyspora erythraea + 0.00 173 1 7939 7532 C 84998 Coriobacteriia + 0.00 157 0 7480 7191 O 1643822 Eggerthellales + 0.00 157 2 7480 7191 F 1643826 Eggerthellaceae + 0.00 144 7 6863 6645 G 84111 Eggerthella + 0.00 135 134 5968 5757 S 84112 Eggerthella lenta + 0.00 1 1 11 11 S1 479437 Eggerthella lenta DSM 2243 + 0.00 2 2 44 44 S 2690837 Eggerthella guodeyinii + 0.00 5 0 17 13 G 84108 Slackia + 0.00 5 5 17 13 S 84110 Slackia heliotrinireducens + 0.00 3 1 124 119 G 644652 Gordonibacter + 0.00 2 0 122 117 S 471189 Gordonibacter pamelaeae + 0.00 2 2 122 117 S1 657308 Gordonibacter pamelaeae 7-10-1-b + 0.00 1 0 16 10 G 79603 Denitrobacterium + 0.00 1 1 16 10 S 79604 Denitrobacterium detoxificans + 0.00 1 0 9 8 G 1926677 Raoultibacter + 0.00 1 1 9 8 S 1907662 Raoultibacter timonensis + 0.00 1 0 6 5 G 2815775 Berryella + 0.00 1 1 6 5 S 1531429 Berryella intestinalis + 0.00 15 0 421 314 O 84999 Coriobacteriales + 0.00 8 0 137 116 F 1643824 Atopobiaceae + 0.00 5 0 66 63 G 133925 Olsenella + 0.00 5 0 63 60 S 133926 Olsenella uli + 0.00 5 5 63 60 S1 633147 Olsenella uli DSM 7084 + 0.00 2 0 33 30 G 2767353 Lancefieldella + 0.00 2 0 33 30 S 1382 Lancefieldella parvula + 0.00 2 2 33 30 S1 521095 Lancefieldella parvulum DSM 20469 + 0.00 1 0 2 2 G 2847312 Parafannyhessea + 0.00 1 1 2 2 S 604330 Parafannyhessea umbonata + 0.00 7 0 267 189 F 84107 Coriobacteriaceae + 0.00 7 0 263 186 G 102106 Collinsella + 0.00 7 3 251 178 S 74426 Collinsella aerofaciens + 0.00 4 4 29 23 S1 411903 Collinsella aerofaciens ATCC 25986 + 0.00 5 3 17 10 C 908620 Nitriliruptoria + 0.00 2 0 6 3 O 908621 Euzebyales + 0.00 2 0 6 3 F 908622 Euzebyaceae + 0.00 2 0 6 3 G 908623 Euzebya + 0.00 2 2 6 3 S 1608957 Euzebya pacifica + 0.00 4 0 52 21 C 84992 Acidimicrobiia + 0.00 4 0 52 21 O 84993 Acidimicrobiales + 0.00 4 4 44 14 F 633392 Iamiaceae + 0.00 1 0 36 19 C 84995 Rubrobacteria + 0.00 1 0 36 19 O 84996 Rubrobacterales + 0.00 1 0 31 15 F 84997 Rubrobacteraceae + 0.00 1 0 31 15 G 42255 Rubrobacter + 0.00 1 1 7 2 S 2653851 Rubrobacter tropicus + 0.00 394 6 7561 1136 P 544448 Tenericutes + 0.00 366 0 5224 914 C 31969 Mollicutes + 0.00 343 0 4384 442 O 2085 Mycoplasmatales + 0.00 343 0 4384 442 F 2092 Mycoplasmataceae + 0.00 285 0 2561 175 G 2093 Mycoplasma + 0.00 274 0 2331 36 G1 656088 Mycoplasma mycoides group + 0.00 250 0 756 8 S 2102 Mycoplasma mycoides + 0.00 250 250 751 6 S1 40477 Mycoplasma mycoides subsp. capri + 0.00 24 0 1566 23 S 2095 Mycoplasma capricolum + 0.00 24 23 94 21 S1 40480 Mycoplasma capricolum subsp. capripneumoniae + 0.00 1 1 13 4 S2 927701 Mycoplasma capricolum subsp. capripneumoniae M1601 + 0.00 5 0 95 55 G1 2683645 unclassified Mycoplasma + 0.00 5 5 30 14 S 2683967 Mycoplasma sp. NEAQ87857 + 0.00 3 0 3 1 S 141391 Candidatus Mycoplasma haemolamae + 0.00 3 3 3 1 S1 1212765 Candidatus Mycoplasma haemolamae str. Purdue + 0.00 1 1 7 6 S 538220 Mycoplasma struthionis + 0.00 1 1 11 5 S 2096 Mycoplasma gallisepticum + 0.00 1 1 12 4 S 353852 Mycoplasma nasistruthionis + 0.00 54 1 419 202 G 2767358 Mycoplasmopsis + 0.00 32 32 95 43 S 29553 Mycoplasmopsis bovirhinis + 0.00 19 19 106 64 S 29556 Mycoplasmopsis gallinacea + 0.00 1 1 9 7 S 2112 Mycoplasmopsis bovigenitalium + 0.00 1 1 5 4 S 29561 Mycoplasmopsis meleagridis + 0.00 3 0 19 8 G 295595 Candidatus Hepatoplasma + 0.00 3 0 19 8 S 295596 Candidatus Hepatoplasma crinochetorum + 0.00 3 3 19 8 S1 1427984 Candidatus Hepatoplasma crinochetorum Av + 0.00 1 1 19 16 G 2129 Ureaplasma + 0.00 14 0 358 176 O 186329 Acholeplasmatales + 0.00 14 2 358 176 F 2146 Acholeplasmataceae + 0.00 5 5 103 45 G 33926 Candidatus Phytoplasma + 0.00 2 2 93 36 G 2147 Acholeplasma + 0.00 2 0 36 19 G 2903105 Alteracholeplasma + 0.00 2 0 36 19 S 38986 Alteracholeplasma palmae + 0.00 2 2 36 19 S1 1318466 Alteracholeplasma palmae J233 + 0.00 2 0 62 30 G 2903106 Haploplasma + 0.00 2 2 62 30 S 29552 Haploplasma axanthum + 0.00 1 0 25 20 G 2903107 Paracholeplasma + 0.00 1 1 25 20 S 61635 Paracholeplasma brassicae + 0.00 9 1 446 276 O 186328 Entomoplasmatales + 0.00 8 0 344 215 F 2131 Spiroplasmataceae + 0.00 8 2 344 215 G 2132 Spiroplasma + 0.00 4 0 59 27 G1 2637901 unclassified Spiroplasma + 0.00 4 4 34 10 S 2792084 Spiroplasma endosymbiont of 'Nebria riversi' + 0.00 2 2 17 10 S 2139 Spiroplasma clarkii + 0.00 14 0 2178 144 O 2790996 Mycoplasmoidales + 0.00 7 0 75 28 F 2790998 Mycoplasmoidaceae + 0.00 7 0 75 28 G 2791001 Malacoplasma + 0.00 4 4 43 16 S 2116 Malacoplasma iowae + 0.00 3 0 26 10 S 28227 Malacoplasma penetrans + 0.00 3 3 26 10 S1 272633 Malacoplasma penetrans HF-2 + 0.00 7 0 2103 116 F 2895623 Metamycoplasmataceae + 0.00 7 0 2103 116 G 2895509 Metamycoplasma + 0.00 6 6 89 67 S 2098 Metamycoplasma hominis + 0.00 1 1 7 4 S 29559 Metamycoplasma hyosynoviae + 0.00 8 0 64 27 P1 2799557 Tenericutes incertae sedis + 0.00 8 0 64 27 G 1912503 Candidatus Izimaplasma + 0.00 8 0 64 27 G1 2624196 unclassified Candidatus Izimaplasma + 0.00 8 8 64 27 S 1541959 Candidatus Izimaplasma sp. HR1 + 0.00 67 0 4473 978 D2 1798711 Cyanobacteria/Melainabacteria group + 0.00 67 15 4473 978 P 1117 Cyanobacteria + 0.00 14 0 582 396 O 1161 Nostocales + 0.00 6 0 237 168 F 1162 Nostocaceae + 0.00 6 0 169 123 G 1177 Nostoc + 0.00 3 0 117 81 G1 2593658 unclassified Nostoc + 0.00 1 1 4 4 S 2814655 Nostoc sp. UHCC 0702 + 0.00 1 1 8 4 S 2576904 Nostoc sp. TCL26-01 + 0.00 1 1 4 3 S 2572090 Nostoc sp. TCL240-02 + 0.00 2 0 13 10 S 446679 Nostoc sphaeroides + 0.00 2 2 6 4 S1 2653204 Nostoc sphaeroides CCNUC1 + 0.00 1 0 10 9 S 264686 Nostoc edaphicum + 0.00 1 1 10 9 S1 1472755 Nostoc edaphicum CCNP1411 + 0.00 6 0 155 97 F 2661849 Calotrichaceae + 0.00 6 0 155 97 G 1186 Calothrix + 0.00 6 1 128 76 G1 2619626 unclassified Calothrix + 0.00 5 5 28 8 S 1170562 Calothrix sp. PCC 6303 + 0.00 2 0 77 47 F 1892259 Aphanizomenonaceae + 0.00 1 0 9 7 G 159191 Nodularia + 0.00 1 1 8 6 S 70799 Nodularia spumigena + 0.00 1 0 23 14 G 752201 Sphaerospermopsis + 0.00 1 0 14 9 S 289435 Sphaerospermopsis kisseleviana + 0.00 1 1 14 9 S1 1973480 Sphaerospermopsis kisseleviana NIES-73 + 0.00 12 0 2142 187 P1 1301283 Oscillatoriophycideae + 0.00 8 1 1344 81 O 1150 Oscillatoriales + 0.00 5 0 59 28 F 1892254 Oscillatoriaceae + 0.00 5 0 34 16 G 1158 Oscillatoria + 0.00 5 0 29 13 S 118323 Oscillatoria acuminata + 0.00 5 5 29 13 S1 56110 Oscillatoria acuminata PCC 6304 + 0.00 2 0 1237 23 F 1892252 Microcoleaceae + 0.00 2 1 10 7 G 54304 Planktothrix + 0.00 1 0 5 2 S 1160 Planktothrix agardhii + 0.00 1 1 5 2 S1 388467 Planktothrix agardhii NIVA-CYA 126/8 + 0.00 4 1 798 106 O 1118 Chroococcales + 0.00 2 0 24 16 F 1890449 Microcystaceae + 0.00 2 1 24 16 G 1125 Microcystis + 0.00 1 0 3 3 G1 2643300 unclassified Microcystis + 0.00 1 1 3 3 S 1967666 Microcystis sp. MC19 + 0.00 1 0 66 43 F 1890450 Aphanothecaceae + 0.00 1 0 18 7 F1 92682 Halothece cluster + 0.00 1 0 10 5 G 76023 Halothece + 0.00 1 0 10 5 G1 2632878 unclassified Halothece + 0.00 1 1 10 5 S 65093 Halothece sp. PCC 7418 + 0.00 9 0 101 72 O 2881377 Pseudanabaenales + 0.00 8 0 71 46 F 1890438 Leptolyngbyaceae + 0.00 8 0 49 29 G 47251 Leptolyngbya + 0.00 8 0 37 18 G1 2650499 unclassified Leptolyngbya + 0.00 7 7 27 9 S 2812896 Leptolyngbya sp. 7M + 0.00 1 1 4 4 S 1752064 Leptolyngbya sp. NIES-3755 + 0.00 1 0 11 8 F 2881378 Thermosynechococcaceae + 0.00 1 0 11 8 G 146785 Thermosynechococcus + 0.00 1 0 5 4 G1 2622553 unclassified Thermosynechococcus + 0.00 1 1 1 1 S 1394889 Thermosynechococcus sp. NK55a + 0.00 8 0 1359 198 O 1890424 Synechococcales + 0.00 7 0 152 102 F 1890426 Synechococcaceae + 0.00 7 0 144 95 G 1129 Synechococcus + 0.00 7 0 130 85 G1 2626047 unclassified Synechococcus + 0.00 6 6 24 5 S 321332 Synechococcus sp. JA-2-3B'a(2-13) + 0.00 1 1 9 7 S 195250 Synechococcus sp. PCC 7336 + 0.00 1 0 1153 55 F 2881426 Prochlorococcaceae + 0.00 1 1 1149 51 G 1218 Prochlorococcus + 0.00 6 0 19 9 P1 1983111 unclassified Cyanobacteria + 0.00 6 6 12 7 S 1763363 cyanobacterium endosymbiont of Rhopalodia gibberula + 0.00 2 0 31 13 C 307596 Gloeobacteria + 0.00 2 0 31 13 O 307595 Gloeobacterales + 0.00 2 2 31 13 F 1890422 Gloeobacteraceae + 0.00 1 0 8 3 O 1955042 Gloeomargaritales + 0.00 1 0 8 3 F 1955043 Gloeomargaritaceae + 0.00 1 0 8 3 G 1188227 Gloeomargarita + 0.00 1 0 8 3 S 1188228 Gloeomargarita lithophora + 0.00 1 1 8 3 S1 1188229 Gloeomargarita lithophora Alchichica-D10 + 0.00 26 3 267 110 P 200795 Chloroflexi + 0.00 6 0 43 16 C 32061 Chloroflexia + 0.00 6 0 43 16 O 32064 Chloroflexales + 0.00 6 0 18 5 O1 1508594 Chloroflexineae + 0.00 6 0 18 5 F 1106 Chloroflexaceae + 0.00 6 6 18 5 G 1107 Chloroflexus + 0.00 6 0 33 14 C 292625 Anaerolineae + 0.00 6 0 33 14 O 292629 Anaerolineales + 0.00 6 0 33 14 F 292628 Anaerolineaceae + 0.00 4 0 9 2 G 233189 Anaerolinea + 0.00 4 0 9 2 S 167964 Anaerolinea thermophila + 0.00 4 4 9 2 S1 926569 Anaerolinea thermophila UNI-1 + 0.00 1 0 18 6 G 1649478 Pelolinea + 0.00 1 1 18 6 S 913107 Pelolinea submarina + 0.00 1 0 6 6 G 2019482 Brevefilum + 0.00 1 1 6 6 S 1986204 Brevefilum fermentans + 0.00 4 1 29 18 C 301297 Dehalococcoidia + 0.00 3 0 18 12 O 1202465 Dehalococcoidales + 0.00 3 0 18 12 F 1202464 Dehalococcoidaceae + 0.00 3 3 18 12 G 61434 Dehalococcoides + 0.00 2 0 39 15 C 189775 Thermomicrobia + 0.00 2 0 27 10 C1 85000 Sphaerobacteridae + 0.00 2 0 27 10 O 85001 Sphaerobacterales + 0.00 2 0 27 10 O1 255728 Sphaerobacterineae + 0.00 2 0 27 10 F 85002 Sphaerobacteraceae + 0.00 2 0 27 10 G 2056 Sphaerobacter + 0.00 2 0 27 10 S 2057 Sphaerobacter thermophilus + 0.00 2 2 27 10 S1 479434 Sphaerobacter thermophilus DSM 20745 + 0.00 2 0 14 8 C 388447 Ktedonobacteria + 0.00 2 0 14 8 O 388448 Ktedonobacterales + 0.00 2 0 14 8 F 2692416 Ktedonosporobacteraceae + 0.00 2 0 14 8 G 2692417 Ktedonosporobacter + 0.00 2 2 14 8 S 2509675 Ktedonosporobacter rubrisoli + 0.00 1 0 11 5 C 1382928 Ardenticatenia + 0.00 1 0 11 5 O 1382929 Ardenticatenales + 0.00 1 0 11 5 F 1382930 Ardenticatenaceae + 0.00 1 0 11 5 G 1988031 Candidatus Promineofilum + 0.00 1 1 11 5 S 1806508 Candidatus Promineofilum breve + 0.00 1 0 23 11 C 2364196 Candidatus Thermofonsia + 0.00 1 0 23 11 O 2364208 Phototrophicales + 0.00 1 0 23 11 F 2922432 Phototrophicaceae + 0.00 1 0 23 11 G 2922426 Phototrophicus + 0.00 1 1 23 11 S 2710758 Phototrophicus methaneseepsis + 0.00 1 0 18 7 C 2682225 Tepidiformia + 0.00 1 0 18 7 O 2682226 Tepidiformales + 0.00 1 0 18 7 F 2682227 Tepidiformaceae + 0.00 1 0 18 7 G 2682228 Tepidiforma + 0.00 1 1 18 7 S 2601677 Tepidiforma bonchosmolovskayae + 0.00 11 0 177 109 P 1297 Deinococcus-Thermus + 0.00 11 2 177 109 C 188787 Deinococci + 0.00 5 0 79 48 O 68933 Thermales + 0.00 5 0 79 48 F 188786 Thermaceae + 0.00 4 0 54 34 G 270 Thermus + 0.00 3 3 34 18 S 56956 Thermus brockianus + 0.00 1 0 4 2 S 271 Thermus aquaticus + 0.00 1 1 4 2 S1 498848 Thermus aquaticus Y51MC23 + 0.00 1 0 24 13 G 65551 Meiothermus + 0.00 1 0 9 8 S 52022 Meiothermus silvanus + 0.00 1 1 9 8 S1 526227 Meiothermus silvanus DSM 9946 + 0.00 4 0 92 57 O 118964 Deinococcales + 0.00 4 0 92 57 F 183710 Deinococcaceae + 0.00 4 1 92 57 G 1298 Deinococcus + 0.00 1 0 22 11 G1 2623546 unclassified Deinococcus + 0.00 1 1 4 4 S 2080419 Deinococcus sp. NW-56 + 0.00 1 1 11 6 S 68909 Deinococcus geothermalis + 0.00 1 0 6 5 S 432329 Deinococcus peraridilitoris + 0.00 1 1 6 5 S1 937777 Deinococcus peraridilitoris DSM 19664 + 0.00 8 0 52 15 P 67819 Armatimonadetes + 0.00 7 0 43 11 C 1663419 Fimbriimonadia + 0.00 7 0 43 11 O 1663425 Fimbriimonadales + 0.00 7 0 43 11 F 1663426 Fimbriimonadaceae + 0.00 7 0 43 11 G 1005038 Fimbriimonas + 0.00 7 0 43 11 S 1005039 Fimbriimonas ginsengisoli + 0.00 7 7 43 11 S1 661478 Fimbriimonas ginsengisoli Gsoil 348 + 0.00 1 0 9 4 C 1077257 Chthonomonadetes + 0.00 1 0 9 4 O 1077263 Chthonomonadales + 0.00 1 0 9 4 F 1077264 Chthonomonadaceae + 0.00 1 0 9 4 G 1077265 Chthonomonas + 0.00 1 0 9 4 S 454171 Chthonomonas calidirosea + 0.00 1 1 9 4 S1 1303518 Chthonomonas calidirosea T49 + 5.77 1558650 2829 85087329 1972585 P 1224 Proteobacteria + 5.76 1555094 35713 83824377 1941037 C 1236 Gammaproteobacteria + 5.63 1519117 85579 78580364 1833561 O 91347 Enterobacterales + 5.30 1430266 79446 69988213 1682745 F 543 Enterobacteriaceae + 4.98 1343672 8651 58017787 1384629 F1 2890311 Klebsiella/Raoultella group + 4.94 1334575 860058 56280007 1352172 G 570 Klebsiella + 1.71 460831 455518 4019512 140340 S 573 Klebsiella pneumoniae + 0.02 4694 1963 12134 1829 S1 72407 Klebsiella pneumoniae