comparison lexicmap-index.xml @ 5:f0e5afff062b draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/lexicmap commit 45c03ff07e2d5bba1d490a67434347ec17eb30f4

4:feedc23590ad

    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements"/>

    <command detect_errors="exit_code"><![CDATA[

echo '$input_genomes' | sed 's/,/\n/g' > fasta_list.tsv &&
mkdir '$lexicmap_index.extra_files_path' &&
lexicmap index 

    --threads "\${GALAXY_SLOTS:-1}"

5:f0e5afff062b

    </macros>
    <expand macro="bio_tools"/>
    <expand macro="requirements"/>

    <command detect_errors="exit_code"><![CDATA[
set -eu;
echo '$input_genomes' | sed 's/,/\n/g' > fasta_list.tsv &&
mkdir '$lexicmap_index.extra_files_path' &&
lexicmap index 

    --threads "\${GALAXY_SLOTS:-1}"