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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 03235f29be6368f58bc730a20d87a13cf215310f"
author iuc
date Sat, 09 Apr 2022 08:33:29 +0000
parents ff2f53a32d0e
children
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    <td style="padding-right: 2em">background file name = --nrdb--</td>
    <td style="padding-left: 5em; padding-right: 2em">alphabet = DNA</td>
    <td style="padding-left: 5em; padding-right: 2em">max stored scores = 100000</td>
  </tr>  <tr>
    <td style="padding-right: 2em">allow clobber = false</td>
    <td style="padding-left: 5em; padding-right: 2em">compute q-values = true</td>
    <td style="padding-left: 5em; padding-right: 2em">parse genomic coord. = false</td>
  </tr>
  <tr>
    <td style="padding-right: 2em">text only = false</td>
    <td style="padding-left: 5em; padding-right: 2em">scan both strands = true</td>
    <td style="padding-left: 5em; padding-right: 2em">max strand = false</td>
  </tr>
  <tr>
    <td style="padding-right: 2em">threshold type = p-value</td>
    <td style="padding-left: 5em; padding-right: 2em">output theshold = 0.0001</td>
    <td style="padding-left: 5em; padding-right: 2em">pseudocount = 0.1</td>
  </tr>
  <tr>
    <td style="padding-right: 2em">alpha = 1</td>
    <td style="padding-left: 5em; padding-right: 2em">verbosity = 2</td>
    <td style="padding-left: 5em; padding-right: 2em"></td>
  </tr>

</table>
</pre>
<p>
This information can be useful in the event you wish to report a
problem with the FIMO software.
</p>
<hr>
<span style="background-color: #DDDDFF"><a href="#top_buttons"><b>Go to top</b></a></span>
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