Mercurial > repos > iuc > medaka_consensus_pipeline
comparison macros.xml @ 15:79e9a869f40e draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit 4d3dfd4bcb567178107dcfd808ff03f9fec0bdbd
| author | iuc |
|---|---|
| date | Wed, 12 Oct 2022 07:44:40 +0000 |
| parents | cb34f00cc10f |
| children | fc8804320156 |
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| 14:cb34f00cc10f | 15:79e9a869f40e |
|---|---|
| 1 <macros> | 1 <macros> |
| 2 <token name="@TOOL_VERSION@">1.4.4</token> | 2 <token name="@TOOL_VERSION@">1.7.2</token> |
| 3 <token name="@VERSION_SUFFIX@">1</token> | 3 <token name="@VERSION_SUFFIX@">0</token> |
| 4 <token name="@PROFILE@">21.01</token> | 4 <token name="@PROFILE@">21.01</token> |
| 5 <xml name="bio_tools"> | 5 <xml name="bio_tools"> |
| 6 <xrefs> | 6 <xrefs> |
| 7 <xref type="bio.tools">medaka</xref> | 7 <xref type="bio.tools">medaka</xref> |
| 8 </xrefs> | 8 </xrefs> |
| 67 <option value="r103_prom_snp_g3210">r103_prom_snp_g3210</option> | 67 <option value="r103_prom_snp_g3210">r103_prom_snp_g3210</option> |
| 68 <option value="r103_prom_variant_g3210">r103_prom_variant_g3210</option> | 68 <option value="r103_prom_variant_g3210">r103_prom_variant_g3210</option> |
| 69 <option value="r103_sup_g507">r103_sup_g507</option> | 69 <option value="r103_sup_g507">r103_sup_g507</option> |
| 70 <option value="r103_sup_snp_g507">r103_sup_snp_g507</option> | 70 <option value="r103_sup_snp_g507">r103_sup_snp_g507</option> |
| 71 <option value="r103_sup_variant_g507">r103_sup_variant_g507</option> | 71 <option value="r103_sup_variant_g507">r103_sup_variant_g507</option> |
| 72 <option value="r1041_e82_400bps_fast_g615">r1041_e82_400bps_fast_g615</option> | |
| 73 <option value="r1041_e82_400bps_fast_variant_g615">r1041_e82_400bps_fast_variant_g615</option> | |
| 74 <option value="r1041_e82_400bps_hac_g615">r1041_e82_400bps_hac_g615</option> | |
| 75 <option value="r1041_e82_400bps_hac_variant_g615">r1041_e82_400bps_hac_variant_g615</option> | |
| 76 <option value="r1041_e82_400bps_sup_g615">r1041_e82_400bps_sup_g615</option> | |
| 77 <option value="r1041_e82_400bps_sup_variant_g615">r1041_e82_400bps_sup_variant_g615</option> | |
| 72 <option value="r104_e81_fast_g5015">r104_e81_fast_g5015</option> | 78 <option value="r104_e81_fast_g5015">r104_e81_fast_g5015</option> |
| 73 <option value="r104_e81_hac_g5015">r104_e81_hac_g5015</option> | 79 <option value="r104_e81_hac_g5015">r104_e81_hac_g5015</option> |
| 74 <option value="r104_e81_sup_g5015">r104_e81_sup_g5015</option> | 80 <option value="r104_e81_sup_g5015">r104_e81_sup_g5015</option> |
| 81 <option value="r104_e81_fast_variant_g5015">r104_e81_fast_variant_g5015</option> | |
| 82 <option value="r104_e81_hac_variant_g5015">r104_e81_hac_variant_g5015</option> | |
| 83 <option value="r104_e81_sup_g610">r104_e81_sup_g610</option> | |
| 84 <option value="r104_e81_sup_variant_g610">r104_e81_sup_variant_g610</option> | |
| 75 <option value="r10_min_high_g303">r10_min_high_g303</option> | 85 <option value="r10_min_high_g303">r10_min_high_g303</option> |
| 76 <option value="r10_min_high_g340">r10_min_high_g340</option> | 86 <option value="r10_min_high_g340">r10_min_high_g340</option> |
| 87 <option value="r941_e81_fast_variant_g514">r941_e81_fast_variant_g514</option> | |
| 88 <option value="r941_e81_hac_g514">r941_e81_hac_g514</option> | |
| 89 <option value="r941_e81_hac_variant_g514">r941_e81_hac_variant_g514</option> | |
| 90 <option value="r941_e81_sup_g514">r941_e81_sup_g514</option> | |
| 91 <option value="r941_e81_sup_variant_g514">r941_e81_sup_variant_g514</option> | |
| 77 <option value="r941_min_fast_g303">r941_min_fast_g303</option> | 92 <option value="r941_min_fast_g303">r941_min_fast_g303</option> |
| 78 <option value="r941_min_fast_g507">r941_min_fast_g507</option> | 93 <option value="r941_min_fast_g507">r941_min_fast_g507</option> |
| 79 <option value="r941_min_fast_snp_g507">r941_min_fast_snp_g507</option> | 94 <option value="r941_min_fast_snp_g507">r941_min_fast_snp_g507</option> |
| 80 <option value="r941_min_fast_variant_g507">r941_min_fast_variant_g507</option> | 95 <option value="r941_min_fast_variant_g507">r941_min_fast_variant_g507</option> |
| 81 <option value="r941_min_hac_g507">r941_min_hac_g507</option> | 96 <option value="r941_min_hac_g507">r941_min_hac_g507</option> |
| 109 <option value="r941_prom_sup_snp_g507">r941_prom_sup_snp_g507</option> | 124 <option value="r941_prom_sup_snp_g507">r941_prom_sup_snp_g507</option> |
| 110 <option value="r941_prom_sup_variant_g507">r941_prom_sup_variant_g507</option> | 125 <option value="r941_prom_sup_variant_g507">r941_prom_sup_variant_g507</option> |
| 111 <option value="r941_prom_variant_g303">r941_prom_variant_g303</option> | 126 <option value="r941_prom_variant_g303">r941_prom_variant_g303</option> |
| 112 <option value="r941_prom_variant_g322">r941_prom_variant_g322</option> | 127 <option value="r941_prom_variant_g322">r941_prom_variant_g322</option> |
| 113 <option value="r941_prom_variant_g360">r941_prom_variant_g360</option> | 128 <option value="r941_prom_variant_g360">r941_prom_variant_g360</option> |
| 129 <option value="r941_sup_plant_g610">r941_sup_plant_g610</option> | |
| 130 <option value="r941_sup_plant_variant_g610">r941_sup_plant_variant_g610</option> | |
| 114 </param> | 131 </param> |
| 115 </xml> | 132 </xml> |
| 116 <xml name="reference"> | 133 <xml name="reference"> |
| 117 <conditional name="reference_source"> | 134 <conditional name="reference_source"> |
| 118 <param name="reference_source_selector" type="select" label="Choose the source for the reference genome"> | 135 <param name="reference_source_selector" type="select" label="Choose the source for the reference genome"> |