Mercurial > repos > iuc > miniprot
changeset 6:20d725740701 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/miniprot commit fee066da2d0836fe14b7243fc108ddde0e23e248
| author | iuc |
|---|---|
| date | Tue, 15 Jul 2025 18:28:26 +0000 |
| parents | 6b20d051d0dc |
| children | |
| files | macros.xml miniprot.xml test-data/output_spsc.gff test-data/spsc.tsv |
| diffstat | 4 files changed, 1275 insertions(+), 8 deletions(-) [+] |
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--- a/macros.xml Thu Mar 28 17:28:56 2024 +0000 +++ b/macros.xml Tue Jul 15 18:28:26 2025 +0000 @@ -1,5 +1,5 @@ <macros> - <token name="@TOOL_VERSION@">0.13</token> + <token name="@TOOL_VERSION@">0.18</token> <token name="@VERSION_SUFFIX@">0</token> <xml name="citation"> <citations>
--- a/miniprot.xml Thu Mar 28 17:28:56 2024 +0000 +++ b/miniprot.xml Tue Jul 15 18:28:26 2025 +0000 @@ -60,6 +60,12 @@ #else if str($output_format) == "gtf" --gtf #end if + + #if str($splice.spsc_file) != 'None': + --spsc '$splice.spsc_file' + --spsc0 $splice.spsc0 + #end if + '$protein_fasta' > '$output_alignment' ]]></command> @@ -87,6 +93,12 @@ <option value="paf">PAF</option> <option value="gtf">GTF</option> </param> + + <section name="splice" title="Splice sites"> + <param name="spsc_file" type="data" format="tsv,txt" optional="true" label="Splice score file" help="format: 'ctg offset +|- D|A score'"/> + <param name="spsc0" type="integer" value="-7" optional="true" label="Splice score" help="Score to assign to splice sites not listed in the splice score file"/> + </section> + <conditional name="adv"> <param name="options" type="select" label="Advanced options"> <option value="yes">Show</option> @@ -144,6 +156,7 @@ <param argument="--trans" name="output_translated_protein" type="boolean" truevalue="--trans" falsevalue="" checked="false" label="Output translated protein sequences" help="Skipping frameshift"/> <param argument="--no-cs" name="output_no_cs" type="boolean" truevalue="--no-cs" falsevalue="" checked="false" label="Disable the cs tag"/> </section> + <param argument="-K" name="query_batch_size" type="integer" min="1" value="2000000" label="Query batch size"/> <param argument="-T" name="ncbi_table" type="select" optional="true" label="Enter NCBI translation table"> <option value="1">1 Standard code</option> @@ -195,8 +208,7 @@ <param name="protein_fasta" value="input_query.fasta.gz" ftype="fasta"/> <output name="output_alignment" ftype="gff3"> <assert_contents> - <has_text text="ID=MP000001;Rank=1;Identity=0.3420;Positive=0.5104;Target=tr|I6YGH7|I6YGH7_MYCTU 1 375"/> - <has_text text="ID=MP000066;Rank=1;Identity=0.3613;Positive=0.5178;Target=sp|P9WQE5|PPSB_MYCTU 1 1214"/> + <has_n_lines n="1297"/> </assert_contents> </output> </test> @@ -266,7 +278,7 @@ <assert_contents> <has_text text="tr|I6YGH7|I6YGH7_MYCTU" /> <has_text text="VDIDLDPSTEKLRAQIRAEVAALKAMPREPRTVAIAEGGWVLPYLPKPWGRAASPVEQIIIAQEFTAGRVKRPQIAIATWIVPSIVAFGTDNQKQRLLPPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTGAQYSQWGALLARTDPSAPKHNGITYFLLDMKSEGVQVKPLRELTGKEFFNTVYLDDVFVPDELVLGEVNRGWEVSRNTLTAERVSIGGSDSTFLPTLGEFVDFVRDYRFEGQFDQVARHRAGQLIAEGHATKLLNLRSTLLTLAGGDPMAPAAISKLLSMRTGQGYAEFAVSSFGTDAVIGDTERLPGKWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP"/> - <has_n_lines n="1647"/> + <has_n_lines n="1623"/> </assert_contents> </output> </test> @@ -285,10 +297,8 @@ </conditional> <output name="output_alignment" ftype="gtf"> <assert_contents> - <has_text text="tr|I6YGH7|I6YGH7_MYCTU"/> - <has_text text="VDIDLDPSTEKLRAQIRAEVAALKAMPREPRTVAIAEGGWVLPYLPKPWGRAASPVEQIIIAQEFTAGRVKRPQIAIATWIVPSIVAFGTDNQKQRLLPPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTGAQYSQWGALLARTDPSAPKHNGITYFLLDMKSEGVQVKPLRELTGKEFFNTVYLDDVFVPDELVLGEVNRGWEVSRNTLTAERVSIGGSDSTFLPTLGEFVDFVRDYRFEGQFDQVARHRAGQLIAEGHATKLLNLRSTLLTLAGGDPMAPAAISKLLSMRTGQGYAEFAVSSFGTDAVIGDTERLPGKWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP"/> <has_text text="NC_000962.3"/> - <has_n_lines n="2196"/> + <has_n_lines n="2152"/> </assert_contents> </output> </test> @@ -310,7 +320,7 @@ <has_text text="tr|I6YGH7|I6YGH7_MYCTU"/> <has_text text="VDIDLDPSTEKLRAQIRAEVAALKAMPREPRTVAIAEGGWVLPYLPKPWGRAASPVEQIIIAQEFTAGRVKRPQIAIATWIVPSIVAFGTDNQKQRLLPPTFRGDIFWCQLFSEPGAGSDLASLATKATRVDGGWRITGQKIWTTGAQYSQWGALLARTDPSAPKHNGITYFLLDMKSEGVQVKPLRELTGKEFFNTVYLDDVFVPDELVLGEVNRGWEVSRNTLTAERVSIGGSDSTFLPTLGEFVDFVRDYRFEGQFDQVARHRAGQLIAEGHATKLLNLRSTLLTLAGGDPMAPAAISKLLSMRTGQGYAEFAVSSFGTDAVIGDTERLPGKWGEYLLASRATTIYGGTSEVQLNIIAERLLGLPRDP"/> <has_text text="sp|O05779|FTSE_MYCTU"/> - <has_n_lines n="654"/> + <has_n_lines n="652"/> </assert_contents> </output> </test> @@ -377,6 +387,28 @@ </assert_contents> </output> </test> + <test expect_num_outputs="1"> + <conditional name="db"> + <param name="dbtype" value="fasta"></param> + <param name="genomic_fasta" value="input_genome.fasta.gz" ftype="fasta"></param> + </conditional> + <param name="protein_fasta" value="input_query.fasta.gz" ftype="fasta"></param> + <param name="spsc_file" value="spsc.tsv" ftype="tsv"></param> + <param name="output_format" value="gff"></param> + <conditional name="adv"> + <param name="options" value="yes"/> + <section name="output"> + <param name="output_translated_protein" value="true"/> + </section> + </conditional> + <output name="output_alignment" ftype="gff3"> + <assert_contents> + <has_text text="tr|O53632|O53632_MYCTU"/> + <has_text text="##gff-version 3"/> + <has_n_lines n="1559"/> + </assert_contents> + </output> + </test> </tests> <help><![CDATA[
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output_spsc.gff Tue Jul 15 18:28:26 2025 +0000 @@ -0,0 +1,1234 @@ +##gff-version 3 +##PAF tr|I6YGH7|I6YGH7_MYCTU 377 0 375 - NC_000962.3 699930 326271 327381 396 1158 0 AS:i:516 ms:i:512 np:i:197 fs:i:0 st:i:0 da:i:9 do:i:3 cg:Z:17M1D20M14I2M1I24M1I195M4D61M6D40M cs:Z:*gtaM:1*atcL*gacN*ctgF:1*cccD*tctE:1*gagL*aagA*ctgF*cggQ:1*cagE*atcV:1-gcc:1*gtcF*gccL:1*ctgA*aagN:1*atgA*ccgS*cgaI*gagP*ccgT*cgcK*actS*gtcY*gcgD*atcN:3+FAQHRYWDRVLFDA:1*tggL+S:1*ctgI*ccaT*tatW*ctgP*cccA:1*ccgY*tggG:2*gccD:1*agcP*ccgL*gtcL*gagH*cagW:1*atcV*atcF*gccE*cagE:1+Y:1*accR:2*cggA*gtcP*aagG:1*ccgA*cagS*attA*gccN*atcG*gcgT*acgS*tggM*atcL*gtgA:1*tcgT*atcL*gtcF:1*ttcH:2*gacA*aatE:1*aagL*cagD:1*ctcI:2*ccaK*acgM*ttcA*cgaS:1*gacE*attQ*ttcI:1*tgcA:1*ctgA*ttcW:3*ggcE*gcgS:7*gcaR*accS*aagT:1*accS*cggK:5*cgcL*atcL*actN:5*accS*accS*ggcR:1*cagP*tacF*tccA*caaD*tggM:1*gcgF*ctgG:1*gcgF:1*acgS:2*tcgA*gcgV*cccE*aagR:1*aacR:1*atcL:3*ctgM*ctgF:1*atgL:1*agcA*gaaK:2*caaT:1*aagR:1*ctgI*cgcA*gagQ:1*acgG:1*aagD*gagT*tttG:1*aacG*accE*gtcI*tacF:8*gagR*ttgD:1*ctcI:1*gagA*gtgP:1*cggD:2*gagR*gtcA*agcA*cgcM*aacS:1*ctgS*acgS*gccN:2*gtgG*tcgM*atcS*ggcL*ggcR:1*gatP*tcgA*accR:2*cccA*accS*ctgA*ggcE*gagR*ttcL:1*gacQ*ttcL*gttW*cgcK:1*tacR*cgtG*ttcS*gaaP*ggaP*cagE:1-gaccaggtcgcg*cgaA*cacD:1*gccV*gggA*caaD*ttgA*atcW*gccI*gagK*ggcA*cacQ:1*accY*aagR:1*ctcQ*aacT*ttgF*cgcG*tccT*acgV*ctgT*ttgR*acgL*ctgA:3*gacE*ccgL*atgG:1*ccgE*gcgS*gcgS*atcV*tccT:1*ctgV*ttgF*tccW*atgS*cgcE*accL*ggcD*cagV*ggtH*tatL*gccH*gaaQ*ttcT:1*gtgL*tcgD*tccL*tttR:1*accA:1*gcgG-gtgatcggcgacacagag*cgaE:1*cccA:1*aagP:1*ggcT:1*tacG:2*gccF*agcA*cggL*gccG*accG*accP:2*gggA:2*tcgN:1*gtcI:1*ctcR:12*gacE +NC_000962.3 miniprot mRNA 326272 327381 512 - . ID=MP000001;Rank=1;Identity=0.3420;Positive=0.5104;Target=tr|I6YGH7|I6YGH7_MYCTU 1 375 +NC_000962.3 miniprot CDS 326272 327381 512 - 0 Parent=MP000001;Rank=1;Identity=0.3420;Target=tr|I6YGH7|I6YGH7_MYCTU 1 375 +##PAF sp|O05779|FTSE_MYCTU 230 2 213 + NC_000962.3 699930 81684 82323 219 642 0 AS:i:300 ms:i:300 np:i:116 fs:i:0 st:i:0 da:i:-1 do:i:342 cg:Z:13M2D66M1D121M1I10M cs:Z:*ctcI*agcT*attL*cagD*aacH*ctcV*gtcT*gttK*gagQ:1*tacK:1*ggtS-ggatac:1*cttR*aggP*ccgA*atcL*aacD*ggtD*ttgI:1*ctcV*gacK*gtgI*gcaD*gccK:1*tcgE*ttgF:1*atgF:1*ctcI:4*tgcS:2*acgS:1*ctgF*cttM*tccR*tgtL:1*ggcL*ggcA*attA*ctgE*cgcT:1*aagT:2*gcgD*atcV*aagR*ttcV*gacS*gaaK*gtcF*gacH*atcV*acgN*acgK:1*caaR:1*gccR*gagH*ctgV*gcgP*aacK*tacL:1*cgtQ-aac*aagV*gtcI:1*atcC:3*gcgD:1*aatR:1*gtgL*cccQ*agcQ*ctgK:1*gctV*gtcY*gagD:2*atgA*gtgF*ccgA:1*cgcE*tcgV*gccI:1*atgK*tcaR*cgcT*aggD:1*tcgI*cgtN:1*cgtV*gccV*gaaP:1*ctgV:1*gcgE*cgcT:1*aatG:1*gcgS*gaaG*cgaK*atgA:1*catR*cgaL:1*ggtD*gatE:4*cagE:5*gtgI:3*attF*gcgV*ctgN*gatR:1*ccaL*ctgV*atcL:6*gcaG*cacN:2*ttcP*atcE*cagT*gtgS*gagR*gagD*gtgI*ctgM*cggD:1*atcL*cgcE*gaaR*ctgI*gccN*gatR*ggcT*gagG*cgtT*gtgT:1*gtgL*gtcM:4*agcH*aggH*atgI*ttgV+D*ccgS:1*gccR*gatQ:5*acaS +NC_000962.3 miniprot mRNA 81685 82323 300 + . ID=MP000002;Rank=1;Identity=0.3411;Positive=0.5421;Target=sp|O05779|FTSE_MYCTU 3 213 +NC_000962.3 miniprot CDS 81685 82323 300 + 0 Parent=MP000002;Rank=1;Identity=0.3411;Target=sp|O05779|FTSE_MYCTU 3 213 +##PAF tr|O06302|O06302_MYCTU 126 0 126 + NC_000962.3 699930 423638 424016 378 378 0 AS:i:620 ms:i:620 np:i:126 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:126M cs:Z::126 +NC_000962.3 miniprot mRNA 423639 424019 620 + . ID=MP000003;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06302|O06302_MYCTU 1 126 +NC_000962.3 miniprot CDS 423639 424019 620 + 0 Parent=MP000003;Rank=1;Identity=1.0000;Target=tr|O06302|O06302_MYCTU 1 126 +NC_000962.3 miniprot stop_codon 424017 424019 0 + 0 Parent=MP000003;Rank=1 +##PAF sp|O06391|Y525_MYCTU 202 0 202 + NC_000962.3 699930 616222 616828 606 606 0 AS:i:1071 ms:i:1071 np:i:202 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:202M cs:Z::202 +NC_000962.3 miniprot mRNA 616223 616831 1071 + . ID=MP000004;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O06391|Y525_MYCTU 1 202 +NC_000962.3 miniprot CDS 616223 616831 1071 + 0 Parent=MP000004;Rank=1;Identity=1.0000;Target=sp|O06391|Y525_MYCTU 1 202 +NC_000962.3 miniprot stop_codon 616829 616831 0 + 0 Parent=MP000004;Rank=1 +##PAF tr|O06394|O06394_MYCTU 529 0 529 + NC_000962.3 699930 618304 619891 1587 1587 0 AS:i:2736 ms:i:2736 np:i:529 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:529M cs:Z::529 +NC_000962.3 miniprot mRNA 618305 619894 2736 + . ID=MP000005;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06394|O06394_MYCTU 1 529 +NC_000962.3 miniprot CDS 618305 619894 2736 + 0 Parent=MP000005;Rank=1;Identity=1.0000;Target=tr|O06394|O06394_MYCTU 1 529 +NC_000962.3 miniprot stop_codon 619892 619894 0 + 0 Parent=MP000005;Rank=1 +##PAF tr|O53632|O53632_MYCTU 249 0 249 + NC_000962.3 699930 133019 133766 747 747 0 AS:i:1267 ms:i:1267 