view test-data/site_proba.csv @ 0:40f186d91e67 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/m6anet commit cfa942e434b3c39e70c06cf4968e5472f5a1ce92
author iuc
date Wed, 25 Oct 2023 07:12:45 +0000
parents
children
line wrap: on
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transcript_id,transcript_position,n_reads,probability_modified,kmer,mod_ratio
ENST00000393394.5,130,662,0.2202581316232681,GGACT,0.0981873111782477
ENST00000393394.5,234,441,0.2501963078975677,GGACT,0.0907029478458050
ENST00000222329.8,2631,23,0.3567893207073212,GGACT,0.1304347826086956
ENST00000523944.5,3348,30,0.5557191371917725,GGACT,0.2333333333333333
ENST00000262105.6,2540,20,0.3931991159915924,GGACT,0.2000000000000000
ENST00000262105.6,3426,29,0.6103772521018982,GGACT,0.2068965517241379
ENST00000394670.8,2043,41,0.7260062098503113,GGACT,0.3658536585365854
ENST00000499810.6,1901,90,0.9853399395942688,GGACT,0.9222222222222223
ENST00000499810.6,2750,24,0.2590899467468262,GGACT,0.1250000000000000
ENST00000499810.6,3008,37,0.7827798128128052,GGACT,0.5135135135135135
ENST00000373365.4,723,130,0.9848441481590271,GGACT,0.7692307692307693
ENST00000373365.4,1205,76,0.6978975534439087,GGACT,0.2894736842105263
ENST00000380668.9,2071,23,0.4891549348831177,GGACT,0.2173913043478261
ENST00000265748.6,3272,20,0.4029413163661957,GGACT,0.1000000000000000
ENST00000368097.8,1308,49,0.4595046341419220,GGACT,0.2448979591836735
ENST00000311922.3,273,36,0.9890720844268799,GGACT,0.9166666666666666
ENST00000311922.3,352,31,0.9165738224983215,GGACT,0.5161290322580645
ENST00000311922.3,546,31,0.9603326916694641,GGACT,0.8709677419354839
ENST00000311922.3,754,31,0.5318874716758728,GGACT,0.2580645161290323
ENST00000311922.3,1069,40,0.9072993993759155,GGACT,0.6750000000000000
ENST00000311922.3,3406,89,0.9774743914604187,GGACT,0.8089887640449438
ENST00000311922.3,3498,40,0.9874091744422913,GGACT,0.7750000000000000
ENST00000338825.4,330,65,0.1943143606185913,GGACT,0.0923076923076923
ENST00000296412.12,838,65,0.4225453138351440,GGACT,0.1384615384615385
ENST00000340384.4,368,66,0.4107578098773956,GGACT,0.1818181818181818
ENST00000340384.4,488,108,0.8754017353057861,GGACT,0.4537037037037037
ENST00000340384.4,574,104,0.9210290908813477,GGACT,0.5865384615384616
ENST00000457309.2,1885,24,0.7738892436027527,GGACT,0.4166666666666667
ENST00000298292.12,2611,25,0.9342290163040161,GGACT,0.9200000000000000
ENST00000227507.2,2241,33,0.6662369370460510,GGACT,0.2727272727272727
ENST00000227507.2,3664,108,0.9251167178153992,GGACT,0.5277777777777778
ENST00000350028.4,1595,24,0.9505048990249634,GGACT,0.6250000000000000
ENST00000374595.8,166,20,0.5066616535186768,GGACT,0.3500000000000000
ENST00000374595.8,1071,23,0.2806355655193329,GGACT,0.1304347826086956
ENST00000374595.8,1786,26,0.2028520256280899,GGACT,0.0769230769230769
ENST00000262225.7,1321,87,0.6040331125259399,GGACT,0.2413793103448276
ENST00000450253.6,2023,44,0.7291089892387390,GGACT,0.2954545454545455
ENST00000450253.6,2088,27,0.8862818479537964,GGACT,0.4814814814814815
ENST00000450253.6,2269,84,0.9864088892936707,GGACT,0.9047619047619048
ENST00000372839.7,1532,41,0.9585621356964111,GGACT,0.6097560975609756
ENST00000337392.9,558,28,0.2025025784969330,GGACT,0.0714285714285714
ENST00000352482.8,1333,26,0.9877531528472900,GGACT,0.9615384615384616
ENST00000352482.8,1395,28,0.9343129992485046,GGACT,0.5714285714285714
ENST00000340513.4,3033,42,0.9952387809753418,GGACT,1.0000000000000000
ENST00000232888.6,1374,29,0.3711816370487213,GGACT,0.1034482758620690
ENST00000258975.6,951,27,0.7738332748413086,GGACT,0.3333333333333333
ENST00000251413.7,264,40,0.6202264428138733,GGACT,0.3000000000000000
ENST00000251413.7,505,30,0.2851565778255463,GGACT,0.1333333333333333
