diff test-data/mapseq_db/LSU_trimmed.fasta @ 0:a09139ba9c06 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mapseq commit d65dcf8e74424115ec9277df10ba7ed1fbb4feb2
author iuc
date Wed, 13 Sep 2023 20:02:22 +0000
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/mapseq_db/LSU_trimmed.fasta	Wed Sep 13 20:02:22 2023 +0000
@@ -0,0 +1,151 @@
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