np:i:249 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:249M cs:Z::249 +NC_000962.3 miniprot mRNA 133020 133769 1267 + . ID=MP000006;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53632|O53632_MYCTU 1 249 +NC_000962.3 miniprot CDS 133020 133769 1267 + 0 Parent=MP000006;Rank=1;Identity=1.0000;Target=tr|O53632|O53632_MYCTU 1 249 +NC_000962.3 miniprot stop_codon 133767 133769 0 + 0 Parent=MP000006;Rank=1 +##PAF tr|O53651|O53651_MYCTU 229 0 229 + NC_000962.3 699930 237205 237892 687 687 0 AS:i:1144 ms:i:1144 np:i:229 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:229M cs:Z::229 +NC_000962.3 miniprot mRNA 237206 237895 1144 + . ID=MP000007;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53651|O53651_MYCTU 1 229 +NC_000962.3 miniprot CDS 237206 237895 1144 + 0 Parent=MP000007;Rank=1;Identity=1.0000;Target=tr|O53651|O53651_MYCTU 1 229 +NC_000962.3 miniprot stop_codon 237893 237895 0 + 0 Parent=MP000007;Rank=1 +##PAF tr|O53680|O53680_MYCTU 193 0 193 + NC_000962.3 699930 330421 331000 579 579 0 AS:i:1032 ms:i:1032 np:i:193 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:193M cs:Z::193 +NC_000962.3 miniprot mRNA 330422 331003 1032 + . ID=MP000008;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53680|O53680_MYCTU 1 193 +NC_000962.3 miniprot CDS 330422 331003 1032 + 0 Parent=MP000008;Rank=1;Identity=1.0000;Target=tr|O53680|O53680_MYCTU 1 193 +NC_000962.3 miniprot stop_codon 331001 331003 0 + 0 Parent=MP000008;Rank=1 +##PAF sp|O53901|PKS5_MYCTU 2108 15 882 + NC_000962.3 699930 486051 488622 1005 2634 0 AS:i:1369 ms:i:1366 np:i:465 fs:i:0 st:i:0 da:i:321 do:i:1314 cg:Z:36M6I6M5I57M1D16M1D199M4D68M1I28M1D18M2I29M1I46M2D62M2D91M4I133M2I57M cs:Z::6*gtgM:3*tttL:2*gatG:2*ggcS:1*gaaD:3*gacE*tttA:1*accL*gagR*aagG*aagD*tgtD*gcgL*ataV:1*gcgE*tatI:1+ADRWDI:1*cgtE*gggY*ttcY*acgD*aatP+EPGVP*gctG*ggaR:1*ttcD*gcgC*gagK*tccW:1*ggcA*tttY:1*aagD*gatN:1*gcgG*ggtD:2*aatP*agaE:2*gatG:1*ccgG*ccgE*gacK:2*ctgI*cgaA*atgI:3*caaH:5*gtcT:4*ttaM:2*gcaG:1*attL*attT:1*gagN*tcaQ*ttaM-aga*cttA:8*gtgL*tcgV*tcaH:3*gtcI-cgg:2*tcaH:1*agcD*gctN:1*caaT*aagF*tctE*actG*attP*tggY*gatG:3*ggtT*tctN*tcgA*agtC*attF*attA*gccS*aatG:1*atcV*tcaA:1*tttA*ctcM*gatG*attL:3*tccA:1*gtcT*attV:6*tccG:1*gtcT:1*gtgI:7*agtH*accD*tggG*gacE*tgcS:4*gtcA:2*acgV*aatY:1*cttM*attL*tcaE:1*gaaR*ccaR*tggF*ggtA*gggS*tttG*aggS*gaaA*gcgL:1*atcM:2*cagA:2*tgcR:5*aaaV:4*atgF:1*cgcS:4*ggaV*gttM*atcL*gtgA:1*cagK:2*agtP:2*cgcL*cttA*gagD:1*cggD:4*attV*ctgI*acgR:1*tcaT:1*gtcA:4*aagH*tccT*aacV*ggtN:1*atgA*gcgT:1*aatS*cctR:3*attV*ggtA*gttA*cttY*gaaR*aatE:1*tgcL*aagD*agcV:1*cgcG:3*ctgA*gaaT*atcV:1*tacM:5*accP:2*tcgP*ttaV:2*aggP:2*gcgY*cacA*gccS:1*ggcA*atgE:1*tttY:1-cgcaagagaccg*ggaN*tctD:2*ctgC*atgA*atcL*gggA:1*atcV:1*ccgT:1*atcF:2*ctgT*gaaQ*ggtS:3*atcA*gccL:2*atcM:4*atgA*gttL*gagQ*cgtH:1*tcgV*ctgV*cttP*ccgQ*agcN*gggL*gggH:2*gagA*ccaL*aatP*ccaD*gctK*atcL*ccaA*ttcA*acgI:1*ttgT*ggcN:1*agaF:1*gtaP*gacQ:1*cttI*cagT*gagP:2+G*gtgA*gtgD*gcgQ*ggtE*cggT:4*gggA:3*ttcY:1*tttM*ggcT:3*gcgV:1*gtgA:3*gaaQ:1-ggt*tcgP:1*gggP:1*gacP*acgE*gttS*tcgG*ggcA*cgcP*gcgG:1*gttT*ggcP*ggtA*tccT*ggtP:1+ID:1*gtgA*gtgL*gcgL*tggF*gtgA*attL:1*gggA*aagS*acgS*gctQ*tcgD:2*gctR*gctQ*cagT:1*ggtA:2*gggA*cggD*tatW:1*cggD:1*cggQ+G:1*gcgE:1*gatA*gttP*gttA:1*gtgL*gggA:1*tcgT:1*gtgA*agcR*acgR:1*tcgG*gtgH*tttR*gatP*catV:1*gcgT*gtgA:1*gtcL*ggcA*cagA:1*cgcT*gatA:2*ctgT*gctE*gggA:1*gctR*gggE:1*gttA*gctT:1*cggE:1*gagP-gctggg*gtgY*gtcP*tgcP*ggtA:2*aagQ*ccgD*gcgD*ggcR*aagG*acgP*gctV*tttW:2*gccS:6*ctgA:3*agcA*gagD:1*tatL:1*gccT*tacE:4*gagA*gccT*ctcI*gatA:1*gtgI*gtgE*gacP*gagL*ttgI*gacA*cggA*cacE*ctgS*cggG*tatF*ccgS*ctgV*cgcT*gatE*gtgA*atcM*tggT*gggA-cacgac*caaP*gatE*ctgV*ttgV*aatT*accG*accI*gaaD*ttcR*gccV:2*gcgT:3*gtgM*gagQ:3*tatA*cggA*ctgT*ctcM*atgK:1*tggY:2*cggA:2*ttgA:1*ctgI:3*gtgL:2*ttgS:3*cacV:7*ccgE:1*gcgG*gcgV*atgR*ctgV*gtgI*gccC*gcgR:1*ggaS*cggA:2*cagT*gcgR*ttgI*cccA*gccG*ggcA:3*tttA*gcgS:1*cagE*gccL*cgtP*gaaA*gacQ*gagQ:1*gcgL*ccgS*atgE:1+MARG*gggV*cacN:1*gtgA*agcV*atcV:1*gcgV:1*aatA*ggtS:1*gctQ:1*gtgT:2*tctG:2*cacT*gatQ*gcgT:1*agcR*gcgD*atcL*gctV*gatA*cggA*ctgW*cgcE*ggcQ*cagR*ggcD*cgtV*cggL*gtcA*cacR*cggE*ttgV:2*tcgD*catV:1*tttS:2*gcgP*ttgQ*atgV*gagD:1*atgI*atcL*gctD:1*ttcL*acaA*gccE*gttA*gcgL:2*ctgI:1*gtgP*ggcL*ttgQ:1*acgE:2*gtcY*attY:1*aatA*gtgT*accS*gggF*cagD*ttgP*gtgR*gccE*gacE*gacP*ttcY*gccC*tcaD:1*gatY:2*gccV*cggD*catN*atcL:1*gcgH*gtgT:3*ggcA*gacA*agtA:1*cgtQ*agtA:1*cacL*tgcE*gccD:1*gccY*agtR*cgtV:1*atcT:1*gtcL*gggT:1*ggtH*ggcP*ggcL:2*tcgH*ttgA*atcV*gagD+QT:1*tcgR*ctgS*gccL:1*gcgM*cagS*atcA*gtgA*tcgA*gtgL*cccA*acgG*ctgM:1*aaaR*gatE*cggQ:1*gaaL:1*gtcH*agtG*gtgL*atgR*acgA*gcgL:1*gccG*cagD*ggcL*ttcY*gtcA*tcgA:1*atgA*ggcA*ctgV:1*tggF:1*tcgV*gtgL*tttY*tccP*gggT*tacG:1*cccL*aagI*cggN*gtgA*gagP:3*tatW +NC_000962.3 miniprot mRNA 486052 488622 1366 + . ID=MP000009;Rank=1;Identity=0.3815;Positive=0.5296;Target=sp|O53901|PKS5_MYCTU 16 882 +NC_000962.3 miniprot CDS 486052 488622 1366 + 0 Parent=MP000009;Rank=1;Identity=0.3815;Target=sp|O53901|PKS5_MYCTU 16 882 +##PAF tr|O69709|O69709_MYCTU 131 11 131 - NC_000962.3 699930 656840 657443 171 615 0 AS:i:150 ms:i:150 np:i:79 fs:i:0 st:i:0 da:i:27 do:i:828 cg:Z:33M11D33M6D4M4I7M28D6M40D33M cs:Z::3*gtcL:8*ctgT:4*cggY*atcL*atcK*gaaT*cgcM*aacQ:1*cagA*ctgK:1*tacF*accA:1*ctgV:1*aggA-cgtgcgcggatcggcggcacctgggatctgttc:3*ggcA*gtgI:4*agcD*atcL*ttcH:1*ctgF:1*tttY*cccE*tacF*gagK:2*accQ*cgcH:1*gaaK*ggcA*atcT:1*gacS*ggcA*gccD*cacA:1-cgcgagtacctcaccgac:1*gccV:1*aagR+GRSL*tacA:1*atcG:2*cacT*atcL-gagttcaacagctacgttcgcgcagcggactgggactcatccaccgatacctggaccgtcaccttcgagcagaacggcgtgcac*aagR:1*tacR:1*agcT:1-ttcgtgttcttcggcagcggctactacaactatgacgagggctacacccccgacttcggaggcatcgagaagtttggcggcgcggtagtgcatccccagcactggccagaggatctggac*tacH*accH*ggcE*aagL*aagR*atcM:1*gtgI:10*atcV:1*tcgA*ctgM*accA*gacQ*cggT:1*gaaG*aagA:3*ctgP*cagK +NC_000962.3 miniprot mRNA 656841 657443 150 - . ID=MP000010;Rank=1;Identity=0.2780;Positive=0.3854;Target=tr|O69709|O69709_MYCTU 12 131 +NC_000962.3 miniprot CDS 656841 657443 150 - 0 Parent=MP000010;Rank=1;Identity=0.2780;Target=tr|O69709|O69709_MYCTU 12 131 +##PAF sp|P0CL57|MAZE1_MYCTU 57 0 57 - NC_000962.3 699930 547346 547517 168 171 0 AS:i:298 ms:i:298 np:i:57 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:57M cs:Z:*attM:56 +NC_000962.3 miniprot mRNA 547344 547517 298 - . ID=MP000011;Rank=1;Identity=0.9825;Positive=1.0000;Target=sp|P0CL57|MAZE1_MYCTU 1 57 +NC_000962.3 miniprot CDS 547344 547517 298 - 0 Parent=MP000011;Rank=1;Identity=0.9825;Target=sp|P0CL57|MAZE1_MYCTU 1 57 +NC_000962.3 miniprot stop_codon 547344 547346 0 - 0 Parent=MP000011;Rank=1 +##PAF tr|P95159|P95159_MYCTU 307 0 232 - NC_000962.3 699930 48376 49003 255 699 0 AS:i:347 ms:i:337 np:i:123 fs:i:0 st:i:0 da:i:24 do:i:141 cg:Z:9M1D4M6I28M2I93M4I6M10I1M1I10M1I57M cs:Z:*ctcM*cccT*gttI:1*atcL:1*gtaL:1*ctgI-cag:1*cagN*cacF*gccS+YGTGVE*cccK*catL*tacF*cgcP*gccS:1*cgaI*gacA*gccQ*gtcA:1*cggE*tgcA:1*gacA*atcA:1*gtgY:1*atcS*gctL:1*accV*tggM:3*tttY+QL:1*ctcM*tacL:1*gacT:2*ggcQ:1*cacM*ttcL:1*tgcA*tggY:1*gtcA:3*tggL:1*gagT*caaA:1*tcgE*cacR*atcL*gaaQ*atcL:5*tgcG:1*tccT:2*aatS:1*gagT:3*gacK*atgI*gccI*cgtT:1*gtcL:1*cacV*atcV:1*ggcA:2*ctcA:5*tcgA:2*aaaF*cagE*aagL*gacE*tacH*gacR*gagQ*tacL:1*tacF*cggE:3*gcgF*ggcS*agcD:1*ctcF*gacN*gacR:1*gcgE*gctE:2+QILE:1*cggM*atcV:1*gcgG*cggE+RPTFFGDWYT*cttT+E*ggcS*aagA*ctgM*aacA*ccgE:1*ccgR*acaY:2+R:2*gtgI:7*cgtK:2*ctgF*cgaA*ctgI*gtcA:1*gagR*tatF:2*atcH*tggL*cacN*agcI*tttV*accA:1*gggV:1*agcE*tacL*ctaP*gcgR:1*tcgM*gccR*gtgA:1*agcA*acgA*cacR:1*tcgD*accE*gtcA:2*aacD*ccaR*gcgS:1*atcL*gaaQ*cgcT:1 +NC_000962.3 miniprot mRNA 48377 49003 337 - . ID=MP000012;Rank=1;Identity=0.3648;Positive=0.5279;Target=tr|P95159|P95159_MYCTU 1 232 +NC_000962.3 miniprot CDS 48377 49003 337 - 0 Parent=MP000012;Rank=1;Identity=0.3648;Target=tr|P95159|P95159_MYCTU 1 232 +##PAF tr|P95203|P95203_MYCTU 134 0 134 + NC_000962.3 699930 474939 475341 402 402 0 AS:i:731 ms:i:731 np:i:134 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:134M cs:Z::134 +NC_000962.3 miniprot mRNA 474940 475344 731 + . ID=MP000013;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95203|P95203_MYCTU 1 134 +NC_000962.3 miniprot CDS 474940 475344 731 + 0 Parent=MP000013;Rank=1;Identity=1.0000;Target=tr|P95203|P95203_MYCTU 1 134 +NC_000962.3 miniprot stop_codon 475342 475344 0 + 0 Parent=MP000013;Rank=1 +##PAF tr|P96267|P96267_MYCTU 209 0 209 - NC_000962.3 699930 507134 507761 627 627 0 AS:i:1084 ms:i:1084 np:i:209 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:209M cs:Z::209 +NC_000962.3 miniprot mRNA 507132 507761 1084 - . ID=MP000014;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96267|P96267_MYCTU 1 209 +NC_000962.3 miniprot CDS 507132 507761 1084 - 0 Parent=MP000014;Rank=1;Identity=1.0000;Target=tr|P96267|P96267_MYCTU 1 209 +NC_000962.3 miniprot stop_codon 507132 507134 0 - 0 Parent=MP000014;Rank=1 +##PAF sp|P96285|PKS1_MYCTU 1616 0 444 + NC_000962.3 699930 487371 488706 810 1335 0 AS:i:1327 ms:i:1327 np:i:318 fs:i:0 st:i:0 da:i:267 do:i:1230 cg:Z:38M1D406M cs:Z:*gtgM:2*gggA*aagR*acgS:1*tcgE:2*gctT:6*gggM*cggA*tatH:1*cggQ:1*cggN:1*gcgG:2*gttP*gttI:3*tatC:2*gtgA:1-acg:4*gatE:7*cagA*actS:1*gatE*gagQ:1*ctgI:5*gtgL*gttA:2*cggE:1*gagG:3*gtcA*tgcV:1*gttQ*ggcP*aagG*ccgS*gcgV:3*gctV*tttV:2*gccP:3*tcgA:1*tggR*ctgI:3*agcR:3*gctG*gccE*tacL:4*gagQ:1*ctcF:3*gtgA:8*tatL:8*cacA:1*caaA:3*aatD*accS:14*ctgS*tatF*cggA*ctgV:1*atgR*tcgD:3*cggL:1*ggtD*ttgF:1*ctgM:11*gtcA:2*gcgV:1*tgtT:1*ccgA:6*gccV:15*tttV:2*cagA:1*cgtS:4*gcgE:1*atgL:2*cacE*gatG:1*agcG:3*gtcI:1*ggtA:1*gctE:7*cacQ*gatA:1*gtgA*agcN:5*ctgF*cgcA*ggcA:6*cggQ:9*gcgP:5*atcL*gctE:2*acaA*gccR:3*gaaR*ctgV*tctQ*gtgA*ggcR*ttgE:1*acgQ*atcL*ccgG*gtcL*attV:5*cagE:1*gtgA*gccG*gacP:2*gccG:2*gatQ:2*gccV*cggD:1*atcV:1*gcgR*gtgP:3*ggcA:2*gttA:1*agtH*gccL*cacQ*tgcT*gccL:2*agtT*cgtH:3*gtcA:3*ggcS:3*tcgG*ttgS:2*gcaQ:3*gacP:1*cagE*atcA*gtgM*tcgV:1*cccS*acgM:1*cgcG:5*ccgL*gtcA:1*gtgA*atgL*acgG:2*gccG:1*ggcV:1*gtcT*tcgT:1*atgV*ggcP*ctgV*gatQ:1*gccS*tcgA:2*tccA:1*tacS*cggG*cccG*aagR:2*gagQ:7*catR*caaR*aagR:2*ctcE*gcaT:1*gccG*ccaA*tcgD*gtcG*agcP*gacA*cccD*accA:1*gccG*ggcL*cagG*atcL:2*agcT*gatE +NC_000962.3 miniprot mRNA 487372 488706 1327 + . ID=MP000015;Rank=1;Identity=0.6067;Positive=0.7146;Target=sp|P96285|PKS1_MYCTU 1 444 +NC_000962.3 miniprot CDS 487372 488706 1327 + 0 Parent=MP000015;Rank=1;Identity=0.6067;Target=sp|P96285|PKS1_MYCTU 1 444 +##PAF sp|P9WFB9|VAPC2_MYCTU 141 0 141 + NC_000962.3 699930 364043 364466 420 423 0 AS:i:719 ms:i:719 np:i:141 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:141M cs:Z:*gtgM:140 +NC_000962.3 miniprot mRNA 364044 364469 719 + . ID=MP000016;Rank=1;Identity=0.9929;Positive=1.0000;Target=sp|P9WFB9|VAPC2_MYCTU 1 141 +NC_000962.3 miniprot CDS 364044 364469 719 + 0 Parent=MP000016;Rank=1;Identity=0.9929;Target=sp|P9WFB9|VAPC2_MYCTU 1 141 +NC_000962.3 miniprot stop_codon 364467 364469 0 + 0 Parent=MP000016;Rank=1 +##PAF sp|P9WGT5|SDHL_MYCTU 461 0 461 - NC_000962.3 699930 76239 77622 1383 1383 0 AS:i:2354 ms:i:2354 np:i:461 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:461M cs:Z::461 +NC_000962.3 miniprot mRNA 76237 77622 2354 - . ID=MP000017;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGT5|SDHL_MYCTU 1 461 +NC_000962.3 miniprot CDS 76237 77622 2354 - 0 Parent=MP000017;Rank=1;Identity=1.0000;Target=sp|P9WGT5|SDHL_MYCTU 1 461 +NC_000962.3 miniprot stop_codon 76237 76239 0 - 0 Parent=MP000017;Rank=1 +##PAF sp|P9WHS5|HTPX_MYCTU 286 0 286 + NC_000962.3 699930 653878 654736 858 858 0 AS:i:1439 ms:i:1439 np:i:286 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:286M cs:Z::286 +NC_000962.3 miniprot mRNA 653879 654739 1439 + . ID=MP000018;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WHS5|HTPX_MYCTU 1 286 +NC_000962.3 miniprot CDS 653879 654739 1439 + 0 Parent=MP000018;Rank=1;Identity=1.0000;Target=sp|P9WHS5|HTPX_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 654737 654739 0 + 0 Parent=MP000018;Rank=1 +##PAF sp|P9WIF5|PG33_MYCTU 498 0 498 - NC_000962.3 699930 333504 336310 1011 1570 0 AS:i:1372 ms:i:1542 np:i:378 fs:i:1 st:i:0 da:i:0 do:i:0 cg:Z:98M3I51M9D35M1I49M3D15M1I14M2I12M1I12M4I19M909U11M1D15M1D9M378V36M1D3M2D27M7D20M1F8M1I23M1D13M2I11M cs:Z::4*attV*gcgT*gcgI:2*gttA*atcL:2*gcgV:5*agtG*ctcI:2*agcT:1*agcG*gcgT:6*gccV*aacP:2*gcaT*ctgV*atgL:2*ggcA:5*acaA:1*atcM:4*ggcS*gccG:1*ggcA:10*cagA*gcgL:2*gccE:3*cagR:3*tccA:1*ggcA:1*gccS:7*gcgS*gtgA*tcgA:2+EGV:2*ccgV:2*gagA*ttcP*ttcA:2*aatL*accL:23*tggI:14*gtcM-aacggcggcgccggcggcaacggcggc*gccP:6*ggcA:2*atcF:10*gtcN*gccV*agcA:2*atcT*ggcA:1*tccF:5+A*aacG*gccG*atgL:1*ttcY:10*ggcR*gtaA*gtaG*gccG*ctcG*acgV:2*gccI:9*gccG:6*gccG:1*gtcA:2*gccV:2*ttcL-acgaacggc*agtA:1*ctcD*ggcA:1*gcgD:5*gccD:3+F:1*gccG*accV:2*gtcA:2*tccA:2*gccT:1*agcT+NV*tccT:8*gctN:2+L:6*accV:2*catV:2+DGVA:1*gccL*gacG*agcT*agcA*ttcP:2*gtcP:10*gG~gc906ag-gg*atcV:8*gtcI*tccG-ttg:1*atcV:1*tccN:2*accA:2*aacS:2*aacS*tccA*ataL-ggc*gtcL*gctW:1*atcD:5*cgA~cg375ag-c:2*gccV*agcG:1*cttT*gccT:5*accA:3*ggcA*gccG:2*ttcV:1*ttcA*cgcG:6*gggA*cacL:2*gcaG:1-ctt:1*agcG*atcV-cagcaa:5*gccN:2*aacT*ggcA:5*tccA*gccG:4*gccF:1*ggcF*agcG:2-aacgctctaggcgccggtacc:2*accA:2*gacL:2*cacK:2*gtgL*ttcI:1*aacD:5-t:3*tttN:1*gccT:1*accA+K:2*agcD:2*gtcA:2*aacG:1*gtgI:1*atcV:10-aaa*gccS:1*gccT*acgP*cccN:1*gccS*ggcA:4*ctgA+GG:3*gagK:2*ctcM:4 +NC_000962.3 miniprot mRNA 333502 336310 1542 - . ID=MP000019;Rank=1;Identity=0.6439;Positive=0.7223;Frameshift=1;Target=sp|P9WIF5|PG33_MYCTU 1 498 +NC_000962.3 miniprot CDS 335359 336310 1018 - 0 Parent=MP000019;Rank=1;Identity=0.6667;Donor=GC;Target=sp|P9WIF5|PG33_MYCTU 1 317 +NC_000962.3 miniprot CDS 334338 334452 109 - 2 Parent=MP000019;Rank=1;Identity=0.5789;Donor=CG;Target=sp|P9WIF5|PG33_MYCTU 318 353 +NC_000962.3 miniprot CDS 333502 333962 415 - 1 Parent=MP000019;Rank=1;Identity=0.6116;Frameshift=1;Target=sp|P9WIF5|PG33_MYCTU 354 498 +NC_000962.3 miniprot stop_codon 333502 333504 0 - 0 Parent=MP000019;Rank=1 +##PAF sp|P9WIJ3|DEF_MYCTU 197 0 197 - NC_000962.3 699930 517805 518396 591 591 0 AS:i:1042 ms:i:1042 np:i:197 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:197M cs:Z::197 +NC_000962.3 miniprot mRNA 517803 518396 1042 - . ID=MP000020;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WIJ3|DEF_MYCTU 1 197 +NC_000962.3 miniprot CDS 517803 518396 1042 - 0 Parent=MP000020;Rank=1;Identity=1.0000;Target=sp|P9WIJ3|DEF_MYCTU 1 197 +NC_000962.3 miniprot stop_codon 517803 517805 0 - 0 Parent=MP000020;Rank=1 +##PAF sp|P9WJX7|CHLEP_MYCTU 413 0 413 + NC_000962.3 699930 222288 223527 1239 1239 0 AS:i:2066 ms:i:2066 np:i:413 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:413M cs:Z::413 +NC_000962.3 miniprot mRNA 222289 223530 2066 + . ID=MP000021;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJX7|CHLEP_MYCTU 1 413 +NC_000962.3 miniprot CDS 222289 223530 2066 + 0 Parent=MP000021;Rank=1;Identity=1.0000;Target=sp|P9WJX7|CHLEP_MYCTU 1 413 +NC_000962.3 miniprot stop_codon 223528 223530 0 + 0 Parent=MP000021;Rank=1 +##PAF sp|P9WKI1|INO1_MYCTU 367 0 367 - NC_000962.3 699930 50023 51124 1101 1101 0 AS:i:1878 ms:i:1878 np:i:367 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:367M cs:Z::367 +NC_000962.3 miniprot mRNA 50021 51124 1878 - . ID=MP000022;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKI1|INO1_MYCTU 1 367 +NC_000962.3 miniprot CDS 50021 51124 1878 - 0 Parent=MP000022;Rank=1;Identity=1.0000;Target=sp|P9WKI1|INO1_MYCTU 1 367 +NC_000962.3 miniprot stop_codon 50021 50023 0 - 0 Parent=MP000022;Rank=1 +##PAF sp|Q6MX50|PG05_MYCTU 591 0 591 + NC_000962.3 699930 361333 363106 1770 1773 0 AS:i:3134 ms:i:3134 np:i:591 fs:i:0 st:i:0 da:i:90 do:i:0 cg:Z:591M cs:Z:*gtgM:590 +NC_000962.3 miniprot mRNA 361334 363109 3134 + . ID=MP000023;Rank=1;Identity=0.9983;Positive=1.0000;Target=sp|Q6MX50|PG05_MYCTU 1 591 +NC_000962.3 miniprot CDS 361334 363109 3134 + 0 Parent=MP000023;Rank=1;Identity=0.9983;Target=sp|Q6MX50|PG05_MYCTU 1 591 +NC_000962.3 miniprot stop_codon 363107 363109 0 + 0 Parent=MP000023;Rank=1 +##PAF sp|Q79FH3|PPE37_MYCTU 473 0 473 - NC_000962.3 699930 307894 309547 585 1455 0 AS:i:686 ms:i:730 np:i:257 fs:i:0 st:i:0 da:i:0 do:i:15 cg:Z:188M3I4M5I11M6I3M1I31M2D1M282U7M1D6M3D28M3I20M1D52M3D4M1D24M2I8M5I5M2I32M1D21M cs:Z::2*gccF:1*atcM:1*atgF:1*tcgV:4*cacP:2*ctgW:2*agcT:1*cctM:6*gtgA*tcgA:1*gagR*gggA:2*tcgA:1*agcA*atcA*gccQ:1*gcgT:1*acgI:1*gacT:3*gcgS*ctgV:6*ggcS*accS:1*gacQ:2*accS:1*gcgD*gttR*tacF:1*gccV:2*accQ:1*tatF*ctgR*gcgY:2*gtgT*cagH:1*agcA*gctT*aacV*agcA*gcgT:1*atgA:1*accA*cggA*caaH:4*accA*gccG:1*ggcT*accS:2*gccG*gcgG:7*ggcA:4*ctcM:2*gtgA:1*atgV*gcgT:5*atcV:9*tccA:2*gcgL:8*acgV:1*gccS*agcH:4*tcgA*accH*gcgE*gcgS:3*gcaT:1*cagS:1*accP:6*aaaT*gccS*aacA:1*ccgS*acaS:3*gacS+SFP*gagD:1*aacT*caaK+LILQL*gtcL*cagK*gaaD*tggF:1*caaE*tggL:1*cagR*aagY*atcL+AVELLP:1*tatP*accL+G:1*ttcL*tacI*aacA*aacQ:1*ataL*caaD*ccgW:2*aacS*tggF*ctgV*accS*aacG*ctcP*cccV:1*ttgT*caaF*gcgL*atgA*tttY*tccL*ggaV*tttL:2*tggL*ctgI-ccctcg*ctgY*gF~gt279ag-cc*gccG:1*ctgF:4-ctt*gccS:1*gcgV*agtL*gcaL*gcaP-ggcggcttc:3*tctT:5*gttG*ggcA*atcV*ccgS*ccaG*tccP:1*ccgG:1*gtcM*atcV*ccgE*ccgR:1*gcgH*gcgS*attD*gccG:1+SRQ:1*atcW:1*accA*cccA:1*ccaG*actV*ccaT*gccL*ccaV*gccG*ccgT*gccN:1*acgA:1*gtgL*accV*gcgT-ccg:2*ccgA:1*gggA:1*ccaT*ccgT*ccgS*ccgA*gtgA*accP*gccT*ccgA:1*ccgS*gtgT*accP:1*gccS*ggcS*ataA*caaA*agcQ*ttcG*gggL:1*ctgA:2*gacG*ctgP*aacD*tcgG*gcgE*gcgG*cagF*gccN*aggP*aagI:1*gtcK*ggcT:1*ggcA*gttL*cgaA*aagG*aagV:1*ccgT*gaaD-cccgacagc:1*gagA:2-gcg:2*gcgK*gcgL:1*gagG*gaaD:1*gttA:1*ccgS*cagS*cggA*cgtS*cggK*cggA*ccaT*aagR*atcL*aaaR*cagR*ctcR*ggcL:1+QH*ggtR*tacF:1*tacF:1*gatA*ttaD:1+GRLTM:1*gaaN:1*ggcP*cacE+MA:1*ccgV*acgA*ggtA*tcgG*cctN*caaR:1*gcgL*ggaD*accA:6*accI*cacP:1*gccS*agtA:2*caaS*gtcA*gcaT:2*atcT*acgH:1-ccc*aacG*gacG*gcgG:1*ggcA*ggcD*agcV*ccaL*cgcS*acgQ:2*atgL:1*ggaH:3*accG*gacS*tcaD +NC_000962.3 miniprot mRNA 307895 309547 730 - . ID=MP000024;Rank=1;Identity=0.4021;Positive=0.5299;Target=sp|Q79FH3|PPE37_MYCTU 1 473 +NC_000962.3 miniprot CDS 308827 309547 568 - 0 Parent=MP000024;Rank=1;Identity=0.4883;Target=sp|Q79FH3|PPE37_MYCTU 1 253 +NC_000962.3 miniprot CDS 307895 308547 162 - 2 Parent=MP000024;Rank=1;Identity=0.3057;Target=sp|Q79FH3|PPE37_MYCTU 254 473 +##PAF sp|Q79FH3|PPE37_MYCTU 473 0 473 + NC_000962.3 699930 349934 351410 624 1515 0 AS:i:750 ms:i:750 np:i:271 fs:i:0 st:i:0 da:i:0 do:i:63 cg:Z:203M7D33M5D23M1D11M1D7M8D7M1D10M3I7M1D11M3I3M2D9M1I5M2I11M1I16M3I27M4D59M1D15M1D3M cs:Z::1*gccT*gcgF:1*atcM:1*atgF:1*tcgV:4*catP:2*ttgW:2*aatT:1*ccgM:3*tcgP:1*gtgL:3*acgR:2*agcH*cagA:1*agtA:1*gagQ:1*gccT*tcgE*acgI:1*gcaT:2*agtA*gggS*ctaV:1*gggA:2*cctQ*ggtA*tggS*gcaS:6*gagD*tggR*tacF:1*gccV:2*ttgQ:1*tatF*gtgR*gcgY:3*cagH:1*agtA*gcgT*gatV:1*gcaT*ggaA:3*cagA:2*gccT:3*gccG:2*actS:2*gcaG*gccG:11*gtgA*attM:1*accG*gtgA:2*gcgT:5*atcV:5*acgA:6*gtgL:3*ttgI:3*gccT:2*ggtS*cttH:3*gctV*tcgA*ggtH*gcgE*gcaS*ctgV:1*tcgA*gcgT:1*cgcS:1*gtcP:3*acgQ*gttI*atgV*aatT*ccaS*ggtA*ggcA*ggtS*gcgS:1*agcA*actS*gtcS*gggS*gcgF*gtcP*aacD:1*tggT*cagK*tggL*ctcI:1*gcgQ:2*caaK*cagD-ctctggaacgcctacacgggt:1*tacL*gggE*tggL*atgL*ttgR*cagY:1*atcA*tggV*cagE*ttcL:1*cagP*gatG:1*attL:1*aacD*tcgL:1*aagA*atcQ*atcV*atcL*gccD*ttcW*ctcF*acgI*aatS*cccF*attV*cagS-gcactgatcacttac:2*ctgV*ttgF*ttcT*gcgF:1*ggcA:1*cagL*attV*ttcL*ttcD*aacP:1*gtcI*ggcY*tggF*ccgG*accP*tggF*ggcA*atgP-atc:1*agcT:2*ttcV:6-ggg*ctgT:3*gcaG*ataL*gccG-tttctacctattgtgcttgcgccc:2*attS*ccgG:2*agtG-act:1*ctgM*gctV*gctE*gccR*gccV*gtcH*gccS*gccD:1+PSR*tcgQ*gtgS:3*gtcA*agcT-atg*gccG:2*gggL*gcgV:2*gctN*gggP:2+LVT:3-gcgggc*gcgP:2*tctT*gcgT*ggcS:3+T:2*gcaS*gctT:1+GS*gcgS*accA:1*agtQ*ttcG*gccL:5+P*agcD:1*gatE*tggG*gggF*ccgN*agcP*ttgI*gggA*ccgK:1*gtaT*ggtA*ggtL*cgcA:1+VTT*ggtD*atcA*aagA:4*acgK*gttL:1*gcgG*gcgD*gccQ:1*gcgQ*gcgS*gcaS*actA*cgtS*gggK*cagA*tcgT:1*gcgL:3-cggcggtctgaa:2*gacQ*tacH*ggcR*gacF:3*gacA*atgD:1*tccG*gatR*agcL*ggtT*ttcM*ggcP*cccN*tcgT*acgP*ggcE*gacM*cacA*ggcD*gcgV*cagA:1*tccG*gaaN:2*gccL*gggD*acgA:6*gcaI*accP:1*gaaS*cgcA*cggP*gtcG*cggS:1*gtcT:3*gcaH:1*gccG:1*gatG-gag:1*ggcA*aacD*ggcV*cccL*cggS*atgQ:2*gtgL:1*gggH:2*gagD-cag:2*aacD +NC_000962.3 miniprot mRNA 349935 351410 750 + . ID=MP000025;Rank=2;Identity=0.4119;Positive=0.5366;Target=sp|Q79FH3|PPE37_MYCTU 1 473 +NC_000962.3 miniprot CDS 349935 351410 750 + 0 Parent=MP000025;Rank=2;Identity=0.4119;Target=sp|Q79FH3|PPE37_MYCTU 1 473 +##PAF sp|Q79FK6|PPE26_MYCTU 393 0 393 - NC_000962.3 699930 466872 532205 489 1221 0 AS:i:502 ms:i:568 np:i:209 fs:i:1 st:i:0 da:i:-1 do:i:-1 cg:Z:31M64201U2D132M1G6M2I53M19I26M7D23M4I10M3D23M2I30M2D27M1I2M