comparison macros.xml @ 14:cb34f00cc10f draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit 8051b858e0f5c6d7c1092754df02ed8303a53054

13:72b5e9dda577

<macros>
    <token name="@TOOL_VERSION@">1.4.4</token>
    <token name="@VERSION_SUFFIX@">0</token>
    <token name="@PROFILE@">20.01</token>
    <xml name="bio_tools">
        <xrefs>
            <xref type="bio.tools">medaka</xref>
        </xrefs>
    </xml>

r941_prom_hac_g303 should be used with PromethION data and the high accuracy basecaller (termed "hac" in Guppy configuration files). Where a version of Guppy has been used without an exactly corresponding medaka model, the medaka model with the highest version equal to or less than the guppy version should be selected.
          
    ]]></token>

    <token name="@REFERENCES@"><![CDATA[
More information are available in the `manual <https://nanoporetech.github.io/medaka/index.html>`_ and `github <https://github.com/nanoporetech/medaka>`_.
    ]]></token>
</macros>

14:cb34f00cc10f

<macros>
    <token name="@TOOL_VERSION@">1.4.4</token>
    <token name="@VERSION_SUFFIX@">1</token>
    <token name="@PROFILE@">21.01</token>
    <xml name="bio_tools">
        <xrefs>
            <xref type="bio.tools">medaka</xref>
        </xrefs>
    </xml>

r941_prom_hac_g303 should be used with PromethION data and the high accuracy basecaller (termed "hac" in Guppy configuration files). Where a version of Guppy has been used without an exactly corresponding medaka model, the medaka model with the highest version equal to or less than the guppy version should be selected.
          
    ]]></token>

    <token name="@REFERENCES@"><![CDATA[
More information are available in the `manual <https://github.com/nanoporetech/medaka/tree/master/docs>`_ and `github <https://github.com/nanoporetech/medaka>`_.
    ]]></token>
</macros>