Mercurial > repos > iuc > meme_meme
diff test-data/meme_output_custom.xml @ 20:faa378fa0c81 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 89ee0af6e955ff964b7984d77ad536e0a9154278
| author | iuc |
|---|---|
| date | Mon, 14 Jul 2025 21:33:26 +0000 |
| parents | |
| children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/meme_output_custom.xml Mon Jul 14 21:33:26 2025 +0000 @@ -0,0 +1,946 @@ +<alphabet_matrix> +<alphabet_array> +<value letter_id="A">61</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">-897</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">443</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">0</value> +<value letter_id="G">-31</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">285</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">100</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">285</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">0</value> +<value letter_id="G">-897</value> +<value letter_id="T">8</value> +<value letter_id="a">433</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">61</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">433</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">61</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">478</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">100</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">-897</value> +<value letter_id="c">288</value> +<value letter_id="f">-897</value> +<value letter_id="g">478</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">285</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">61</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">-897</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">478</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">385</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">0</value> +<value letter_id="G">-31</value> +<value letter_id="T">-897</value> +<value letter_id="a">275</value> +<value letter_id="c">288</value> +<value letter_id="f">-897</value> +<value letter_id="g">478</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-39</value> +<value letter_id="C">-897</value> +<value letter_id="G">-31</value> +<value letter_id="T">-897</value> +<value letter_id="a">-897</value> +<value letter_id="c">288</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">385</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">0</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">388</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-31</value> +<value letter_id="T">-897</value> +<value letter_id="a">-897</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">485</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-31</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">388</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">507</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">275</value> +<value letter_id="c">488</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">275</value> +<value letter_id="c">388</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">385</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">-897</value> +<value letter_id="c">447</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">385</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">443</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">447</value> +<value letter_id="f">-897</value> +<value letter_id="g">-897</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">-897</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">375</value> +<value letter_id="c">-897</value> +<value letter_id="f">-897</value> +<value letter_id="g">478</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">385</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">-897</value> +<value letter_id="C">-897</value> +<value letter_id="G">-897</value> +<value letter_id="T">-897</value> +<value letter_id="a">275</value> +<value letter_id="c">388</value> +<value letter_id="f">-897</value> +<value letter_id="g">478</value> +<value letter_id="h">-897</value> +<value letter_id="m">-897</value> +<value letter_id="t">285</value> +<value letter_id="n1">-897</value> +<value letter_id="n2">-897</value> +<value letter_id="n3">-897</value> +<value letter_id="n4">-897</value> +<value letter_id="n5">-897</value> +</alphabet_array> +</alphabet_matrix> +</scores> +<probabilities> +<alphabet_matrix> +<alphabet_array> +<value letter_id="A">0.400000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.000000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.600000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.200000</value> +<value letter_id="G">0.200000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.200000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.400000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.200000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.200000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.200000</value> +<value letter_id="a">0.600000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.400000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.600000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.400000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.200000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.400000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.000000</value> +<value letter_id="c">0.200000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.200000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.200000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.400000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.000000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.200000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.400000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.200000</value> +<value letter_id="G">0.200000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.200000</value> +<value letter_id="c">0.200000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.200000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.200000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.200000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.000000</value> +<value letter_id="c">0.200000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.400000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.200000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.400000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.200000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.000000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.800000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.200000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.400000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">1.000000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.200000</value> +<value