Mercurial > repos > iuc > last
comparison test-data/last_split.maf @ 4:8705e0d74a0f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/last commit 6b601baaf89634bc8d110ea06e3e64c7a585f3ba"
author | iuc |
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date | Wed, 24 Mar 2021 22:36:50 +0000 |
parents | 9a7e91fc6562 |
children |
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3:3de2195f32c0 | 4:8705e0d74a0f |
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1 # LAST version 1021 | 1 # LAST version 1205 |
2 # | 2 # |
3 # a=7 b=1 A=7 B=1 e=22 d=13 x=21 y=9 z=21 D=1e+06 | 3 # a=7 b=1 A=7 B=1 e=22 d=13 x=21 y=9 z=21 D=1e+06 |
4 # R=10 u=0 s=2 S=0 M=0 T=0 m=10 l=1 L=999999999 n=10 k=1 w=1000 t=2.82533 j=3 Q=0 | 4 # R=10 u=0 s=2 S=0 M=0 T=0 m=10 l=1 L=999999999 n=10 k=1 w=1000 t=2.82533 j=3 Q=0 |
5 # ref_db | 5 # /home/berntm/.planemo/planemo_tmp_3z8peizh/test-data/humdb |
6 # Reference sequences=1 normal letters=16571 | 6 # Reference sequences=1 normal letters=16571 |
7 # | 7 # |
8 # A R N D C Q E G H I L K M F P S T W Y V B J Z X * | 8 # A R N D C Q E G H I L K M F P S T W Y V B J Z X * |
9 # A 5 -2 -2 -2 -1 -1 -1 0 -2 -2 -2 -1 -1 -3 -1 1 0 -3 -2 0 -2 -2 -1 -1 -6 | 9 # A 5 -2 -2 -2 -1 -1 -1 0 -2 -2 -2 -1 -1 -3 -1 1 0 -3 -2 0 -2 -2 -1 -1 -6 |
10 # R -2 6 -1 -2 -4 1 -1 -3 0 -3 -3 2 -2 -4 -2 -1 -1 -4 -3 -3 -1 -3 0 -1 -6 | 10 # R -2 6 -1 -2 -4 1 -1 -3 0 -3 -3 2 -2 -4 -2 -1 -1 -4 -3 -3 -1 -3 0 -1 -6 |
87 a score=564 mismap=0.000243 acc=AG don=GC | 87 a score=564 mismap=0.000243 acc=AG don=GC |
88 s humanMito 94 223 + 16571 ACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCT---TTGATTCCTGCCTCATTCTATTATTTATCGCACCTACGTTCAATATTACAGGCGAACATACCTACTAAAGTGTGTTAATta-attaaTGCT-TGTAGGACATAATAATAACAATTGAATGTCTGCA--CAGCCGCTTTCCACACAGACATCATAACAaaaaatttccac-caaacccccccctcccccc | 88 s humanMito 94 223 + 16571 ACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCT---TTGATTCCTGCCTCATTCTATTATTTATCGCACCTACGTTCAATATTACAGGCGAACATACCTACTAAAGTGTGTTAATta-attaaTGCT-TGTAGGACATAATAATAACAATTGAATGTCTGCA--CAGCCGCTTTCCACACAGACATCATAACAaaaaatttccac-caaacccccccctcccccc |
89 s fuguMito 16146 196 + 16447 A-----GTGC---AGCGC-----GTCAATGGTTCA-TCAAGGTTGAA-CAT---TTTTTCT-TGGTTTATGGTA---ATGTTAATTAATGAATTAAGACAT---TATTTAAG------AATTACATTACTGATATCAAGGACATAA--ATAATAATACGAT-TCAACAATCATACAATTTCAcccccttcttctttttaaaaaaatt-aacgtataccccccctacccccc | 89 s fuguMito 16146 196 + 16447 A-----GTGC---AGCGC-----GTCAATGGTTCA-TCAAGGTTGAA-CAT---TTTTTCT-TGGTTTATGGTA---ATGTTAATTAATGAATTAAGACAT---TATTTAAG------AATTACATTACTGATATCAAGGACATAA--ATAATAATACGAT-TCAACAATCATACAATTTCAcccccttcttctttttaaaaaaatt-aacgtataccccccctacccccc |
90 p 333333336?????@@@@@@@@@@@@@@@@@@@@@@@@@@@@AAAAAABBBBBBCCDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED@@: | 90 p 333333336?????@@@@@@@@@@@@@@@@@@@@@@@@@@@@AAAAAABBBBBBCCDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED@@: |
91 | 91 |
92 a score=255 mismap=0.516 acc=AG | 92 a score=255 mismap=0.515 acc=AG |
93 s humanMito 2030 114 + 16571 ATAGAATCTTAGTTCAA-CTTTAAATTTG-CCCACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGA-AAAAACCTTGTA | 93 s humanMito 2030 114 + 16571 ATAGAATCTTAGTTCAA-CTTTAAATTTG-CCCACAGAACCCTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCTTTGGACACTAGGA-AAAAACCTTGTA |
94 s fuguMito 16342 104 + 16447 ctaAAAAATAGGAGAGACCTTTAAGTTTGAACCA-AG----CTCT----CCActt----aattaaatattcatcatattattatcatatattataatattataataatataattata | 94 s fuguMito 16342 104 + 16447 ctaAAAAATAGGAGAGACCTTTAAGTTTGAACCA-AG----CTCT----CCActt----aattaaatattcatcatattattatcatatattataatattataataatataattata |
95 p ##################################################################################################################### | 95 p ##################################################################################################################### |
96 | 96 |