view test-data/output_intermediate.tabular @ 4:2deaada69b14 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/krakentools commit f37828f1d6b9c53cc2e7ea334ee9a2fb8dbd8711
author iuc
date Tue, 20 Jun 2023 20:04:33 +0000
parents bc508fe30940
children
line wrap: on
line source

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0	x__root	x__cellular_organisms	k__Eukaryota	x__Sar	x__Alveolata
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0	x__root	x__cellular_organisms	k__Eukaryota	x__Sar	x__Alveolata	p__Apicomplexa	c__Conoidasida	x__Coccidia
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0	x__root	x__cellular_organisms	k__Eukaryota	x__Amoebozoa	p__Evosea
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1	x__root	x__cellular_organisms	k__Bacteria
2	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	f__Clostridiaceae
1	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	f__Clostridiaceae	g__Clostridium
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1	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	f__Clostridiaceae	g__Clostridium	s__Clostridium_pasteurianum	x__Clostridium_pasteurianum_BC1
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0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	f__Lachnospiraceae
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1	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	f__Lachnospiraceae	g__Lachnoclostridium	s__[Clostridium]_hylemonae
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	f__Oscillospiraceae
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	f__Oscillospiraceae	g__Monoglobus
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0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Clostridia	o__Eubacteriales	x__Eubacteriales_incertae_sedis
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0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales	f__Bacillaceae
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales	f__Bacillaceae	g__Bacillus
2	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales	f__Bacillaceae	g__Bacillus	x__Bacillus_cereus_group
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1	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales	f__Bacillaceae	g__Halobacillus	s__Halobacillus_litoralis
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales	f__Staphylococcaceae
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales	f__Staphylococcaceae	g__Staphylococcus
1	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Bacillales	f__Staphylococcaceae	g__Staphylococcus	s__Staphylococcus_saccharolyticus
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0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Lactobacillales	f__Lactobacillaceae	g__Weissella
1	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Firmicutes	c__Bacilli	o__Lactobacillales	f__Lactobacillaceae	g__Weissella	s__Weissella_paramesenteroides
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes	c__Mollicutes
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes	c__Mollicutes	o__Mycoplasmatales
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes	c__Mollicutes	o__Mycoplasmatales	f__Mycoplasmataceae
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes	c__Mollicutes	o__Mycoplasmatales	f__Mycoplasmataceae	g__Mycoplasma
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes	c__Mollicutes	o__Mycoplasmatales	f__Mycoplasmataceae	g__Mycoplasma	x__unclassified_Mycoplasma
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0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes	o__Mycoplasmoidales	f__Metamycoplasmataceae
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	p__Tenericutes	o__Mycoplasmoidales	f__Metamycoplasmataceae	g__Metamycoplasma
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0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	x__Cyanobacteria/Melainabacteria_group
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	x__Cyanobacteria/Melainabacteria_group	p__Cyanobacteria
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	x__Cyanobacteria/Melainabacteria_group	p__Cyanobacteria	x__Oscillatoriophycideae
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	x__Cyanobacteria/Melainabacteria_group	p__Cyanobacteria	x__Oscillatoriophycideae	o__Chroococcales
0	x__root	x__cellular_organisms	k__Bacteria	x__Terrabacteria_group	x__Cyanobacteria/Melainabacteria_group	p__Cyanobacteria	x__Oscillatoriophycideae	o__Chroococcales	f__Chroococcaceae
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0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria
0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria
0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Enterobacterales
0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Enterobacterales	f__Enterobacteriaceae
0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Enterobacterales	f__Enterobacteriaceae	g__Escherichia
0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Enterobacterales	f__Enterobacteriaceae	g__Escherichia	s__Escherichia_coli
0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Enterobacterales	f__Enterobacteriaceae	g__Escherichia	s__Escherichia_coli	x__Escherichia_coli_K-12
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0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Enterobacterales	f__Enterobacteriaceae	g__Citrobacter
0	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Enterobacterales	f__Enterobacteriaceae	g__Citrobacter	x__unclassified_Citrobacter
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5	x__root	x__cellular_organisms	k__Bacteria	p__Proteobacteria	c__Gammaproteobacteria	o__Thiotrichales	f__Francisellaceae	g__Francisella	s__Francisella_halioticida
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