Mercurial > repos > iuc > meme_dreme
comparison test-data/fimo_output_test3.xml @ 5:f33d77dcacce draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 03235f29be6368f58bc730a20d87a13cf215310f"
author | iuc |
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date | Sat, 09 Apr 2022 08:32:58 +0000 |
parents | 3e5c80594237 |
children |
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4:e383d4bc8682 | 5:f33d77dcacce |
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1 <?xml version="1.0" encoding="UTF-8" standalone="no"?> | |
2 <!-- Begin document body --> | |
3 <fimo version="5.0.5" release="Mon Mar 18 20:12:19 2019 -0700"> | |
4 xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" | |
5 xsi:schemaLocation= xmlns:fimo="http://noble.gs.washington.edu/schema/fimo" | |
6 > | |
7 <settings> | |
8 <setting name="background file name">--uniform--</setting> | |
9 <setting name="allow clobber">false</setting> | |
10 <setting name="compute q-values">true</setting> | |
11 <setting name="parse genomic coord.">false</setting> | |
12 <setting name="text only">false</setting> | |
13 <setting name="scan both strands">true</setting> | |
14 <setting name="output threshold">0.01</setting> | |
15 <setting name="threshold type">p-value</setting> | |
16 <setting name="max stored scores">100000</setting> | |
17 <setting name="pseudocount">0.1</setting> | |
18 <setting name="verbosity">2</setting> | |
19 <setting name="selected motif">ACTAAYH</setting> | |
20 </settings> | |
21 <sequence-data num-sequences="1" num-residues="16569" /> | 1 <sequence-data num-sequences="1" num-residues="16569" /> |
22 <alphabet name="DNA" like="dna"> | 2 <alphabet name="DNA" like="dna"> |
23 <letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/> | 3 <letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/> |
24 <letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/> | 4 <letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/> |
25 <letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/> | 5 <letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/> |