view test-data/test_stop_codon.out @ 1:fbbe507e692b draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/migmap commit 9028fa28c7b3216926bf999dd21c5f156d1cc63e

read.header	cdr3nt	cdr3aa	cdr.insert.qual	mutations.qual	v.segment	d.segment	j.segment	cdr1.start.in.read	cdr1.end.in.read	cdr2.start.in.read	cdr2.end.in.read	cdr3.start.in.read	cdr3.end.in.read	v.end.in.cdr3	d.start.in.cdr3	d.end.in.cdr3	j.start.in.cdr3	v.del	d.del.5	d.del.3	j.del	mutations.nt.FR1	mutations.nt.CDR1	mutations.nt.FR2	mutations.nt.CDR2	mutations.nt.FR3	mutations.nt.CDR3	mutations.nt.FR4	rc	complete	has.cdr3	in.frame	no.stop	mutations.aa.FR1	mutations.aa.CDR1	mutations.aa.FR2	mutations.aa.CDR2	mutations.aa.FR3	mutations.aa.CDR3	mutations.aa.FR4	pol.v	pol.d.5	pol.d.3	pol.j	canonical	contignt
>AACATAGTAAATCAGTC|PRCONS=Human-IGHA|SEQORIENT=F|CREGION=Human-TRA-InternalC|CONSCOUNT=1|DUPCOUNT=1	.	.			IGHV4-39*05	IGHD2/OR15-2a*01	IGHJ4*01	215	216	-1	-1	-1	-1	-1	-1	-1	-1	-1	-1	-1	-1	S55:C>A,S57:C>G,S62:C>T,S63:T>A,S64:G>C							false	false	false	true	false	S18:S>Y,S19:L>V,S20:T>T,S21:C>T,S21:C>T							-1	-1	-1	-1	false	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCCCGTACGTCACTACCACTGTCTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN