Mercurial > repos > iuc > lineagespot
view test-data/test-constellations/definitions/cB.1.351.json @ 1:99494998688a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/lineagespot commit 6a6a37f2574954dae65f9ec407fe38594ed37659
author | iuc |
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date | Sun, 25 Feb 2024 09:49:20 +0000 |
parents | 6ddf5a9ce4a5 |
children |
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{ "label": "Beta (B.1.351-like)", "description": "Defining of lineage B.1.351", "sources": [ "https://www.medrxiv.org/content/10.1101/2020.12.21.20248640v1" ], "type": "variant", "variant": { "Pango_lineages": [ "B.1.351" ], "mrca_lineage": "B.1.351", "PHE_label": "VOC-20DEC-02", "WHO_label": "Beta", "representative_genome": "" }, "tags": [ "B.1.351", "VOC-20DEC-02", "VOC202012/02", "Beta", "501.V2", "20H", "GH" ], "sites": [ "NSP2:T85I", "ORF1ab:K1655N", "ORF1ab:K3353R", "S:D80A", "S:D215G", "S:E484K", "S:N501Y", "S:A701V", "ORF3a:Q57H", "ORF3a:S171L", "E:P71L", "N:T205I", "del:22280:9", "del:11287:9" ], "rules": { "min_alt": 6, "max_ref": 3 } }