Mercurial > repos > iuc > last
diff test-data/last_align_prot.maf @ 4:8705e0d74a0f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/last commit 6b601baaf89634bc8d110ea06e3e64c7a585f3ba"
author | iuc |
---|---|
date | Wed, 24 Mar 2021 22:36:50 +0000 |
parents | 9a7e91fc6562 |
children | f5a5a2b39ff2 |
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--- a/test-data/last_align_prot.maf Fri Nov 13 09:05:49 2020 +0000 +++ b/test-data/last_align_prot.maf Wed Mar 24 22:36:50 2021 +0000 @@ -1,8 +1,8 @@ -# LAST version 1021 +# LAST version 1205 # # a=11 b=2 A=11 B=2 e=22 d=13 x=21 y=9 z=21 D=1e+06 E=2.73494e+09 # R=10 u=0 s=1 S=0 M=0 T=0 m=10 l=1 L=999999999 n=10 k=1 w=1000 t=3.08611 j=3 Q=0 -# ref_db +# /home/berntm/.planemo/planemo_tmp_y1t9frxe/test-data/hedgdb # Reference sequences=1 normal letters=411 # lambda=0.305935 K=0.102404 # @@ -39,28 +39,4 @@ # name start alnSize strand seqSize alignment # # batch 0 -a score=729 EG2=1.4e-80 E=1.2e-101 -s NP_002172.2 13 264 + 411 LVLLLLLVVPA----AWGCGPGRVVGSRRRPPRKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDRLNSLAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWVYYESKAHVHCSVKSEHSAAAKTGGCFPAGAQVRLESGARVALSAVRPGDRVLAMGEDGSPTFSDVLIFLDREPHRLRAFQVIETQDPPRRLALTPAHLL -s NP_001034065.1 66 265 + 471 LVALLLIVLPMVFSPAHSCGPGRGLGRHRA--RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVPNYNRDILFRDEEGTGADRLMSKRCKEKLNVLAYSVMNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSISSHVHGCFTPESTALLESGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHT-DGGAVLTVTPAHLV - -a score=131 EG2=0.4 E=4.1e-14 -s NP_002172.2 293 95 + 411 FASHVQPGQYVLVAGVPG--LQPARVAAVSTHVALGAYAPLTKHGTLVVEDVVASCFAAVADHHLAQLAFWPLRLFHSLAWGSWTPG-EGVHWYPQLL -s NP_001034065.1 344 96 + 471 FADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLE--AWLPAKEQLHSSPKVV - -a score=41 EG2=3.7e+11 E=0.06 -s NP_002172.2 91 34 + 411 KDEENTGADRLMTQRCKDRLNSLAISVMNQWPGV -s NP_001034065.1 44 34 + 471 QEETQTMRHIAHTQRCLSRLTSLVALLLIVLPMV - -a score=30 EG2=1.1e+13 E=1.8 -s NP_002172.2 180 18 + 411 ESKAHVHCSVKSEHSAAA -s NP_001034065.1 20 18 + 471 DAKCHSSSSSSSSKSAAS - -a score=24 EG2=6.6e+13 E=12 -s NP_002172.2 26 23 + 411 GCGPGRVVGSRRRPPRKLVPLAY -s NP_001034065.1 150 21 + 471 GTGADRLMSKRCK--EKLNVLAY - -a score=24 EG2=6.6e+13 E=12 -s NP_002172.2 106 27 + 411 CKDRLNSLAISVMNQWPGVKLRVTEGW -s NP_001034065.1 399 27 + 471 CYAVINSQSLAHWGLAPMRLLSTLEAW - # Query sequences=1