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comparison mageck_macros.xml @ 4:3b22ff50a362 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mageck commit 4478aabdcb10e4787450b1b23944defa7dc38ffe
author iuc
date Mon, 04 Jun 2018 10:57:38 -0400
parents 82a180e6b582
children d46e36492bff
comparison
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3:f259c29b3832 4:3b22ff50a362
4 <token name="@VERSION@">0.5.7</token> 4 <token name="@VERSION@">0.5.7</token>
5 5
6 <xml name="requirements"> 6 <xml name="requirements">
7 <requirements> 7 <requirements>
8 <requirement type="package" version="@VERSION@">mageck</requirement> 8 <requirement type="package" version="@VERSION@">mageck</requirement>
9 <requirement type="package" version="1.14.2">numpy</requirement>
10 <requirement type="package" version="3.0.1">r-gplots</requirement> 9 <requirement type="package" version="3.0.1">r-gplots</requirement>
11 <requirement type="package" version="1.8_2">r-xtable</requirement> 10 <requirement type="package" version="1.8_2">r-xtable</requirement>
12 <yield/> 11 <yield/>
13 </requirements> 12 </requirements>
14 </xml> 13 </xml>
15 14
16 <xml name="version"> 15 <xml name="version">
17 <version_command><![CDATA[ 16 <version_command><![CDATA[
18 echo $(mageck -v )", numpy version" $([python -c "import numpy; numpy.version.version"])", gplots version" $(R --vanilla --slave -e "library(gplots); cat(sessionInfo()\$otherPkgs\$gplots\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", xtable version" $(R --vanilla --slave -e "library(xtable); cat(sessionInfo()\$otherPkgs\$xtable\$Version)" 2> /dev/null | grep -v -i "WARNING: ") 17 echo $(mageck -v )", gplots version" $(R --vanilla --slave -e "library(gplots); cat(sessionInfo()\$otherPkgs\$gplots\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", xtable version" $(R --vanilla --slave -e "library(xtable); cat(sessionInfo()\$otherPkgs\$xtable\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
19 ]]></version_command> 18 ]]></version_command>
20 </xml> 19 </xml>
21 20
22 <xml name="sort_criteria"> 21 <xml name="sort_criteria">
23 <param name="sort_criteria" argument="--sort-criteria" type="select" optional="true" label="Sorting criteria"> 22 <param name="sort_criteria" argument="--sort-criteria" type="select" optional="true" label="Sorting criteria">