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annotate readme.rst @ 6:2e3535db1bfa draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 90ae29b39b58999e45a8f4e0bfbabc5a59047ba1"
author iuc
date Mon, 28 Jun 2021 09:39:48 +0000
parents e408aa831db3
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e408aa831db3 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 6ba137e32243a6de1fb83a7d4b88f9283db5dd01"
iuc
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1 Running with MPI
e408aa831db3 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 6ba137e32243a6de1fb83a7d4b88f9283db5dd01"
iuc
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2 ================
e408aa831db3 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 6ba137e32243a6de1fb83a7d4b88f9283db5dd01"
iuc
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3
e408aa831db3 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 6ba137e32243a6de1fb83a7d4b88f9283db5dd01"
iuc
parents:
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4 By default, Maker will only run on 1 cpu. If you want to parallelize on any number
e408aa831db3 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 6ba137e32243a6de1fb83a7d4b88f9283db5dd01"
iuc
parents:
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5 of cpus and nodes, you can enable MPI by setting the ``MAKER_MPI`` variable to 1
e408aa831db3 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 6ba137e32243a6de1fb83a7d4b88f9283db5dd01"
iuc
parents:
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6 in the job destination, and setting ``GALAXY_SLOTS`` to the desired number of cores
e408aa831db3 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maker commit 6ba137e32243a6de1fb83a7d4b88f9283db5dd01"
iuc
parents:
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7 (see https://galaxyproject.org/admin/config/galaxy_slots/#galaxy_slots-for-server-admins).