subsp. pneumoniae + 0.01 2526 2526 6221 191 S2 1193292 Klebsiella pneumoniae subsp. pneumoniae 1084 + 0.00 136 136 340 87 S2 1328324 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 + 0.00 32 32 51 24 S2 272620 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 + 0.00 10 10 23 21 S2 1123862 Klebsiella pneumoniae subsp. pneumoniae Kp13 + 0.00 8 8 8 1 S2 1094170 Klebsiella pneumoniae subsp. pneumoniae KPNIH10 + 0.00 4 4 4 4 S2 484021 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 + 0.00 4 4 5 5 S2 1392499 Klebsiella pneumoniae subsp. pneumoniae 1158 + 0.00 3 3 3 3 S2 1087440 Klebsiella pneumoniae subsp. pneumoniae KPNIH1 + 0.00 3 3 3 2 S2 1125630 Klebsiella pneumoniae subsp. pneumoniae HS11286 + 0.00 3 3 3 3 S2 1308539 Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 + 0.00 1 1 10 10 S2 1225181 Klebsiella pneumoniae subsp. pneumoniae KPNIH24 + 0.00 1 1 2 1 S2 1406314 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 + 0.00 470 2 1315 676 S1 39831 Klebsiella pneumoniae subsp. rhinoscleromatis + 0.00 468 468 1312 673 S2 861365 Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 + 0.00 66 66 114 37 S1 1328373 Klebsiella pneumoniae MGH 39 + 0.00 39 39 100 6 S1 1304922 Klebsiella pneumoniae 500_1420 + 0.00 11 11 12 9 S1 574 Klebsiella pneumoniae subsp. ozaenae + 0.00 7 7 12 12 S1 1365186 Klebsiella pneumoniae KP-1 + 0.00 6 6 15 15 S1 1049565 Klebsiella pneumoniae KCTC 2242 + 0.00 6 6 10 10 S1 1420012 Klebsiella pneumoniae 30660/NJST258_1 + 0.00 5 5 14 13 S1 1244085 Klebsiella pneumoniae CG43 + 0.00 3 3 5 4 S1 1392500 Klebsiella pneumoniae HK787 + 0.00 3 3 11 11 S1 1420013 Klebsiella pneumoniae 30684/NJST258_2 + 0.00 2 2 2 2 S1 1284798 Klebsiella pneumoniae DMC1097 + 0.00 1 1 4 4 S1 1284804 Klebsiella pneumoniae UHKPC07 + 0.02 4116 3938 14724 7388 S 1463165 Klebsiella quasipneumoniae + 0.00 128 128 485 270 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae + 0.00 50 50 147 99 S1 1463164 Klebsiella quasipneumoniae subsp. similipneumoniae + 0.02 4115 3725 12648 4926 S 244366 Klebsiella variicola + 0.00 232 232 782 550 S1 2489014 Klebsiella variicola subsp. tropica + 0.00 89 89 485 204 S1 2590157 Klebsiella variicola subsp. variicola + 0.00 69 69 140 85 S1 640131 Klebsiella variicola At-22 + 0.00 1304 1304 4673 1834 S 2026240 Klebsiella quasivariicola + 0.00 959 959 3508 2211 S 2489010 Klebsiella africana + 0.00 940 176 5437 550 G1 2608929 unclassified Klebsiella + 0.00 547 547 4085 32 S 2675713 Klebsiella sp. WP4-W18-ESBL-05 + 0.00 46 46 283 17 S 2851540 Klebsiella sp. PL-2018 + 0.00 45 45 261 23 S 2873296 Klebsiella sp. CTHL.F3a + 0.00 43 43 102 38 S 2834819 Klebsiella sp. A52 + 0.00 30 30 94 27 S 2897413 Klebsiella sp. KPN54798 + 0.00 21 21 108 84 S 2267618 Klebsiella sp. P1CD1 + 0.00 7 7 36 5 S 2488567 Klebsiella sp. FDAARGOS_511 + 0.00 7 7 11 11 S 2787706 Klebsiella sp. BDA134-6 + 0.00 6 6 14 13 S 2697371 Klebsiella sp. MPUS7 + 0.00 3 3 4 4 S 2675710 Klebsiella sp. WP3-W18-ESBL-02 + 0.00 3 3 4 4 S 1905288 Klebsiella sp. LTGPAF-6F + 0.00 2 2 2 2 S 2015795 Klebsiella sp. LY + 0.00 1 1 1 1 S 2675711 Klebsiella sp. WP3-S18-ESBL-05 + 0.00 1 1 8 6 S 2829836 Klebsiella sp. P1927 + 0.00 1 1 8 8 S 2686364 Klebsiella sp. PCX + 0.00 1 1 1 1 S 2742649 Klebsiella sp. RHBSTW-00464 + 0.00 815 813 2339 1003 S 548 Klebsiella aerogenes + 0.00 2 2 2 2 S1 935296 Klebsiella aerogenes EA1509E + 0.00 547 429 1483 556 S 1134687 Klebsiella michiganensis + 0.00 80 80 95 1 S1 1191061 Klebsiella michiganensis E718 + 0.00 23 23 115 6 S1 1006551 Klebsiella michiganensis KCTC 1686 + 0.00 15 15 99 8 S1 1308980 Klebsiella michiganensis HKOPL1 + 0.00 519 519 1296 672 S 571 Klebsiella oxytoca + 0.00 241 241 1267 183 S 2058152 Klebsiella grimontii + 0.00 124 124 252 145 S 2153354 Klebsiella huaxiensis + 0.00 6 6 12 12 S 2587529 Klebsiella pasteurii + 0.00 446 52 5291 1522 G 160674 Raoultella + 0.00 316 316 1667 237 S 54291 Raoultella ornithinolytica + 0.00 56 56 389 206 S 575 Raoultella planticola + 0.00 15 0 335 110 G1 2627600 unclassified Raoultella + 0.00 10 10 74 4 S 2799495 Raoultella sp. XY-1 + 0.00 4 4 255 100 S 2923366 Raoultella sp. HC6 + 0.00 1 1 6 6 S 2259647 Raoultella sp. X13 + 0.00 7 7 121 84 S 577 Raoultella terrigena + 0.01 3496 1267 11757 3698 G 561 Escherichia + 0.01 2179 2050 9610 3236 S 562 Escherichia coli + 0.00 87 87 239 16 S1 941322 Escherichia coli O25b:H4-ST131 + 0.00 6 6 20 18 S1 83334 Escherichia coli O157:H7 + 0.00 5 5 8 2 S1 866768 Escherichia coli 'BL21-Gold(DE3)pLysS AG' + 0.00 3 3 14 8 S1 2603836 Escherichia coli O10:H32 + 0.00 3 3 5 4 S1 930406 Escherichia coli O157:H16 + 0.00 2 1 7 6 S1 83333 Escherichia coli K-12 + 0.00 1 1 2 2 S2 879462 Escherichia coli str. K-12 substr. MG1655star + 0.00 2 0 3 3 S1 1038927 Escherichia coli O104:H4 + 0.00 2 2 2 2 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 + 0.00 2 2 3 2 S1 1078032 Escherichia coli O45:H2 + 0.00 2 2 7 7 S1 316435 Escherichia coli Nissle 1917 + 0.00 2 2 10 10 S1 2848145 Escherichia coli O170:H18 + 0.00 2 2 7 6 S1 2027293 Escherichia coli O8:H8 + 0.00 1 1 4 4 S1 585055 Escherichia coli 55989 + 0.00 1 1 2 2 S1 866789 Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 + 0.00 1 1 2 2 S1 1446746 Escherichia coli O6:H16 + 0.00 1 1 1 1 S1 696406 Escherichia coli UMNK88 + 0.00 1 1 1 1 S1 2773707 Escherichia coli O19:H7 + 0.00 1 1 1 1 S1 2048781 Escherichia coli O27:H7 + 0.00 1 1 4 4 S1 2778657 Escherichia coli O9:H10 + 0.00 1 1 8 8 S1 376725 Escherichia coli O103:H2 + 0.00 1 1 10 6 S1 1322345 Escherichia coli ATCC 25922 + 0.00 1 1 8 8 S1 1358422 Escherichia coli PCN061 + 0.00 1 1 3 3 S1 1055538 Escherichia coli O145 + 0.00 1 0 3 3 S1 1072458 Escherichia coli O7:K1 + 0.00 1 1 3 3 S2 1072459 Escherichia coli O7:K1 str. CE10 + 0.00 1 1 1 1 S1 1329907 Escherichia coli APEC IMT5155 + 0.00 17 17 184 133 S 564 Escherichia fergusonii + 0.00 17 17 93 54 S 1499973 Escherichia marmotae + 0.00 13 13 197 95 S 208962 Escherichia albertii + 0.00 3 0 23 22 G1 2608889 unclassified Escherichia + 0.00 2 2 21 21 S 2044467 Escherichia sp. E4742 + 0.00 1 1 2 1 S 1884818 Escherichia sp. + 0.01 2141 47 10857 4439 G 547 Enterobacter + 0.00 1139 68 6435 2362 G1 354276 Enterobacter cloacae complex + 0.00 291 0 1894 131 G2 2757714 unclassified Enterobacter cloacae complex + 0.00 232 232 592 8 S 2912629 Enterobacter cloacae complex sp. ECL411 + 0.00 51 51 1252 74 S 2027919 Enterobacter cloacae complex sp. + 0.00 4 4 23 23 S 2912628 Enterobacter cloacae complex sp. ECL414 + 0.00 1 1 2 2 S 2912630 Enterobacter cloacae complex sp. ECL405 + 0.00 1 1 3 3 S 2876028 Enterobacter cloacae complex sp. ECL352 + 0.00 1 1 4 4 S 1915310 Enterobacter cloacae complex sp. ECNIH7 + 0.00 1 1 1 1 S 2798729 Enterobacter cloacae complex sp. AR_0002 + 0.00 267 253 1539 452 S 158836 Enterobacter hormaechei + 0.00 8 8 19 16 S1 299766 Enterobacter hormaechei subsp. steigerwaltii + 0.00 5 5 28 27 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis + 0.00 1 1 1 1 S1 301105 Enterobacter hormaechei subsp. hormaechei + 0.00 224 220 893 548 S 550 Enterobacter cloacae + 0.00 3 3 82 20 S1 336306 Enterobacter cloacae subsp. cloacae + 0.00 1 1 3 2 S1 1333850 Enterobacter cloacae ECNIH2 + 0.00 201 201 556 161 S 1812935 Enterobacter roggenkampii + 0.00 38 38 241 182 S 61645 Enterobacter asburiae + 0.00 25 25 143 124 S 208224 Enterobacter kobei + 0.00 11 11 175 94 S 299767 Enterobacter ludwigii + 0.00 10 10 227 133 S 69218 Enterobacter cancerogenus + 0.00 2 2 21 18 S 2071710 Enterobacter sichuanensis + 0.00 2 2 49 43 S 2494701 Enterobacter chengduensis + 0.00 662 1 1833 736 G1 2608935 unclassified Enterobacter + 0.00 609 609 834 42 S 2831891 Enterobacter sp. JBIWA005 + 0.00 14 14 55 41 S 2720029 Enterobacter sp. DNB-S2 + 0.00 8 8 384 243 S 2724468 Enterobacter sp. JUb54 + 0.00 7 7 78 45 S 2831892 Enterobacter sp. JBIWA008 + 0.00 5 5 113 111 S 1914861 Enterobacter sp. SA187 + 0.00 4 4 39 38 S 2596949 Enterobacter sp. E76 + 0.00 3 3 50 11 S 2565914 Enterobacter sp. 18A13 + 0.00 2 2 12 12 S 2866201 Enterobacter sp. Colony194 + 0.00 2 2 19 15 S 2705458 Enterobacter sp. SES19 + 0.00 1 1 13 11 S 2831890 Enterobacter sp. JBIWA003 + 0.00 1 1 1 1 S 2742656 Enterobacter sp. RHBSTW-00593 + 0.00 1 1 77 53 S 2742676 Enterobacter sp. RHBSTW-00994 + 0.00 1 1 38 33 S 2742639 Enterobacter sp. RHBSTW-00175 + 0.00 1 1 6 6 S 2500132 Enterobacter sp. N18-03635 + 0.00 1 1 4 4 S 1827481 Enterobacter sp. ODB01 + 0.00 1 1 1 1 S 1632810 Enterobacter sp. 247 + 0.00 277 277 712 62 S 539813 Enterobacter mori + 0.00 6 6 125 86 S 2478464 Enterobacter oligotrophicus + 0.00 6 6 60 52 S 2494702 Enterobacter huaxiensis + 0.00 2 2 69 54 S 881260 Enterobacter bugandensis + 0.00 2 2 40 32 S 885040 Enterobacter soli + 0.00 419 5 2804 1228 G 590 Salmonella + 0.00 368 204 1873 1001 S 28901 Salmonella enterica + 0.00 146 17 839 543 S1 59201 Salmonella enterica subsp. enterica + 0.00 28 28 132 75 S2 28144 Salmonella enterica subsp. enterica serovar Derby + 0.00 12 11 35 22 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium + 0.00 1 1 1 1 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 + 0.00 9 9 91 31 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- + 0.00 8 8 16 16 S2 2564349 Salmonella enterica subsp. enterica serovar Dessau + 0.00 7 7 7 5 S2 486999 Salmonella enterica subsp. enterica serovar Meleagridis + 0.00 5 0 47 15 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg + 0.00 5 5 45 13 S3 1124936 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 + 0.00 5 3 61 57 S2 119912 Salmonella enterica subsp. enterica serovar Choleraesuis + 0.00 2 2 3 3 S3 321314 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 + 0.00 5 5 31 23 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis + 0.00 4 1 19 17 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly + 0.00 3 3 17 15 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 + 0.00 4 4 12 12 S2 28150 Salmonella enterica subsp. enterica serovar Senftenberg + 0.00 4 4 11 8 S2 1962641 Salmonella enterica subsp. enterica serovar Birkenhead + 0.00 3 2 24 9 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul + 0.00 1 1 4 4 S3 702982 Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26 + 0.00 3 2 22 17 S2 58712 Salmonella enterica subsp. enterica serovar Anatum + 0.00 1 1 1 1 S3 984211 Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 + 0.00 3 3 12 11 S2 90370 Salmonella enterica subsp. enterica serovar Typhi + 0.00 3 1 18 11 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo + 0.00 2 2 9 5 S3 763921 Salmonella enterica subsp. enterica serovar Montevideo str. 42N + 0.00 3 3 15 11 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- + 0.00 2 2 3 3 S2 2021403 Salmonella enterica subsp. enterica serovar Adjame + 0.00 2 2 4 3 S2 46626 Salmonella enterica subsp. enterica serovar Give + 0.00 2 2 9 9 S2 1160769 Salmonella enterica subsp. enterica serovar Worthington + 0.00 2 2 12 4 S2 149391 Salmonella enterica subsp. enterica serovar Braenderup + 0.00 1 1 1 1 S2 149390 Salmonella enterica subsp. enterica serovar London + 0.00 1 1 2 2 S2 149385 Salmonella enterica subsp. enterica serovar Hadar + 0.00 1 0 8 8 S2 1242079 Salmonella enterica subsp. enterica serovar Apapa + 0.00 1 1 8 8 S3 1242088 Salmonella enterica subsp. enterica serovar Apapa str. SA20060561 + 0.00 1 1 5 5 S2 1151001 Salmonella enterica subsp. enterica serovar Napoli + 0.00 1 1 1 1 S2 189201 Salmonella enterica subsp. enterica serovar Cubana + 0.00 1 0 3 2 S2 1242082 Salmonella enterica subsp. enterica serovar India + 0.00 1 1 3 2 S3 1242098 Salmonella enterica subsp. enterica serovar India str. SA20085604 + 0.00 1 1 1 1 S2 192953 Salmonella enterica subsp. enterica serovar Stanley + 0.00 1 1 3 3 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky + 0.00 1 0 8 8 S2 260368 Salmonella enterica subsp. enterica serovar Bergen + 0.00 1 1 8 8 S3 1240708 Salmonella enterica subsp. enterica serovar Bergen str. ST350 + 0.00 1 0 3 3 S2 436295 Salmonella enterica subsp. enterica serovar Poona + 0.00 1 1 3 3 S3 1124962 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 + 0.00 1 0 8 8 S2 1242085 Salmonella enterica subsp. enterica serovar Macclesfield + 0.00 1 1 8 8 S3 1242107 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 + 0.00 1 0 1 1 S2 1243583 Salmonella enterica subsp. enterica serovar Onderstepoort + 0.00 1 1 1 1 S3 1243584 Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 + 0.00 1 1 3 3 S2 28147 Salmonella enterica subsp. enterica