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The name of the motif uses the IUPAC codes for nucleotides which has
a different letter to represent each of the 15 possible combinations.
The name is itself a representation of the motif though the position
weight matrix is not directly equivalent as it is generated from the
sites found that matched the letters given in the name.
The E-value is the enrichment p-value times the number of candidate
motifs tested.
The enrichment p-value is calculated using Fisher's Exact Test for
enrichment of the motif in the positive sequences.
Note that the counts used in Fisher's Exact Test are made after
erasing sites that match previously found motifs.
The E-value of the motif calculated without erasing the sites of
previously found motifs.
Show more information on the motif.
Submit your motif to another MEME Suite program or download your motif.
Supported Programs
Tomtom
Tomtom is a tool for searching for similar known motifs.
MAST
MAST is a tool for searching biological sequence databases for
sequences that contain one or more of a group of known motifs.
FIMO
FIMO is a tool for searching biological sequence databases for
sequences that contain one or more known motifs.
GOMo
GOMo is a tool for identifying possible roles (Gene Ontology
terms) for DNA binding motifs.
SpaMo
SpaMo is a tool for inferring possible transcription factor
complexes by finding motifs with enriched spacings.