Mercurial > repos > iuc > last
comparison lasttrain.xml @ 1:86206f93fb13 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/last commit 67b8e5adffa4015ee60b1b4a0cd220f632ba1082"
| author | iuc |
|---|---|
| date | Wed, 22 Jul 2020 19:50:13 -0400 |
| parents | 9a7e91fc6562 |
| children | 3de2195f32c0 |
comparison
equal
deleted
inserted
replaced
| 0:9a7e91fc6562 | 1:86206f93fb13 |
|---|---|
| 1 <tool id="last_train" name="LAST-train" version="@LAST_CONDA_VERSION@+galaxy0" profile="18.01"> | 1 <tool id="last_train" name="LAST-train" version="@LAST_CONDA_VERSION@+galaxy1" profile="18.01"> |
| 2 | 2 |
| 3 <description>finds the rates (probabilities) of insertion, deletion, and substitutions between two sets of sequences.</description> | 3 <description>finds the rates (probabilities) of insertion, deletion, and substitutions between two sets of sequences.</description> |
| 4 | 4 |
| 5 <macros> | 5 <macros> |
| 6 <import>macros_last.xml</import> | 6 <import>macros_last.xml</import> |
| 50 | 50 |
| 51 ]]></command> | 51 ]]></command> |
| 52 | 52 |
| 53 <inputs> | 53 <inputs> |
| 54 <expand macro="input_db" /> | 54 <expand macro="input_db" /> |
| 55 <param name="query_fasta" type="data" format="FASTA" label="Queries input files" /> | 55 <param name="query_fasta" type="data" format="fasta,fastqsanger" label="Queries input files" /> |
| 56 <conditional name="init_options"> | 56 <conditional name="init_options"> |
| 57 <param argument="-Q" type="select" multiple="false" label="Input format"> | 57 <param argument="-Q" type="select" multiple="false" label="Query input format"> |
| 58 <option value="0" selected="true">Fasta or fastq-ignore</option> | 58 <option value="0" selected="true">FASTA</option> |
| 59 <option value="1">Fastq-sanger</option> | 59 <option value="1">Fastq-sanger</option> |
| 60 </param> | 60 </param> |
| 61 <when value="0"> | 61 <when value="0"> |
| 62 <param argument="-r" type="integer" value="5" label="Match score"/> | 62 <param argument="-r" type="integer" value="5" label="Match score"/> |
| 63 <param argument="-q" type="integer" value="5" label="Mismatch cost"/> | 63 <param argument="-q" type="integer" value="5" label="Mismatch cost"/> |