ENST00000251413.7,1534,77,0.9868885874748230,GGACT,0.8831168831168831
ENST00000258383.3,699,20,0.6646413207054138,GGACT,0.2000000000000000
ENST00000258383.3,1316,20,0.1779935210943222,GGACT,0.0500000000000000
ENST00000367142.4,481,27,0.2336638718843460,GGACT,0.0370370370370370
ENST00000367142.4,1510,26,0.9076765775680542,GGACT,0.7307692307692307
ENST00000373062.7,1210,27,0.2000236809253693,GGACT,0.0740740740740741
ENST00000373062.7,1383,31,0.5209900736808777,GGACT,0.2580645161290323
ENST00000373062.7,1979,23,0.4619059562683105,GGACT,0.2608695652173913
ENST00000405805.5,2415,28,0.7868381142616272,GGACT,0.3571428571428572
ENST00000356000.7,1140,32,0.9578318595886230,GGACT,0.8125000000000000
ENST00000617731.2,464,185,0.1546680480241776,GGACT,0.0756756756756757
ENST00000354675.10,6112,23,0.9841457009315491,GGACT,0.7826086956521739
ENST00000367627.7,2024,33,0.9947395324707031,GGACT,0.9696969696969697
ENST00000367627.7,2048,27,0.9935660958290100,GGACT,0.8888888888888888
ENST00000519065.5,261,27,0.6987373232841492,GGACT,0.2222222222222222
ENST00000519065.5,1951,57,0.9731091856956482,GGACT,0.8596491228070176
ENST00000216129.6,1091,23,0.8455310463905334,GGACT,0.3043478260869565
ENST00000432462.6,526,37,0.7197095751762390,GGACT,0.3783783783783784
ENST00000326427.10,430,27,0.3374719619750977,GGACT,0.1111111111111111
ENST00000326427.10,453,22,0.2899298071861267,GGACT,0.2272727272727273
ENST00000368149.2,1250,21,0.5231421589851379,GGACT,0.2857142857142857
ENST00000368149.2,2112,46,0.9528524279594421,GGACT,0.6739130434782609
ENST00000368149.2,2165,32,0.9834513664245605,GGACT,0.6562500000000000
ENST00000368149.2,2737,33,0.9637023210525513,GGACT,0.6969696969696970
ENST00000254799.10,585,35,0.2712623178958893,GGACT,0.1428571428571428
ENST00000254799.10,885,61,0.2885415554046631,GGACT,0.1147540983606557
ENST00000254799.10,933,21,0.7477120161056519,GGACT,0.4285714285714285
ENST00000254799.10,965,45,0.3009000420570374,GGACT,0.1111111111111111
ENST00000254799.10,1625,53,0.7655946016311646,GGACT,0.3962264150943396
ENST00000254799.10,1721,86,0.9900733232498169,GGACT,0.8953488372093024
ENST00000215375.6,133,48,0.4071687459945679,GGACT,0.0833333333333333
ENST00000215375.6,787,53,0.9324858188629150,GGACT,0.4905660377358491
ENST00000248879.7,688,27,0.9644709825515747,GGACT,0.7037037037037037
ENST00000248879.7,889,42,0.9571337103843689,GGACT,0.6666666666666666
ENST00000335007.9,301,48,0.5563411712646484,GGACT,0.2083333333333333
ENST00000335007.9,465,77,0.8410034179687500,GGACT,0.3766233766233766
ENST00000335007.9,1190,106,0.9765372872352600,GGACT,0.7641509433962265
ENST00000373232.7,662,172,0.3497287333011627,GGACT,0.1976744186046512
ENST00000373232.7,740,126,0.2644290626049042,GGACT,0.1031746031746032
ENST00000279281.7,141,25,0.4770812094211578,GGACT,0.2400000000000000
ENST00000279281.7,1689,28,0.4453878402709961,GGACT,0.2142857142857143
ENST00000279281.7,2030,31,0.1925014108419418,GGACT,0.0967741935483871
ENST00000279281.7,2283,39,0.9835131764411926,GGACT,0.8717948717948718
ENST00000221566.6,421,20,0.4708485007286072,GGACT,0.3000000000000000
ENST00000221566.6,1188,35,0.9298388957977295,GGACT,0.6285714285714286
ENST00000470450.5,1369,48,0.3350095450878143,GGACT,0.1041666666666667
ENST00000396024.7,536,45,0.2646224200725555,GGACT,0.0888888888888889
ENST00000634960.1,965,22,0.0539428219199181,GGACT,0.0000000000000000
ENST00000634960.1,1360,24,0.6504774689674377,GGACT,0.3333333333333333
ENST00000634960.1,1394,28,0.2388863712549210,GGACT,0.0714285714285714
ENST00000634960.1,2171,29,0.2318001240491867,GGACT,0.1034482758620690
ENST00000626223.2,1417,62,0.5923939347267151,GGACT,0.1935483870967742
ENST00000626223.2,1746,38,0.9583113193511963,GGACT,0.6315789473684210