Mercurial > repos > iuc > meme_psp_gen
diff test-data/meme_output_custom.html @ 8:8436beac5eed draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 89ee0af6e955ff964b7984d77ad536e0a9154278
| author | iuc |
|---|---|
| date | Mon, 14 Jul 2025 21:32:53 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/meme_output_custom.html Mon Jul 14 21:32:53 2025 +0000 @@ -0,0 +1,276 @@ + "options": { + "mod": "zoops", + "revcomp": false, + "nmotifs": 1, + "objfun": "E-value of product of p-values", + "spfun": "E-value of product of p-values", + "minw": 8, + "maxw": 50, + "minsites": 2, + "maxsites": 30, + "wnsites": 0.8, + "spmap": "uni", + "spfuzz": 0.5, + "searchsize": 1500, + "maxsize": 1000000, + "norand": "no", + "csites": 1000, + "hsfrac": 0, + "prior": "dirichlet", + "b": 0.01, + "maxiter": 50, + "distance": 0.001, + "wg": 11, + "ws": 1, + "noendgaps": false, + "substring": true, + "seed": 0, + "brief": 1000 + }, + "alphabet": { + "name": "DNA with covalent modifications", + "like": "dna", + "ncore": 16, + "symbols": [ + { + "symbol": "A", + "name": "Adenine", + "colour": "8510A8", + "complement": "T" + }, { + "symbol": "C", + "name": "Cytosine", + "colour": "A50026", + "complement": "G" + }, { + "symbol": "G", + "name": 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