comparison macs2_predictd.xml @ 17:424aefbd7777 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/macs2 commit e90e79e18362561d0060d2c162f1938feebdbc29

16:495a4173006f

<tool id="macs2_predictd" name="MACS2 predictd" version="@VERSION_STRING@.0">
    <description>Predict 'd' or fragment size from alignment results</description>
    <macros>
        <import>macs2_macros.xml</import>
    </macros>
    <expand macro="requirements"/>

        &&

        Rscript predictd
    ]]></command>
    <inputs>
        <param name="infiles" type="data" format="bam,sam,bed" multiple="True"
               label="ChIP-seq alignment file"
               help="If multiple files are given, then they will all be read and combined. Note that pair-end data is not supposed to work with this command. (-i)" />
        <expand macro="conditional_effective_genome_size" />
        <expand macro="tag_size" />
        <expand macro="band_width" />

17:424aefbd7777

<tool id="macs2_predictd" name="MACS2 predictd" version="@VERSION_STRING@.1">
    <description>Predict 'd' or fragment size from alignment results</description>
    <macros>
        <import>macs2_macros.xml</import>
    </macros>
    <expand macro="requirements"/>

        &&

        Rscript predictd
    ]]></command>
    <inputs>
        <param name="infiles" type="data" format="bam,bed" multiple="True"
               label="ChIP-seq alignment file"
               help="If multiple files are given, then they will all be read and combined. Note that pair-end data is not supposed to work with this command. (-i)" />
        <expand macro="conditional_effective_genome_size" />
        <expand macro="tag_size" />
        <expand macro="band_width" />