annotate update_db.py @ 1:7f88b804fc0c draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit ac4610f4f81de5ab3a71fc28cbe3cdb1696ef667
author iuc
date Wed, 13 Mar 2024 11:52:59 +0000
parents b5f872c50249
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
parents:
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1 #!/usr/bin/env python3
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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3 import pathlib
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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4 import shutil
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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5 import subprocess
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
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6
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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7 import meningotype
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
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b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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9 if __name__ == '__main__':
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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10 db_path = 'db'
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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11 original_db_path = pathlib.Path(meningotype.__file__).parent / 'db'
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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12 shutil.copytree(original_db_path, db_path)
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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13 cmd = ["meningotype", "--updatedb", "--db", db_path]
b5f872c50249 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/meningotype commit b4e0bbb9a2a23cbac9137a96d59bc1775c23c8a5
iuc
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14 subprocess.run(cmd)