Mercurial > repos > iuc > meme_psp_gen
view test-data/meme_output_html_2.html @ 0:a0fa4efeeee3 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meme commit 3f116ddc83447056068573320c148a9bfca9aa2e
| author | iuc |
|---|---|
| date | Wed, 23 Aug 2017 20:57:34 -0400 |
| parents | |
| children |
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<!DOCTYPE HTML> <html> <head> <meta charset="UTF-8"> <title>MEME</title> <script> // @JSON_VAR data var data = { "program": "MEME", "stop_reason": "Stopped because requested number of motifs (1) found.", "cmd": [ "meme", ], "options": { "mod": "zoops", "revcomp": false, "nmotifs": 1, "minw": 8, "maxw": 50, "minsites": 2, "maxsites": 30, "wnsites": 0.8, "spmap": "uni", "spfuzz": 0.5, "maxwords": -1, "prior": "dirichlet", "b": 0.01, "maxiter": 50, "distance": 0.001, "wg": 11, "ws": 1, "noendgaps": false, "substring": true }, "alphabet": { "name": "DNA", "like": "dna", "ncore": 4, "symbols": [ { "symbol": "A", "name": "Adenine", "colour": "CC0000", "complement": "T" }, { "symbol": "C", "name": "Cytosine", "colour": "0000CC", "complement": "G" }, { "symbol": "G", "name": "Guanine", "colour": "FFB300", "complement": "C" }, { "symbol": "T", "aliases": "U", "name": "Thymine", "colour": "008000", "complement": "A" }, { "symbol": "N", "aliases": "X.", "name": "Any base", "equals": "ACGT" }, { "symbol": "V", "name": "Not T", "equals": "ACG" }, { "symbol": "H", "name": "Not G", "equals": "ACT" }, { "symbol": "D", "name": "Not C", "equals": "AGT" }, { "symbol": "B", "name": "Not A", "equals": "CGT" }, { "symbol": "M", "name": "Amino", "equals": "AC" }, { "symbol": "R", "name": "Purine", "equals": "AG"