serovar Oranienburg + 0.00 1 0 2 2 S2 598 Salmonella enterica subsp. enterica serovar Rubislaw + 0.00 1 1 2 2 S3 938143 Salmonella enterica subsp. enterica serovar Rubislaw str. ATCC 10717 + 0.00 1 0 2 2 S2 57045 Salmonella enterica subsp. enterica serovar Paratyphi B + 0.00 1 1 2 2 S3 224729 Salmonella enterica subsp. enterica serovar Java + 0.00 11 5 105 65 S1 59202 Salmonella enterica subsp. salamae + 0.00 5 0 73 39 S2 1243601 Salmonella enterica subsp. salamae serovar 55:k:z39 + 0.00 5 5 73 39 S3 1243602 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K + 0.00 1 1 6 6 S2 2577858 Salmonella enterica subsp. salamae serovar 56:b:[1,5] + 0.00 3 0 19 19 S1 59204 Salmonella enterica subsp. diarizonae + 0.00 2 2 16 16 S2 1192842 Salmonella enterica subsp. diarizonae serovar 48:i:z + 0.00 1 0 1 1 S2 1243611 Salmonella enterica subsp. diarizonae serovar 50:k:z + 0.00 1 1 1 1 S3 1243612 Salmonella enterica subsp. diarizonae serovar 50:k:z str. MZ0080 + 0.00 2 0 10 10 S1 59205 Salmonella enterica subsp. houtenae + 0.00 1 1 7 7 S2 523831 Salmonella enterica subsp. houtenae str. ATCC BAA-1581 + 0.00 1 1 3 3 S2 2729104 Salmonella enterica subsp. houtenae serovar 43:z4 + 0.00 1 1 18 15 S1 59203 Salmonella enterica subsp. arizonae + 0.00 1 1 2 2 S1 59207 Salmonella enterica subsp. indica + 0.00 43 0 688 4 G1 2614656 unclassified Salmonella + 0.00 43 43 685 3 S 599 Salmonella sp. + 0.00 3 2 82 73 S 54736 Salmonella bongori + 0.00 1 1 6 3 S1 1299282 Salmonella bongori CFSAN000510 + 0.00 384 67 4151 2194 G 544 Citrobacter + 0.00 201 12 1750 669 G1 1344959 Citrobacter freundii complex + 0.00 137 136 447 309 S 546 Citrobacter freundii + 0.00 1 1 9 4 S1 1006003 Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681 + 0.00 33 33 860 57 S 1639133 Citrobacter portucalensis + 0.00 7 7 111 54 S 57706 Citrobacter braakii + 0.00 6 6 58 54 S 67827 Citrobacter werkmanii + 0.00 5 0 66 31 G2 2816438 unclassified Citrobacter freundii complex + 0.00 2 2 9 8 S 2066049 Citrobacter freundii complex sp. CFNIH2 + 0.00 2 2 5 4 S 2077147 Citrobacter freundii complex sp. CFNIH3 + 0.00 1 1 41 8 S 2077149 Citrobacter freundii complex sp. CFNIH9 + 0.00 1 1 10 10 S 133448 Citrobacter youngae + 0.00 66 66 163 30 S 2546350 Citrobacter arsenatis + 0.00 21 6 465 282 G1 2644389 unclassified Citrobacter + 0.00 6 6 159 89 S 1573676 Citrobacter sp. R56 + 0.00 2 2 17 16 S 2781952 Citrobacter sp. BDA59-3 + 0.00 2 2 6 3 S 2742671 Citrobacter sp. RHBSTW-00944 + 0.00 1 1 115 61 S 2742624 Citrobacter sp. RHB25-C09 + 0.00 1 1 14 14 S 2742678 Citrobacter sp. RHBSTW-01044 + 0.00 1 1 10 10 S 2742675 Citrobacter sp. RHBSTW-00986 + 0.00 1 1 9 9 S 2566012 Citrobacter sp. CF971 + 0.00 1 1 5 5 S 2742655 Citrobacter sp. RHBSTW-00570 + 0.00 14 10 78 69 S 35703 Citrobacter amalonaticus + 0.00 4 4 49 43 S1 1261127 Citrobacter amalonaticus Y19 + 0.00 5 5 98 86 S 67824 Citrobacter farmeri + 0.00 5 5 87 46 S 1563222 Citrobacter pasteurii + 0.00 3 3 48 44 S 545 Citrobacter koseri + 0.00 2 2 51 48 S 2562449 Citrobacter tructae + 0.00 261 8 1207 801 G 83654 Leclercia + 0.00 176 176 393 220 S 83655 Leclercia adecarboxylata + 0.00 76 0 429 258 G1 2627398 unclassified Leclercia + 0.00 62 62 156 33 S 2681307 Leclercia sp. J807 + 0.00 4 4 32 25 S 2282309 Leclercia sp. W17 + 0.00 3 3 3 2 S 1920116 Leclercia sp. LSNIH3 + 0.00 3 3 50 47 S 2714951 Leclercia sp. 29361 + 0.00 2 2 6 6 S 2681308 Leclercia sp. 119287 + 0.00 1 1 14 14 S 2282310 Leclercia sp. W6 + 0.00 1 1 13 13 S 2898725 Leclercia sp. G3L + 0.00 1 1 115 82 S 2815358 Leclercia pneumoniae + 0.00 169 7 1113 311 G 620 Shigella + 0.00 84 82 251 59 S 621 Shigella boydii + 0.00 2 2 8 6 S1 344609 Shigella boydii CDC 3083-94 + 0.00 64 56 736 151 S 623 Shigella flexneri + 0.00 3 0 5 5 S1 42897 Shigella flexneri 2a + 0.00 2 2 3 3 S2 198214 Shigella flexneri 2a str. 301 + 0.00 1 1 2 2 S2 198215 Shigella flexneri 2a str. 2457T + 0.00 2 2 11 10 S1 424717 Shigella flexneri 3a + 0.00 1 1 1 1 S1 374923 Shigella flexneri 1a + 0.00 1 1 6 5 S1 591020 Shigella flexneri 2002017 + 0.00 1 1 1 1 S1 1282357 Shigella flexneri 2003036 + 0.00 12 9 69 57 S 622 Shigella dysenteriae + 0.00 2 2 6 6 S1 300267 Shigella dysenteriae Sd197 + 0.00 1 1 3 3 S1 984897 Shigella dysenteriae 1 + 0.00 2 2 30 25 S 624 Shigella sonnei + 0.00 63 4 787 475 G 413496 Cronobacter + 0.00 35 8 281 110 S 28141 Cronobacter sakazakii + 0.00 27 27 135 3 S1 956149 Cronobacter sakazakii SP291 + 0.00 13 0 68 29 S 535744 Cronobacter universalis + 0.00 13 13 68 29 S1 1074000 Cronobacter universalis NCTC 9529 + 0.00 5 5 38 36 S 413503 Cronobacter malonaticus + 0.00 5 0 61 58 S 1163710 Cronobacter condimenti + 0.00 5 5 61 58 S1 1073999 Cronobacter condimenti 1330 + 0.00 1 0 71 64 S 413497 Cronobacter dublinensis + 0.00 1 0 71 64 S1 413498 Cronobacter dublinensis subsp. dublinensis + 0.00 1 1 71 64 S2 1159554 Cronobacter dublinensis subsp. dublinensis LMG 23823 + 0.00 53 18 1133 700 G 1330547 Kosakonia + 0.00 16 12 135 54 S 283686 Kosakonia radicincitans + 0.00 4 4 9 9 S1 1177180 Kosakonia radicincitans DSM 16656 + 0.00 6 6 127 118 S 208223 Kosakonia cowanii + 0.00 5 0 147 113 G1 2632876 unclassified Kosakonia + 0.00 4 4 72 45 S 2725560 Kosakonia sp. SMBL-WEM22 + 0.00 1 1 37 32 S 2067958 Kosakonia sp. MUSA4 + 0.00 3 3 150 34 S 497725 Kosakonia oryzae + 0.00 3 3 52 46 S 551989 Kosakonia arachidis + 0.00 1 1 126 93 S 1158459 Kosakonia sacchari + 0.00 1 1 89 43 S 1646340 Kosakonia pseudosacchari + 0.00 38 0 295 140 G 158876 Yokenella + 0.00 38 38 295 140 S 158877 Yokenella regensburgei + 0.00 29 0 195 72 G 2815296 Jejubacter + 0.00 29 29 195 72 S 2579935 Jejubacter calystegiae + 0.00 17 0 556 367 G 1330546 Pluralibacter + 0.00 10 10 227 180 S 61647 Pluralibacter gergoviae + 0.00 7 4 327 185 S 1334193 [Enterobacter] lignolyticus + 0.00 3 3 30 26 S1 701347 [Enterobacter] lignolyticus SCF1 + 0.00 15 0 367 273 G 1330545 Lelliottia + 0.00 14 14 257 201 S 61646 Lelliottia amnigena + 0.00 1 0 70 67 G1 2642424 unclassified Lelliottia + 0.00 1 1 70 67 S 2153385 Lelliottia sp. WB101 + 0.00 12 1 635 311 G 579 Kluyvera + 0.00 4 4 106 96 S 51288 Kluyvera ascorbata + 0.00 4 0 25 23 G1 2619995 unclassified Kluyvera + 0.00 4 4 25 23 S 2873269 Kluyvera sp. CRP + 0.00 3 3 222 85 S 61648 Kluyvera intermedia + 0.00 10 0 135 106 F1 191675 Enterobacteriaceae incertae sedis + 0.00 10 0 135 106 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts + 0.00 3 0 5 3 G 1682492 Candidatus Tachikawaea + 0.00 3 3 5 3 S 1410383 Candidatus Tachikawaea gelatinosa + 0.00 2 0 28 24 F3 146507 aphid secondary symbionts + 0.00 2 0 20 16 G 568987 Candidatus Hamiltonella + 0.00 2 2 20 16 S 138072 Candidatus Hamiltonella defensa + 0.00 2 0 12 7 G 472825 Candidatus Purcelliella + 0.00 2 2 12 7 S 472834 Candidatus Purcelliella pentastirinorum + 0.00 2 0 6 6 G 1906657 Candidatus Doolittlea + 0.00 2 2 6 6 S 1778262 Candidatus Doolittlea endobia + 0.00 1 0 36 33 G 801 Candidatus Symbiopectobacterium + 0.00 1 0 36 33 G1 2794573 unclassified Candidatus Symbiopectobacterium + 0.00 1 1 36 33 S 2871826 Candidatus Symbiopectobacterium sp. SyEd1 + 0.00 8 0 489 320 G 158483 Cedecea + 0.00 5 5 225 169 S 158822 Cedecea neteri + 0.00 2 0 84 77 G1 2649846 unclassified Cedecea + 0.00 2 2 84 77 S 2545798 Cedecea sp. FDAARGOS_727 + 0.00 1 1 106 44 S 158823 Cedecea lapagei + 0.00 6 0 115 95 G 1335483 Shimwellia + 0.00 6 6 115 95 S 563 Shimwellia blattae + 0.00 6 0 109 73 G 447792 Phytobacter + 0.00 3 3 89 57 S 1972431 Phytobacter ursingii + 0.00 2 0 6 6 G1 2625049 unclassified Phytobacter + 0.00 2 2 6 6 S 1756993 Phytobacter sp. SCO41 + 0.00 1 1 12 8 S 395631 Phytobacter diazotrophicus + 0.00 5 2 95 87 G 82976 Buttiauxella + 0.00 3 0 10 8 G1 2634062 unclassified Buttiauxella + 0.00 3 3 10 8 S 2479367 Buttiauxella sp. 3AFRM03 + 0.00 4 0 29 28 G 702 Plesiomonas + 0.00 4 4 29 28 S 703 Plesiomonas shigelloides + 0.00 3 0 121 103 G 1504576 Pseudocitrobacter + 0.00 3 0 121 103 G1 2638778 unclassified Pseudocitrobacter + 0.00 3 3 121 103 S 2891570 Pseudocitrobacter sp. G163CM + 0.00 3 0 156 116 G 2055880 Pseudescherichia + 0.00 3 3 156 116 S 566 Pseudescherichia vulneris + 0.00 3 0 137 106 G 2726810 Scandinavium + 0.00 3 3 137 106 S 1851514 Scandinavium goeteborgense + 0.00 2 1 1232 31 F1 36866 unclassified Enterobacteriaceae + 0.00 1 1 2 2 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa + 0.00 1 0 7 7 G 1081630 Candidatus Schneideria + 0.00 1 1 7 7 S 1081631 Candidatus Schneideria nysicola + 0.01 1595 0 5833 845 F 1903410 Pectobacteriaceae + 0.01 1569 5 5056 292 G 122277 Pectobacterium + 0.01 1547 1547 4740 15 S 2204145 Pectobacterium aquaticum + 0.00 5 5 26 19 S 78398 Pectobacterium odoriferum + 0.00 3 3 20 20 S 2488639 Pectobacterium versatile + 0.00 3 0 24 20 G1 2627739 unclassified Pectobacterium + 0.00 2 2 3 2 S 2738983 Pectobacterium sp. PL64 + 0.00 1 1 21 18 S 2878098 Pectobacterium sp. LJ1 + 0.00 2 1 25 24 S 554 Pectobacterium carotovorum + 0.00 1 1 14 14 S1 555 Pectobacterium carotovorum subsp. carotovorum + 0.00 2 2 23 20 S 1905730 Pectobacterium parmentieri + 0.00 1 0 15 14 S 29471 Pectobacterium atrosepticum + 0.00 1 1 3 3 S1 218491 Pectobacterium atrosepticum SCRI1043 + 0.00 1 1 18 16 S 180957 Pectobacterium brasiliense + 0.00 17 6 392 331 G 204037 Dickeya + 0.00 5 5 26 25 S 204039 Dickeya dianthicola + 0.00 2 2 43 41 S 204042 Dickeya zeae + 0.00 2 2 25 23 S 1089444 Dickeya solani + 0.00 1 0 43 39 S 556 Dickeya chrysanthemi + 0.00 1 1 6 5 S1 1223571 Dickeya chrysanthemi NCPPB 516 + 0.00 1 1 40 38 S 204038 Dickeya dadantii + 0.00 6 0 256 115 G 71655 Brenneria + 0.00 3 3 25 20 S 55213 Brenneria rubrifaciens + 0.00 3 3 32 29 S 2722756 Brenneria izadpanahii + 0.00 3 0 52 45 G 1082702 Lonsdalea + 0.00 2 2 33 26 S 1082704 Lonsdalea britannica + 0.00 1 1 16 16 S 1172565 Lonsdalea populi + 0.00 1104 2 5372 2055 F 1903411 Yersiniaceae + 0.00 807 10 3369 1197 G 613 Serratia + 0.00 723 723 1687 52 S 47917 Serratia fonticola + 0.00 42 41 310 214 S 615 Serratia marcescens + 0.00 1 1 2 2 S1 1401254 Serratia marcescens SMB2099 + 0.00 12 0 143 108 G1 2647522 unclassified Serratia + 0.00 3 3 8 3 S 2785630 Serratia sp. CMO1 + 0.00 2 2 17 9 S 2831895 Serratia sp. JSRIV004 + 0.00 2 2 11 7 S 2420306 Serratia sp. FDAARGOS_506 + 0.00 2 2 10 8 S 2485839 Serratia sp. LS-1 + 0.00 1 1 5 3 S 2831894 Serratia sp. JSRIV002 + 0.00 1 1 10 8 S 2447890 Serratia sp. 1D1416 + 0.00 1 1 12 11 S 2448483 Serratia sp. 3ACOL1 + 0.00 11 11 63 58 S 138074 Serratia symbiotica + 0.00 4 4 38 33 S 614 Serratia liquefaciens + 0.00 2 2 35 32 S 61652 Serratia rubidaea + 0.00 1 1 111 39 S 618 Serratia odorifera + 0.00 1 1 45 35 S 42906 Serratia entomophila + 0.00 1 1 8 8 S 2597702 Serratia rhizosphaerae + 0.00 273 1 1182 378 G 629 Yersinia + 0.00 246 246 695 40 S 29486 Yersinia ruckeri + 0.00 9 0 59 53 G1 1649845 Yersinia pseudotuberculosis complex + 0.00 8 5 30 28 S 632 Yersinia pestis + 0.00 1 1 1 1 S1 1345702 Yersinia pestis 2944 + 0.00 1 1 3 3 S1 1345701 Yersinia pestis 790 + 0.00 1 1 3 1 S1 748678 Yersinia pestis str. Pestoides B + 0.00 1 0 10 9 S 633 Yersinia pseudotuberculosis + 0.00 1 1 1 1 S1 273123 Yersinia pseudotuberculosis IP 32953 + 0.00 4 4 60 56 S 630 Yersinia enterocolitica + 0.00 4 4 25 22 S 29484 Yersinia frederiksenii + 0.00 2 2 13 7 S 28152 Yersinia kristensenii + 0.00 2 2 17 16 S 2339259 Yersinia hibernica + 0.00 2 2 8 7 S 1604335 Yersinia rochesterensis + 0.00 1 1 7 7 S 631 Yersinia intermedia + 0.00 1 0 6 6 S 29483 Yersinia aldovae + 0.00 1 1 6 6 S1 1453495 Yersinia aldovae 670-83 + 0.00 1 1 11 10 S 2607663 Yersinia canariae + 0.00 15 1 336 212 G 34037 Rahnella + 0.00 7 7 148 62 S 58169 Rahnella inusitata + 0.00 3 0 31 28 G1 2635087 unclassified Rahnella + 0.00 2 2 2 1 S 360016 Rahnella sp. 