diff test-data/dreme_output_test2.txt @ 6:fd05b142b3a3 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 93fe7345e2b6a97000975d978bf06513b3a442d9

--- a/test-data/dreme_output_test2.txt	Sat Apr 09 08:32:58 2022 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,55 +0,0 @@
-ALPHABET "RNA" RNA-LIKE
-A "Adenine" CC0000
-C "Cytosine" 0000CC
-G "Guanine" FFB300
-U "Uracil" 008000
-N "Any base" = ACGU
-X = ACGU
-. = ACGU
-V "Not U" = ACG
-H "Not G" = ACU
-D "Not C" = AGU
-B "Not A" = CGU
-M "Amino" = AC
-R "Purine" = AG
-W "Weak" = AU
-S "Strong" = CG
-Y "Pyrimidine" = CU
-K "Keto" = GU
-T = U
-END ALPHABET
-
-Background letter frequencies (from dataset):
-A 0.221 C 0.245 G 0.221 U 0.312
-
-
-MOTIF UUYUCY DREME-1
-
-#             Word        Pos        Neg    P-value    E-value
-# BEST      UUYUCY        387        210   2.6e-018   3.3e-013
-#           UUUUCC        147         75   1.8e-007   2.2e-002
-#           UUUUCU        155         94   2.2e-005   2.8e+000
-#           UUCUCU         94         51   1.3e-004   1.7e+001
-#           UUCUCC         75         42   1.1e-003   1.4e+002
-
-letter-probability matrix: alength= 4 w= 6 nsites= 459 E= 3.3e-013
-0.000000 0.000000 0.000000 1.000000
-0.000000 0.000000 0.000000 1.000000
-0.000000 0.294118 0.000000 0.705882
-0.000000 0.000000 0.000000 1.000000
-0.000000 1.000000 0.000000 0.000000
-0.000000 0.474946 0.000000 0.525054
-
-
-MOTIF YAGG DREME-2
-
-#             Word        Pos        Neg    P-value    E-value
-# BEST        YAGG        600        416   1.1e-016   1.4e-011
-#             CAGG        441        304   1.5e-010   1.8e-005
-#             UAGG        232        165   1.1e-004   1.3e+001
-
-letter-probability matrix: alength= 4 w= 4 nsites= 793 E= 1.4e-011
-0.000000 0.692308 0.000000 0.307692
-1.000000 0.000000 0.000000 0.000000
-0.000000 0.000000 1.000000 0.000000
-0.000000 0.000000 1.000000 0.000000
\ No newline at end of file