cs:Z:*ccgM*catD:1*gcgG*tggA:4*atcV:2*gcaV*ctgR:1*tttY:5*ggaA:1*ctaM*attV:3*accS:2*gN~gc64198ag-cc-tggcaa*cggG:2*aacA:2*accS*gcgS*acgA:1*gctT*tccG:1*tccE*tcgT:2*tccT*gggQ:1*accS*ggcS*gatE*gacG:4*tcgA*gcaS*ctgA*tcgA:2*gccE:1*gccV*gtcA:6*aggS:1*accA:2*tcgQ:5*gctT:2*gtgR:3*aacA:1*tacF:1*tcgA:1*tacF:6*acgP*gtaL:5*cgcA*acaS*atgL*ctgM*tcaQ:1*gtcI*cagS:8*ccgS:3*actA*agtA:1*acgA*cacQ:6*catQ:1*atcS*ttgA:2*gacY*ggcA:3*gccS:1*gggA*gccS:2*cagA*ttgV*cT*gccP*gttF*cacS*ccgT:2+QI:1*accN*accP*agcT*gggA*gccQ:1*tcgT*ctgQ*agtA*gacA:1*gccV:4*cagG*gcgT*gtaA*gtaQ*ccgS*gccT*gccL*gcgT*gcgE*accM*gacI*gtgT*agcG:1*ctaP*ccaN*accA:3*ttcL*ctaT*ccgS:1*cccL*ttcL*gacQ*gccS*attS*ccgN*aacG:1*atcL*gagS*gatW:1+WQILFGTPNFPTSISALLT:1*gttL*ctcQ*gtaP*gccY:1*gctS*gtaF*gccF*gtcY*gcgN*gctT*ggcE*agtG:1*gggP*gtaY*tcgF*gcgS*gcgI*cagG*ctcM:1*gagN*atcN*tacF-cgccacgacgtggtcgacgag*gccI:1*aagS:1*ccgK*catT*tgcL*ccaG*gccL*gaaI*tccG*gacS*cagA*acaA:2*gggA*gccV:1*ggtA*gacA:2+AAKG:2*gagG*gtcL:2*cggM*gtcL*accG*agcG-ccgccacag*ccgG:4*ctcG*accL:1*tacN*tccA:1*aacS*atcV:1*ggaK:4*cacP*agcV:1*aatS+GP:2*ccaG*gcgS:1*cgcT*caaP*gttG:2*atgP*ttcL:1*ggcV*gcgS:1*ccgV*atgS*tatA*atgA*acgP*gggE*agtA*tcgA*gacP:2*tacL*gccL:1-ctggca*gcgG*gcgL*ggtP:3*accA:1*ctgG:2*cttA*gccG*gccP:1*ggtY:1*tccF*gcgR:2*ccgV*gctM:1*gccR*gccP:1+F:2 +NC_000962.3 miniprot mRNA 466873 532205 568 - . ID=MP000026;Rank=1;Identity=0.4005;Positive=0.5135;Frameshift=1;Target=sp|Q79FK6|PPE26_MYCTU 1 393 +NC_000962.3 miniprot CDS 532112 532205 107 - 0 Parent=MP000026;Rank=1;Identity=0.5938;Donor=GC;Target=sp|Q79FK6|PPE26_MYCTU 1 31 +NC_000962.3 miniprot CDS 466873 467913 461 - 2 Parent=MP000026;Rank=1;Identity=0.3840;Frameshift=1;Target=sp|Q79FK6|PPE26_MYCTU 32 393 +##PAF sp|Q79FK6|PPE26_MYCTU 393 0 393 - NC_000962.3 699930 466872 468001 498 1215 0 AS:i:606 ms:i:606 np:i:213 fs:i:1 st:i:0 da:i:0 do:i:198 cg:Z:164M1G6M2I53M19I26M7D23M4I10M3D23M2I30M2D27M1I2M cs:Z::9*atcV:2*gccV:1*atcM:1*tccA:4*aggA:1*ctgM*atgV*caaA:2*gcaS:2*caaN*cggG:2*aacA:2*accS*gcgS*acgA:1*gctT*tccG:1*tccE*tcgT:2*tccT*gggQ:1*accS*ggcS*gatE*gacG:4*tcgA*gcaS*ctgA*tcgA:2*gccE:1*gccV*gtcA:6*aggS:1*accA:2*tcgQ:5*gctT:2*gtgR:3*aacA:1*tacF:1*tcgA:1*tacF:6*acgP*gtaL:5*cgcA*acaS*atgL*ctgM*tcaQ:1*gtcI*cagS:8*ccgS:3*actA*agtA:1*acgA*cacQ:6*catQ:1*atcS*ttgA:2*gacY*ggcA:3*gccS:1*gggA*gccS:2*cagA*ttgV*cT*gccP*gttF*cacS*ccgT:2+QI:1*accN*accP*agcT*gggA*gccQ:1*tcgT*ctgQ*agtA*gacA:1*gccV:4*cagG*gcgT*gtaA*gtaQ*ccgS*gccT*gccL*gcgT*gcgE*accM*gacI*gtgT*agcG:1*ctaP*ccaN*accA:3*ttcL*ctaT*ccgS:1*cccL*ttcL*gacQ*gccS*attS*ccgN*aacG:1*atcL*gagS*gatW:1+WQILFGTPNFPTSISALLT:1*gttL*ctcQ*gtaP*gccY:1*gctS*gtaF*gccF*gtcY*gcgN*gctT*ggcE*agtG:1*gggP*gtaY*tcgF*gcgS*gcgI*cagG*ctcM:1*gagN*atcN*tacF-cgccacgacgtggtcgacgag*gccI:1*aagS:1*ccgK*catT*tgcL*ccaG*gccL*gaaI*tccG*gacS*cagA*acaA:2*gggA*gccV:1*ggtA*gacA:2+AAKG:2*gagG*gtcL:2*cggM*gtcL*accG*agcG-ccgccacag*ccgG:4*ctcG*accL:1*tacN*tccA:1*aacS*atcV:1*ggaK:4*cacP*agcV:1*aatS+GP:2*ccaG*gcgS:1*cgcT*caaP*gttG:2*atgP*ttcL:1*ggcV*gcgS:1*ccgV*atgS*tatA*atgA*acgP*gggE*agtA*tcgA*gacP:2*tacL*gccL:1-ctggca*gcgG*gcgL*ggtP:3*accA:1*ctgG:2*cttA*gccG*gccP:1*ggtY:1*tccF*gcgR:2*ccgV*gctM:1*gccR*gccP:1+F:2 +NC_000962.3 miniprot mRNA 466873 468001 606 - . ID=MP000027;Rank=2;Identity=0.4099;Positive=0.5259;Frameshift=1;Target=sp|Q79FK6|PPE26_MYCTU 1 393 +NC_000962.3 miniprot CDS 466873 468001 606 - 0 Parent=MP000027;Rank=2;Identity=0.4099;Frameshift=1;Target=sp|Q79FK6|PPE26_MYCTU 1 393 +##PAF sp|Q79FU0|PG18_MYCTU 457 0 457 - NC_000962.3 699930 674619 675916 669 1438 0 AS:i:853 ms:i:853 np:i:262 fs:i:1 st:i:0 da:i:0 do:i:441 cg:Z:95M2I77M3I30M10I28M4D16M7D6M7D37M4I9M1F32M6I10M1I20M10I12M4D6M4I21M7I11M cs:Z::4*atcN*gcgV*acgA:1*gagQ*atgL*ctgV*accS:3*acgA:1*ttgA:1*aaaR:3*acgA:1*actN*gcgT:7*gtgT*gcgT*aaaQ:2*cccA:1*tcaA*gccH:4*gtgT:1*gttI:5*acgS:1*gccG:1*gaaH:2*accA*gtcI:5*acgA*tttY*catQ*gacE:3*cagL*accA:2*gcgQ:1*gcgS:1*tcgT:1*gtgA*gccV:3*gtcA*aacS*gttA*gaaT+PL:1*agtN*ttgV:1*gccD:1*gtcI:3*accV:1*gcgS:1*ttcT:6*aacD:2*gacN:1*tccI*cccD:7*ccaN:2*atcW:1*tacW:13*cgaA:14*aacA:5*gtgQ:1+LPF*accE*accA:1*gggA*gccN:2*cacA:7*tatF:7*tttV:4*gcgG*gtcA+GTTFGVAGGD:2*aacT:2*gccV:2*accH*gccG:2*ttcI:4*gccH:2*gccD:2*aacT:1*atcG*gccT:1-gtcacgggtacg*tcgG:1*agcV*acaS*ccgL*ggtA*ggaR*tccA:8-atcggcggcaacggcggggcc:1*gggP:3*gtgI-ctgatgggcaacggcggcaac:5*gagV:2*cccA:3*ggcA:2*ggcV*gccT*agcT*ggcI*gccT:2*accS*aacF*ttgN*ggcD*gctP*gacH:1*caaV:1*ggcV*ggaN*aacP:3+IYVT*ggtN*gggQ*gctG*ggcS*gggN:1*ggcV*gggS:1-g*gcgI*ggcD:1*gcgV*gcgT*gccN:2*tgcT*tcgG*gccS*tcgI*gcgT*gcaD*gccG*acgN*gcgG:1*gcgS:1*ctgV:2*gcgS*gcgP:2*gcgG*gagL*ctcV*ccgF:1+TNFDSN:1*gcgV*gcaS*acgV*gcgI*ctaD:1*ggaN*cgtT*gggN+T:2*accG*ttgS*gtgI:1*gcgV:1*ccgT*gtgG:1*atgY*gcgG*gcaV*accA*cggV*gcgN:1*gtgG:1+NIYVTNQFSN*ccgT:1*gcgS*ccgV*gtgI*gcgD:2*tcgT*gcgN*gcaT*gcgV-cgcatggcgcga:1*gcgG*cgcS:1*gcaI:1+VGLD:1*ccaT*ccaG*gcgV*gtgA:1*acgN*gcgP*gcgV:1*gcgG*gcaV*aagV*gcgY*ccgV:1*ctaN:1*gcaL*gcgD:1+TVSVITG*agaE:3*acgS:1*gcaC*gggS*gtgA:1*acgI +NC_000962.3 miniprot mRNA 674620 675916 853 - . ID=MP000028;Rank=1;Identity=0.4652;Positive=0.5466;Frameshift=1;Target=sp|Q79FU0|PG18_MYCTU 1 457 +NC_000962.3 miniprot CDS 674620 675916 853 - 0 Parent=MP000028;Rank=1;Identity=0.4652;Frameshift=1;Target=sp|Q79FU0|PG18_MYCTU 1 457 +##PAF sp|I6Y3P1|LPRN_MYCTU 384 0 351 + NC_000962.3 699930 204097 205129 360 1053 0 AS:i:480 ms:i:480 np:i:184 fs:i:0 st:i:0 da:i:3 do:i:105 cg:Z:5M1I69M5I47M1I223M cs:Z:*cgcM*cacN:1*gccI:1+L*cagR*gggA*ctgI*gtgI:1*ctgT*gtgA*ctcS*gcaS*ctcA:2*agtA*tcgG:1*ggcQ*tggF*cgcG:1*atcL*tccN*aatS*gtgL*gcgP*atcL:2*ggcT*ccgA:1*accH:1*ccgE:1*tccA:1*accS*atcV*tacT:1*cagE:1*ccgA:1*acgV*ttgA*gcgT*atcL*aacP*ggcQ:2*cggP:3*gccD:2*tggT:3*atcV*cgcA*gcgG:1*aagV*ttgA+VQRPD*aagG*aacS*tggF*gtgY:1*acgA*ctgV*acgK:1*agcD:1*aagD:1*gacN:1*acgL:2*aaaA:2*accV:2*atcV*gggS:7*cagL:5*gcgP:1*ccaT:1*ccgR*tcgP:1*gtgT+G*ccgR:1*aagV:2*gacS*accR:1*ccgT*ttgE*aagA*cgcN*tccT*tcgD*gccR*tatF:4*cagE*acgV*ctgF*gccS*agcA*atcL*gccG*accV*ttgV*ttgV*cgcN*ggcK:1*ggcN*ctgV*gtgG*aacA:2*gggE:1*cagI*caaD:1*atcT*aacH*gccQ*atcA:1*acgA:2*gcgQ*gacA:1*atcF*cggV*gccN*tttL*cttV*ggcP*aagR:1*gacA*accE*ttcL:1*gacA*gagG:2*cagR:1*cgcV*gatH:2*accI*cgcD:1*attL:1*tccG*accL:2*ttgV*ttgS:1*tatI*gtgL*ggcA*ggtR*cgtD*tcgK*gaaD*gtcN:1*aatG:1*gtgA:1*accD*gacT:2*ccaD*ttgA*atcV*aagR*cacV*tttL*gcgN*gatQ*aagN*cagR*gaaD*ctgH*ttgI*atcV*aacD:1*tccF*gatA:1*gtaL*ggcK:2*agcT*cagM*tccV*gccT*gacS*cagH*tatV:1*tcgA*gctE*gccT*cggK*ggcV:1*ctgF*cacG*cagE:2*cagK*gcgD:1*caaY*tgcS*ccgI*ctcV:1*gaaA:1*cgtN*cgaD*gccD*gctR*ccgK*tatD*ctgF:1*ggtT*gcgS:1*aaaQ:1*atcL:2*cagF:2*gacP*gtcN*gacF*accG*gtgI*ccgK:1*ctgA:5*atgL:1*ttgV*tcgF*ctgT:1*ctgF:3*tacL*agcR*gccR:1*gacG*aatE*gcgT:1*cttF:1*gggT*accA*ggaY:1*tccD*ggtP*gcgN*ttgM*cgcA*gccH*ctcM*gagD*cagE +NC_000962.3 miniprot mRNA 204098 205129 480 + . ID=MP000029;Rank=1;Identity=0.3419;Positive=0.5242;Target=sp|I6Y3P1|LPRN_MYCTU 1 351 +NC_000962.3 miniprot CDS 204098 205129 480 + 0 Parent=MP000029;Rank=1;Identity=0.3419;Target=sp|I6Y3P1|LPRN_MYCTU 1 351 +##PAF tr|I6Y6S3|I6Y6S3_MYCTU 187 0 187 + NC_000962.3 699930 57409 57970 558 561 0 AS:i:955 ms:i:955 np:i:187 fs:i:0 st:i:0 da:i:75 do:i:0 cg:Z:187M cs:Z:*gtgM:186 +NC_000962.3 miniprot mRNA 57410 57973 955 + . ID=MP000030;Rank=1;Identity=0.9947;Positive=1.0000;Target=tr|I6Y6S3|I6Y6S3_MYCTU 1 187 +NC_000962.3 miniprot CDS 57410 57973 955 + 0 Parent=MP000030;Rank=1;Identity=0.9947;Target=tr|I6Y6S3|I6Y6S3_MYCTU 1 187 +NC_000962.3 miniprot stop_codon 57971 57973 0 + 0 Parent=MP000030;Rank=1 +##PAF tr|L7N6B3|L7N6B3_MYCTU 383 0 383 - NC_000962.3 699930 191986 193135 1146 1149 0 AS:i:1964 ms:i:1964 np:i:383 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:383M cs:Z:*gtgM:382 +NC_000962.3 miniprot mRNA 191984 193135 1964 - . ID=MP000031;Rank=1;Identity=0.9974;Positive=1.0000;Target=tr|L7N6B3|L7N6B3_MYCTU 1 383 +NC_000962.3 miniprot CDS 191984 193135 1964 - 0 Parent=MP000031;Rank=1;Identity=0.9974;Target=tr|L7N6B3|L7N6B3_MYCTU 1 383 +NC_000962.3 miniprot stop_codon 191984 191986 0 - 0 Parent=MP000031;Rank=1 +##PAF tr|L7N6C0|L7N6C0_MYCTU 101 0 101 + NC_000962.3 699930 612597 612900 303 303 0 AS:i:522 ms:i:522 np:i:101 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:101M cs:Z::101 +NC_000962.3 miniprot mRNA 612598 612903 522 + . ID=MP000032;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N6C0|L7N6C0_MYCTU 1 101 +NC_000962.3 miniprot CDS 612598 612903 522 + 0 Parent=MP000032;Rank=1;Identity=1.0000;Target=tr|L7N6C0|L7N6C0_MYCTU 1 101 +NC_000962.3 miniprot stop_codon 612901 612903 0 + 0 Parent=MP000032;Rank=1 +##PAF tr|O07169|O07169_MYCTU 525 0 525 + NC_000962.3 699930 144048 145623 1575 1575 0 AS:i:2669 ms:i:2669 np:i:525 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:525M cs:Z::525 +NC_000962.3 miniprot mRNA 144049 145626 2669 + . ID=MP000033;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07169|O07169_MYCTU 1 525 +NC_000962.3 miniprot CDS 144049 145626 2669 + 0 Parent=MP000033;Rank=1;Identity=1.0000;Target=tr|O07169|O07169_MYCTU 1 525 +NC_000962.3 miniprot stop_codon 145624 145626 0 + 0 Parent=MP000033;Rank=1 +##PAF tr|O07411|O07411_MYCTU 554 0 554 + NC_000962.3 699930 194992 196654 1659 1662 0 AS:i:2831 ms:i:2831 np:i:554 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:554M cs:Z:*ttgM:553 +NC_000962.3 miniprot mRNA 194993 196657 2831 + . ID=MP000034;Rank=1;Identity=0.9982;Positive=1.0000;Target=tr|O07411|O07411_MYCTU 1 554 +NC_000962.3 miniprot CDS 194993 196657 2831 + 0 Parent=MP000034;Rank=1;Identity=0.9982;Target=tr|O07411|O07411_MYCTU 1 554 +NC_000962.3 miniprot stop_codon 196655 196657 0 + 0 Parent=MP000034;Rank=1 +##PAF tr|O07775|O07775_MYCTU 103 0 25 + NC_000962.3 699930 699855 699930 75 75 0 AS:i:117 ms:i:117 np:i:25 fs:i:0 st:i:0 da:i:0 do:i:-1 cg:Z:25M cs:Z::25 +NC_000962.3 miniprot mRNA 699856 699930 117 + . ID=MP000035;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07775|O07775_MYCTU 1 25 +NC_000962.3 miniprot CDS 699856 699930 117 + 0 Parent=MP000035;Rank=1;Identity=1.0000;Target=tr|O07775|O07775_MYCTU 1 25 +##PAF tr|O53537|O53537_MYCTU 317 0 314 + NC_000962.3 699930 75300 76203 462 954 0 AS:i:625 ms:i:614 np:i:197 fs:i:0 st:i:0 da:i:0 do:i:6 cg:Z:107M1I47M1D38M1I21M5I1M2I4M3I12M1I37M4I13M3D17M cs:Z::1*accA:1*tggD*actL*gccV:1*gacT*attV:2*cagL*accS:1*cggK*accL:1*gtcI:5*accS:4*gagG*accL:1*gcaR*gcgR:1*gccS:1*catA:2*cacD:1*gtgI*ctgM:1*gtgI:2*ctcR*gacA:2*aagE*cagA:1*gcgV*gcaE*cgcE:1*accR*gagT:1*accV:1*ggcD:1*gaaK*gtaL*gagT*cttI*cagK*gagA:3*accS:5*cgcA:1*gccL*gcgG*gcaE:2*aagM*tctA:1*cacG*cagR*cgcP:11*tatT*acaP:1+E:1*cagV:7*atgL:3*accS:9*ggcA*ctgH:1*attL*gatP*cgaL:1*ctgR*cccA*gtcA*gccQ*ggtR*tcaA:3*accS*atcL:2*gtcL*ggcA*catA:1-atc:1*gccG*gcaR:7*tggF:2*cggS:1*aggA*cggP*gtcM*gccT:4*gccS:3*aacV:1*ctgM:1*actA*tatR:2*cagD:2+S*ttaR:1*ccgA:1*ggaW*accG*accI:1*gcgS*gtcN:1*tcgA:3*gtgL*tccT*aacK:1*gaaN*gtgL+QIAGP*gtcS+HG:1*aacD*atgK:1+ALM*cggE*ccgR:1*gtcY*gcgK*gtgT*gcgS*gccW*ataR*ctgF:2+F:1*atgW:1*gacE*gccI:1*ctgE:1*gccI:2*acaA:1*cgtY:2*accA*gatT:1*gcgQ*gtgA*cgcD:2*cagA*tacF*ttcY:2*gatR:1*ttcR*ggtY:1*ataV*cggA:1+GGVR*tacE*ccgA:2*gtgP:1*tccA*agcA*gccR*cagN*tctD*cacA:1-gagcagctg*cagS*cgcK:3*gctE:3*gagQ:4*gtcS:2 +NC_000962.3 miniprot mRNA 75301 76203 614 + . ID=MP000036;Rank=1;Identity=0.4843;Positive=0.6195;Target=tr|O53537|O53537_MYCTU 1 314 +NC_000962.3 miniprot CDS 75301 76203 614 + 0 Parent=MP000036;Rank=1;Identity=0.4843;Target=tr|O53537|O53537_MYCTU 1 314 +##PAF tr|O53641|O53641_MYCTU 214 0 214 + NC_000962.3 699930 186784 187426 642 642 0 AS:i:1102 ms:i:1102 np:i:214 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:214M cs:Z::214 +NC_000962.3 miniprot mRNA 186785 187429 1102 + . ID=MP000037;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53641|O53641_MYCTU 1 214 +NC_000962.3 miniprot CDS 186785 187429 1102 + 0 Parent=MP000037;Rank=1;Identity=1.0000;Target=tr|O53641|O53641_MYCTU 1 214 +NC_000962.3 miniprot stop_codon 187427 187429 0 + 0 Parent=MP000037;Rank=1 +##PAF tr|O53968|O53968_MYCTU 342 6 342 + NC_000962.3 699930 688043 689059 468 1020 0 AS:i:687 ms:i:687 np:i:211 fs:i:1 st:i:0 da:i:12 do:i:0 cg:Z:65M1D48M1I138M2G42M1D20M2D21M cs:Z::1*acaV*actV*atcV*aaaR:2*atcV*gtcF*tggL*ttgA:1*ctgC*tcgL*gtgL*ttcT*accA*gtgF*atgL*atcL:1*gtgA:3*cagE:3*catG*cacD*accG*accK*gggT:1*tccY:1*gtgE:1*accA*catN:2*gggN:2*gccT:1*caaK*tttL:2*gctI:8*gccT*aagR*gtaI*acgS-ctg:1*gacN*gggP:1*aagA*caaT:1*ttgR:1*gacQ:2*gtgA:1*cgcN:1*ctgV*tcaT:1*gatT*cagR*gcgG:1*accR:1*tcgV:3*ctcD:2*atcF:5*gagA:1*ggcE*cgcE:1*cacA*agcG:1*cagL*cggA+V:1*gcgR:2*gccH:4*gagA*cacR:1*catQ:8*ctcI:3*cgcK:3*caaR*acgA:1*gacN:1*gacE*aagQ:2*agcA*atcL*gccS*tccE*tcgQ*atcL*atcL*accH*gtgA:1*caaA:3*gccP:2*aacG*gacS*atcL:1*gacA:1*accS:1*tcgA*ctgV:1*gcaN:6*catR*gcgL:2*gagQ:1*gtcI*aacT:3*accV:2*gccG*accS*accL*gtcG*aagA:1*caaT*acgD*gaaR*ttcL:1*cgcQ*acgA:1*gacT*aagS:1*gagS*gtgA:2*actH*ggaR:1*aagA*aacQ:1*gcgK*gacT*ccgD*ctgI*gccS*gcgN:1*gcgV:1*cacY*atcT*agcN*agcA:3*accS*ctaV:4*gggS*cggQ*atA:1*ccaA*ttgP:1*cacA*agcK*agcV*ttcV*gggR*cacE*ctcT*gagD*ggcR*atcV*cagA*cagG*ccgI*ctcA*ataA*gacA*gagD*ctgH*gcaD*gaaY:2*cacN*gtgL:1*ggcN*aagT:3*gccK:1*cggQ*atcA*atcL*ggcV:1*gccQ-ggc:1*ataM:5*aacA:5*atcV*tcaV:5-ttacag*cctK:2*ccgQ*gtaP*cgcV*accY*gtcI:2*ttcA:2*ccgD*accS:3*acaA:1*caaK +NC_000962.3 miniprot mRNA 688044 689062 687 + . ID=MP000038;Rank=1;Identity=0.4588;Positive=0.6206;Frameshift=1;Target=tr|O53968|O53968_MYCTU 7 342 +NC_000962.3 miniprot CDS 688044 689062 687 + 0 Parent=MP000038;Rank=1;Identity=0.4588;Frameshift=1;Target=tr|O53968|O53968_MYCTU 7 342 +NC_000962.3 miniprot stop_codon 689060 689062 0 + 0 Parent=MP000038;Rank=1 +##PAF tr|O69697|O69697_MYCTU 346 0 304 - NC_000962.3 699930 323616 324525 450 918 0 AS:i:706 ms:i:706 np:i:186 fs:i:0 st:i:0 da:i:6 do:i:276 cg:Z:32M2D17M1I106M1I68M1I78M cs:Z:*cgcM*atgA:2*ccgA*gtgE*tcgE:3*cacD:1*cgcI*cagA:1*atcR*gtcL:1*catS:1*ggcD:1*gtcM*gtcY:2*gctK*cacL*aacG*gatS*cgaH*aagG-ggctac:2*ttcR*gatR:2*cgcE:2*ctcF:3*gagG:1*gcgP:1+L*cgcT*gggA*gtgL*gccR*ggcD:2*atgT*attH:1*aagQ:2*gtcP*aagD:1*atcV*tccD*gccG:1*gcgQ*gtgI*tttY:3*gcaI:1*gcaR*aacH:3*tggY*gtgL*gacQ*gtgT*gccC*gagR*ctgV*cacT*tatF*gcgP:3*tccM:1*gcgD*gagA*gcgL*gtcK*attV*cacT*gacH*gccP:1*gggA*ctgI*gcgV:1*gtgA*atcA*aacQ*ctgM:1*tgtT*gtgI*gatT:1*aatH:1*catW*ccgQ:1*ctcR*gccC*ggcP:1*ctcT*gatE:6*gtgI:4*atgQ:2*gtcT*gcgG*tggF*cagV*cggE*gtcA*gtcR*gagT:2*ttgV+D:1*gtcL:1*gagS:2*gagD:1*tacL:2*accV*gcaG*tggY:5*tcgG:2*tttI:2*tatF*gccL:3*cctT*tgcD:1*tcgD:1*cccV*cagE:2*ctgR:1*gccG*cagI*accA*gttL:7*ctaA:3*gcaV:1*agtT*cgtS:6*gagG*ggcA+R*gtgI:1*gtcI:6*aagR:3*gtcM:7*gccP:2*gatI:1*cggT:2*acgM:2*cacT:3*gtgL*cccA:1*tgcA:2*gcgD*gtgD*ttcY:2*gccT:3*agcE*cggL*ttgV*gccK*gacI*atcR*ggtD:8*gcgV*gttA*ggcQ*cggS*ctcI*gacA*cggP:2*atgD:2 +NC_000962.3 miniprot mRNA 323617 324525 706 - . ID=MP000039;Rank=1;Identity=0.4902;Positive=0.6078;Target=tr|O69697|O69697_MYCTU 1 304 +NC_000962.3 miniprot CDS 323617 324525 706 - 0 Parent=MP000039;Rank=1;Identity=0.4902;Target=tr|O69697|O69697_MYCTU 1 304 +##PAF tr|O86335|O86335_MYCTU 1402 0 1402 + NC_000962.3 699930 485730 489936 4206 4206 0 AS:i:7166 ms:i:7166 np:i:1402 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:1402M cs:Z::1402 +NC_000962.3 miniprot mRNA 485731 489939 7166 + . ID=MP000040;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O86335|O86335_MYCTU 1 1402 +NC_000962.3 miniprot CDS 485731 489939 7166 + 0 Parent=MP000040;Rank=1;Identity=1.0000;Target=tr|O86335|O86335_MYCTU 1 1402 +NC_000962.3 miniprot stop_codon 489937 489939 0 + 0 Parent=MP000040;Rank=1 +##PAF tr|P71591|P71591_MYCTU 322 0 322 - NC_000962.3 699930 25915 26881 963 966 0 AS:i:1625 ms:i:1625 np:i:322 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:322M cs:Z:*gtgM:321 +NC_000962.3 miniprot mRNA 25913 26881 1625 - . ID=MP000041;Rank=1;Identity=0.9969;Positive=1.0000;Target=tr|P71591|P71591_MYCTU 1 322 +NC_000962.3 miniprot CDS 25913 26881 1625 - 0 Parent=MP000041;Rank=1;Identity=0.9969;Target=tr|P71591|P71591_MYCTU 1 322 +NC_000962.3 miniprot stop_codon 25913 25915 0 - 0 Parent=MP000041;Rank=1 +##PAF tr|P96399|P96399_MYCTU 302 0 302 - NC_000962.3 699930 259925 260831 903 906 0 AS:i:1569 ms:i:1569 np:i:302 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:302M cs:Z:*gtgM:301 +NC_000962.3 miniprot mRNA 259923 260831 1569 - . ID=MP000042;Rank=1;Identity=0.9967;Positive=1.0000;Target=tr|P96399|P96399_MYCTU 1 302 +NC_000962.3 miniprot CDS 259923 260831 1569 - 0 Parent=MP000042;Rank=1;Identity=0.9967;Target=tr|P96399|P96399_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 259923 259925 0 - 0 Parent=MP000042;Rank=1 +##PAF sp|P9WI39|PPE11_MYCTU 518 0 518 + NC_000962.3 699930 543173 544727 1554 1554 0 AS:i:2678 ms:i:2678 np:i:518 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:518M cs:Z::518 +NC_000962.3 miniprot mRNA 543174 544730 2678 + . ID=MP000043;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WI39|PPE11_MYCTU 1 518 +NC_000962.3 miniprot CDS 543174 544730 2678 + 0 Parent=MP000043;Rank=1;Identity=1.0000;Target=sp|P9WI39|PPE11_MYCTU 1 518 +NC_000962.3 miniprot stop_codon 544728 544730 0 + 0 Parent=MP000043;Rank=1 +##PAF sp|P9WKY1|Y3466_MYCTU 222 0 222 - NC_000962.3 699930 104436 105101 609 666 0 AS:i:1037 ms:i:1037 np:i:209 fs:i:1 st:i:0 da:i:0 do:i:0 cg:Z:97M2G124M cs:Z::1*ttaG*gcgS*aatG:3*gagR*cttI:9*gacE:12*agcT:14*gcgV:5*gccV*cagG:1*acgA:6*accA:24*gaaD:1*ggcA:2*agcI:1*gaaD:1*aagA*ccD:2*caaP:121 +NC_000962.3 miniprot mRNA 104434 105101 1037 - . ID=MP000044;Rank=1;Identity=0.9144;Positive=0.9414;Frameshift=1;Target=sp|P9WKY1|Y3466_MYCTU 1 222 +NC_000962.3 miniprot CDS 104434 105101 1037 - 0 Parent=MP000044;Rank=1;Identity=0.9144;Frameshift=1;Target=sp|P9WKY1|Y3466_MYCTU 1 222 +NC_000962.3 miniprot stop_codon 104434 104436 0 - 0 Parent=MP000044;Rank=1 +##PAF sp|P9WLB1|Y236A_MYCTU 57 0 57 - NC_000962.3 699930 286900 287071 171 171 0 AS:i:281 ms:i:281 np:i:57 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:57M cs:Z::57 +NC_000962.3 miniprot mRNA 286898 287071 281 - . ID=MP000045;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WLB1|Y236A_MYCTU 1 57 +NC_000962.3 miniprot CDS 286898 287071 281 - 0 Parent=MP000045;Rank=1;Identity=1.0000;Target=sp|P9WLB1|Y236A_MYCTU 1 57 +NC_000962.3 miniprot stop_codon 286898 286900 0 - 0 Parent=MP000045;Rank=1 +##PAF sp|P9WM95|Y030_MYCTU 109 0 109 + NC_000962.3 699930 33223 33550 327 327 0 AS:i:540 ms:i:540 np:i:109 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:109M cs:Z::109 +NC_000962.3 miniprot mRNA 33224 33553 540 + . ID=MP000046;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WM95|Y030_MYCTU 1 109 +NC_000962.3 miniprot CDS 33224 33553 540 + 0 Parent=MP000046;Rank=1;Identity=1.0000;Target=sp|P9WM95|Y030_MYCTU 1 109 +NC_000962.3 miniprot stop_codon 33551 33553 0 + 0 Parent=MP000046;Rank=1 +##PAF sp|P9WMA1|Y025_MYCTU 120 0 120 + NC_000962.3 699930 29244 29604 360 360 0 AS:i:571 ms:i:571 np:i:120 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:120M cs:Z::120 +NC_000962.3 miniprot mRNA 29245 29607 571 + . ID=MP000047;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMA1|Y025_MYCTU 1 120 +NC_000962.3 miniprot CDS 29245 29607 571 + 0 Parent=MP000047;Rank=1;Identity=1.0000;Target=sp|P9WMA1|Y025_MYCTU 1 120 +NC_000962.3 miniprot stop_codon 29605 29607 0 + 0 Parent=MP000047;Rank=1 +##PAF sp|P9WMI1|RAMB_MYCTU 474 0 474 - NC_000962.3 699930 554884 556306 1419 1422 0 AS:i:2442 ms:i:2442 np:i:474 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:474M cs:Z:*gtgM:473 +NC_000962.3 miniprot mRNA 554882 556306 2442 - . ID=MP000048;Rank=1;Identity=0.9979;Positive=1.0000;Target=sp|P9WMI1|RAMB_MYCTU 1 474 +NC_000962.3 miniprot CDS 554882 556306 2442 - 0 Parent=MP000048;Rank=1;Identity=0.9979;Target=sp|P9WMI1|RAMB_MYCTU 1 474 +NC_000962.3 miniprot stop_codon 554882 554884 0 - 0 Parent=MP000048;Rank=1 +##PAF sp|P9WNB3|ECC1A_MYCTU 747 13 708 + NC_000962.3 699930 345676 347758 711 2160 0 AS:i:874 ms:i:874 np:i:355 fs:i:0 st:i:0 da:i:-1 do:i:1866 cg:Z:60M3I17M1D74M9I123M2I10M2D6M6D16M2D9M3I16M9D50M2I16M1D5M3I6M1D7M1I115M1I72M2I37M2D8M1D22M