Mercurial > repos > iuc > map_damage

annotate test-data/alignment.fa @ 1:761b6fdcac6e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 1fc6a1ce5483f15ea5366a534529025781311200
author iuc
date Wed, 16 Jul 2025 08:09:11 +0000
parents 3db999d4e0c1
children
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3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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1 >minc:123214052
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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2 AGAAAAAGGA
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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3 >minc:123214052:414-495
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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4 TAGATGTGATTTTGAGCAACTGTCAGCTCTGGCTAGTGGCATGGGTTTGTATAGTCATCTGTACGCAAAAGTTGTTGTCTTT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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5 >simulated_read_1_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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6 TAGATGTGATTTTGAGCAACTGTCAGCTCTGGCTAGTGGCATGGGTTTGTATAGTCATCTGTACGCAAAAGTTATTGTCTTT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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7 >minc:123214052
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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8 AGTAAGGTCC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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9 >minc:123214052
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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10 TGAGAAGATT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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11 >minc:123214052:1173-1233
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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12 ACTGGTTGATAGAAATTTGAAAGGTGTAACTCATGTTATTGTTGATGAGATTCATGAGCGT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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13 >simulated_read_2_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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14 ATTGGTTGATAGAAATTTGAAAGGTGTAACTCATGTTATTGTTGATGAGATTCATGAACAT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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15 >minc:123214052
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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16 GGAATGAATG
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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17 >minc:123214052
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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18 GAGGGAAGAT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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19 >minc:123214052:3161-3236
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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20 TTGTATTTGGTCGCCAGGTGCTTAAGTCGCTTAAGTCTTCACCTGTGCCATTACAGCCAGCTTTGATTCCACGGAC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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21 >simulated_read_3_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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22 TTGTATTTGGTCGCCAGGTGCTTAAGTCGCTTAAGTCTTCACCTGTGCCATTACAGCCAGCTTTGATTCCACAGAC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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23 >minc:123214052
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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24 AGAGAGCGGA
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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25 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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26 GGGAGAGAAT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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27 >minc:123224581:211-282
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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28 TTGCAAGCTTTGTGGAGCCCTGATGGAAAATTGATCGCTGTGATTACGTCATCTTTTTTTCTTCACATTTTC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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29 >simulated_read_4_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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30 TTGTAAGCTTTGTGGAGCCCTGATGGAAAATTGATCGCTGTGATTACGTCATCTTTTTTTCTTCACATTTTC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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31 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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32 AAGGTCCAGT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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33 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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34 AGAAAAGGGT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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35 >minc:123224581:397-472
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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36 TTTTCAGTGAGCAATATTGTGAGCGATAACAAACATATGCTACTTGGACTTTCTGATGGATCTTTATATTGTATCT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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37 >simulated_read_5_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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38 TTTTTAGTGAGTAATATTGTGAGCGATAACAAACATATGCTACTTGGACTTTCTGATAGATCTTTATATTGTATCT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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39 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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40 CATGGAAGGG
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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41 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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42 AAGAGCTGGG
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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43 >minc:123224581:765-825
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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44 TTCTGGTGATGTTGTATGTGCTTCAGTGGCGGCAGAGCAACAAATTGTTGCTGTTGGCACC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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45 >simulated_read_6_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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46 TTTTGGTGATGTTGTATGTGCTTCAGTGGCGGCAGAGCAACAAATTGTTGCTATTGACACC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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47 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
iuc
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48 AGAAGGGGGA
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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49 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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50 GAAGATAGGT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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51 >minc:123224581:1277-1351
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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52 TATTAGTTGTGCAGTCTGAAGATACTGATGAACTTAAGCTTTTACATTTAAACCTTCCAGTTTCTTATATCTCCC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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53 >simulated_read_7_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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54 TATTAGTTGTGCAGTTTGAAGATACTGATGAACTTAAGCTTTTACATTTAAACCTTCCAGTTTCTTATATCTCCC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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55 >minc:123224581
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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56 AGAATTGGCC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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57 >minc:123230223
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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58 CAGAAGGAGA
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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59 >minc:123230223:288-341
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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60 TATTGTGATACCATATTTTCTGGCAGATTGTAGTGAATGTGTCGATTGCAAGTC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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61 >simulated_read_8_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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62 TATTGTGATATCATATTTTCTGGCAGATTGTAGTGAATGTGTCGATTGCAAATC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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63 >minc:123230223
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64 AAAGAAGAGC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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65 >minc:123230223
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66 GAGGTGCAGA
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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67 >minc:123230223:822-880
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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68 TTACTGCTTTGAGTGTGTTGGTTCTTCATCCTTGGTGCAAGAAGCGTATGCTTGCTGTC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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69 >simulated_read_9_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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70 TTATTGTTTTGAGTGTGTTGGTTCTTCATCCTTGGTGCAAAAAGCGTATGCTTACTATC
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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71 >minc:123230223
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72 GAAAGGGATG
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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73 >minc:123230223
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74 CTAAAACTGA
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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75 >minc:123230223:1017-1080
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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76 CATTCCAATTCTGCTGAAACGTTACATGGACAAGGAATTACAATTAGATGAATTTGTGACACAT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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77 >simulated_read_10_+
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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78 TATTCTAATTCTGCTGAAACGTTACATGGACAAGGAATTACAATTAGATGAATTTGTAACACAT
3db999d4e0c1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/map_damage commit 3b5fcf457cea50698cc333239669bf25f6031ab5
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79 >minc:123230223
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80 GAGATGAAGT