'WMR15' + 0.00 1 1 29 27 S 1805933 Rahnella sp. ERMR1:05 + 0.00 2 2 57 47 S 34038 Rahnella aquatilis + 0.00 1 1 27 25 S 1510570 Rahnella victoriana + 0.00 1 1 10 10 S 2703885 Rahnella aceris + 0.00 3 0 119 49 G 1964366 Nissabacter + 0.00 3 0 119 49 G1 2636213 unclassified Nissabacter + 0.00 3 3 119 49 S 2126321 Nissabacter sp. SGAir0207 + 0.00 2 0 30 28 G 41201 Ewingella + 0.00 2 2 30 28 S 41202 Ewingella americana + 0.00 1 0 32 30 G 1565532 Rouxiella + 0.00 1 1 32 30 S 1646377 Rouxiella badensis + 0.00 1 0 12 11 G 1927833 Candidatus Fukatsuia + 0.00 1 1 12 11 S 1878942 Candidatus Fukatsuia symbiotica + 0.00 441 4 4497 1989 F 1903409 Erwiniaceae + 0.00 392 5 2322 1103 G 53335 Pantoea + 0.00 333 0 892 38 S 66269 Pantoea stewartii + 0.00 333 0 866 16 S1 66271 Pantoea stewartii subsp. stewartii + 0.00 333 333 866 16 S2 660596 Pantoea stewartii subsp. stewartii DC283 + 0.00 15 0 276 231 G1 2630326 unclassified Pantoea + 0.00 9 9 87 59 S 592316 Pantoea sp. At-9b + 0.00 2 2 66 58 S 2490851 Pantoea sp. CCBC3-3-1 + 0.00 2 2 42 39 S 2886821 Pantoea sp. Z09 + 0.00 1 1 35 34 S 2052056 Pantoea sp. MSR2 + 0.00 1 1 31 26 S 2575375 Pantoea sp. SO10 + 0.00 14 0 262 206 G1 1654067 Pantoea agglomerans group + 0.00 14 14 262 206 S 549 Pantoea agglomerans + 0.00 11 11 212 146 S 59814 Pantoea dispersa + 0.00 7 6 97 86 S 553 Pantoea ananatis + 0.00 1 1 12 10 S1 1095774 Pantoea ananatis PA13 + 0.00 4 4 79 74 S 470934 Pantoea vagans + 0.00 2 2 39 32 S 1891675 Pantoea alhagi + 0.00 1 1 45 37 S 470932 Pantoea deleyi + 0.00 34 3 1689 505 G 551 Erwinia + 0.00 8 0 128 109 G1 2622719 unclassified Erwinia + 0.00 3 3 9 9 S 215689 Erwinia sp. Ejp617 + 0.00 2 2 11 7 S 2547962 Erwinia sp. QL-Z3 + 0.00 2 2 62 59 S 2675378 Erwinia sp. E602 + 0.00 1 1 45 33 S 2681984 Erwinia sp. J780 + 0.00 6 1 57 31 S 552 Erwinia amylovora + 0.00 5 5 13 11 S1 889211 Erwinia amylovora ATCC BAA-2158 + 0.00 4 4 34 30 S 65700 Erwinia tracheiphila + 0.00 3 3 60 54 S 55212 Erwinia rhapontici + 0.00 2 2 72 64 S 55211 Erwinia persicina + 0.00 2 0 27 22 S 182337 Erwinia billingiae + 0.00 2 2 14 11 S1 634500 Erwinia billingiae Eb661 + 0.00 2 0 33 30 S 338565 Erwinia tasmaniensis + 0.00 2 2 33 30 S1 465817 Erwinia tasmaniensis Et1/99 + 0.00 2 2 38 31 S 1619313 Erwinia gerundensis + 0.00 1 1 5 5 S 79967 Erwinia pyrifoliae + 0.00 1 1 1133 37 S 1922217 Candidatus Erwinia haradaeae + 0.00 5 0 208 158 G 2100764 Mixta + 0.00 2 2 46 42 S 665913 Mixta calida + 0.00 2 2 36 31 S 1615494 Mixta intestinalis + 0.00 1 1 76 45 S 665914 Mixta gaviniae + 0.00 4 0 44 39 G 82986 Tatumella + 0.00 2 2 26 21 S 53336 Tatumella citrea + 0.00 2 2 17 17 S 82987 Tatumella ptyseos + 0.00 2 0 115 81 G 32199 Buchnera + 0.00 2 1 115 81 S 9 Buchnera aphidicola + 0.00 1 1 2 2 S1 98785 Buchnera aphidicola (Aphis gossypii) + 0.00 91 0 2499 621 F 1903414 Morganellaceae + 0.00 30 1 1619 119 G 583 Proteus + 0.00 19 19 66 28 S 584 Proteus mirabilis + 0.00 7 7 120 22 S 585 Proteus vulgaris + 0.00 1 0 1351 5 G1 257482 unclassified Proteus + 0.00 1 1 1348 2 S 2883107 Proteus sp. NMG38-2 + 0.00 1 0 11 11 S 1574161 Proteus terrae + 0.00 1 1 11 11 S1 626774 Proteus terrae subsp. cibarius + 0.00 1 1 1 1 S 1987580 Proteus columbae + 0.00 20 0 240 43 G 637 Arsenophonus + 0.00 14 0 174 17 G1 2627083 unclassified Arsenophonus + 0.00 14 14 99 10 S 1231049 Arsenophonus endosymbiont of Aphis craccivora + 0.00 4 4 57 19 S 638 Arsenophonus nasoniae + 0.00 2 2 5 3 S 634113 Candidatus Arsenophonus lipoptenae + 0.00 15 2 235 186 G 586 Providencia + 0.00 6 6 61 56 S 587 Providencia rettgeri + 0.00 3 3 17 13 S 158850 Providencia rustigianii + 0.00 2 0 13 12 S 516075 Providencia sneebia + 0.00 2 2 13 12 S1 1141660 Providencia sneebia DSM 19967 + 0.00 1 1 31 22 S 126385 Providencia alcalifaciens + 0.00 1 0 10 9 G1 2633465 unclassified Providencia + 0.00 1 1 10 9 S 2828763 Providencia sp. R33 + 0.00 11 0 157 106 G 581 Morganella + 0.00 11 9 157 106 S 582 Morganella morganii + 0.00 2 2 17 9 S1 180434 Morganella morganii subsp. morganii + 0.00 10 0 156 90 G 626 Xenorhabdus + 0.00 3 3 18 17 S 628 Xenorhabdus nematophila + 0.00 3 3 12 11 S 290110 Xenorhabdus budapestensis + 0.00 2 2 20 15 S 40576 Xenorhabdus bovienii + 0.00 1 0 7 7 S 40577 Xenorhabdus poinarii + 0.00 1 1 7 7 S1 1354304 Xenorhabdus poinarii G6 + 0.00 1 1 22 14 S 351671 Xenorhabdus doucetiae + 0.00 3 0 63 50 G 29487 Photorhabdus + 0.00 3 3 21 17 S 230089 Photorhabdus thracensis + 0.00 2 0 20 18 G 158848 Moellerella + 0.00 2 2 20 18 S 158849 Moellerella wisconsensis + 0.00 29 0 399 281 F 1903412 Hafniaceae + 0.00 19 5 283 183 G 635 Edwardsiella + 0.00 10 3 90 50 S 636 Edwardsiella tarda + 0.00 7 7 25 20 S1 667121 Edwardsiella tarda ATCC 15947 = NBRC 105688 + 0.00 2 2 27 24 S 1263550 Edwardsiella piscicida + 0.00 1 1 21 20 S 67780 Edwardsiella ictaluri + 0.00 1 1 13 13 S 93378 Edwardsiella hoshinae + 0.00 10 1 90 75 G 568 Hafnia + 0.00 7 7 38 30 S 546367 Hafnia paralvei + 0.00 2 2 41 35 S 569 Hafnia alvei + 0.00 11 0 206 97 F 2812006 Bruguierivoracaceae + 0.00 11 1 206 97 G 84565 Sodalis + 0.00 6 0 46 33 G1 2636512 unclassified Sodalis + 0.00 5 5 44 31 S 2697027 Sodalis sp. dw_23 + 0.00 1 1 2 2 S 1929246 Sodalis endosymbiont of Henestaris halophilus + 0.00 2 2 21 16 S 1239307 Sodalis praecaptivus + 0.00 2 0 31 11 S 1486991 Candidatus Sodalis pierantonius + 0.00 2 2 31 11 S1 2342 Candidatus Sodalis pierantonius str. SOPE + 0.00 1 0 85 76 F 1903416 Budviciaceae + 0.00 1 0 26 23 G 82980 Leminorella + 0.00 1 1 26 23 S 158841 Leminorella richardii + 0.00 47 0 4069 1556 O 72274 Pseudomonadales + 0.00 42 0 3991 1494 F 135621 Pseudomonadaceae + 0.00 39 8 3166 1429 G 286 Pseudomonas + 0.00 8 0 307 244 G1 196821 unclassified Pseudomonas + 0.00 2 2 11 3 S 2762896 Pseudomonas sp. MPDS + 0.00 2 2 6 5 S 2883205 Pseudomonas sp. L5B5 + 0.00 1 1 5 5 S 69328 Pseudomonas sp. VLB120 + 0.00 1 1 6 5 S 2748080 Pseudomonas sp. ABC1 + 0.00 1 1 3 3 S 1573711 Pseudomonas sp. R76 + 0.00 1 1 3 2 S 2653853 Pseudomonas sp. SCB32 + 0.00 6 0 1328 104 G1 136843 Pseudomonas fluorescens group + 0.00 3 3 10 8 S 29442 Pseudomonas tolaasii + 0.00 3 3 12 10 S 76758 Pseudomonas orientalis + 0.00 5 0 112 99 G1 136841 Pseudomonas aeruginosa group + 0.00 4 4 56 51 S 287 Pseudomonas aeruginosa + 0.00 1 0 17 14 G2 1232139 Pseudomonas oleovorans/pseudoalcaligenes group + 0.00 1 0 5 5 S 301 Pseudomonas oleovorans + 0.00 1 1 5 5 S1 1182590 Pseudomonas pseudoalcaligenes CECT 5344 + 0.00 5 0 127 76 G1 136846 Pseudomonas stutzeri group + 0.00 5 0 114 65 G2 578833 Pseudomonas stutzeri subgroup + 0.00 5 2 110 61 S 316 Pseudomonas stutzeri + 0.00 2 2 23 11 S1 1123519 Pseudomonas stutzeri DSM 10701 + 0.00 1 1 2 2 S1 1196835 Pseudomonas stutzeri CCUG 29243 + 0.00 3 0 41 29 G1 136842 Pseudomonas chlororaphis group + 0.00 3 2 33 21 S 587753 Pseudomonas chlororaphis + 0.00 1 1 3 1 S1 333 Pseudomonas chlororaphis subsp. chlororaphis + 0.00 3 0 106 76 G1 136845 Pseudomonas putida group + 0.00 3 3 78 52 S 303 Pseudomonas putida + 0.00 1 1 2 2 S 47884 Pseudomonas taetrolens + 0.00 2 0 15 9 G 1654787 Thiopseudomonas + 0.00 2 2 15 9 S 1697053 Thiopseudomonas alkaliphila + 0.00 1 0 17 16 G 2901189 Halopseudomonas + 0.00 1 1 4 4 S 1434072 Halopseudomonas salegens + 0.00 5 0 70 59 F 2887365 Marinobacteraceae + 0.00 5 0 70 59 G 2742 Marinobacter + 0.00 3 3 8 4 S 1420917 Marinobacter salarius + 0.00 1 1 8 8 S 2743 Marinobacter nauticus + 0.00 1 1 6 6 S 2603215 Marinobacter fonticola + 0.00 43 0 4755 798 O 135623 Vibrionales + 0.00 43 1 4755 798 F 641 Vibrionaceae + 0.00 29 0 3475 650 G 662 Vibrio + 0.00 13 12 61 22 S 666 Vibrio cholerae + 0.00 1 1 16 3 S1 579112 Vibrio cholerae M66-2 + 0.00 8 0 174 118 G1 717610 Vibrio harveyi group + 0.00 4 4 36 21 S 663 Vibrio alginolyticus + 0.00 4 4 51 39 S 670 Vibrio parahaemolyticus + 0.00 2 2 28 9 S 990268 Vibrio maritimus + 0.00 2 2 1338 18 S 190893 Vibrio coralliilyticus + 0.00 1 0 1194 47 G1 2614977 unclassified Vibrio + 0.00 1 1 6 6 S 2587865 Vibrio sp. THAF190c + 0.00 1 1 81 20 G1 1891919 Vibrio oreintalis group + 0.00 1 1 16 11 S 1381081 Vibrio panuliri + 0.00 1 1 14 11 S 47951 Vibrio cyclitrophicus + 0.00 11 0 138 67 G 657 Photobacterium + 0.00 11 0 66 23 S 38293 Photobacterium damselae + 0.00 8 8 46 8 S1 38294 Photobacterium damselae subsp. piscicida + 0.00 3 3 11 8 S1 85581 Photobacterium damselae subsp. damselae + 0.00 1 0 1065 20 G 511678 Aliivibrio + 0.00 1 0 11 10 S 668 Aliivibrio fischeri + 0.00 1 1 6 6 S1 388396 Aliivibrio fischeri MJ11 + 0.00 1 0 15 9 G 2014233 Thaumasiovibrio + 0.00 1 1 15 9 S 1891207 Thaumasiovibrio subtropicus + 0.00 39 0 664 518 O 135625 Pasteurellales + 0.00 39 0 664 518 F 712 Pasteurellaceae + 0.00 12 0 21 9 G 155493 Gallibacterium + 0.00 12 0 21 9 S 750 Gallibacterium anatis + 0.00 12 12 21 9 S1 1005058 Gallibacterium anatis UMN179 + 0.00 8 0 120 90 G 745 Pasteurella + 0.00 8 6 47 27 S 747 Pasteurella multocida + 0.00 2 1 27 14 S1 44283 Pasteurella multocida subsp. multocida + 0.00 1 1 5 1 S2 1455592 Pasteurella multocida subsp. multocida PMTB2.1 + 0.00 6 0 155 122 G 724 Haemophilus + 0.00 4 4 48 35 S 729 Haemophilus parainfluenzae + 0.00 1 1 30 19 S 727 Haemophilus influenzae + 0.00 1 1 31 29 S 730 [Haemophilus] ducreyi + 0.00 5 0 43 34 G 713 Actinobacillus + 0.00 4 4 8 5 S 715 Actinobacillus pleuropneumoniae + 0.00 1 0 10 8 G1 2644856 unclassified Actinobacillus + 0.00 1 1 10 8 S 2774188 Actinobacillus sp. GY-402 + 0.00 3 0 20 18 G 2094023 Glaesserella + 0.00 3 3 15 13 S 738 Glaesserella parasuis + 0.00 2 0 69 63 G 214906 Histophilus + 0.00 2 2 69 63 S 731 Histophilus somni + 0.00 1 0 13 12 G 109471 Bisgaardia + 0.00 1 1 13 12 S 109472 Bisgaardia hudsonensis + 0.00 1 0 32 24 G 416916 Aggregatibacter + 0.00 1 0 4 4 G1 2639383 unclassified Aggregatibacter + 0.00 1 1 2 2 S 2820817 Aggregatibacter sp. 2125159857 + 0.00 1 0 60 47 G 75984 Mannheimia + 0.00 1 1 11 8 S 75985 Mannheimia haemolytica + 0.00 27 0 2622 640 O 2887326 Moraxellales + 0.00 27 0 2622 640 F 468 Moraxellaceae + 0.00 27 3 2463 527 G 469 Acinetobacter + 0.00 21 2 1974 196 G1 909768 Acinetobacter calcoaceticus/baumannii complex + 0.00 17 15 1390 121 S 470 Acinetobacter baumannii + 0.00 2 2 16 7 S1 1279013 Acinetobacter baumannii PR07 + 0.00 2 2 29 18 S 48296 Acinetobacter pittii + 0.00 1 1 26 18 S 40214 Acinetobacter johnsonii + 0.00 1 1 17 9 S 40215 Acinetobacter junii + 0.00 1 0 105 77 G1 196816 unclassified Acinetobacter + 0.00 1 1 13 6 S 1808001 Acinetobacter sp. LoGeW2-3 + 0.00 27 0 591 426 O 135624 Aeromonadales + 0.00 27 0 571 413 F 84642 Aeromonadaceae + 0.00 27 13 504 362 G 642 Aeromonas + 0.00 4 4 55 48 S 644 Aeromonas hydrophila + 0.00 4 4 19 18 S 648 Aeromonas caviae + 0.00 2 1 34 25 S 645 Aeromonas salmonicida + 0.00 1 1 1 1 S1 197700 Aeromonas salmonicida subsp. masoucida + 0.00 2 2 18 18 S 651 Aeromonas media + 0.00 1 1 77 54 S 654 Aeromonas veronii + 0.00 1 0 33 30 G1 257493 unclassified Aeromonas + 0.00 1 1 6 6 S 2778058 Aeromonas sp. FDAARGOS 1409 + 0.00 18 3 3581 830 O 135622 Alteromonadales + 0.00 9 0 2756 190 F 267888 Pseudoalteromonadaceae + 0.00 9 6 2733 170 G 53246 Pseudoalteromonas + 0.00 2 0 56 27 G1 194690 unclassified Pseudoalteromonas + 0.00 1 1 11 3 S 649161 Pseudoalteromonas sp. 3J6 + 0.00 1 1 2 2 S 2490635 Pseudoalteromonas sp. Xi13 + 0.00 1 1 12 10 S 298657 Pseudoalteromonas spongiae + 0.00 5 0 375 297 F 267890 Shewanellaceae + 0.00 5 0 361 285 G 22 Shewanella + 0.00 2 1 81 61 G1 196818 unclassified Shewanella + 0.00 1 1 1 1 S 2864204 Shewanella sp. FJAT-53555 + 0.00 1 1 15 13 S 38313 Shewanella algae + 0.00 1 0 9 8 S 70864 Shewanella pealeana + 0.00 1 1 9 8 S1 398579 Shewanella pealeana ATCC 700345 + 0.00 1 1 9 9 S 256839 Shewanella decolorationis + 0.00 1 0 236 175 F 72275 Alteromonadaceae + 0.00 1 0 10 6 G 1172191 Catenovulum + 0.00 1 1 10 6 S 1740262 Catenovulum sediminis + 0.00 16 0 585 526 O 135614 Xanthomonadales + 0.00 15 0 504 462 F 32033 Xanthomonadaceae + 0.00 5 1 98 84 G 40323 Stenotrophomonas + 0.00 4 0 41 39 G1 995085 Stenotrophomonas maltophilia group + 0.00 4 4 33 31 S 40324 Stenotrophomonas maltophilia + 0.00 4 0 233 224 G 338 Xanthomonas + 0.00 3 3 120 120 S 339 Xanthomonas campestris + 0.00 1 1 3 3 S 56458 Xanthomonas sacchari + 0.00 4 0 29 24 G 83614 Luteimonas + 0.00 4 0 22 19 G1 2629088 unclassified Luteimonas + 0.00 3 3 7 5 S 2799326 Luteimonas sp. MC1750 + 0.00 1 1 3 3 S 1896164 Luteimonas sp. JM171 + 0.00 1 0 57 48 G 68 Lysobacter + 0.00 1 0 10 10 G1 2635362 unclassified Lysobacter + 0.00 1 1 1 1 S 2822368 Lysobacter sp. CECT 30171 + 0.00 1 0 15 14 G 141948 Thermomonas + 0.00 1 1 4 4 S 1463158 Thermomonas carbonis + 0.00 1 0 59 46 F 1775411 Rhodanobacteraceae + 0.00 1 0 2 2 G 323413 Dokdonella + 0.00 1 0 2 2 S 323415 Dokdonella koreensis + 0.00 1 1 2 2 S1 1300342 Dokdonella koreensis DS-123 + 0.00 11 0 479 357 O 135619 Oceanospirillales + 0.00 4 0 199 165 F 28256 Halomonadaceae + 0.00 4 0 146 119 G 2745 Halomonas + 0.00 3 0 76 61 G1 2609666 unclassified Halomonas + 0.00 2 2 17 9 S 2306583 Halomonas sp. JS92-SW72 + 0.00 1 1 1 1 S 1610576 Halomonas sp. R57-5 + 0.00 1 1 4 3 S 2733488 Halomonas sulfidivorans + 0.00 4 0 193 131 F 135620 Oceanospirillaceae + 0.00 3 1 104 62 G 28253 Marinomonas + 0.00 1 1 