cs:Z::1*agcR*agcL*cacT*cagP:1*accE:1*atcS*atcL*gagT*gcgP:1*cccD*gagD:1*cctG*cggI*gtgD:4*ctgG*ctaV*cgaQ*cgaK*gcgI:3*ctgV*atcM:1*atcG*ctcA*atcM*gtgL:3*gtgA*gcgI*ctgM:2*accG:1*atgT:1*gtgQ*attL:2*cagY*acgM:1*ttcM*ttcM:1+LMM*tttI:1*ctgM*ctgM*ttgV*gcgG*gccG*accL:1*ctcG*tacS*cgcT:1*aacG*gacG*aagG:1-atg*cgcK*accV*gagP:1*gtcI*gacN:1*gaaD:1*gccK*gacE:5*tcgA*gtgG*gtgL:1*gacT*aacR*attV*cggT*gccS*cagS:1*gccT*gagS:1*cggV:1*agcF*gcgF*ttgS*tggY*tctH*catA:1*gacH:1*acgE*gcgD:1*gcgL:1*gtgI*ccgV:1*tcaT*cgtQ:3*gagS:1*gacP*ccgA*cacN*gacA*cccD*gacF*tttY*ttgA*gtgA*ttgT:1*gccI:1*cggI*cacG*acgD*gtaQ:1+AVDRLLKPA*ctgV*gctG*actG*acgE:1*cgaA*gtcA*aacA*gacS*accA:1*gacP*gagQ*atcP*gacF:6*agtM*gcaW*ttaV*cgcV*agcK*ctgF:1*gacR:1*cagH*cgcG*agcL:1*ggcH:1*gtgC:1*accK*gggL*atcL*gacQ:1*accR*aagT*gttF*tcgP*ccgT:1*accA*gtgI*ctgG:1*gagD*cgcL:1*cagG*gtgA*cgcA*gcgG*gtgL*ttaM*cgcT:1*tggM:1*gctC*cagH*gcgL*gtgA*accV*tggF:1*gacP:1*acgD*gtgL:1*gggQ*gtgI*gcgR*ctgV*gccL*gcgT*cgtE*gatE*ctgP*gagD*ggtD*cgcP:2*aacS:8*gacQ*attH*cccQ*ggcT*cgcE*ctcT:2*ctgA:1*ccgS*gccT:1*aatL*ctgI*tcgF:1*gatR*cccQ*gacE*gagG:1+SD*atcL:1*ctgA*ctgR:2*gtcH*ctgA*gcaP:1-cgcccg*gcgS*tttL*accP:1*cagG:1-acagatgcgttgcggcac*ttgY*ctgV*atcV:3*gacL*ccgT*gacG*tacG*gacK*ctgA:1*gcaF*tcgP:1-ctggcg*gtgD:7*gtgI+TLG*cacN*tgcH*tcgR*gccG:2*ccgY*cacR*cggI*gaaR*cagV*tatH*tcgE:1*ccgG*gaaT-aagccgatcctgcgggtggctcacggc:1*atcD*gaaD:1*tggL*cagP*acaN*ggcQ*ggcS*tggF*cagR*cccQ*tacV*atcT*gacS*gccV*gccT:1*caaR*ttcM:1*gctP*gatQ*gagQ:1*gccS*cacR*ctgI:2*cgaK:1*tcgA*cggG:1*gacS*tccI*aacT*cccG:1*catI*gccL*gggD*ctgK*cgcT:1*gcgR*gccV*actQ*cgcK+KV*ggcA*gcgT*agtD*ttcW*accH*acaQ:1*ctgV:1*atcA*gagQ*gacS*gcaV*tccE*cgaE*ctgI-gat*gtgT:1*gcgS*ctgR:1+RMY*gcgT*ccgD*cgaT*cgaD:2-gag*gagR:1*cgcK*gtgI:1*atcF:1+H*gtcE*actL*ggcK:2*gagN*ccgV*ctgM*atgY*ttcL:1*ctcI:1*gacE*gaaG:2*ggcF:1*atgA:4*ctgM*atgL:2*atgT:6*cagE*actF:1*atgR*tcgT*attL*ctgI:3*ttgV*accA*acaM*cacT*tccH*gcgP*gagD*cggQ*ctcV*atcN*gtcL*atcL*tacL*gccT:4*gagG*gccS*ggcT*gccF*gacL*agtG*ttcM*cgaE*gatK*ttcL:1*cagH*gtgT*gttA:2*atcV*tcgT:4*aagE*aagA*tcgE:1*gctV*gatS:1*ttcM*gccG*gacE*acgV:1*cgcT:2*gtgL*gctD:2*gagQ*atgS*ctgI:2*gagQ:2*cgcM:2+G*cagA*ggcA*agcG:1*ttcL*aacS*tcgG:1*ctcA:3*aacK*gccY*atcR*gccE*gcaR:1*catA*agcD:3*atcL:6*gccV:3*accA*ttgE*atgL:1*gccQ*gatS:2*gaaD*tacF*gcgI*gagG:3*tatR*gtgI*gccC:1*aagV:3*tttL:1*atcV:1*atcL:1*ttcL:1*tccT:1*acaS:1*gacQ*gtgT:1+GV*aagR:1*aaaD*gacK*atcL*gacE*aagP:1*accL*gccT:3*gggA:1*aaaR*gtgT*gccT:1*cccS*agcH*gttE:1*cgcK*cagA*atcV:2*gtgT*gagP*gacE:1*tacQ*cacY:1*gagT*tcgN-ggcaaa*gaaK*cacE*aaaS:5-gtg*cccR*gcgV*cccG*ggtM*gccE*accD:1*ataV*aggK:1*cgcS*agcT*accF:1*gtcI*gacS:1*atcP:1*gaaM:2 +NC_000962.3 miniprot mRNA 345677 347758 874 + . ID=MP000049;Rank=1;Identity=0.3292;Positive=0.4931;Target=sp|P9WNB3|ECC1A_MYCTU 14 708 +NC_000962.3 miniprot CDS 345677 347758 874 + 0 Parent=MP000049;Rank=1;Identity=0.3292;Target=sp|P9WNB3|ECC1A_MYCTU 14 708 +##PAF tr|Q79FA2|Q79FA2_MYCTU 77 0 77 + NC_000962.3 699930 349934 350165 171 231 0 AS:i:294 ms:i:294 np:i:62 fs:i:0 st:i:0 da:i:0 do:i:1308 cg:Z:77M cs:Z::1*gccT:4*atgF:12*aatA:4*ggtA:2*gtgQ:3*acgA*gccE:1*agcT*cagS:7*acgA:1*gcaQ:2*agtT*gggA*ctaV:1*gggA:2*cctQ:1*tggG:2*cagE:5*tggA:8*gtgL:1 +NC_000962.3 miniprot mRNA 349935 350165 294 + . ID=MP000050;Rank=1;Identity=0.7403;Positive=0.8052;Target=tr|Q79FA2|Q79FA2_MYCTU 1 77 +NC_000962.3 miniprot CDS 349935 350165 294 + 0 Parent=MP000050;Rank=1;Identity=0.7403;Target=tr|Q79FA2|Q79FA2_MYCTU 1 77 +##PAF tr|Q79FF3|Q79FF3_MYCTU 354 6 349 - NC_000962.3 699930 428151 434049 567 1068 0 AS:i:820 ms:i:869 np:i:221 fs:i:0 st:i:0 da:i:180 do:i:-1 cg:Z:34M3I7M1I72M11D48M4878V46M2D20M8I16M3I84M cs:Z::1*gtcF:1*aacS*ttcQ:4*gccG:3*aacS*ggcT:1*atcV:7*tccT:1*atcV:1*tttS:2*gtgI:1*cctD+TNF:1*ttgN*accG*gcaN*gcgN*ctgG:1+F:1*atcF:1*ttcS:15*aacG:1*atcF:6*gacN*ggcN:1*cgaI:6*agcD:1*ttgQ*ttgI:1*ttcI:6*accS:4*ctgF*ttcG:8*atcL*ggcF:5-aactggggcattggcaactcgggcaacagctac:1*accV:6*gacT:5*ttcG:1*tccA:1*ataN*gccV:3*gtcF*ggcW:1*gccG:1*aacS*tacT:3*agcL*tacA:1*ccgA:1*aacA*agcG:3*ggcF:1*aacD*atgA:1*caN~gt4875ag-c:4*ttcS*ggcL:3*gatN*ttcI:1*ctgS*ggcS:1*gccG:3*agcD*aacG:1*atcS:2*gccL:1*accA:1*aacD*aacV:1*atcS:1*atcV:1*ctgN*tccA:1*cacD*aatV*caaN*cagT:1*ttcL:1-tcctgg:3*accN*gccI:3*ctgG:2*tcgP:2*aacL:1*atcT:1*ttgF:1+SAMTQAGP:3*accF*ggaF:1*atcA:1*attT:4*atcF:1*aacH+NDP*accA:1*atcS:2*ccgS:1*gtcI*ggcQ:1*accS:1*ttgF:4*accY*ggcV:1*tggT*ggcS*ctgT*tggT*aacS*ccaM*ggcF*accG:2*atgS:2*gccL:1*gtgT:1*accY*tacG:1*accS:1*ggcF:2*gtgA*ggcA*agcV*accN:4*gccF*aacV*gtgT:1*atcV*gccM*aacS*acgS:1*agcF*tacF:1*accF:1*agcT*accG:1*accS:1*agcL*ttcL*aacV*gacS:1*gacN*ttcG*aatL*accS:2*tacF +NC_000962.3 miniprot mRNA 428152 434049 869 - . ID=MP000051;Rank=1;Identity=0.5309;Positive=0.6208;Target=tr|Q79FF3|Q79FF3_MYCTU 7 349 +NC_000962.3 miniprot CDS 433532 434049 522 - 0 Parent=MP000051;Rank=1;Identity=0.6158;Target=tr|Q79FF3|Q79FF3_MYCTU 7 171 +NC_000962.3 miniprot CDS 428152 428656 347 - 1 Parent=MP000051;Rank=1;Identity=0.4469;Target=tr|Q79FF3|Q79FF3_MYCTU 172 349 +##PAF tr|Q79FF3|Q79FF3_MYCTU 354 4 354 - NC_000962.3 699930 372098 425388 555 1080 0 AS:i:723 ms:i:865 np:i:222 fs:i:0 st:i:0 da:i:417 do:i:-1 cg:Z:36M2D29M50247V147M1993V4D22M8I14M2D66M2D26M cs:Z::1*ggcR:1*accF:1*aacS*ggaQ:1*atcL:1*atcS:2*accI:1*accS*ggcT:1*atcV:1*ttcS:2*accI:1*aacS*ggaT:1*atcV:1*atcS:1*ctgN*accI:2-accatg:1*gggN:2*ggcN*tggG:1*tcgN:1*accN*ggcF:1*atcF:1*ctaS*ttcG:1*tccT:1*accS*ggcN:6*tccT:1*acS~cg50244ag-c*aacG:1*gtcF:6*agcN:2*gtcI:6*aacD:4*ttcI:1*agcG*ttcL:4*cacG:3*ctgF*ttcG:3*agcT:12*ttcV:1*atcF:5*ggaA:1*ttcT:1*ctcF:2*acgA:1*agcN*accV:3*tggF*ttcW:1*accG:1*gacS*gtcT:3*ggcL*ttcA:1*ccgA:1*agcA*tacG:3*aacF:1*aacD*accA:4*accF:2*ttcL:4*tacI:1*accS*ggcS*tacF*ttcG:1*accS:2*tacG:1*actS:1*gtgF*gccL:1*accA:1*aacD:2*accS:1*gccV*ttcG*atcN:2*aacD*tacV*agcN*aacT:1*gtcL*ttG~gt1990ag-t-ctcggcggcttt:1*ttcS:1*ggcN*gccI*accN*atcT:1*cacG*aacF:1*gtcP:1*atcT*gggL:3*atcF:1*gatS*gtcA+MTQAGPNS:1*ctgF*gcgF:1*ctgA:1*agcT*tacG:1*atcS:3*aacH-cttggc*gacN:1*aacP*ctgA:1*ttcS:2*ttcS:1*agcI*tacQ:1*atcS:4*gtcS:1*aacY*gacV:1*ctgT*ggtS*ttcT*gctT*aacS*gcgM*ggcF:3*atcS:1*tttV*gcgL:3*agcY*aacG:1*gtcS:2*gggY:1*acgA*ggcA*agcV:2*gtcT:2*gggF*ctcV:2*aacV*ggaM*cagS*atcS:2-ggcagc:2*tcgF:1*agcT:2*atcS:2*ttcL*aacV:2*agcN*aacG*aacL*atcS:3*aatK*tccN*ggcL*agcF:1 +NC_000962.3 miniprot mRNA 372099 425388 865 - . ID=MP000052;Rank=2;Identity=0.5139;Positive=0.6167;Target=tr|Q79FF3|Q79FF3_MYCTU 5 354 +NC_000962.3 miniprot CDS 425186 425388 172 - 0 Parent=MP000052;Rank=2;Identity=0.5000;Donor=CG;Target=tr|Q79FF3|Q79FF3_MYCTU 5 69 +NC_000962.3 miniprot CDS 374498 374941 486 - 1 Parent=MP000052;Rank=2;Identity=0.6149;Target=tr|Q79FF3|Q79FF3_MYCTU 70 217 +NC_000962.3 miniprot CDS 372099 372507 207 - 1 Parent=MP000052;Rank=2;Identity=0.4167;Target=tr|Q79FF3|Q79FF3_MYCTU 218 354 +##PAF tr|O06393|O06393_MYCTU 324 0 324 + NC_000962.3 699930 619890 620862 969 972 0 AS:i:1674 ms:i:1674 np:i:324 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:324M cs:Z:*ttgM:323 +NC_000962.3 miniprot mRNA 619891 620865 1674 + . ID=MP000053;Rank=1;Identity=0.9969;Positive=1.0000;Target=tr|O06393|O06393_MYCTU 1 324 +NC_000962.3 miniprot CDS 619891 620865 1674 + 0 Parent=MP000053;Rank=1;Identity=0.9969;Target=tr|O06393|O06393_MYCTU 1 324 +NC_000962.3 miniprot stop_codon 620863 620865 0 + 0 Parent=MP000053;Rank=1 +##PAF tr|O07256|O07256_MYCTU 261 0 261 + NC_000962.3 699930 397441 398224 780 783 0 AS:i:1393 ms:i:1393 np:i:261 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:261M cs:Z:*ttgM:260 +NC_000962.3 miniprot mRNA 397442 398227 1393 + . ID=MP000054;Rank=1;Identity=0.9962;Positive=1.0000;Target=tr|O07256|O07256_MYCTU 1 261 +NC_000962.3 miniprot CDS 397442 398227 1393 + 0 Parent=MP000054;Rank=1;Identity=0.9962;Target=tr|O07256|O07256_MYCTU 1 261 +NC_000962.3 miniprot stop_codon 398225 398227 0 + 0 Parent=MP000054;Rank=1 +##PAF sp|O53666|FADE5_MYCTU 611 0 611 - NC_000962.3 699930 293800 295633 1830 1833 0 AS:i:3117 ms:i:3117 np:i:611 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:611M cs:Z:*gtgM:610 +NC_000962.3 miniprot mRNA 293798 295633 3117 - . ID=MP000055;Rank=1;Identity=0.9984;Positive=1.0000;Target=sp|O53666|FADE5_MYCTU 1 611 +NC_000962.3 miniprot CDS 293798 295633 3117 - 0 Parent=MP000055;Rank=1;Identity=0.9984;Target=sp|O53666|FADE5_MYCTU 1 611 +NC_000962.3 miniprot stop_codon 293798 293800 0 - 0 Parent=MP000055;Rank=1 +##PAF tr|O53705|O53705_MYCTU 298 0 298 - NC_000962.3 699930 447149 448043 891 894 0 AS:i:1525 ms:i:1525 np:i:298 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:298M cs:Z:*gtgM:297 +NC_000962.3 miniprot mRNA 447147 448043 1525 - . ID=MP000056;Rank=1;Identity=0.9966;Positive=1.0000;Target=tr|O53705|O53705_MYCTU 1 298 +NC_000962.3 miniprot CDS 447147 448043 1525 - 0 Parent=MP000056;Rank=1;Identity=0.9966;Target=tr|O53705|O53705_MYCTU 1 298 +NC_000962.3 miniprot stop_codon 447147 447149 0 - 0 Parent=MP000056;Rank=1 +##PAF tr|P96281|P96281_MYCTU 728 0 728 - NC_000962.3 699930 522349 524533 2181 2184 0 AS:i:3579 ms:i:3579 np:i:728 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:728M cs:Z:*gtgM:727 +NC_000962.3 miniprot mRNA 522347 524533 3579 - . ID=MP000057;Rank=1;Identity=0.9986;Positive=1.0000;Target=tr|P96281|P96281_MYCTU 1 728 +NC_000962.3 miniprot CDS 522347 524533 3579 - 0 Parent=MP000057;Rank=1;Identity=0.9986;Target=tr|P96281|P96281_MYCTU 1 728 +NC_000962.3 miniprot stop_codon 522347 522349 0 - 0 Parent=MP000057;Rank=1 +##PAF tr|P96396|P96396_MYCTU 537 0 537 + NC_000962.3 699930 256063 257674 1608 1611 0 AS:i:2846 ms:i:2846 np:i:537 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:537M cs:Z:*ttgM:536 +NC_000962.3 miniprot mRNA 256064 257677 2846 + . ID=MP000058;Rank=1;Identity=0.9981;Positive=1.0000;Target=tr|P96396|P96396_MYCTU 1 537 +NC_000962.3 miniprot CDS 256064 257677 2846 + 0 Parent=MP000058;Rank=1;Identity=0.9981;Target=tr|P96396|P96396_MYCTU 1 537 +NC_000962.3 miniprot stop_codon 257675 257677 0 + 0 Parent=MP000058;Rank=1 +##PAF sp|P9WJQ5|MOEA2_MYCTU 405 0 405 - NC_000962.3 699930 526145 527360 1212 1215 0 AS:i:2043 ms:i:2043 np:i:405 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:405M cs:Z:*gtgM:404 +NC_000962.3 miniprot mRNA 526143 527360 2043 - . ID=MP000059;Rank=1;Identity=0.9975;Positive=1.0000;Target=sp|P9WJQ5|MOEA2_MYCTU 1 405 +NC_000962.3 miniprot CDS 526143 527360 2043 - 0 Parent=MP000059;Rank=1;Identity=0.9975;Target=sp|P9WJQ5|MOEA2_MYCTU 1 405 +NC_000962.3 miniprot stop_codon 526143 526145 0 - 0 Parent=MP000059;Rank=1 +##PAF sp|P9WKV9|Y477_MYCTU 148 0 148 + NC_000962.3 699930 566775 567219 444 444 0 AS:i:784 ms:i:784 np:i:148 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:148M cs:Z::148 +NC_000962.3 miniprot mRNA 566776 567222 784 + . ID=MP000060;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKV9|Y477_MYCTU 1 148 +NC_000962.3 miniprot CDS 566776 567222 784 + 0 Parent=MP000060;Rank=1;Identity=1.0000;Target=sp|P9WKV9|Y477_MYCTU 1 148 +NC_000962.3 miniprot stop_codon 567220 567222 0 + 0 Parent=MP000060;Rank=1 +##PAF sp|P9WMG1|Y890_MYCTU 882 0 878 + NC_000962.3 699930 464028 466662 1509 2652 0 AS:i:2298 ms:i:2287 np:i:610 fs:i:0 st:i:0 da:i:126 do:i:3 cg:Z:39M1D273M1D108M2I2M3I34M2D125M1D15M1I34M1D242M