# HG changeset patch
# User iuc
# Date 1518882059 18000
# Node ID 37127c23a210a121d63dedbdf2d4c129a0a478e7
# Parent  c871e57e2abbc79097d8def9687d731cd043db75
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mageck commit 2eea865fe331694058922292e5681b96f4f0b4c7

diff -r c871e57e2abb -r 37127c23a210 mageck_pathway.xml
--- a/mageck_pathway.xml	Wed Feb 14 06:41:39 2018 -0500
+++ b/mageck_pathway.xml	Sat Feb 17 10:40:59 2018 -0500
@@ -46,7 +46,7 @@
                 label="Alpha value for RRA pathway enrichment" help="The default alpha value for RRA pathway enrichment. Default: 0.25" />
             <param argument="--permutation" type="integer" min="0" value="1000" optional="true" label="Permutation number for GSEA" help="Default: 1000" />
             <param name="out_log" type="boolean" truevalue="True" falsevalue="" checked="false"
-                label="Output logfile" help="This file includes the logging information during the execution. Default: No" />
+                label="Output Log file" help="This file includes the logging information during the execution. Default: No" />
         </section>
 
     </inputs>
diff -r c871e57e2abb -r 37127c23a210 test-data/out.count.bam.txt
--- a/test-data/out.count.bam.txt	Wed Feb 14 06:41:39 2018 -0500
+++ b/test-data/out.count.bam.txt	Sat Feb 17 10:40:59 2018 -0500
@@ -1,4 +1,4 @@
-sgRNA	Gene	sample1
+sgRNA	Gene	test1.bam
 s_10007	CCNA1	0
 s_10008	CCNA1	0
 s_10027	CCNC	0
diff -r c871e57e2abb -r 37127c23a210 test-data/out.count.fastq.txt
--- a/test-data/out.count.fastq.txt	Wed Feb 14 06:41:39 2018 -0500
+++ b/test-data/out.count.fastq.txt	Sat Feb 17 10:40:59 2018 -0500
@@ -1,4 +1,4 @@
-sgRNA	Gene	sample1
+sgRNA	Gene	test1.fastq.gz
 s_47512	RNF111	1
 s_24835	HCFC1R1	1
 s_14784	CYP4B1	4