14 7 S 178399 Marinomonas primoryensis + 0.00 1 1 20 8 S 2773454 Marinomonas algicola + 0.00 1 0 22 14 G 75687 Neptunomonas + 0.00 1 1 3 3 S 1031538 Neptunomonas concharum + 0.00 2 0 25 18 F 224372 Alcanivoracaceae + 0.00 2 1 21 15 G 59753 Alcanivorax + 0.00 1 0 6 2 S 1306787 Alcanivorax pacificus + 0.00 1 1 6 2 S1 391936 Alcanivorax pacificus W11-5 + 0.00 1 0 7 6 F 2066474 Endozoicomonadaceae + 0.00 1 0 7 6 G 305899 Endozoicomonas + 0.00 1 0 7 6 S 1027273 Endozoicomonas montiporae + 0.00 1 1 7 6 S1 570277 Endozoicomonas montiporae CL-33 + 0.00 8 0 321 199 O 72273 Thiotrichales + 0.00 7 2 129 84 F 135616 Piscirickettsiaceae + 0.00 2 0 30 21 G 2039723 Thiomicrorhabdus + 0.00 1 1 7 3 S 2211106 Thiomicrorhabdus aquaedulcis + 0.00 1 1 9 6 S 2580412 Thiomicrorhabdus sediminis + 0.00 1 0 25 16 G 1237 Piscirickettsia + 0.00 1 1 25 16 S 1238 Piscirickettsia salmonis + 0.00 1 0 22 15 G 40222 Methylophaga + 0.00 1 0 7 4 G1 2629249 unclassified Methylophaga + 0.00 1 1 7 4 S 2881053 Methylophaga sp. TMB1265 + 0.00 1 0 3 3 G 2781120 Thiosulfativibrio + 0.00 1 1 3 3 S 2675053 Thiosulfativibrio zosterae + 0.00 1 0 172 98 F 34064 Francisellaceae + 0.00 1 0 164 92 G 262 Francisella + 0.00 1 0 37 14 S 263 Francisella tularensis + 0.00 1 0 19 5 S1 119857 Francisella tularensis subsp. holarctica + 0.00 1 1 19 5 S2 393011 Francisella tularensis subsp. holarctica OSU18 + 0.00 7 0 118 86 O 135618 Methylococcales + 0.00 7 0 118 86 F 403 Methylococcaceae + 0.00 3 2 41 30 G 416 Methylomonas + 0.00 1 1 2 2 S 2608981 Methylomonas rhizoryzae + 0.00 2 1 27 21 G 413 Methylococcus + 0.00 1 0 7 7 G1 2618889 unclassified Methylococcus + 0.00 1 1 3 3 S 2860258 Methylococcus sp. Mc7 + 0.00 1 0 5 5 G 73778 Methylocaldum + 0.00 1 1 5 5 S 1432792 Methylocaldum marinum + 0.00 1 0 5 4 G 762296 Methylovulum + 0.00 1 1 5 4 S 1704499 Methylovulum psychrotolerans + 0.00 6 0 217 146 O 135613 Chromatiales + 0.00 3 0 104 63 F 1046 Chromatiaceae + 0.00 1 0 7 5 G 85072 Allochromatium + 0.00 1 1 3 2 S 553982 Allochromatium tepidum + 0.00 1 0 34 7 G 85073 Thermochromatium + 0.00 1 0 34 7 S 1050 Thermochromatium tepidum + 0.00 1 1 34 7 S1 316276 Thermochromatium tepidum ATCC 43061 + 0.00 1 0 10 7 G 2828366 Caldichromatium + 0.00 1 1 10 7 S 2699430 Caldichromatium japonicum + 0.00 3 0 73 53 F 72276 Ectothiorhodospiraceae + 0.00 1 0 7 6 G 85108 Halorhodospira + 0.00 1 0 6 5 S 1053 Halorhodospira halophila + 0.00 1 1 6 5 S1 349124 Halorhodospira halophila SL1 + 0.00 1 1 33 19 G 106633 Thioalkalivibrio + 0.00 1 0 7 5 G 1765964 Acidihalobacter + 0.00 1 1 3 2 S 2792603 Acidihalobacter aeolianus + 0.00 4 0 261 181 O 118969 Legionellales + 0.00 4 0 216 153 F 444 Legionellaceae + 0.00 4 1 205 143 G 445 Legionella + 0.00 3 3 9 5 S 45067 Legionella lansingensis + 0.00 3 0 1293 79 O 1240482 Orbales + 0.00 3 0 1293 79 F 1240483 Orbaceae + 0.00 3 0 15 11 G 2894762 Zophobihabitans + 0.00 3 3 15 11 S 1635327 Zophobihabitans entericus + 0.00 2 0 93 69 C1 118884 Gammaproteobacteria incertae sedis + 0.00 1 0 7 7 G 349742 Sedimenticola + 0.00 1 1 7 7 S 1543721 Sedimenticola thiotaurini + 0.00 1 0 4 3 G 2738850 Candidatus Reidiella + 0.00 1 1 4 3 S 2738883 Candidatus Reidiella endopervernicosa + 0.00 2 0 17 12 O 1692040 Acidiferrobacterales + 0.00 2 1 17 12 F 1692041 Acidiferrobacteraceae + 0.00 1 0 5 3 G 1744881 Sulfuricaulis + 0.00 1 1 5 3 S 1620215 Sulfuricaulis limicola + 0.00 2 0 238 140 O 1706369 Cellvibrionales + 0.00 1 0 23 19 F 1706372 Halieaceae + 0.00 1 0 5 5 G 1217416 Halioglobus + 0.00 1 1 1 1 S 2601894 Halioglobus maricola + 0.00 1 0 53 46 F 1706373 Microbulbiferaceae + 0.00 1 0 53 46 G 48073 Microbulbifer + 0.00 1 0 24 21 G1 2619833 unclassified Microbulbifer + 0.00 1 1 8 6 S 1516059 Microbulbifer sp. ALW1 + 0.00 1 0 17 16 O 135615 Cardiobacteriales + 0.00 1 0 17 16 F 868 Cardiobacteriaceae + 0.00 1 0 4 4 G 13275 Suttonella + 0.00 1 0 4 4 G1 2908647 unclassified Suttonella + 0.00 1 1 4 4 S 2908648 Suttonella sp. R2A3 + 0.00 1 0 27 15 O 2887327 Kangiellales + 0.00 1 0 27 15 F 1920240 Kangiellaceae + 0.00 1 0 27 15 G 261963 Kangiella + 0.00 1 1 8 6 S 1561924 Kangiella profundi + 0.00 518 0 7463 1320 P1 68525 delta/epsilon subdivisions + 0.00 502 0 6785 897 C 29547 Epsilonproteobacteria + 0.00 502 0 6698 838 O 213849 Campylobacterales + 0.00 480 0 4339 373 F 72294 Campylobacteraceae + 0.00 480 8 4339 373 G 194 Campylobacter + 0.00 398 397 1443 21 S 195 Campylobacter coli + 0.00 1 1 4 4 S1 1183380 Campylobacter coli RM5611 + 0.00 58 55 167 80 S 197 Campylobacter jejuni + 0.00 3 3 5 3 S1 32022 Campylobacter jejuni subsp. jejuni + 0.00 10 0 1354 37 G1 2593542 unclassified Campylobacter + 0.00 10 10 1299 2 S 1032242 Campylobacter sp. RM10537 + 0.00 3 3 51 41 S 199 Campylobacter concisus + 0.00 1 1 10 10 S 204 Campylobacter showae + 0.00 1 1 8 5 S 28080 Campylobacter upsaliensis + 0.00 1 1 3 3 S 1780362 Campylobacter geochelonis + 0.00 12 0 218 148 F 72293 Helicobacteraceae + 0.00 12 0 218 148 G 209 Helicobacter + 0.00 12 12 130 85 S 210 Helicobacter pylori + 0.00 7 0 1965 197 F 2808963 Arcobacteraceae + 0.00 5 0 30 9 G 2321187 Poseidonibacter + 0.00 5 5 30 9 S 1904463 Poseidonibacter lekithochrous + 0.00 2 0 94 69 G 2321111 Aliarcobacter + 0.00 2 2 17 11 S 28197 Aliarcobacter butzleri + 0.00 3 0 86 54 F 2771471 Thiovulaceae + 0.00 3 0 81 50 G 202746 Sulfurimonas + 0.00 3 3 13 7 S 2740405 Candidatus Sulfurimonas marisnigri + 0.00 16 3 672 421 C 28221 Deltaproteobacteria + 0.00 5 0 128 71 O 69541 Desulfuromonadales + 0.00 5 0 105 57 F 213422 Geobacteraceae + 0.00 3 1 26 19 G 28231 Geobacter + 0.00 2 2 5 2 S 345632 Geobacter pickeringii + 0.00 2 0 48 8 G 392332 Geoalkalibacter + 0.00 2 2 48 8 S 483547 Geoalkalibacter subterraneus + 0.00 4 0 21 13 O 2914038 Syntrophales + 0.00 4 0 21 13 F 213468 Syntrophaceae + 0.00 2 0 10 6 G 2357 Desulfomonile + 0.00 2 0 10 6 S 2358 Desulfomonile tiedjei + 0.00 2 2 10 6 S1 706587 Desulfomonile tiedjei DSM 6799 + 0.00 2 0 6 4 G 60892 Desulfobacca + 0.00 2 0 6 4 S 60893 Desulfobacca acetoxidans + 0.00 2 2 6 4 S1 880072 Desulfobacca acetoxidans DSM 11109 + 0.00 2 0 148 90 O 213115 Desulfovibrionales + 0.00 2 1 145 88 F 194924 Desulfovibrionaceae + 0.00 1 1 47 24 G 2035811 Pseudodesulfovibrio + 0.00 2 0 6 2 O 213462 Syntrophobacterales + 0.00 2 0 6 2 F 213465 Syntrophobacteraceae + 0.00 2 0 6 2 G 29526 Syntrophobacter + 0.00 2 0 6 2 S 119484 Syntrophobacter fumaroxidans + 0.00 2 2 6 2 S1 335543 Syntrophobacter fumaroxidans MPOB + 0.00 126 9 3842 2667 C 28211 Alphaproteobacteria + 0.00 67 6 1957 1319 O 356 Hyphomicrobiales + 0.00 17 1 576 430 F 82115 Rhizobiaceae + 0.00 9 1 419 334 F1 227290 Rhizobium/Agrobacterium group + 0.00 5 1 259 228 G 379 Rhizobium + 0.00 2 0 35 27 S 384 Rhizobium leguminosarum + 0.00 2 2 16 11 S1 386 Rhizobium leguminosarum bv. trifolii + 0.00 1 1 52 52 S 2267833 Rhizobium oryzihabitans + 0.00 1 1 5 5 S 648995 Rhizobium pusense + 0.00 2 1 98 54 G 357 Agrobacterium + 0.00 1 1 17 14 S 373 Agrobacterium vitis + 0.00 1 1 12 6 G 1903858 Pseudorhizobium + 0.00 4 0 67 26 G 34019 Liberibacter + 0.00 4 0 37 8 S 34020 Candidatus Liberibacter africanus + 0.00 4 4 35 7 S1 1277257 Candidatus Liberibacter africanus PTSAPSY + 0.00 3 0 49 39 F1 227292 Sinorhizobium/Ensifer group + 0.00 2 0 34 26 G 28105 Sinorhizobium + 0.00 2 2 13 9 S 382 Sinorhizobium meliloti + 0.00 1 1 15 13 G 106591 Ensifer + 0.00 9 0 393 211 F 41294 Bradyrhizobiaceae + 0.00 8 7 333 163 G 374 Bradyrhizobium + 0.00 1 0 183 63 G1 2631580 unclassified Bradyrhizobium + 0.00 1 1 5 5 S 114615 Bradyrhizobium sp. ORS 278 + 0.00 1 0 24 20 G 1073 Rhodopseudomonas + 0.00 1 1 19 17 S 1076 Rhodopseudomonas palustris + 0.00 7 0 68 20 O1 119042 Hyphomicrobiales incertae sedis + 0.00 7 0 55 15 G 573657 Candidatus Hodgkinia + 0.00 7 7 55 15 S 573658 Candidatus Hodgkinia cicadicola + 0.00 5 0 207 127 F 69277 Phyllobacteriaceae + 0.00 3 0 12 10 G 28100 Phyllobacterium + 0.00 3 0 11 9 G1 2638441 unclassified Phyllobacterium + 0.00 2 2 3 2 S 555316 Phyllobacterium sp. T1018 + 0.00 1 1 3 3 S 2718938 Phyllobacterium sp. 628 + 0.00 2 0 136 85 G 68287 Mesorhizobium + 0.00 1 0 107 59 G1 325217 unclassified Mesorhizobium + 0.00 1 1 2 2 S 2493680 Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 + 0.00 1 1 2 2 S 2725666 Mesorhizobium terrae + 0.00 4 0 41 29 F 255475 Aurantimonadaceae + 0.00 4 0 31 19 G 414371 Aureimonas + 0.00 4 0 21 9 G1 2615206 unclassified Aureimonas + 0.00 2 2 6 3 S 1349819 Aureimonas sp. AU20 + 0.00 2 2 9 1 S 1638161 Aureimonas sp. AU12 + 0.00 3 0 42 23 F 2831100 Boseaceae + 0.00 3 0 42 23 G 85413 Bosea + 0.00 3 0 39 20 G1 2653178 unclassified Bosea + 0.00 3 3 13 1 S 2020412 Bosea sp. ANAM02 + 0.00 3 0 104 77 F 772 Bartonellaceae + 0.00 3 0 104 77 G 773 Bartonella + 0.00 2 2 3 2 S 85701 Bartonella tribocorum + 0.00 1 0 7 4 S 155194 Bartonella bovis + 0.00 1 1 7 4 S1 1094491 Bartonella bovis 91-4 + 0.00 3 0 114 82 F 118882 Brucellaceae + 0.00 3 0 90 68 F1 2826938 Brucella/Ochrobactrum group + 0.00 3 0 89 67 G 234 Brucella + 0.00 1 1 43 35 S 529 Brucella anthropi + 0.00 1 1 4 1 S 36855 Brucella canis + 0.00 1 0 5 3 G1 2632610 unclassified Brucella + 0.00 1 1 3 1 S 2821140 Brucella sp. 458 + 0.00 2 1 44 28 F 45401 Hyphomicrobiaceae + 0.00 1 0 6 4 G 29407 Rhodoplanes + 0.00 1 0 6 4 G1 2619116 unclassified Rhodoplanes + 0.00 1 1 6 4 S 674703 Rhodoplanes sp. Z2-YC6860 + 0.00 2 0 18 11 F 2813035 Parvibaculaceae + 0.00 2 0 8 5 G 1541445 Candidatus Phaeomarinobacter + 0.00 2 2 8 5 S 1458461 Candidatus Phaeomarinobacter ectocarpi + 0.00 2 0 3 2 F 2723775 Lichenihabitantaceae + 0.00 2 2 3 2 G 2723776 Lichenihabitans + 0.00 1 0 71 58 F 119045 Methylobacteriaceae + 0.00 1 0 38 34 G 407 Methylobacterium + 0.00 1 1 4 4 S 270351 Methylobacterium aquaticum + 0.00 1 0 58 44 F 2831106 Devosiaceae + 0.00 1 0 7 3 G 1573407 Paradevosia + 0.00 1 1 7 3 S 1335043 Paradevosia shaoguanensis + 0.00 1 0 35 29 F 335928 Xanthobacteraceae + 0.00 1 0 8 8 G 279 Xanthobacter + 0.00 1 1 6 6 S 2528964 Xanthobacter dioxanivorans + 0.00 1 1 27 20 F 31993 Methylocystaceae + 0.00 20 0 435 295 O 204457 Sphingomonadales + 0.00 14 8 104 53 F 335929 Erythrobacteraceae + 0.00 5 0 49 20 F1 2800788 Erythrobacter/Porphyrobacter group + 0.00 5 0 39 10 G 1111 Porphyrobacter + 0.00 5 0 39 10 G1 2683265 unclassified Porphyrobacter + 0.00 5 5 36 8 S 2883480 Porphyrobacter sp. GA68 + 0.00 1 0 6 4 G 2800686 Tsuneonella + 0.00 1 1 4 2 S 2338327 Tsuneonella amylolytica + 0.00 6 0 291 213 F 41297 Sphingomonadaceae + 0.00 4 0 129 84 G 13687 Sphingomonas + 0.00 2 0 48 41 G1 196159 unclassified Sphingomonas + 0.00 1 1 7 7 S 2899123 Sphingomonas sp. DM2-R-LB4 + 0.00 1 1 3 3 S 1517554 Sphingomonas sp. HMP9 + 0.00 2 2 31 5 S 13689 Sphingomonas paucimobilis + 0.00 1 0 46 40 G 165695 Sphingobium + 0.00 1 0 17 15 G1 2611147 unclassified Sphingobium + 0.00 1 1 3 3 S 627192 Sphingobium sp. SYK-6 + 0.00 1 0 26 20 G 165697 Sphingopyxis + 0.00 1 0 13 12 G1 2614943 unclassified Sphingopyxis + 0.00 1 1 3 3 S 2911495 Sphingopyxis sp. BSN-002 + 0.00 7 0 391 283 O 204441 Rhodospirillales + 0.00 4 0 91 56 F 41295 Rhodospirillaceae + 0.00 1 0 16 9 G 1263978 Candidatus Endolissoclinum + 0.00 1 1 16 9 S 1263979 Candidatus Endolissoclinum faulkneri + 0.00 1 0 22 11 G 1612157 Pararhodospirillum + 0.00 1 0 22 11 S 1084 Pararhodospirillum photometricum + 0.00 1 1 22 11 S1 1150469 Pararhodospirillum photometricum DSM 122 + 0.00 1 0 4 2 G 1804663 Haematospirillum + 0.00 1 1 4 2 S 1549855 Haematospirillum jordaniae + 0.00 1 0 20 8 G 2705399 Hypericibacter + 0.00 1 1 17 6 S 2602015 Hypericibacter terrae + 0.00 2 0 158 116 F 433 Acetobacteraceae + 0.00 1 0 15 10 G 441 Gluconobacter + 0.00 1 0 9 4 S 442 Gluconobacter oxydans + 0.00 1 1 7 3 S1 290633 Gluconobacter oxydans 621H + 0.00 1 0 31 25 G 434 Acetobacter + 0.00 1 0 8 6 G1 151157 Acetobacter subgen. Acetobacter + 0.00 1 1 8 6 S 435 Acetobacter aceti + 0.00 1 0 99 87 F 2829815 Azospirillaceae + 0.00 1 0 8 6 G 1543705 Nitrospirillum + 0.00 1 0 8 6 S 28077 Nitrospirillum amazonense + 0.00 1 1 8 6 S1 1441467 Nitrospirillum amazonense CBAmc + 0.00 6 0 258 156 O 766 Rickettsiales + 0.00 5 1 146 87 F 942 Anaplasmataceae + 0.00 3 0 36 21 G 943 Ehrlichia + 0.00 3 3 21 15 G1 106178 canis group + 0.00 1 0 68 43 F1 952 Wolbachieae + 0.00 1 0 68 43 G 953 Wolbachia + 0.00 1 1 7 4 S 955 Wolbachia pipientis + 0.00 1 0 91 53 F 775 Rickettsiaceae + 0.00 1 0 10 5 G 2115980 Candidatus Phycorickettsia + 0.00 1 1 10 5 S 2115978 Candidatus Phycorickettsia trachydisci + 0.00 5 0 18 6 O 255473 Parvularculales + 0.00 5 5 18 6 F 255474 Parvularculaceae + 0.00 4 0 66 32 O 1921002 Holosporales + 0.00 4 0 54 23 F 44746 Holosporaceae + 0.00 3 0 9 2 G 2900571 Candidatus Gromoviella + 0.00 3 3 9 2 S 2806609 Candidatus Gromoviella agglomerans + 0.00 1 0 13 6 G 2654634 Candidatus Hydrogenosomobacter + 0.00 1 1 13 6 S 2558174 Candidatus Hydrogenosomobacter endosymbioticus + 0.00 3 0 52 33 O 54526 Pelagibacterales + 0.00 2 0 46 27 F 1655514 Pelagibacteraceae + 0.00 2 0 46 27 G 198251 Candidatus Pelagibacter + 0.00 2 0 34 16 G1 2647897 unclassified Candidatus Pelagibacter + 0.00 1 1 17 6 S 1977865 Candidatus Pelagibacter sp. RS40 + 0.00 1 1 8 6 S 2268451 Candidatus Pelagibacter sp. FZCC0015 + 0.00 1 0 6 6 O1 2813274 Pelagibacterales incertae sedis + 0.00 1 0 6 6 G 2045213 Candidatus Fonsibacter + 0.00 1 1 6 6 S 1925548 Candidatus Fonsibacter ubiquis + 0.00 3 0 369 303 O 204455 Rhodobacterales + 0.00 2 0 197 161 F 2854170 Roseobacteraceae + 0.00 1 0 23 11 G 97050 Ruegeria + 0.00 1 1 12 4 S 89184 Ruegeria pomeroyi + 0.00 1 0 10 10 G 191028 Leisingera + 0.00 1 0 4 4 S 133924 Leisingera methylohalidivorans + 0.00 1 1 4 4 S1 999552 Leisingera methylohalidivorans DSM 14336 + 0.00 1 1 157 130 F 31989 Rhodobacteraceae + 0.00 2 0 67 60 O 204458 Caulobacterales + 0.00 2 2 67 60 F 76892 Caulobacteraceae + 0.00 74 1 8671 2033 C 28216 Betaproteobacteria + 0.00 44 2 5319 1453 O 80840 Burkholderiales + 0.00 16 0 2941 650 F 119060 Burkholderiaceae + 0.00 11 0 1616 180 G 32008 Burkholderia + 0.00 6 0 77 33 G1 111527 pseudomallei group + 0.00 3 3 32 11 S 13373 Burkholderia mallei + 0.00 3 0 20 8 S 57975 Burkholderia thailandensis + 0.00 3 3 10 2 S1 271848 Burkholderia thailandensis E264 + 0.00 4 1 137 80 G1 87882 Burkholderia cepacia complex + 0.00 3 3 64 18 S 95486 Burkholderia cenocepacia + 0.00 1 0 8 7 S 337 Burkholderia glumae + 0.00 1 1 6 5 S1 626418 Burkholderia glumae BGR1 + 0.00 3 1 140 119 G 106589 Cupriavidus + 0.00 1 1 22 19 S 164546 Cupriavidus taiwanensis + 0.00 1 0 13 12 G1 2640874 unclassified Cupriavidus + 0.00 1 1 5 5 S 2839983 Cupriavidus sp. EM10 + 0.00 1 0 54 41 G 48736 Ralstonia + 0.00 1 1 19 14 S 305 Ralstonia solanacearum + 0.00 1 0 96 86 G 1822464 Paraburkholderia + 0.00 1 1 2 2 S 2654982 Paraburkholderia atlantica + 0.00 14 1 361 283 F 80864 Comamonadaceae + 0.00 3 3 73 39 G 34072 Variovorax + 0.00 2 0 56 43 G 12916 Acidovorax + 0.00 2 2 18 9 S 2743470 Acidovorax antarcticus + 0.00 2 2 26 23 G 80865 Delftia + 0.00 2 0 8 8 G 364316 Verminephrobacter + 0.00 2 0 8 8 S 364317 Verminephrobacter eiseniae + 0.00 2 2 8 8 S1 391735 Verminephrobacter eiseniae EF01-2 + 0.00 1 0 50 43 G 283 Comamonas + 0.00 1 1 6 5 S 1562974 Comamonas piscis + 0.00 1 0 2 2 G 2490452 Serpentinimonas + 0.00 1 1 1 1 S 1458425 Serpentinimonas raichei + 0.00 1 0 13 13 G 52972 Polaromonas + 0.00 1 0 10 10 G1 2638319 unclassified Polaromonas + 0.00 1 1 4 4 S 296591 Polaromonas sp. JS666 + 0.00 1 0 7 6 G 174951 Ramlibacter + 0.00 1 1 7 6 S 94132 Ramlibacter tataouinensis + 0.00 7 0 283 191 F 506 Alcaligenaceae + 0.00 5 0 108 56 G 517 Bordetella + 0.00 2 0 22 3 S 519 Bordetella parapertussis + 0.00 2 2 22 3 S1 1208660 Bordetella parapertussis Bpp5 + 0.00 1 1 23 5 S 520 Bordetella pertussis + 0.00 1 1 4 4 S 123899 Bordetella trematum + 0.00 1 0 10 6 G1 2630031 unclassified Bordetella + 0.00 1 1 7 4 S 1746199 Bordetella sp. N + 0.00 1 0 22 9 G 29574 Taylorella + 0.00 1 0 10 2 S 29575 Taylorella equigenitalis + 0.00 1 1 9 1 S1 743973 Taylorella equigenitalis ATCC 35865 + 0.00 1 0 20 15 G 1921582 Orrella + 0.00 1 1 10 8 S 2163011 Orrella marina + 0.00 4 0 1583 201 F 75682 Oxalobacteraceae + 0.00 2 0 123 103 F1 2895353 Massilia group + 0.00 2 0 115 95 G 149698 Massilia + 0.00 1 1 6 5 S 2045208 Massilia violaceinigra + 0.00 1 0 47 39 G1 2609279 unclassified Massilia + 0.00 1 1 9 5 S 1707785 Massilia sp. WG5 + 0.00 1 0 34 29 G 963 Herbaspirillum + 0.00 1 1 6 5 S 964 Herbaspirillum seropedicae + 0.00 1 0 21 21 G 202907 Collimonas + 0.00 1 0 8 8 S 158899 Collimonas fungivorans + 0.00 1 1 3 3 S1 1005048 Collimonas fungivorans Ter331 + 0.00 1 0 77 63 O1 224471 Burkholderiales genera incertae sedis + 0.00 1 0 12 10 G 212743 Rhizobacter + 0.00 1 0 5 4 G1 2640088 unclassified Rhizobacter + 0.00 1 1 5 4 S 2753607 Rhizobacter sp. AJA081-3 + 0.00 27 0 1699 311 O 206351 Neisseriales + 0.00 26 2 1560 201 F 481 Neisseriaceae + 0.00 24 0 1416 115 G 482 Neisseria + 0.00 12 12 48 20 S 487 Neisseria meningitidis + 0.00 4 4 34 10 S 2666100 Neisseria brasiliensis + 0.00 3 3 29 6 S 485 Neisseria gonorrhoeae + 0.00 2 2 1211 4 S 607712 Neisseria shayeganii + 0.00 1 1 7 7 S 484 Neisseria flavescens + 0.00 1 1 7 5 S 495 Neisseria elongata + 0.00 1 1 3 3 S 490 Neisseria sicca + 0.00 1 0 137 108 F 1499392 Chromobacteriaceae + 0.00 1 0 21 10 G 168470 Laribacter + 0.00 1 0 21 10 S 168471 Laribacter hongkongensis + 0.00 1 1 18 7 S1 557598 Laribacter hongkongensis HLHK9 + 0.00 1 0 1470 124 O 32003 Nitrosomonadales + 0.00 1 0 20 18 F 2772226 Sulfuricellaceae + 0.00 1 0 16 15 G 1778653 Sulfuriferula + 0.00 1 1 9 8 S 2675298 Sulfuriferula nivalis + 0.00 1 0 92 76 O 206389 Rhodocyclales + 0.00 1 0 30 20 F 2008795 Azonexaceae + 0.00 1 0 10 7 G 88875 Ferribacterium + 0.00 1 1 10 7 S 76259 Ferribacterium limneticum + 0.00 8 0 113 75 C 1553900 Oligoflexia + 0.00 5 1 38 20 O 2024979 Bacteriovoracales + 0.00 4 0 20 10 F 263369 Bacteriovoracaceae + 0.00 4 0 20 10 G 146784 Bacteriovorax + 0.00 4 4 20 10 S 960 Bacteriovorax stolpii + 0.00 3 0 28 19 O 2024973 Silvanigrellales + 0.00 3 0 28 19 F 2024974 Silvanigrellaceae + 0.00 3 0 10 7 G 2024975 Silvanigrella + 0.00 3 3 10 7 S 1915309 Silvanigrella aquatica + 0.00 1 0 43 13 C 1807140 Acidithiobacillia + 0.00 1 0 43 13 O 225057 Acidithiobacillales + 0.00 1 0 43 13 F 225058 Acidithiobacillaceae + 0.00 1 0 43 13 G 119977 Acidithiobacillus + 0.00 1 0 10 6 S 930 Acidithiobacillus thiooxidans + 0.00 1 1 10 6 S1 637390 Acidithiobacillus thiooxidans ATCC 19377 + 0.00 442 0 46698 14140 D1 1783270 FCB group + 0.00 436 1 46653 14115 D2 68336 Bacteroidetes/Chlorobi group + 0.00 435 16 46573 14060 P 976 Bacteroidetes + 0.00 304 0 14788 10728 C 200643 Bacteroidia + 0.00 304 23 13310 10670 O 171549 Bacteroidales + 0.00 125 0 4956 4094 F 171552 Prevotellaceae + 0.00 122 10 4833 3994 G 838 Prevotella + 0.00 48 45 1915 1484 S 28133 Prevotella nigrescens + 0.00 3 3 26 26 S1 702439 Prevotella nigrescens F0103 + 0.00 42 42 1218 1080 S 76123 Prevotella enoeca + 0.00 11 11 166 129 S 28131 Prevotella intermedia + 0.00 3 0 50 41 G1 2638335 unclassified Prevotella + 0.00 1 0 15 10 S 652716 Prevotella sp. oral taxon 299 + 0.00 1 1 15 10 S1 575614 Prevotella sp. oral taxon 299 str. F0039 + 0.00 1 1 2 2 S 2913619 Prevotella sp. E2-25 + 0.00 1 1 8 8 S 2913620 Prevotella sp. E2-28 + 0.00 2 2 25 23 S 28129 Prevotella denticola + 0.00 2 2 32 26 S 28132 Prevotella melaninogenica + 0.00 2 2 22 22 S 28137 Prevotella veroralis + 0.00 1 1 53 38 S 28135 Prevotella oris + 0.00 1 0 12 7 S 589437 Prevotella scopos + 0.00 1 1 12 7 S1 1236518 Prevotella scopos JCM 17725 + 0.00 3 0 118 97 G 577309 Paraprevotella + 0.00 3 0 118 97 S 454155 Paraprevotella xylaniphila + 0.00 3 3 118 97 S1 762982 Paraprevotella xylaniphila YIT 11841 + 0.00 65 4 2885 2322 F 815 Bacteroidaceae + 0.00 38 1 1908 1542 G 909656 Phocaeicola + 0.00 34 34 1075 857 S 821 Phocaeicola vulgatus + 0.00 3 3 64 45 S 357276 Phocaeicola dorei + 0.00 23 7 755 630 G 816 Bacteroides + 0.00 4 0 11 4 S 151276 Bacteroides coprosuis + 0.00 4 4 11 4 S1 679937 Bacteroides coprosuis DSM 18011 + 0.00 2 2 79 77 S 820 Bacteroides uniformis + 0.00 2 2 131 122 S 28111 Bacteroides eggerthii + 0.00 2 2 45 45 S 28116 Bacteroides ovatus + 0.00 2 2 75 47 S 246787 Bacteroides cellulosilyticus + 0.00 2 2 13 11 S 291644 Bacteroides salyersiae + 0.00 1 1 35 34 S 817 Bacteroides fragilis + 0.00 1 1 13 5 S 46506 Bacteroides stercoris + 0.00 55 0 3164 2463 F 2005525 Tannerellaceae + 0.00 41 39 2437 1906 G 375288 Parabacteroides + 0.00 1 1 12 6 S 823 Parabacteroides distasonis + 0.00 1 1 28 27 S 46503 Parabacteroides merdae + 0.00 14 0 727 557 G 195950 Tannerella + 0.00 14 12 727 557 S 28112 Tannerella forsythia + 0.00 2 2 6 6 S1 203275 Tannerella forsythia 92A2 + 0.00 21 0 723 617 F 171551 Porphyromonadaceae + 0.00 21 0 723 617 G 836 Porphyromonas + 0.00 20 20 637 567 S 28124 Porphyromonas endodontalis + 0.00 1 1 11 11 S 36874 Porphyromonas cangingivalis + 0.00 14 0 28 16 F 1853231 Odoribacteraceae + 0.00 14 0 23 11 G 574697 Butyricimonas + 0.00 12 12 18 7 S 2093856 Butyricimonas faecalis + 0.00 2 2 5 4 S 544645 Butyricimonas virosa + 0.00 1 0 15 15 F 2005473 Muribaculaceae + 0.00 1 0 10 10 G 2518495 Duncaniella + 0.00 1 1 4 4 S 2518971 Duncaniella dubosii + 0.00 79 0 27087 2123 C 117743 Flavobacteriia + 0.00 79 0 27087 2123 O 200644 Flavobacteriales + 0.00 49 3 18422 1402 F 49546 Flavobacteriaceae + 0.00 15 1 11851 361 G 237 Flavobacterium + 0.00 8 1 219 150 G1 196869 unclassified Flavobacterium + 0.00 6 6 21 7 S 1979344 Flavobacterium sp. MDT1-60 + 0.00 1 1 7 5 S 1179672 Flavobacterium sp. KBS0721 + 0.00 2 1 794 7 S 996 Flavobacterium columnare + 0.00 1 1 1 1 S1 1041826 Flavobacterium columnare ATCC 49512 + 0.00 2 2 24 7 S 2748320 Flavobacterium inviolabile + 0.00 1 1 10530 8 S 2024526 Flavobacterium sediminilitoris + 0.00 1 1 20 9 S 2906077 Flavobacterium davisii + 0.00 13 0 2114 160 G 52959 Polaribacter + 0.00 13 0 2058 118 G1 196858 unclassified Polaribacter + 0.00 13 13 27 1 S 2745561 Polaribacter sp. HaHaR_3_91 + 0.00 3 2 86 55 G 1016 Capnocytophaga + 0.00 1 1 4 4 S 45243 Capnocytophaga haemolytica + 0.00 3 0 74 49 G 286104 Winogradskyella + 0.00 3 0 37 24 G1 2615021 unclassified Winogradskyella + 0.00 2 2 14 9 S 2929510 Winogradskyella sp. MH6 + 0.00 1 1 6 3 S 1936080 Winogradskyella sp. J14-2 + 0.00 3 0 44 34 G 104264 Cellulophaga + 0.00 3 3 8 5 S 979 Cellulophaga lytica + 0.00 3 0 35 31 G 290174 Aquimarina + 0.00 3 0 35 31 G1 2627091 unclassified Aquimarina + 0.00 2 2 8 8 S 2736252 Aquimarina sp. TRL1 + 0.00 1 1 8 7 S 1714849 Aquimarina sp. AD10 + 0.00 1 0 75 46 G 363408 Nonlabens + 0.00 1 0 6 5 S 930802 Nonlabens marinus + 0.00 1 1 6 5 S1 1454201 Nonlabens marinus S1-08 + 0.00 1 0 1399 19 G 252356 Maribacter + 0.00 1 0 1386 8 G1 2615042 unclassified Maribacter + 0.00 1 1 1382 4 S 313603 Maribacter sp. HTCC2170 + 0.00 1 0 30 22 G 291183 Lacinutrix + 0.00 1 0 27 20 G1 2647285 unclassified Lacinutrix + 0.00 1 1 10 9 S 2653681 Lacinutrix sp. WUR7 + 0.00 1 0 71 51 G 292691 Gramella + 0.00 1 0 20 20 G1 2615027 unclassified Gramella + 0.00 1 1 11 11 S 2920386 Gramella sp. GC03-9 + 0.00 1 0 5 3 G 343334 Costertonia + 0.00 1 1 5 3 S 343403 Costertonia aggregata + 0.00 1 0 71 53 G 104267 Tenacibaculum + 0.00 1 1 5 3 S 104268 Tenacibaculum mesophilum + 0.00 18 0 7022 532 F 2762318 Weeksellaceae + 0.00 11 0 5487 371 F1 2782232 Chryseobacterium group + 0.00 11 4 4232 327 G 59732 Chryseobacterium + 0.00 3 3 12 9 S 1493872 Chryseobacterium shandongense + 0.00 2 0 1310 149 G1 2593645 unclassified Chryseobacterium + 0.00 1 1 16 12 S 2015076 Chryseobacterium sp. T16E-39 + 0.00 1 1 1114 10 S 2879938 Chryseobacterium sp. MEBOG06 + 0.00 1 1 1122 2 S 112234 Chryseobacterium joostei + 0.00 1 1 1175 10 S 246 Chryseobacterium balustinum + 0.00 4 0 39 30 G 59734 Empedobacter + 0.00 4 4 16 10 S 343874 Empedobacter falsenii + 0.00 1 0 8 8 G 28250 Ornithobacterium + 0.00 1 1 8 8 S 28251 Ornithobacterium rhinotracheale + 0.00 1 0 31 20 G 501783 Cloacibacterium + 0.00 1 1 21 12 S 2004710 Cloacibacterium caeni + 0.00 1 0 31 24 G 1778601 Apibacter + 0.00 1 1 15 10 S 2500547 Apibacter raozihei + 0.00 8 0 46 23 O1 313602 Flavobacteriales incertae sedis + 0.00 8 0 42 21 G 336809 Candidatus Sulcia + 0.00 8 8 42 21 S 336810 Candidatus Sulcia muelleri + 0.00 4 0 177 105 F 39782 Blattabacteriaceae + 0.00 4 2 177 105 G 34098 Blattabacterium + 0.00 2 2 126 78 S 1653831 Blattabacterium cuenoti + 0.00 22 0 2136 466 C 768503 Cytophagia + 0.00 22 2 2136 466 O 768507 Cytophagales + 0.00 9 0 34 16 F 1937968 Bernardetiaceae + 0.00 9 0 34 16 G 1937972 Bernardetia + 0.00 9 0 34 16 S 999 Bernardetia litoralis + 0.00 9 9 34 16 S1 880071 Bernardetia litoralis DSM 6794 + 0.00 5 1 186 112 F 1853232 Hymenobacteraceae + 0.00 3 0 24 12 G 1379908 Rufibacter + 0.00 3 3 14 5 S 512763 Rufibacter tibetensis + 0.00 1 0 12 8 G 299566 Adhaeribacter + 0.00 1 1 6 3 S 2086471 Adhaeribacter swui + 0.00 3 0 112 79 F 89373 Cytophagaceae + 0.00 3 0 86 59 G 107 Spirosoma + 0.00 2 0 34 29 G1 2621999 unclassified Spirosoma + 0.00 2 2 8 7 S 2898794 Spirosoma sp. RHs26 + 0.00 1 1 11 3 S 2057025 Spirosoma pollinicola + 0.00 2 0 81 57 F 2896860 Spirosomaceae + 0.00 2 0 23 15 G 105 Runella + 0.00 2 0 8 5 S 106 Runella slithyformis + 0.00 2 2 8 5 S1 761193 Runella slithyformis DSM 19594 + 0.00 1 0 139 101 F 563798 Cyclobacteriaceae + 0.00 1 0 51 29 G 246875 Algoriphagus + 0.00 1 1 14 10 S 388413 Algoriphagus machipongonensis + 0.00 6 0 1937 332 C 117747 Sphingobacteriia + 0.00 6 0 1937 332 O 200666 Sphingobacteriales + 0.00 6 0 1937 332 F 84566 Sphingobacteriaceae + 0.00 4 0 1599 93 G 28453 Sphingobacterium + 0.00 4 0 1537 40 G1 2609468 unclassified Sphingobacterium + 0.00 2 2 1489 11 S 2795738 Sphingobacterium sp. UDSM-2020 + 0.00 2 2 14 5 S 2907623 Sphingobacterium sp. SRCM116780 + 0.00 1 0 147 97 G 84567 Pedobacter + 0.00 1 1 8 7 S 188932 Pedobacter cryoconitis + 0.00 1 0 111 84 G 423349 Mucilaginibacter + 0.00 1 0 32 23 G1 2617802 unclassified Mucilaginibacter + 0.00 1 1 11 8 S 2728022 Mucilaginibacter sp. F39-2 + 0.00 6 0 271 179 C 1853228 Chitinophagia + 0.00 6 0 271 179 O 1853229 Chitinophagales + 0.00 6 1 271 179 F 563835 Chitinophagaceae + 0.00 1 0 18 12 G 379899 Niabella + 0.00 1 0 11 5 S 446683 Niabella soli + 0.00 1 1 11 5 S1 929713 Niabella soli DSM 19437 + 0.00 1 0 10 7 G 649461 Lacibacter + 0.00 1 0 10 7 G1 2630913 unclassified Lacibacter + 0.00 1 1 10 7 S 2760713 Lacibacter sp. S13-6-6 + 0.00 1 0 12 11 G 1004303 Ferruginibacter + 0.00 1 1 6 6 S 563172 Ferruginibacter lapsinanis + 0.00 1 0 56 33 G 1769012 Arachidicoccus + 0.00 1 0 31 20 G1 2636138 unclassified Arachidicoccus + 0.00 1 1 19 9 S 2545455 Arachidicoccus sp. B3-10 + 0.00 1 0 18 4 G 2812019 Pseudocnuella + 0.00 1 1 18 4 S 2502779 Pseudocnuella soli + 0.00 2 0 24 11 O 1100069 Bacteroidetes Order II. Incertae sedis + 0.00 2 0 24 11 F 563843 Rhodothermaceae + 0.00 1 0 5 3 G 29548 Rhodothermus + 0.00 1 0 5 3 S 29549 Rhodothermus marinus + 0.00 1 1 2 1 S1 762570 Rhodothermus marinus SG0.5JP17-172 + 0.00 1 0 9 4 G 146918 Salinibacter + 0.00 1 1 9 4 S 146919 Salinibacter ruber + 0.00 6 0 35 18 P 142182 Gemmatimonadetes + 0.00 6 0 35 18 C 219685 Gemmatimonadetes + 0.00 6 0 35 18 O 219686 Gemmatimonadales + 0.00 6 0 35 18 F 219687 Gemmatimonadaceae + 0.00 4 4 12 8 G 173479 Gemmatimonas + 0.00 2 0 19 9 G 1706036 Gemmatirosa + 0.00 2 2 19 9 S 861299 Gemmatirosa kalamazoonesis + 0.00 76 0 1855 1496 P 203691 Spirochaetes + 0.00 76 0 1855 1496 C 203692 Spirochaetia + 0.00 66 3 1617 1343 O 136 Spirochaetales + 0.00 59 0 1410 1215 F 2845253 Treponemataceae + 0.00 59 5 1410 1215 G 157 Treponema + 0.00 16 0 149 114 G1 2638727 unclassified Treponema + 0.00 15 15 140 106 S 2766701 Treponema sp. Marseille-Q4132 + 0.00 1 1 9 8 S 1539298 Treponema sp. OMZ 838 + 0.00 15 0 201 175 S 53419 Treponema socranskii + 0.00 15 15 201 175 S1 69713 Treponema socranskii subsp. buccale + 0.00 9 4 271 244 S 158 Treponema denticola + 0.00 2 2 34 34 S1 999426 Treponema denticola AL-2 + 0.00 1 1 1 1 S1 999430 Treponema denticola ATCC 35404 + 0.00 1 1 3 3 S1 999432 Treponema denticola H-22 + 0.00 1 1 9 8 S1 999434 Treponema denticola OTK + 0.00 8 8 240 225 S 69710 Treponema vincentii + 0.00 4 4 78 61 S 409322 Treponema pedis + 0.00 1 0 6 4 S 81028 Treponema brennaborense + 0.00 1 1 6 4 S1 906968 Treponema brennaborense DSM 12168 + 0.00 1 1 22 18 S 138851 Treponema parvum + 0.00 2 0 46 34 F 137 Spirochaetaceae + 0.00 2 0 12 9 G 2035349 Oceanispirochaeta + 0.00 2 2 12 9 S 2518645 Oceanispirochaeta crateris + 0.00 2 1 117 67 F 1643685 Borreliaceae + 0.00 1 1 70 40 G 138 Borrelia + 0.00 8 0 158 99 O 1643688 Leptospirales + 0.00 8 0 158 99 F 170 Leptospiraceae + 0.00 8 1 152 95 G 171 Leptospira + 0.00 7 0 27 15 S 173 Leptospira interrogans + 0.00 7 7 22 10 S1 214675 Leptospira interrogans serovar Manilae + 0.00 2 0 80 54 O 1643686 Brachyspirales + 0.00 2 0 80 54 F 143786 Brachyspiraceae + 0.00 2 1 80 54 G 29521 Brachyspira + 0.00 1 0 15 11 S 84378 Brachyspira murdochii + 0.00 1 1 15 11 S1 526224 Brachyspira murdochii DSM 12563 + 0.00 61 0 3243 1585 P 32066 Fusobacteria + 0.00 61 0 3243 1585 C 203490 Fusobacteriia + 0.00 61 0 3243 1585 O 203491 Fusobacteriales + 0.00 50 2 2928 1352 F 203492 Fusobacteriaceae + 0.00 48 0 2856 1322 G 848 Fusobacterium + 0.00 24 3 817 607 S 859 Fusobacterium necrophorum + 0.00 21 21 769 566 S1 143387 Fusobacterium necrophorum subsp. funduliforme + 0.00 18 0 439 356 S 851 Fusobacterium nucleatum + 0.00 7 6 212 188 S1 76859 Fusobacterium nucleatum subsp. animalis + 0.00 1 1 64 59 S2 457405 Fusobacterium nucleatum subsp. animalis 7_1 + 0.00 4 4 67 46 S1 76856 Fusobacterium nucleatum subsp. nucleatum + 0.00 4 4 55 28 S1 76857 Fusobacterium nucleatum subsp. polymorphum + 0.00 3 2 20 16 S1 155615 Fusobacterium nucleatum subsp. vincentii + 0.00 1 1 11 7 S2 1307427 Fusobacterium nucleatum subsp. vincentii ChDC F8 + 0.00 2 2 39 22 S 285729 Fusobacterium canifelinum + 0.00 2 2 13 7 S 1755100 Fusobacterium gastrosuis + 0.00 1 0 34 12 S 1583098 Fusobacterium hwasookii + 0.00 1 1 12 5 S1 1307442 Fusobacterium hwasookii ChDC F174 + 0.00 1 0 36 29 G1 2648384 unclassified Fusobacterium + 0.00 1 1 33 26 S 2764326 Fusobacterium sp. NSJ-57 + 0.00 11 0 305 229 F 1129771 Leptotrichiaceae + 0.00 9 0 199 146 G 32067 Leptotrichia + 0.00 4 4 21 14 S 109328 Leptotrichia trevisanii + 0.00 3 3 30 19 S 157687 Leptotrichia wadei + 0.00 2 0 49 42 G1 2633022 unclassified Leptotrichia + 0.00 2 2 18 18 S 712357 Leptotrichia sp. oral taxon 212 + 0.00 1 0 48 42 G 34104 Streptobacillus + 0.00 1 0 48 42 S 34105 Streptobacillus moniliformis + 0.00 1 1 1 1 S1 519441 Streptobacillus moniliformis DSM 12112 + 0.00 1 0 20 11 G 168808 Sneathia + 0.00 1 1 20 11 S 187101 Sneathia vaginalis + 0.00 43 0 5156 498 D1 1783257 PVC group + 0.00 29 1 2051 316 P 203682 Planctomycetes + 0.00 21 6 412 260 C 203683 Planctomycetia + 0.00 10 0 180 111 O 2691354 Pirellulales + 0.00 6 3 112 67 F 2691357 Pirellulaceae + 0.00 2 0 8 5 G 1579505 Rubripirellula + 0.00 2 2 8 5 S 1930273 Rubripirellula lacrimiformis + 0.00 1 0 5 4 G 1579506 Roseimaritima + 0.00 1 1 4 3 S 1930274 Roseimaritima multifibrata + 0.00 4 0 63 39 F 2691359 Lacipirellulaceae + 0.00 4 0 42 19 G 2691417 Lacipirellula + 0.00 4 4 29 12 S 2650471 Lacipirellula parvula + 0.00 4 0 138 97 O 112 Planctomycetales + 0.00 4 0 138 97 F 126 Planctomycetaceae + 0.00 2 1 81 58 G 1649453 Gimesia + 0.00 1 1 23 20 S 2527964 Gimesia aquarii + 0.00 1 0 5 4 G 2795776 Calycomorphotria + 0.00 1 1 5 4 S 2528027 Calycomorphotria hydatis + 0.00 1 0 7 4 G 2795780 Symmachiella + 0.00 1 1 7 4 S 2527995 Symmachiella dynata + 0.00 1 0 24 17 O 2691355 Gemmatales + 0.00 1 0 24 17 F 1914233 Gemmataceae + 0.00 1 0 1 1 G 2051044 Tuwongella + 0.00 1 1 1 1 S 692036 Tuwongella immobilis + 0.00 7 2 1611 38 C 666505 Phycisphaerae + 0.00 2 0 29 10 O 666506 Phycisphaerales + 0.00 2 2 29 10 F 666507 Phycisphaeraceae + 0.00 2 2 1562 20 O 2483366 Sedimentisphaerales + 0.00 1 0 14 7 O 1771349 Tepidisphaerales + 0.00 1 0 14 7 F 1771355 Tepidisphaeraceae + 0.00 1 0 14 7 G 2807511 Humisphaera + 0.00 1 1 14 7 S 2807512 Humisphaera borealis + 0.00 9 0 196 87 P 74201 Verrucomicrobia + 0.00 5 0 25 14 C 1955630 Methylacidiphilae + 0.00 5 0 25 14 O 717963 Methylacidiphilales + 0.00 5 0 25 14 F 717964 Methylacidiphilaceae + 0.00 5 2 25 14 G 511745 Methylacidiphilum + 0.00 3 0 13 5 S 431057 Methylacidiphilum kamchatkense + 0.00 3 3 13 5 S1 1202785 Methylacidiphilum kamchatkense Kam1 + 0.00 2 0 93 30 C 414999 Opitutae + 0.00 2 0 30 20 O 415000 Opitutales + 0.00 2 2 30 20 F 134623 Opitutaceae + 0.00 1 0 51 31 C 203494 Verrucomicrobiae + 0.00 1 0 51 31 O 48461 Verrucomicrobiales + 0.00 1 0 19 14 F 1647988 Akkermansiaceae + 0.00 1 0 19 14 G 239934 Akkermansia + 0.00 1 1 9 5 S 1679444 Akkermansia glycaniphila + 0.00 1 0 26 11 P1 326457 Verrucomicrobia incertae sedis + 0.00 1 0 26 11 G 1541670 Methylacidimicrobium + 0.00 1 1 26 11 G1 2730358 unclassified Methylacidimicrobium + 0.00 2 0 3 2 P 67812 Candidatus Omnitrophica + 0.00 2 0 3 2 G 2789201 Candidatus Velamenicoccus + 0.00 2 2 3 2 S 1930593 Candidatus Velamenicoccus archaeovorus + 0.00 2 0 2889 83 P 204428 Chlamydiae + 0.00 2 0 2889 83 C 204429 Chlamydiia + 0.00 2 0 2809 41 O 1963360 Parachlamydiales + 0.00 1 0 10 8 F 92712 Simkaniaceae + 0.00 1 0 10 8 G 34093 Simkania + 0.00 1 0 10 8 S 83561 Simkania negevensis + 0.00 1 1 10 8 S1 331113 Simkania negevensis Z + 0.00 1 0 1413 8 F 689704 Rhabdochlamydiaceae + 0.00 1 1 1413 8 G 292833 Candidatus Rhabdochlamydia + 0.00 1 1 10 5 P 134625 Kiritimatiellaeota + 0.00 17 0 186 74 D1 2323 Bacteria incertae sedis + 0.00 17 0 186 74 D2 1783234 Bacteria candidate phyla + 0.00 6 0 92 49 P 95818 Candidatus Saccharibacteria + 0.00 4 0 28 25 C 2093818 Candidatus Saccharimonia + 0.00 4 0 28 25 O 2093819 Candidatus Nanosynbacterales + 0.00 4 0 28 25 F 2093822 Candidatus Nanosynbacteraceae + 0.00 4 0 28 25 G 2093823 Candidatus Nanosynbacter + 0.00 2 2 14 13 S 2572088 Candidatus Nanosynbacter featherlites + 0.00 1 1 8 7 S 2093824 Candidatus Nanosynbacter lyticus + 0.00 1 0 4 4 G1 2899132 unclassified Nanosynbacter + 0.00 1 1 4 4 S 2899133 Nanosynbacter sp. HMT-352 + 0.00 2 0 47 18 G 2905967 Candidatus Minimicrobia + 0.00 2 2 47 18 S 2841264 Candidatus Minimicrobia vallesae + 0.00 6 0 33 9 D3 95901 Candidatus Dependentiae + 0.00 6 0 33 9 C 2497643 Candidatus Babeliae + 0.00 6 0 33 9 O 2497644 Candidatus Babeliales + 0.00 6 0 33 9 F 2497645 Candidatus Babeliaceae + 0.00 6 0 33 9 G 1551504 Candidatus Babela + 0.00 6 6 33 9 S 673862 Candidatus Babela massiliensis + 0.00 4 0 39 7 P 67810 Candidatus Bipolaricaulota + 0.00 4 0 39 7 G 2250122 Candidatus Bipolaricaulis + 0.00 4 4 39 7 S 2026885 Candidatus Bipolaricaulis anaerobius + 0.00 1 0 17 6 P 221235 Candidatus Absconditabacteria + 0.00 1 0 17 6 O 2900568 Candidatus Absconditabacterales + 0.00 1 0 17 6 F 2900569 Candidatus Absconditicoccaceae + 0.00 1 0 17 6 G 2900570 Candidatus Absconditicoccus + 0.00 1 1 17 6 S 2735562 Candidatus Absconditicoccus praedator + 0.00 14 0 190 82 P 200783 Aquificae + 0.00 14 0 190 82 C 187857 Aquificae + 0.00 11 0 162 63 O 32069 Aquificales + 0.00 6 4 84 35 F 64898 Aquificaceae + 0.00 2 0 7 2 G 2713 Aquifex + 0.00 2 0 7 2 S 63363 Aquifex aeolicus + 0.00 2 2 7 2 S1 224324 Aquifex aeolicus VF5 + 0.00 4 0 47 13 O1 90150 Aquificales genera incertae sedis + 0.00 4 0 47 13 G 412592 Thermosulfidibacter + 0.00 4 0 47 13 S 412593 Thermosulfidibacter takaii + 0.00 4 4 47 13 S1 1298851 Thermosulfidibacter takaii ABI70S6 + 0.00 1 0 31 15 F 224027 Hydrogenothermaceae + 0.00 1 0 25 11 G 182899 Persephonella + 0.00 1 0 25 11 S 309805 Persephonella marina + 0.00 1 1 25 11 S1 123214 Persephonella marina EX-H1 + 0.00 3 0 28 19 O 1485951 Desulfurobacteriales + 0.00 3 2 28 19 F 558314 Desulfurobacteriaceae + 0.00 1 0 12 9 G 64159 Desulfurobacterium + 0.00 1 0 12 9 S 64160 Desulfurobacterium thermolithotrophum + 0.00 1 1 12 9 S1 868864 Desulfurobacterium thermolithotrophum DSM 11699 + 0.00 6 0 291 144 P 200918 Thermotogae + 0.00 6 1 291 144 C 188708 Thermotogae + 0.00 3 0 192 86 O 2419 Thermotogales + 0.00 3 0 54 31 F 188709 Thermotogaceae + 0.00 2 2 32 19 G 2335 Thermotoga + 0.00 1 0 22 12 G 1643951 Pseudothermotoga + 0.00 1 0 13 6 S 119394 Pseudothermotoga thermarum + 0.00 1 1 13 6 S1 688269 Pseudothermotoga thermarum DSM 5069 + 0.00 2 0 26 15 O 1643946 Kosmotogales + 0.00 2 0 26 15 F 1643948 Kosmotogaceae + 0.00 2 0 7 2 G 1184396 Mesotoga + 0.00 1 0 4 1 S 1184387 Mesotoga prima + 0.00 1 1 4 1 S1 660470 Mesotoga prima MesG1.Ag.4.2 + 0.00 1 1 3 1 S 1236046 Mesotoga infera + 0.00 5 0 70 36 P 200940 Thermodesulfobacteria + 0.00 5 0 70 36 C 67799 Thermodesulfobacteria + 0.00 5 0 70 36 O 188710 Thermodesulfobacteriales + 0.00 5 4 70 36 F 188711 Thermodesulfobacteriaceae + 0.00 1 0 3 3 G 241192 Thermodesulfatator + 0.00 1 0 3 3 S 171695 Thermodesulfatator indicus + 0.00 1 1 3 3 S1 667014 Thermodesulfatator indicus DSM 15286 + 0.00 4 0 24 12 P 67818 Atribacterota + 0.00 4 0 24 12 C 2847774 Atribacteria + 0.00 4 0 24 12 O 2847775 Atribacterales + 0.00 4 0 24 12 F 2847776 Atribacteraceae + 0.00 4 0 24 12 G 2847777 Atribacter + 0.00 4 4 24 12 S 2847778 Atribacter laminatus + 0.00 3 0 89 49 P 508458 Synergistetes + 0.00 3 0 89 49 C 649775 Synergistia + 0.00 3 0 89 49 O 649776 Synergistales + 0.00 3 0 89 49 F 649777 Synergistaceae + 0.00 2 0 20 20 G 1434006 Fretibacterium + 0.00 2 2 20 20 S 651822 Fretibacterium fastidiosum + 0.00 1 0 4 3 G 49894 Acetomicrobium + 0.00 1 0 4 3 S 97477 Acetomicrobium mobile + 0.00 1 1 4 3 S1 891968 Acetomicrobium mobile DSM 13181 + 0.00 2 0 21 10 P 2138240 Coprothermobacterota + 0.00 2 0 21 10 C 2138243 Coprothermobacteria + 0.00 2 0 21 10 O 2138246 Coprothermobacterales + 0.00 2 0 21 10 F 2138247 Coprothermobacteraceae + 0.00 2 0 21 10 G 68335 Coprothermobacter + 0.00 2 0 21 10 S 35786 Coprothermobacter proteolyticus + 0.00 2 2 21 10 S1 309798 Coprothermobacter proteolyticus DSM 5265 + 0.00 1 0 692 31 P 200930 Deferribacteres + 0.00 1 0 692 31 C 68337 Deferribacteres + 0.00 1 0 692 31 O 191393 Deferribacterales + 0.00 1 0 692 31 F 191394 Deferribacteraceae + 0.00 1 0 19 14 G 117999 Denitrovibrio + 0.00 1 0 19 14 S 118000 Denitrovibrio acetiphilus + 0.00 1 1 19 14 S1 522772 Denitrovibrio acetiphilus DSM 12809 + 0.00 1 0 93 63 P 57723 Acidobacteria + 0.00 1 0 56 41 C 204432 Acidobacteriia + 0.00 1 0 52 37 O 204433 Acidobacteriales + 0.00 1 0 52 37 F 204434 Acidobacteriaceae + 0.00 1 0 9 7 G 940557 Granulicella + 0.00 1 0 5 3 G1 2621151 unclassified Granulicella + 0.00 1 1 2 1 S 1617967 Granulicella sp. 5B5 + 0.00 1 0 74 48 P 40117 Nitrospirae + 0.00 1 0 47 30 C 203693 Nitrospira + 0.00 1 0 47 30 O 189778 Nitrospirales + 0.00 1 0 47 30 F 189779 Nitrospiraceae + 0.00 1 0 15 13 G 1234 Nitrospira + 0.00 1 1 5 4 S 1325564 Nitrospira japonica + 0.00 485 0 134390 26849 D 2759 Eukaryota + 0.00 470 1 127350 26336 D1 33154 Opisthokonta + 0.00 363 0 123255 24505 K 33208 Metazoa + 0.00 363 0 123255 24505 K1 6072 Eumetazoa + 0.00 363 0 123255 24505 K2 33213 Bilateria + 0.00 363 0 123255 24505 K3 33511 Deuterostomia + 0.00 363 0 123255 24505 P 7711 Chordata + 0.00 363 0 123255 24505 P1 89593 Craniata + 0.00 363 0 123255 24505 P2 7742 Vertebrata + 0.00 363 0 123255 24505 P3 7776 Gnathostomata + 0.00 363 0 123255 24505 P4 117570 Teleostomi + 0.00 363 0 123255 24505 P5 117571 Euteleostomi + 0.00 363 0 123255 24505 P6 8287 Sarcopterygii + 0.00 363 0 123255 24505 P7 1338369 Dipnotetrapodomorpha + 0.00 363 0 123255 24505 P8 32523 Tetrapoda + 0.00 363 0 123255 24505 P9 32524 Amniota + 0.00 363 0 123255 24505 C 40674 Mammalia + 0.00 363 0 123255 24505 C1 32525 Theria + 0.00 363 0 123255 24505 C2 9347 Eutheria + 0.00 363 0 123255 24505 C3 1437010 Boreoeutheria + 0.00 363 0 123255 24505 C4 314146 Euarchontoglires + 0.00 363 0 123255 24505 O 9443 Primates + 0.00 363 0 123255 24505 O1 376913 Haplorrhini + 0.00 363 0 123255 24505 O2 314293 Simiiformes + 0.00 363 0 123255 24505 O3 9526 Catarrhini + 0.00 363 0 123255 24505 O4 314295 Hominoidea + 0.00 363 0 123255 24505 F 9604 Hominidae + 0.00 363 0 123255 24505 F1 207598 Homininae + 0.00 363 0 123255 24505 G 9605 Homo + 0.00 363 363 123255 24505 S 9606 Homo sapiens + 0.00 106 0 4083 1829 K 4751 Fungi + 0.00 106 2 4068 1823 K1 451864 Dikarya + 0.00 63 2 3064 1045 P 4890 Ascomycota + 0.00 61 3 3030 1021 P1 716545 saccharomyceta + 0.00 42 0 2092 672 P2 147537 Saccharomycotina + 0.00 42 0 2092 672 C 4891 Saccharomycetes + 0.00 42 2 2092 672 O 4892 Saccharomycetales + 0.00 21 3 1792 445 F 4893 Saccharomycetaceae + 0.00 7 0 1546 267 G 4930 Saccharomyces + 0.00 6 0 245 229 S 4932 Saccharomyces cerevisiae + 0.00 6 6 245 229 S1 559292 Saccharomyces cerevisiae S288C + 0.00 1 1 8 8 S 1080349 Saccharomyces eubayanus + 0.00 5 0 33 24 G 4910 Kluyveromyces + 0.00 4 4 20 13 S 28985 Kluyveromyces lactis + 0.00 1 0 13 11 S 4911 Kluyveromyces marxianus + 0.00 1 1 13 11 S1 1003335 Kluyveromyces marxianus DMKU3-1042 + 0.00 3 0 11 7 G 1196389 Zygotorulaspora + 0.00 3 3 11 7 S 42260 Zygotorulaspora mrakii + 0.00 1 0 17 12 G 4948 Torulaspora + 0.00 1 1 14 10 S 4950 Torulaspora delbrueckii + 0.00 1 0 34 22 G 71245 Kazachstania + 0.00 1 0 12 7 S 588726 Kazachstania naganishii + 0.00 1 1 12 7 S1 1071383 Kazachstania naganishii CBS 8797 + 0.00 1 0 43 28 G 113604 Tetrapisispora + 0.00 1 0 25 12 S 1071379 Tetrapisispora blattae + 0.00 1 1 25 12 S1 1071380 Tetrapisispora blattae CBS 6284 + 0.00 6 0 122 89 O1 2916678 CUG-Ser1 clade + 0.00 6 0 122 89 F 766764 Debaryomycetaceae + 0.00 6 0 78 58 F1 1535325 Candida/Lodderomyces clade + 0.00 6 0 78 58 G 1535326 Candida + 0.00 6 0 29 21 S 273371 Candida orthopsilosis + 0.00 6 6 29 21 S1 1136231 Candida orthopsilosis Co 90-125 + 0.00 4 0 17 10 F 115784 Phaffomycetaceae + 0.00 4 0 17 10 G 460517 Komagataella + 0.00 4 0 17 10 S 460519 Komagataella phaffii + 0.00 4 4 17 10 S1 644223 Komagataella phaffii GS115 + 0.00 4 0 35 31 F 410830 Trichomonascaceae + 0.00 4 0 35 31 G 410829 Sugiyamaella + 0.00 4 4 35 31 S 796027 Sugiyamaella lignohabitans + 0.00 3 1 64 51 F 1156497 Pichiaceae + 0.00 2 0 40 30 G 13366 Brettanomyces + 0.00 2 2 24 20 S 13502 Brettanomyces nanus + 0.00 1 0 18 15 F 34353 Dipodascaceae + 0.00 1 0 18 15 G 4951 Yarrowia + 0.00 1 0 18 15 S 4952 Yarrowia lipolytica + 0.00 1 1 18 15 S1 284591 Yarrowia lipolytica CLIB122 + 0.00 1 0 17 12 F 34365 Saccharomycodaceae + 0.00 1 0 17 12 G 36034 Saccharomycodes + 0.00 1 1 17 12 S 36035 Saccharomycodes ludwigii + 0.00 16 0 911 328 P2 147538 Pezizomycotina + 0.00 16 0 911 328 P3 716546 leotiomyceta + 0.00 12 0 786 228 P4 715989 sordariomyceta + 0.00 12 0 294 204 C 147550 Sordariomycetes + 0.00 6 0 177 128 C1 222543 Hypocreomycetidae + 0.00 6 0 166 120 O 5125 Hypocreales + 0.00 6 0 128 93 F 110618 Nectriaceae + 0.00 6 2 128 93 G 5506 Fusarium + 0.00 2 0 14 12 G1 171627 Fusarium fujikuroi species complex + 0.00 2 0 8 7 S 117187 Fusarium verticillioides + 0.00 2 2 8 7 S1 334819 Fusarium verticillioides 7600 + 0.00 1 0 19 16 G1 171631 Fusarium oxysporum species complex + 0.00 1 0 19 16 S 5507 Fusarium oxysporum + 0.00 1 0 19 16 S1 59765 Fusarium oxysporum f. sp. lycopersici + 0.00 1 1 19 16 S2 426428 Fusarium oxysporum f. sp. lycopersici 4287 + 0.00 1 0 70 45 G1 569360 Fusarium sambucinum species complex + 0.00 1 0 12 9 S 101028 Fusarium pseudograminearum + 0.00 1 1 12 9 S1 1028729 Fusarium pseudograminearum CS3096 + 0.00 6 0 99 71 C1 222544 Sordariomycetidae + 0.00 6 0 60 39 O 5139 Sordariales + 0.00 6 0 47 28 F 5148 Sordariaceae + 0.00 6 0 47 28 G 5140 Neurospora + 0.00 6 0 47 28 S 5141 Neurospora crassa + 0.00 6 6 47 28 S1 367110 Neurospora crassa OR74A + 0.00 4 0 92 75 C 147545 Eurotiomycetes + 0.00 4 0 92 75 C1 451871 Eurotiomycetidae + 0.00 4 0 92 75 O 5042 Eurotiales + 0.00 2 0 17 14 F 28568 Trichocomaceae + 0.00 2 0 17 14 G 5094 Talaromyces + 0.00 2 0 17 14 G1 2752542 Talaromyces sect. Islandici + 0.00 2 2 17 14 S 121627 Talaromyces rugulosus + 0.00 2 0 73 60 F 1131492 Aspergillaceae + 0.00 2 0 73 60 G 5052 Aspergillus + 0.00 1 1 24 19 S 1069201 Aspergillus luchuensis + 0.00 1 0 11 11 G1 2720872 Aspergillus subgen. Fumigati + 0.00 1 0 11 11 S 746128 Aspergillus fumigatus + 0.00 1 1 11 11 S1 330879 Aspergillus fumigatus Af293 + 0.00 41 0 970 757 P 5204 Basidiomycota + 0.00 31 0 874 701 P1 452284 Ustilaginomycotina + 0.00 20 0 826 680 C 1538075 Malasseziomycetes + 0.00 20 0 826 680 O 162474 Malasseziales + 0.00 20 0 826 680 F 742845 Malasseziaceae + 0.00 20 0 826 680 G 55193 Malassezia + 0.00 20 20 826 680 S 76775 Malassezia restricta + 0.00 11 0 48 21 C 5257 Ustilaginomycetes + 0.00 11 0 48 21 O 5267 Ustilaginales + 0.00 11 0 48 21 F 5268 Ustilaginaceae + 0.00 10 0 39 14 G 63265 Sporisorium + 0.00 10 10 39 14 S 280036 Sporisorium graminicola + 0.00 1 0 9 7 G 5269 Ustilago + 0.00 1 0 9 7 S 5270 Ustilago maydis + 0.00 1 1 9 7 S1 237631 Ustilago maydis 521 + 0.00 10 0 96 56 P1 5302 Agaricomycotina + 0.00 5 0 50 26 C 155616 Tremellomycetes + 0.00 5 0 50 26 O 5234 Tremellales + 0.00 5 0 50 26 F 1884633 Cryptococcaceae + 0.00 5 5 50 26 G 5206 Cryptococcus + 0.00 5 0 46 30 C 155619 Agaricomycetes + 0.00 5 0 26 16 C1 452333 Agaricomycetidae + 0.00 5 0 26 16 O 5338 Agaricales + 0.00 5 0 26 16 F 654128 Marasmiaceae + 0.00 5 0 26 16 G 34448 Marasmius + 0.00 5 5 26 16 S 181124 Marasmius oreades + 0.00 7 0 55 15 C 3027 Cryptophyceae + 0.00 7 0 26 9 O 589350 Cryptomonadales + 0.00 5 0 21 6 F 2896 Cryptomonadaceae + 0.00 5 0 21 6 G 3030 Cryptomonas + 0.00 5 5 21 6 S 2898 Cryptomonas paramecium + 0.00 2 0 5 3 F 589351 Hemiselmidaceae + 0.00 2 0 5 3 G 77924 Hemiselmis + 0.00 2 2 5 3 S 464988 Hemiselmis andersenii + 0.00 6 0 5698 394 D1 2698737 Sar + 0.00 4 0 5664 369 D2 33630 Alveolata + 0.00 4 0 5664 369 P 5794 Apicomplexa + 0.00 2 0 5564 308 C 422676 Aconoidasida + 0.00 2 0 5504 259 O 5819 Haemosporida + 0.00 2 0 5504 259 F 1639119 Plasmodiidae + 0.00 2 0 5504 259 G 5820 Plasmodium + 0.00 1 0 1169 81 G1 418103 Plasmodium (Plasmodium) + 0.00 1 0 19 13 S 5827 Plasmodium cynomolgi + 0.00 1 1 19 13 S1 1120755 Plasmodium cynomolgi strain B + 0.00 1 0 72 45 G1 418107 Plasmodium (Laverania) + 0.00 1 1 26 13 S 880535 Plasmodium sp. gorilla clade G2 + 0.00 2 0 98 60 C 1280412 Conoidasida + 0.00 2 0 98 60 C1 5796 Coccidia + 0.00 2 0 98 60 O 75739 Eucoccidiorida + 0.00 2 0 98 60 O1 423054 Eimeriorina + 0.00 2 0 77 44 F 5809 Sarcocystidae + 0.00 1 0 27 15 G 5810 Toxoplasma + 0.00 1 0 27 15 S 5811 Toxoplasma gondii + 0.00 1 1 27 15 S1 508771 Toxoplasma gondii ME49 + 0.00 1 0 34 17 G 29175 Neospora + 0.00 1 0 34 17 S 29176 Neospora caninum + 0.00 1 1 34 17 S1 572307 Neospora caninum Liverpool + 0.00 2 0 27 24 D2 33634 Stramenopiles + 0.00 2 0 27 24 D3 2696291 Ochrophyta + 0.00 2 0 27 24 P 2836 Bacillariophyta + 0.00 2 0 11 9 C 33849 Bacillariophyceae + 0.00 2 0 11 9 C1 33850 Bacillariophycidae + 0.00 2 0 11 9 O 38748 Naviculales + 0.00 2 0 11 9 F 38749 Phaeodactylaceae + 0.00 2 0 11 9 G 2849 Phaeodactylum + 0.00 2 0 11 9 S 2850 Phaeodactylum tricornutum + 0.00 2 2 11 9 S1 556484 Phaeodactylum tricornutum CCAP 1055/1 + 0.00 1 0 63 43 D1 554915 Amoebozoa + 0.00 1 0 63 43 P 2605435 Evosea + 0.00 1 0 63 43 C 142796 Eumycetozoa + 0.00 1 0 63 43 C1 33083 Dictyostelia + 0.00 1 0 63 43 O 2058949 Dictyosteliales + 0.00 1 0 63 43 F 2058185 Dictyosteliaceae + 0.00 1 0 63 43 G 5782 Dictyostelium + 0.00 1 0 63 43 S 44689 Dictyostelium discoideum + 0.00 1 1 63 43 S1 352472 Dictyostelium discoideum AX4 + 0.00 1 0 1197 43 D1 2611352 Discoba + 0.00 1 0 1197 43 P 33682 Euglenozoa + 0.00 1 0 1197 43 C 5653 Kinetoplastea + 0.00 1 0 1197 43 C1 2704647 Metakinetoplastina + 0.00 1 0 1197 43 O 2704949 Trypanosomatida + 0.00 1 0 1197 43 F 5654 Trypanosomatidae + 0.00 1 0 1177 30 F1 1286322 Leishmaniinae + 0.00 1 1 1177 30 G 5658 Leishmania + 0.00 11 0 4589 665 D 2157 Archaea + 0.00 11 0 4325 494 P 28890 Euryarchaeota + 0.00 9 0 1463 273 P1 2283794 Methanomada group + 0.00 9 0 1407 229 C 183925 Methanobacteria + 0.00 9 0 1407 229 O 2158 Methanobacteriales + 0.00 9 0 1407 229 F 2159 Methanobacteriaceae + 0.00 9 0 1371 202 G 2172 Methanobrevibacter + 0.00 9 7 1344 182 S 2173 Methanobrevibacter smithii + 0.00 2 2 63 61 S1 420247 Methanobrevibacter smithii ATCC 35061 + 0.00 2 0 236 185 P1 2290931 Stenosarchaea group + 0.00 2 0 123 100 C 183963 Halobacteria + 0.00 2 0 48 39 O 2235 Halobacteriales + 0.00 2 0 21 20 F 1963268 Haloarculaceae + 0.00 2 0 4 3 G 146825 Halorhabdus + 0.00 2 0 2 1 S 146826 Halorhabdus utahensis + 0.00 2 2 2 1 S1 519442 Halorhabdus utahensis DSM 12940 + 0.00 12 0 3306 594 D 10239 Viruses + 0.00 12 0 1510 524 D1 2731341 Duplodnaviria + 0.00 12 0 1510 524 K 2731360 Heunggongvirae + 0.00 12 0 1495 517 P 2731618 Uroviricota + 0.00 12 0 1495 517 C 2731619 Caudoviricetes + 0.00 12 0 1495 517 O 28883 Caudovirales + 0.00 8 0 350 254 F 10744 Podoviridae + 0.00 8 0 345 251 F1 196895 unclassified Podoviridae + 0.00 8 0 345 251 F2 1978007 crAss-like viruses + 0.00 4 0 162 147 F3 2315857 environmental samples + 0.00 4 4 162 147 S 1211417 uncultured crAssphage + 0.00 3 3 45 16 S 2831617 CrAss-like virus sp. + 0.00 1 1 1 1 S 2772070 crAssphage cr110_1 + 0.00 3 0 176 152 F 10699 Siphoviridae + 0.00 1 0 18 16 F1 196894 unclassified Siphoviridae + 0.00 1 1 5 5 S 537874 Streptococcus phage PH15 + 0.00 1 1 58 58 G 2843470 Vedamuthuvirus + 0.00 1 0 64 49 G 1623303 Brussowvirus + 0.00 1 0 18 9 G1 2267560 unclassified Brussowvirus + 0.00 1 1 18 9 S 1385385 Streptococcus phage TP-778L + 0.00 1 0 59 45 F 10662 Myoviridae + 0.00 1 0 1 1 F1 857479 Peduovirinae + 0.00 1 0 1 1 G 2732988 Reginaelenavirus + 0.00 1 0 1 1 S 2734071 Reginaelenavirus rv3LV2017 + 0.00 1 1 1 1 S1 1960657 Klebsiella phage 3LV2017 + 0.00 8 0 98 44 R1 2787854 other entries + 0.00 8 6 98 44 R2 28384 other sequences + 0.00 2 0 17 11 R3 36549 plasmids + 0.00 2 2 10 6 S 2524 Plasmid pAM77