cs:Z:*gtgM*cacR*cggA:1*gtgL*accA*gatQ:6*accC:1*gccT:9*gcgI:1*ctcI:1*gcgS*cagA*atcS*gccE*ggtL*gagR*ttcD:1*cgcL*gcgC-tgg:8*gacE*cccS*gacG*ttgI:1*ccgA*gtcA:1*gtgA:1*ggcR:1*ctgV:2*cacP:7*acgM:1*accS*gtgL*ctgR:2*cttI:1*gggN:1*ccaR*gccM:1*gtgM:11*acgC:4*ttaV*gcgE:1*gtgL*aaaG:2*cggP*gggE*gtgL*aggT*ttgI:3*tgtS:3*ctcI*cggG*gtcM*gagA:2*gtgI*agcT*tacW:4*ctgM:1*ctgI*agcT:5*atgL:1*tgcA*tacD:2*cagS:2*cggQ:1*gacG:1*cgcT*ctcI*accA*gacN*gacH:1*tccA:3*accG:3*aaaR:4*ttgI:5*ctgF:4*ctgV:3*acgS*cttP*gacL:2*atcA:3*cgtD:1*cggC:1*gcgR:2*accA:2*gcgV:1*acgG:1*gcgV*cacQ:5*tggR:2*gtgI:3*tacH*acgA:4*ccgT:1*cgtQ*accI:6*gtgP:3*tgcG:1*tttD*gtcL*gacA*gacA*gcaV*cagR:3*tgcA*agcG*ggcS:1*gtgL*cagD*cgcP*tacF*cagS:3*gagQ*atcL:9*atgV:3*aacC*agcQ:3*tgcR:3*tgcL:2*atgV:1*cacR:6*tccG*gagD*gctS:2*gtgA:1-gcc:1*tttH:12*aggS*gtcL*gacN*aatT:1*ggaA*cccD*tccN:1*tatH*tcgQ*cacR*tgcL*ctcV*gacA*caaR:12*gtgA:1*aacS:3*tccG*gacH*accI*gagT*ggcE:2*gcgQ:5*ttgQ*cggP*gtaI:1*atgF*acgG:1*gggA*cgcH*atcL*cagR:2*cgcL*gccS:2*gacN:3*gccE:1*gagQ*aatR*gcgF*cgtH*catR:1*gagA:1*gcgS*gccT:11*ctgM:1*gacS+TW*atcL*ttcA+TSP:1*gacG:1*gccT*gccD*ggtI*atgI*gagA*cagP:5*gtgA*atcM:4*gatG*gaaD:2*ctgA:1*tccV:7-ttgatc*gcgC*gtaS*gcgS*gtaG*gctY*cgcN:1*gatE:3*tctP:5*atcT:5*gtaI:2*cggK:1*aggT:1*gccC:3*accY*tttW*cagR*gcgG:1*gatG*gcgT*gtcC*gtgI*gcgS:3*gtcN:1*gcaL:1*ccgA:2*caaE:1*gcaC:1*gagD:2*gccD*gcgT:3*cacR*tccF*aatV*gcgS*ctgR*tggH:1*cgcS*tggL*tgtW:1*ggcS*tacL:2*ctgM*atgW*cggA:1*gagN:1*gccT*gcgE:1*gccL*gccE*caaL*ttcS*ggcR:1*gtgI*gtgT*gacA:5*cagN*gaaD:1*ctgP*cacT:1*gccV*aacL*agcG:1*cagY*ggcT*ctgQ:1*ttcQ*gcgV:3*cagC:1-gaa*ttgA:3*aggH:1*gcgI:1*gacG:1*gctC*ctcI*gagA:2+T:3*gagG*tacV*ttcY*gcgQ:1*atgI:2*tcgA:1*ttgM:1*acgY:8*cagT*acgA:1*caaL*catE:2*gagD:2-tgg:1*aacP*ttgI*agtL*ttgR:1*ctgQ:1*ctcD*tcgQ*gcaV*gcgT*gtgM*cagH*cgcQ*gcgV*ttcL*aatM:2*gctL:6*cttA*agcI:3*cgtQ*tggF*tgtA*gacN:3*cagD*tcaA*atgT*accN:1*catW:1*ctgR*gcgM*atgV:2*gcgT*actI:3*atcV:1*gtcT:1*gagR:1*aagE*cggP:1*gaaL:1*gaaR*cgcD:3*aagA:4*gcgG:2*agcL*gggH*gcaI*cacY*ctgQ*gatG*ctcM:2*gtgA*ctcM:1*tgcL:5*agcG*gacE*gccV:1*accS:1*catS*gcgE*gcgG*gcaV:2*ttcL:3*gagA:1*atcL:3*atcT*ggcR*tcgQ:3*gcgK:1*tacW*cgtD*tcgA*gacG:1*gtgQ*cagA:6*gatE:3*gagD*aaaE:3*gctR:9*atcT*aagD:1*acgA:7*cacR*tccG*tggE:5*accR:2*gaaG:6*attR:6*ggcS:3*gccS:5*acgK:17*accA:3*ttcL*accP:2*ctgV:2*gctV*caaD*gcgE:4 +NC_000962.3 miniprot mRNA 464029 466662 2287 + . ID=MP000061;Rank=1;Identity=0.5690;Positive=0.6900;Target=sp|P9WMG1|Y890_MYCTU 1 878 +NC_000962.3 miniprot CDS 464029 466662 2287 + 0 Parent=MP000061;Rank=1;Identity=0.5690;Target=sp|P9WMG1|Y890_MYCTU 1 878 +##PAF sp|P9WPS5|CTPI_MYCTU 1632 0 1632 - NC_000962.3 699930 125645 130541 4893 4896 0 AS:i:8150 ms:i:8150 np:i:1632 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:1632M cs:Z:*gtgM:1631 +NC_000962.3 miniprot mRNA 125643 130541 8150 - . ID=MP000062;Rank=1;Identity=0.9994;Positive=1.0000;Target=sp|P9WPS5|CTPI_MYCTU 1 1632 +NC_000962.3 miniprot CDS 125643 130541 8150 - 0 Parent=MP000062;Rank=1;Identity=0.9994;Target=sp|P9WPS5|CTPI_MYCTU 1 1632 +NC_000962.3 miniprot stop_codon 125643 125645 0 - 0 Parent=MP000062;Rank=1 +##PAF sp|P9WQ45|FAD25_MYCTU 583 0 583 + NC_000962.3 699930 483976 485725 813 1773 0 AS:i:1245 ms:i:1245 np:i:358 fs:i:0 st:i:0 da:i:0 do:i:6 cg:Z:6M5I55M3D84M3I15M1D201M2D17M1D41M1D156M cs:Z::3*ataV*tccE*acgS+SLPGV:2*gacE:2*accS*acgF*actQ:1*agcN:1*gaaK:1*tttL*gtgT:1*atgI:2*gacE*acaR*aaaS*accW*ggcD*gacG*caaV*attE*gacE*cgaT*atgL:6*tctR:1*gtcT*accL*gccN*gtgL*tctA:1*tatQ:1*ataR*agtE*tatH:1*cggS*catT*gctG:2-cgaaggacc:1*gcgL:1*tcaL:3*ggtS:4*gcaV*ggaS:1*ctaI*ggaA*gcaS:1*tgcQ:2*tggI*acgV*ccgA:3*ccaS*gaaI:1*ctgQ:1*agcG*ctaA*cgcH:1*aagE:2*ggaV*ctgS*gctV*gtaF*ctcA:1*tgtT:1*gccP*gacA*gtcI:3*acgA:1*caaS*gccV*gaaV*acgD*cggN:1*aggV*gccE*acgY*ataV*gctQ*acaP*catQ*gggP*gcgG*tctQ*gtaN*actA*acgP*ccgA:2*gcgE*ttgV:1*acaR:2+LDA*gagR:2*ggaS*gatG*aacS*tgtR*gatS*ctcA*gatA*tctH*caaG*ctaH*tcaP:1-tgg*agtI*tcgL:9*gccR*aacT:1*cgtA:2*gttM*ttaV:1*atgN*cgtK:1*gttL*acgF*gaaA:1*gtcF*gacE:2*atcM*cgtT*aacS:1*tttY*cgcG*catV*gagY:1*ggcK*gcgV*ccgA*aggP*ttgP*cccG:1*tcgT:6*cttF:5*ttaF*atgV*gttL:2*tttI*attL:1*ttgI*tttL*gtcA:1*tgtI:1*gttA*atcV:4*gagI*gcaG:1*atcL*cgtQ*aagR:4*atgI:1*ctgM:2*aaaS*cacN*cagT*gcgL*ccaA:1*tcgT:10*gtcS*gctR:2*tccK*gaaD:3*gcgE:5*cacG:1*aatH*acaG:1*atcL:2*gcgS:1*cagR:3*aatV:1*ataL*accK*aaaR:1*ctcI*cgcD:2*cgtA:1*tacF:2*atgD:1*gcaK:1*gtcI*aagR:8*gtgT:2*ctgV:2*acgR:3*tcaQ:2*acgK*tcaI*accV*gagQ:2*gctP*gatQ*agcK:1*gctP*cgaD:1*cacQ:2*ctaR*agtT-actttc:1*actS*gagD*cgtG*gcaG:1*cgtP:1*ataV*cgcS:1*cacG*agcI*gacV:1*aagT*gaaQ-ccg:1*cttV:6*tcgT*aatG:2*ctcR*ggaP*ccgA:1*cgtT:5*attV:2*aagD:2*tctA*accI:2*cacW*aatQ*gcaK*gacP*gacE:1*ctcT*aatE:1-gat*aagT:1*cagS:1*agcT:1*cggV*gagN*gccP:1*gcgE:3*aggA*tcgG:7*ttgS:2*ataL*gtaS*ggaE*gatG:1*ttcL*tacF:1*gtcM:2*atgI:3*attL:1*caaV*gacY:1*gtaR:2*tatS:5*actA:1*gtcI*aagQ*gagT*tttI*accS*ggtP:2*gtcC:2*tttI*tcaA:2*gacE*gacH:1*gtgA:1*catK:2*attA*gcgI*gccI:1*gtaL*aggK*actK*gagK*catD*gggE*cccS:1*aaaD*gtgE*actA*attA*atgE*gatR*ttcL*tcgG*acgF*atcV:2*ctgE:1*gtaT:2*ttgI:2*ttaS:3*catS:1*acaA:1*tttL*cttV:2*ccgS:2*gcgS*ctaI:1*aagI:6*agcR:2*gcaQ:1*gcaV*aagE*cagL:1*ggaR*gcaQ*aatD*aagE*ttgF*caaT:1*gtaL*gcaD*acgA +NC_000962.3 miniprot mRNA 483977 485725 1245 + . ID=MP000063;Rank=1;Identity=0.4585;Positive=0.6058;Target=sp|P9WQ45|FAD25_MYCTU 1 583 +NC_000962.3 miniprot CDS 483977 485725 1245 + 0 Parent=MP000063;Rank=1;Identity=0.4585;Target=sp|P9WQ45|FAD25_MYCTU 1 583 +##PAF sp|P9WQE5|PPSB_MYCTU 1538 28 922 + NC_000962.3 699930 486033 488688 1104 2742 0 AS:i:1508 ms:i:1498 np:i:509 fs:i:0 st:i:0 da:i:303 do:i:1248 cg:Z:42M6I2M5I90M1D188M3D72M1D28M6D39M1I51M1I55M1D8M1D69M2I128M1D4M4I21M8I29M6D10M1I19M1I10M cs:Z::1*ggcI*agcA*ataV*aacA:5*atcV:1*gtgI:7*attV:4*cggS*ctaF:4*accV*gagA*aagG*aagR*tgtN:2*acaS*gcgT*tatV:1+ADRWDA*gatE*cgtA+FYHPD*gggP*ttcL:1*aatP*gctG*ggaR*actM*ttcT*gcgT*gagK*tccW:3*ttaV*aagP:6*aatA*agaE:2*gatG:1*ccgT:1*gacR:2*ctgA*cgaA:6*ttgM:4*tctA:9*attP:1*gagD:2*agaG*cttG*tcaT:2*ggcA:1*ttcM*gttM:2*tcgY*tcaF*actN*gacE:1*gtcQ*cggS*cttM*gtgL*tcaA:2*gctP:1*caaN*aagV*tctD*actA-att*tggY*gatS*aacG:2*ggtN*tctA*tcgH:2*attT*gccV*aatG:4*tttL:1*gatG*attL*cagR:2*tccA*attV*gtcA*attV:15*cgaQ:2*agtR*accL*tggR*gacE*tgcT:1*atcL:2*gtcA:2*acgV*aatS*gttI*cttT*attL*tcaR:2*ccaT*tggQ*ggtI*gggA*tttI*aggS*gaaA*gcgW:1*atcL:2*cagP*acaQ:1*tgcR:1*cacA:3*aaaA*tccA:3*atgF:5*tgcA:2*atcV:2*cagK:2*agtT:2*cgcV*cttR*gagD:1*cggD*cggQ*ataV:2*attV*ctgV*acgR:8*aagR:3*attV*atgT:3*cctT*agtA:2*attC*ggtD:1*cttI*gaaA*aatD:1*tgcL*aagR:1*gctG*cgcD:1*gatA:1*ctgD*gaaS*atcV*ggcN:9*tcgV:3*aggP:2*gcgF*cacE:2*ggcA*atgA*gtcT*tttY:1*cgcH-aagagaccg:1*tctG*gggD*cccA*ctgC*atgA*atcL:1*agcA*atcV:1*ccgT:6*ggtA:6*ttgF:3*gtgT:1*atgA:1*gagQ:1*ggcA*tcgT*ctgI*cttP:1*agcN*gggL*gggH:1*acgS*gagQ*ccaW:4*ccaD*ttcA*acgA*gaaS*ttgT*ggcR*ctgF*agaF:1*gtaP*gacT*gaaQ*cttN*cagS*gagP:2*gtgT*gtgA*gcgE:1-cgg:4*gggA:5*tttL:8*gtcI:1*gaaQ*gctG*ggtS*tcgE*gttL*gggA*gcgP-gacacggtttcgggccgc*gcgV*gatS*gttE:2*tccE*ggtD*ggtT:2*gtgS*gcgT*tggL:1*attV*tcgT:4*tcgQ*gcgR*ttgM:2*cagT:1*ggtQ*cggV:1*gggA*cggD*tatW*gtgM*cggE*gctG*cggP*ccgG:1+E*cttV*gatA:1*gttA:2*gggA*tatH*tcgT*ttgV*gtgN*agcH*acgH:1*tcgA*gtgR*tttQ*gatA*catT*cggF*gcgG*gtgT:2*ggcA*cagR*actD:1*gatA*gagQ*ttgA*ctgI:3*gctR*gggA*gtgL*gttA:2*cggQ*ccgH*gagA*gctP:3*tgcS*ggtH*gttQ+D:1*aagS:1*gcgG*ggcP*aagG:1*gctV:2*tttY*gccS:1*cagR:4*ctgA:3*agcR*gagQ:1*tatL:1*gccD*tacE:1*gttA:2*gagA:1*ctcV*gatA*gctE*gtgL*gtgE*gacP*gagV*ttgF*gacV*cggE*cacQ*ctgA*cggG*tatF*ccgS:5-tgg*gggA*cacT*gacG*caaK*gatE:1*ttgV*aatG-acc*accI:1*ttcQ*gccI:1*ccgL*gcgG:1*tttI*gcgG*gtgM*gagQ*gtgL*gcgT:1*tatT*cggE:1*ctcW*atgR:1*tggY:2*cggQ:1*ggtD:2*ctgI:3*gtgM:2*ttgV:3*cacV:5*tgtT*ttgP*ccgA*gatE*gcgG*gcgL*atgR*ctgV*gtgT:1*gcgT:1*ggaA:3*cagA*gcgP:1*cccS*gccG*ggcQ:1+GM:1*atgL*tttL*gcgG*gtgL*cagD:1*cgtA*gaaA*gacT:1*gtaA*gcgL*ccgI*atgA*ctgD*gggY*cacP*gatQ:1*agcT*atcV*gcgG*gcgI*gtcY:1*ggtS:1*gctR*tcgQ*gtgT:2*tctA:1*gccP*cacT*gatE*gcgQ*gtgI*agcD*gcgE*atcL*gctI*gatA:1*ctgV:1*ggcA:1*ggcN:1*cggF*gtcA*cacS:1*ttgV*gcgN*gtcI*tcgE*catV:1*tttP:1*tcgN*gcgP*ttgA:1*gagD*ccgA*atgL*atcQ*gctP*gagA*ttcM*acaR*gccS*gttE*gcgL:1*gaaD:1*tctT*gtgP*ggcR*ttgT:3*ccgG*gtcI:2*aatT*gtgT*accY*gggA*cagD:1*gtgH*gccT*gacQ*gacP*ttcI*gccF*tcaD:1*gatE*tacH:2*cggT*catN*atcM:1*gcgN*gtgP:3*ggcQ*gacQ*agtA*gttI*cgtA:2*cacG-tgc*gccS:2*agtD+GAYH*cgtT:3*gtcI*gggS*cccA*ggtH*ggcP*ggcL:2*tcgQ*ttgA:1*gagA*gcaD*tcgT:1*gccE:1+AHRPTKSA:1*cagK*atcY*gtgL:1*gtgI*cccG:2*cgcQ*aaaR:1*cggA*cccD*gaaD*ccgT:1*agtT*gtgF*atgR:1*gcgN*gcgL*gccY*cagT*ggcA*ttcD*gtcI*tcgA-gggatgggcctggattgg*gccH*tcgP*gtgP*tttH*tccT*gggC*tacH*cggP:1*aagE+P*cggH*gtgP*gagT*ttgI:2*tatT*gccP*ttcW:2*caaT*aagH*ttcH:1*ctcI:1*ccaT*gccT+H:2*gtcT*agcA*gacA:1*accE*gccD*gccP:1 +NC_000962.3 miniprot mRNA 486034 488688 1498 + . ID=MP000064;Rank=1;Identity=0.4026;Positive=0.5569;Target=sp|P9WQE5|PPSB_MYCTU 29 922 +NC_000962.3 miniprot CDS 486034 488688 1498 + 0 Parent=MP000064;Rank=1;Identity=0.4026;Target=sp|P9WQE5|PPSB_MYCTU 29 922 +##PAF sp|P9WQG3|ACDC_MYCTU 388 0 359 - NC_000962.3 699930 478655 479690 336 1083 0 AS:i:360 ms:i:360 np:i:171 fs:i:0 st:i:0 da:i:63 do:i:87 cg:Z:36M6I16M1I31M1D90M6I19M1D32M1I74M2I45M cs:Z:*tccM*agcT:1*gagT*atcS*gccF*gtcI*cgcE*gacS*accE*gtcE:1*cggQ*ttcA*tgcL*gccR*gaaK*cacA:1*accA*ccgS*cacW:2*gcgN*tggY*ttcG*gagH*gacE*ggcY*gacY:1*ccgD*gtcK:2+KHEHTS*gatE:1*gccW*aaaA*cagE*ttcA:1*gaaK:2*ctgF:2*atgV*cagN:1+P*cacE*ggcE*cacY:1*tgtG:3*tcgG*gcgM*gtgY*cacE*tatL*ggcS:1*gccV*tgcM*cggE:1*ctgM*gagA:2*gacG:1*ggcA*atcL*cggL*tcgL*ctgM:1-tcg:1*cagS*ggtP*tcgA*ctgI*gcgN*atgG*ttcT*gccI:2*agcK:2*tccT:1*gagD:2*cggK*cagR:4*atgI:1*accD:1*gacS:1*ctcT*ggcM*tgcA:1*gggA*ctcI:4*gtcA:2*gacN*ccgS*gccH*gcgK*atgI*aaaT:1*cggT:5*ccgS:2*gtgI:1*accK:1*ggcQ:1*atgV*tggF:1*accS*aacG*ggcI*tcgD*gtcQ:1*gacQ*gtgA*gcgV*atcL:1*tggV*gccG*gccR*accS*gacE*gacE*ggaA*atcK*cgcT:1+KLRPAL:1*atcV:4*accA:3*accS*gccY*aacT*accP:1*ggtE*cacM*aagE:1-tcg*ctgV*cggS*gcgP*tcgE*atcR*accQ*agcF*gagQ*ctgV*gtgF:2*aatD:7*atgL*ctgV*cccG*ggcA*gcgE*accD*ggcA*ctcA*aggI:1*ccgQ:1+F:1*tgcG:1*tcgN*gagP*gcgE:1*tacI*gggM*atcG*gtcA*tggA*ggaS:1*atgV:1*gcgM*gccG:1*tcgF:1*tggL*cagG*tgcR:1*ctcV:2*gcgV*agaK*cagT:1*accK*cagV*ttcW*ggaS*cgtT:2*gccG*ggcA*ttcH:1*ctgG*accL*cagA*gccH*aagP:1*gtcA*gacQ*atgC*gccH*gtgI:1*ctgV*cacE*aagL*ggtA*cagK:1*ctgM*tcgT*ttgQ*catK*ctgA*gggA*cgcT:1*aaaY:1*aggH*gtgG*ggcD+DF*ctgG*cgcA*cccA*gatE*cagA*gtcA*agcN*ttcM*ggcA:1*ctcY*aacA*aacA*accA*cggE*gaaA*gcgS*ctcS*aaaR*atcA*tgcV*cggD*accQ:1*cgaV*acaQ*ataS*ctgM:4*ataL*tcgT*ctgK:2*ccgG:1*atcA*cggA*cacM:1*gtcT*aacS +NC_000962.3 miniprot mRNA 478656 479690 360 - . ID=MP000065;Rank=1;Identity=0.3102;Positive=0.4737;Target=sp|P9WQG3|ACDC_MYCTU 1 359 +NC_000962.3 miniprot CDS 478656 479690 360 - 0 Parent=MP000065;Rank=1;Identity=0.3102;Target=sp|P9WQG3|ACDC_MYCTU 1 359 +##PAF tr|Q6MWW7|Q6MWW7_MYCTU 1079 74 1079 - NC_000962.3 699930 334159 338542 1710 3723 0 AS:i:2097 ms:i:2173 