diff macros.xml @ 0:47189346d00d draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/metasbt commit 5509a3fab8eb49e931a5fde335dd7030e16737f5

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Fri Aug 22 19:04:25 2025 +0000
@@ -0,0 +1,68 @@
+<macros>
+    <token name="@TOOL_VERSION@">0.1.5</token>
+    <token name="@GALAXY_VERSION@">1</token>
+    <token name="@PROFILE@">24.00</token>
+
+    <xml name="creator">
+        <creator>
+            <person givenName="Fabio" familyName="Cumbo"
+                    url="https://cumbof.github.io/"
+                    email="[e-mail]" />
+
+            <person givenName="Daniel" familyName="Blankenberg"
+                    url="https://www.lerner.ccf.org/computational-medicine/blankenberg/"
+                    email="[e-mail]" />
+        </creator>
+    </xml>
+
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" version="4.9">sed</requirement>
+            <requirement type="package" version="@TOOL_VERSION@">metasbt</requirement>
+        </requirements>
+    </xml>
+
+    <xml name="database">
+        <conditional name="database_selection">
+            <param name="source" type="select"
+                    label="Database source"
+                    help="Public databases are hosted on the Galaxy CVMFS.">
+                <option value="cvmfs" selected="true">Use a public database</option>
+                <option value="history">Use a database from the history</option>
+            </param>
+
+            <when value="cvmfs">
+                <param name="db_tarball" type="select"
+                        label="Select a MetaSBT database"
+                        help="Choose a specific version of a database.">
+                    <options from_data_table="metasbt_databases">
+                        <column name="value" index="0" />
+                        <column name="version" index="1" />
+                        <column name="name" index="2" />
+                        <column name="path" index="3" />
+                        <filter type="sort_by" column="0" reverse_sort_order="true"/>
+                        <validator message="No MetaSBT database is available" type="no_options"/>
+                    </options>
+                </param>
+            </when>
+
+            <when value="history">
+                <param name="db_tarball" type="data" format="tar"
+                       label="Select a MetaSBT database tarball" />
+            </when>
+        </conditional>
+    </xml>
+
+    <xml name="citations">
+        <citations>
+            <citation type="bibtex">
+@misc{metasbtrepo,
+    author={Fabio Cumbo, Daniel Blankenberg},
+    title={{MetaSBT: A scalable framework for automatically indexing microbial genomes and accurately characterizing metagenome-assembled genomes with Sequence Bloom Trees}},
+    publisher={Github},
+    url={https://github.com/cumbof/MetaSBT}
+}
+            </citation>
+        </citations>
+    </xml>
+</macros>
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