letter_id="c">0.800000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.200000</value> +<value letter_id="c">0.400000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.400000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.000000</value> +<value letter_id="c">0.600000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.400000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.600000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.600000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.000000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.000000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.400000</value> +<value letter_id="c">0.000000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.200000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.400000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +<alphabet_array> +<value letter_id="A">0.000000</value> +<value letter_id="C">0.000000</value> +<value letter_id="G">0.000000</value> +<value letter_id="T">0.000000</value> +<value letter_id="a">0.200000</value> +<value letter_id="c">0.400000</value> +<value letter_id="f">0.000000</value> +<value letter_id="g">0.200000</value> +<value letter_id="h">0.000000</value> +<value letter_id="m">0.000000</value> +<value letter_id="t">0.200000</value> +<value letter_id="n1">0.000000</value> +<value letter_id="n2">0.000000</value> +<value letter_id="n3">0.000000</value> +<value letter_id="n4">0.000000</value> +<value letter_id="n5">0.000000</value> +</alphabet_array> +</alphabet_matrix> +</probabilities> +<regular_expression> +[tA][aCGt][Cat][aCT][aA][Aag][Ccgt][Atg][CGacg][tAGc][acC][tG][acG]a[ca][cta][ct][ta][ca][atg][cagt] +</regular_expression> +<contributing_sites> +<contributing_site sequence_id="sequence_17" position="8" strand="plus" pvalue="1.01e-33" > +<left_flank>gatggttt</left_flank> +<site> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="g"/> +<letter_ref letter_id="g"/> +<letter_ref letter_id="g"/> +<letter_ref letter_id="g"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="g"/> +<letter_ref letter_id="g"/> +</site> +<right_flank>ctcagccctc</right_flank> +</contributing_site> +<contributing_site sequence_id="sequence_16" position="28" strand="plus" pvalue="7.62e-28" > +<left_flank>AGTTGGCATC</left_flank> +<site> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="t"/> +</site> +<right_flank>t</right_flank> +</contributing_site> +<contributing_site sequence_id="sequence_10" position="4" strand="plus" pvalue="2.07e-26" > +<left_flank>aaac</left_flank> +<site> +<letter_ref letter_id="t"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="a"/> +</site> +<right_flank>actCTAGAAT</right_flank> +</contributing_site> +<contributing_site sequence_id="sequence_19" position="28" strand="plus" pvalue="8.19e-18" > +<left_flank>AAGCCCCAGC</left_flank> +<site> +<letter_ref letter_id="A"/> +<letter_ref letter_id="G"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="A"/> +<letter_ref letter_id="A"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="A"/> +<letter_ref letter_id="G"/> +<letter_ref letter_id="G"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +</site> +<right_flank>a</right_flank> +</contributing_site> +<contributing_site sequence_id="sequence_22" position="29" strand="plus" pvalue="9.00e-16" > +<left_flank>ATCCCTGAGC</left_flank> +<site> +<letter_ref letter_id="A"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="T"/> +<letter_ref letter_id="A"/> +<letter_ref letter_id="A"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="A"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="A"/> +<letter_ref letter_id="C"/> +<letter_ref letter_id="G"/> +<letter_ref letter_id="G"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="a"/> +<letter_ref letter_id="c"/> +<letter_ref letter_id="t"/> +<letter_ref letter_id="c"/> +</site> +<right_flank></right_flank> +</contributing_site> +</contributing_sites> +</motif> +</motifs> +<scanned_sites_summary p_thresh="0.0001"> +<scanned_sites sequence_id="sequence_0" pvalue="9.99e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_1" pvalue="9.78e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_2" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_3" pvalue="9.99e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_4" pvalue="9.99e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_5" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_6" pvalue="9.61e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_7" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_8" pvalue="9.65e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_9" pvalue="9.67e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_10" pvalue="6.20e-25" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="4" pvalue="2.07e-26"/> +</scanned_sites> +<scanned_sites sequence_id="sequence_11" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_12" pvalue="7.25e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_13" pvalue="9.59e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_14" pvalue="7.20e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_15" pvalue="9.99e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_16" pvalue="2.29e-26" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="28" pvalue="7.62e-28"/> +</scanned_sites> +<scanned_sites sequence_id="sequence_17" pvalue="3.02e-32" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="8" pvalue="1.01e-33"/> +<scanned_site motif_id="motif_1" strand="plus" position="29" pvalue="1.08e-05"/> +</scanned_sites> +<scanned_sites sequence_id="sequence_18" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_19" pvalue="2.46e-16" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="28" pvalue="8.19e-18"/> +</scanned_sites> +<scanned_sites sequence_id="sequence_20" pvalue="1.27e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="28" pvalue="4.22e-05"/> +</scanned_sites> +<scanned_sites sequence_id="sequence_21" pvalue="9.58e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_22" pvalue="2.70e-14" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="29" pvalue="9.00e-16"/> +</scanned_sites> +<scanned_sites sequence_id="sequence_23" pvalue="9.69e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_24" pvalue="2.53e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="28" pvalue="8.43e-05"/> +</scanned_sites> +<scanned_sites sequence_id="sequence_25" pvalue="9.67e-01" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_26" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_27" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_28" pvalue="1.00e+00" num_sites="0"></scanned_sites> +<scanned_sites sequence_id="sequence_29" pvalue="1.00e+00" num_sites="0"></scanned_sites> +</scanned_sites_summary> +</MEME>
