Mercurial > repos > iuc > maker
comparison test-data/annot_model.gff3 @ 5:5201ec38c01f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 5bef07276e14b38cca31ef724d0b4d2f55809715"
| author | iuc |
|---|---|
| date | Mon, 28 Dec 2020 23:19:04 +0000 |
| parents | 16e44ec438c4 |
| children |
comparison
equal
deleted
inserted
replaced
| 4:5e96efe6e6c6 | 5:5201ec38c01f |
|---|---|
| 1 ##gff-version 3 | 1 ##gff-version 3 |
| 2 HS08198 maker gene 352 1848 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0;Name=maker-HS08198-exonerate_est2genome-gene-0.0 | 2 HS08198 maker gene 99 1848 . + . ID=maker-HS08198-snap-gene-0.3;Name=maker-HS08198-snap-gene-0.3 |
| 3 HS08198 maker mRNA 352 1848 2869 + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1;Parent=maker-HS08198-exonerate_est2genome-gene-0.0;Name=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1;_AED=0.00;_eAED=0.00;_QI=70|1|1|1|0|0|7|0|192 | 3 HS08198 maker mRNA 99 1848 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1;Parent=maker-HS08198-snap-gene-0.3;Name=maker-HS08198-snap-gene-0.3-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.66|0.57|0.85|0.83|0.85|7|0|190 |
| 4 HS08198 maker exon 352 397 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:exon:9;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 4 HS08198 maker exon 99 107 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1:exon:9;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 5 HS08198 maker exon 421 582 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:exon:10;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 5 HS08198 maker exon 421 582 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1:exon:10;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 6 HS08198 maker exon 812 894 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:exon:11;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 6 HS08198 maker exon 812 874 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1:exon:11;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 7 HS08198 maker exon 1053 1123 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:exon:12;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 7 HS08198 maker exon 1072 1123 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1:exon:12;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 8 HS08198 maker exon 1208 1315 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:exon:13;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 8 HS08198 maker exon 1208 1315 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1:exon:13;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 9 HS08198 maker exon 1587 1688 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:exon:14;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 9 HS08198 maker exon 1587 1688 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1:exon:14;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 10 HS08198 maker exon 1772 1848 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:exon:15;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 10 HS08198 maker exon 1772 1848 . + . ID=maker-HS08198-snap-gene-0.3-mRNA-1:exon:15;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 11 HS08198 maker five_prime_UTR 352 397 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:five_prime_utr;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 11 HS08198 maker CDS 99 107 . + 0 ID=maker-HS08198-snap-gene-0.3-mRNA-1:cds;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 12 HS08198 maker five_prime_UTR 421 444 . + . ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:five_prime_utr;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 12 HS08198 maker CDS 421 582 . + 0 ID=maker-HS08198-snap-gene-0.3-mRNA-1:cds;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 13 HS08198 maker CDS 445 582 . + 0 ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 13 HS08198 maker CDS 812 874 . + 0 ID=maker-HS08198-snap-gene-0.3-mRNA-1:cds;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 14 HS08198 maker CDS 812 894 . + 0 ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 14 HS08198 maker CDS 1072 1123 . + 0 ID=maker-HS08198-snap-gene-0.3-mRNA-1:cds;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 15 HS08198 maker CDS 1053 1123 . + 1 ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 15 HS08198 maker CDS 1208 1315 . + 2 ID=maker-HS08198-snap-gene-0.3-mRNA-1:cds;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 16 HS08198 maker CDS 1208 1315 . + 2 ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 16 HS08198 maker CDS 1587 1688 . + 2 ID=maker-HS08198-snap-gene-0.3-mRNA-1:cds;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 17 HS08198 maker CDS 1587 1688 . + 2 ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | 17 HS08198 maker CDS 1772 1848 . + 2 ID=maker-HS08198-snap-gene-0.3-mRNA-1:cds;Parent=maker-HS08198-snap-gene-0.3-mRNA-1 |
| 18 HS08198 maker CDS 1772 1848 . + 2 ID=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS08198-exonerate_est2genome-gene-0.0-mRNA-1 | |
| 19 ### | 18 ### |
| 20 HS04636 maker gene 1813 6903 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0;Name=maker-HS04636-exonerate_est2genome-gene-0.0 | 19 HS04636 maker gene 1813 6903 . + . ID=maker-HS04636-augustus-gene-0.0;Name=maker-HS04636-augustus-gene-0.0 |
| 21 HS04636 maker mRNA 1813 6903 8728 + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1;Parent=maker-HS04636-exonerate_est2genome-gene-0.0;Name=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1;_AED=0.00;_eAED=0.00;_QI=49|1|1|1|0|0|9|0|572 | 20 HS04636 maker mRNA 1813 6903 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1;Parent=maker-HS04636-augustus-gene-0.0;Name=maker-HS04636-augustus-gene-0.0-mRNA-1;_AED=0.00;_eAED=0.00;_QI=49|1|1|1|1|1|9|0|572 |
| 22 HS04636 maker exon 1813 1934 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:0;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 21 HS04636 maker exon 1813 1934 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:0;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 23 HS04636 maker exon 2055 2198 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:1;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 22 HS04636 maker exon 2055 2198 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:1;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 24 HS04636 maker exon 2852 2995 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:2;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 23 HS04636 maker exon 2852 2995 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:2;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 25 HS04636 maker exon 3426 3607 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:3;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 24 HS04636 maker exon 3426 3607 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:3;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 26 HS04636 maker exon 4340 4423 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:4;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 25 HS04636 maker exon 4340 4423 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:4;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 27 HS04636 maker exon 4543 4789 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:5;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 26 HS04636 maker exon 4543 4789 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:5;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 28 HS04636 maker exon 5072 5358 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:6;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 27 HS04636 maker exon 5072 5358 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:6;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 29 HS04636 maker exon 5860 6007 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:7;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 28 HS04636 maker exon 5860 6007 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:7;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 30 HS04636 maker exon 6494 6903 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:exon:8;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 29 HS04636 maker exon 6494 6903 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:exon:8;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 31 HS04636 maker five_prime_UTR 1813 1861 . + . ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:five_prime_utr;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 30 HS04636 maker five_prime_UTR 1813 1861 . + . ID=maker-HS04636-augustus-gene-0.0-mRNA-1:five_prime_utr;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 32 HS04636 maker CDS 1862 1934 . + 0 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 31 HS04636 maker CDS 1862 1934 . + 0 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 33 HS04636 maker CDS 2055 2198 . + 2 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 32 HS04636 maker CDS 2055 2198 . + 2 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 34 HS04636 maker CDS 2852 2995 . + 2 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 33 HS04636 maker CDS 2852 2995 . + 2 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 35 HS04636 maker CDS 3426 3607 . + 2 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 34 HS04636 maker CDS 3426 3607 . + 2 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 36 HS04636 maker CDS 4340 4423 . + 0 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 35 HS04636 maker CDS 4340 4423 . + 0 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 37 HS04636 maker CDS 4543 4789 . + 0 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 36 HS04636 maker CDS 4543 4789 . + 0 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 38 HS04636 maker CDS 5072 5358 . + 2 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 37 HS04636 maker CDS 5072 5358 . + 2 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 39 HS04636 maker CDS 5860 6007 . + 0 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 38 HS04636 maker CDS 5860 6007 . + 0 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 40 HS04636 maker CDS 6494 6903 . + 2 ID=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-exonerate_est2genome-gene-0.0-mRNA-1 | 39 HS04636 maker CDS 6494 6903 . + 2 ID=maker-HS04636-augustus-gene-0.0-mRNA-1:cds;Parent=maker-HS04636-augustus-gene-0.0-mRNA-1 |
| 41 ### | 40 ### |