np:i:627 fs:i:0 st:i:0 da:i:-1 do:i:-1 cg:Z:32M8I21M4I6M1D15M1D7M7D26M1D35M1I28M1D9M5D12M1D21M1I10M2I46M33D3M2D17M2I28M1D7M5D12M6D19M7D13M2D14M3D20M3D9M2D54M9D12M4D15M3I32M9D12M747U4M2D16M6D8M4D12M3D12M8D11M4D26M3D12M2D24M5D26M5I13M6D28M4D24M7D16M8D54M35D2M4D17M12D9M4D8M2D17M1D10M2I16M6D12M1D15M4D12M2D37M cs:Z::1*accK:2*gccT:2*gccD:1*gggA*gccL:2*atgS*ctgS*ttcG:2*gccG:1*gtcK:2*cccN:2*ttcD:1*gccG*gctK*ttcA:1+TGSAPGTA*gccG:3*gccD:2*gccK:5*ctgI*ttcG:1*gacA:1*gggT*gtcT:1+PVGT:2*ggcS:1*gcaG:1-gac*gccG:1*accS:5*tccT:2*aacD:2*ctgA-ttc*ggcA*gccN:3*ggtA:1-cccggcggattcggcatcttt*ggcA:5*gatN:2*tctK:2*ctgD*ttcG:3*ggcV:1*ggcS*ggtS*agtT*ggcA:1*acgN:1-ata*atcG*aacG*gtcA:2*aacS:2*gccK:5*atgA*ctcG*agcG*ctcA:2*gccT*ggcP:2*ggcN:1*agcI*ggcA:1*tccN*aacG*ccgG:3+D:1*ggtA:2*gggA*atcV:1*ggcI*gacS:1*ggcA:1*ttgG*ttcA:1*tccD:2*gccH:2*gtcT*tgcG*gggA*ctgA:1*ttcG*gacN-gcc:2*gcgT:5*aagS-gcgggtctgctcatc:1*gcgI*ggcD:1*gccV:2*gccG*ggcT:2*tccT-ttc*gcgG:1*gccN:2*accN:1*gggA*gccI:3*cccG:1*ctcD*gtcA:1*aacG*gccS:2+S:5*gccI*agcG*gcgG*aacK:1+GN:3*gccG:1*ggcA:2*ggaS*agcN:1*gtgG*ctgT*atcV:1*aatA*ggcN:1*aacT:2*agtD:2*actN:1*gcaG*cccA:2*acgA:1*ggcT:2*ggcS*ttaN:2*cagA*ctaG*ctaT:1*cgaS*gacA:1-ttcaacgcccccgccagcacgccactgcacaccctgcagcaacaaatcctcaacgcgatcaacgagcccacccaagccctcaccgggcgaccgctgatc:3-gccaac:2*ccgG:1*accR:1*gccG*gacS:5*tggD*ttgG*ttcI:1+GV*aacG:2*aacK:2*cacN:2*accD:1*gccE*gacV:2*gacA:2*tccA:2*gccS:1*ggaP*atcN*ctgT:1*ggtP-att:2*accN:2*tccQ:1-ggcatcggaacgacg:4*accS:2*accA:4-ttgctgatcggctccggc:1*accA:2*agcA:2*tttG*ggcA*ctgN*gacG:1*ggcA:1*gccN:2*cgcQ:1-ggtgacgccggcttgttcctc:2*gcaG:4*cagA*gccG:1*ctcA:1*caaS-aacttt*atcA*ggtT*gccN:2*accS*gccG:7-ctgttcgcc*aacD:2*gccS:5*tttT:1*gcgG*aatA:5*aacA*ggaA-ttgctcttc:1*gccD:2*accQ:2*gcgQ:1-acgctc:2*gacG:5*cacQ:2*ctgA*ttcG:7*gctN:2*agcN*agcI*ggcT:1*accG*ttcT*ggcA:1*aacT*ggcA:1*agcA*ggcA:2*gccG:1*ctaA*ctcA*gccG*ctcK:1*gccG*tccA:2*gccQ:2*agcT:1-ggcagcgccttaaatgtcggcgggacc:2*gtcT:2*aacQ:2*agtA:2*tcgD-ctcttcggcttc:8*tccD*agcR*ggcT*atcV:1*agcG*agcG+TVP*ggcA:1*accS:2*gacQ:2*acgN:2*gtgG*ttcG:1*aacA:2*gacQ:3*ggcD:1*tttG*ggcS*gctG*gacG*accD:2*aatD*tcgA-agctcggtccccaacgccgtgctgatc:1*aacT:8*aaaN*gccR*gN~gc744ag-ga:2*gcgN*gccG-ggcgtc*aacT:8*gccG:1*ggcA:4-ggcgggctcatcggcaac:5*gctS:2-gtcgccagcagt:1*atcT:2*tccN:5*aacD:1-atgctgttc:1*gccD*ggcA:1*gccN:2*gccN:1*ggcN:1*gtaT-gtagccctcacgggcggggccggc:1*gccN:2*gctN:3*gccG:1*ctgI-ctcttcggcgcc:2*gtcM:2*gccN:2*ttcA*acgG*aacT:2*gcaG*ctcN:2*gcgN:2*gccS:2*gccN:2-ctgttcgcc*accN*ggcA:1*gtcM:2*tccN*ggtS:1*gccT:2-tccggc:1*gccD:5*gctN:2*ctgA*ttcA:1*gccT:5*catD:2*ttcL*gccT-gacagcagcttcggc:1*gtcT:2*gccT:2*gccS:2*ctgT*ttcG:1*gcaD:2*gaaN:2*agcN:1*ggaA*cacD*agcN*ctgT*gtcA+NMTAQ:6*gccN:2*aatD*gccG:1*atgF-ctcgccctcggcgccgcg:2*gccG*ggcA:1*atcA:2*gacG:1*ggtL:1*ctcA*acgG:1*ggcN:1*ataT:2*gccQ:5*aacD*gctG-gggctgctcttc:1*tccN:1*ggcA*tccI:2*gccH:1*ggaP*ttcL*ggcT*ttcD*gccD*gacP:2*caaN:2*cccT:3-gccggcacggtcttcggctcc:2*gccT:2*aacT:2*gttA:1*cagI:1*ttcS*gccL:2-atcggtggggctggcggcaccccc:1*ctgT*atcG:1*aacD:8*gccT*agcG*gcgG*gtgE*accG:1*ggcE*aacV:2*atcA:4*gtgG*ttgA*atcA:4*aacD:2*agcT:2*attT:1*gcgG:1*aagD*gccG:1*gtgA:2*gtcT*agcG:1-ctgctgctcggtctagacggattcaatgctcccgcgagcacctcgccactgcacaccctgcagcaaaatgtgctcaatgtggtgaacgagcccttccagacgctc:2-cgcccgctgatc:1*aacT:1*gccG*aacL:1*actD:1*ggaR*accV:1*gctG*gacS:2*gccD:1-gggtggctgttcggcaacggcgccaacgggaccccg:3*gctG*gccS:3*ggcA-gggtggttgttc:7*cacN-ggtgcg*accA*aacG*accA*gccG*gccG*acgN*gctG*acgN:2*gccT:6-ttg*ttcG:7*accD*ggcA+EP:1*ataV*gccP*accP:4*atcA:4*ggcT*gccT:1-ggggtctccttgctgatc:1*tccK:7*gggS*aacG*tccT-ata:1*gtcS*gctG:1*atcT:2*gccD:2*cgcT:2*gacG*gccG-ggtttgctcttc:1*gcgN*gccG:3*ggcW*cacN:1*gccG*gctK:1-ggtgtc*ccgD*gccT:1*gtcS:2*gccG*ggcA:1*aacD:2*ctgK*ttcA*gccP*aacA:2*gccT:5*ttcD*aacG*gcaG:3*aacK:2*aacS:2*ctgV +NC_000962.3 miniprot mRNA 334160 338542 2173 - . ID=MP000066;Rank=1;Identity=0.4593;Positive=0.5052;Target=tr|Q6MWW7|Q6MWW7_MYCTU 75 1079 +NC_000962.3 miniprot CDS 336628 338542 1169 - 0 Parent=MP000066;Rank=1;Identity=0.4652;Donor=GC;Target=tr|Q6MWW7|Q6MWW7_MYCTU 75 630 +NC_000962.3 miniprot CDS 334160 335883 1004 - 2 Parent=MP000066;Rank=1;Identity=0.4527;Target=tr|Q6MWW7|Q6MWW7_MYCTU 631 1079 +##PAF sp|Q79FX6|MMAA2_MYCTU 287 0 287 - NC_000962.3 699930 560850 561711 624 861 0 AS:i:1076 ms:i:1076 np:i:234 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:287M cs:Z::1*tccV*gtgN*cagD:5*ggaE*aacD:25*tacH:3*gacE:4*cagE:14*aacG:1*gaaQ:20*gagA*aaaQ:11*gagK:3*ggtA:4*atgS:2*caaE:5*tccD:5*gagA:3*aaaQ:1*gacN:17*cagD:1*tacH*cacA*catD:2*gagA*gtgR*accA:1*cgcK*acgI:2*gccP:2*aagV*atgL:5*gtgT*cgcG*cccL:1*ttcR*aaaQ*gaaQ*ggcM*aggV*gaaD*aagH:2*acgP:2*cacL*gaaW:1*gttA*cacR:1*accL:3*ctgA*gccT:6*tggQ*ctgP:1*tccT:1*ccgE*acgM:1*cacE:1*tacQ*gccS*gagA:1*gtcT:2*cggT*gtcL:1*gcgR*gtcR:4*ctgP:7*atgL:2*acaE:2*gagQ*gccE*aacH:1*gatS*cagE:6*cagE*actE:2*gacE:14*cagV:2*accI:2*gacN:4*gaaA:1 +NC_000962.3 miniprot mRNA 560848 561711 1076 - . ID=MP000067;Rank=1;Identity=0.7247;Positive=0.8153;Target=sp|Q79FX6|MMAA2_MYCTU 1 287 +NC_000962.3 miniprot CDS 560848 561711 1076 - 0 Parent=MP000067;Rank=1;Identity=0.7247;Target=sp|Q79FX6|MMAA2_MYCTU 1 287 +NC_000962.3 miniprot stop_codon 560848 560850 0 - 0 Parent=MP000067;Rank=1 +##PAF tr|L7N670|L7N670_MYCTU 346 0 346 + NC_000962.3 699930 627247 628285 1038 1038 0 AS:i:1809 ms:i:1809 np:i:346 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:346M cs:Z::346 +NC_000962.3 miniprot mRNA 627248 628288 1809 + . ID=MP000068;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N670|L7N670_MYCTU 1 346 +NC_000962.3 miniprot CDS 627248 628288 1809 + 0 Parent=MP000068;Rank=1;Identity=1.0000;Target=tr|L7N670|L7N670_MYCTU 1 346 +NC_000962.3 miniprot stop_codon 628286 628288 0 + 0 Parent=MP000068;Rank=1 +##PAF tr|L7N677|L7N677_MYCTU 314 0 314 + NC_000962.3 699930 141199 142141 939 942 0 AS:i:1576 ms:i:1576 np:i:314 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:314M cs:Z:*gtgM:313 +NC_000962.3 miniprot mRNA 141200 142144 1576 + . ID=MP000069;Rank=1;Identity=0.9968;Positive=1.0000;Target=tr|L7N677|L7N677_MYCTU 1 314 +NC_000962.3 miniprot CDS 141200 142144 1576 + 0 Parent=MP000069;Rank=1;Identity=0.9968;Target=tr|L7N677|L7N677_MYCTU 1 314 +NC_000962.3 miniprot stop_codon 142142 142144 0 + 0 Parent=MP000069;Rank=1 +##PAF tr|O07248|O07248_MYCTU 443 0 443 + NC_000962.3 699930 389259 390588 1326 1329 0 AS:i:2267 ms:i:2267 np:i:443 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:443M cs:Z:*gtgM:442 +NC_000962.3 miniprot mRNA 389260 390591 2267 + . ID=MP000070;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|O07248|O07248_MYCTU 1 443 +NC_000962.3 miniprot CDS 389260 390591 2267 + 0 Parent=MP000070;Rank=1;Identity=0.9977;Target=tr|O07248|O07248_MYCTU 1 443 +NC_000962.3 miniprot stop_codon 390589 390591 0 + 0 Parent=MP000070;Rank=1 +##PAF tr|O07255|O07255_MYCTU 388 0 388 + NC_000962.3 699930 396200 397364 1164 1164 0 AS:i:2002 ms:i:2002 np:i:388 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:388M cs:Z::388 +NC_000962.3 miniprot mRNA 396201 397367 2002 + . ID=MP000071;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07255|O07255_MYCTU 1 388 +NC_000962.3 miniprot CDS 396201 397367 2002 + 0 Parent=MP000071;Rank=1;Identity=1.0000;Target=tr|O07255|O07255_MYCTU 1 388 +NC_000962.3 miniprot stop_codon 397365 397367 0 + 0 Parent=MP000071;Rank=1 +##PAF tr|O53650|O53650_MYCTU 219 0 219 + NC_000962.3 699930 236549 237206 657 657 0 AS:i:1100 ms:i:1100 np:i:219 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:219M cs:Z::219 +NC_000962.3 miniprot mRNA 236550 237209 1100 + . ID=MP000072;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53650|O53650_MYCTU 1 219 +NC_000962.3 miniprot CDS 236550 237209 1100 + 0 Parent=MP000072;Rank=1;Identity=1.0000;Target=tr|O53650|O53650_MYCTU 1 219 +NC_000962.3 miniprot stop_codon 237207 237209 0 + 0 Parent=MP000072;Rank=1 +##PAF tr|P95220|P95220_MYCTU 300 0 300 - NC_000962.3 699930 314866 315766 900 900 0 AS:i:1583 ms:i:1583 np:i:300 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:300M cs:Z::300 +NC_000962.3 miniprot mRNA 314864 315766 1583 - . ID=MP000073;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95220|P95220_MYCTU 1 300 +NC_000962.3 miniprot CDS 314864 315766 1583 - 0 Parent=MP000073;Rank=1;Identity=1.0000;Target=tr|P95220|P95220_MYCTU 1 300 +NC_000962.3 miniprot stop_codon 314864 314866 0 - 0 Parent=MP000073;Rank=1 +##PAF tr|P96827|P96827_MYCTU 95 0 95 - NC_000962.3 699930 176667 176952 285 285 0 AS:i:482 ms:i:482 np:i:95 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:95M cs:Z::95 +NC_000962.3 miniprot mRNA 176665 176952 482 - . ID=MP000074;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96827|P96827_MYCTU 1 95 +NC_000962.3 miniprot CDS 176665 176952 482 - 0 Parent=MP000074;Rank=1;Identity=1.0000;Target=tr|P96827|P96827_MYCTU 1 95 +NC_000962.3 miniprot stop_codon 176665 176667 0 - 0 Parent=MP000074;Rank=1 +##PAF sp|P9WFM5|Y205_MYCTU 367 0 367 + NC_000962.3 699930 243383 244484 1101 1101 0 AS:i:1787 ms:i:1787 np:i:367 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:367M cs:Z::367 +NC_000962.3 miniprot mRNA 243384 244487 1787 + . ID=MP000075;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WFM5|Y205_MYCTU 1 367 +NC_000962.3 miniprot CDS 243384 244487 1787 + 0 Parent=MP000075;Rank=1;Identity=1.0000;Target=sp|P9WFM5|Y205_MYCTU 1 367 +NC_000962.3 miniprot stop_codon 244485 244487 0 + 0 Parent=MP000075;Rank=1 +##PAF sp|P9WI15|PPE24_MYCTU 1053 0 1053 - NC_000962.3 699930 427419 434679 1365 3356 0 AS:i:1574 ms:i:1765 np:i:592 fs:i:2 st:i:0 da:i:0 do:i:2640 cg:Z:177M6I18M6I49M6D23M1101U31M3D140M2D21M1D22M10D16M1I13M1906N29M1I22M11I18M4I20M2D51M2G35M19D15M4I6M2D10M4I3M1I16M2I16M2D7M1042U33M2F17M15D5M3I9M1I4M1D38M2D28M1I53M1I59M cs:Z::1*agcN:1*gcgS:9*cgcL*ctgI*tacF*gtgA:3*ttgP*gcgE:2*ctgA*gacA:2*gccT:6*gacM:2*ggtA:6*tcgG*gcgS:2*gcgS:2*gcaV:1*tccG*tcgA:1*ctgQ:2*gcgS:1*acgS:2*acgA*ggaA:5*ctgA*ggcA:2*agcA:3*gcgV:2*cagE:1*gcgT:1*accA:1*accA*cggA*ctgA*gcgM*gcgI:1*gccE:3*gccV*ctgK*gcgT:1*acgV:1*catQ:1*gcgM*atcL*atcV*tcgA:4*ctgD*ttcL:4*gtcM:3*ctgF:9*accI:2*gccT:6*cagA:2*gcgS:2*tttS*ggcA:7*gccI*gtcA:3*acaS:2*ggcS*cagK*gcgP:1*ccgQ*accN*gtgL:2+LPAWLA*ggcS:2*ctgP*gtcA*agcA:1*gccM*gcgT:1*cagA*gtgA*accG*acgI*cggP*gtcA*ttcL*cgcA+GGPTAI:3*ttgI:4*gagG:5*ggtA:1*gtcN:1*aacL*ttcA:1*ctcI:1*tcgN:2*atcL:2*ggcY:1*atcF:4*atcF:1*agcN:4*tttS*ggcA*aacS*gtgL:1*cctN-gggttgaccgcagcgctg:7*accL:4*atcV:1*tttV:2*accL:1*agcN*aacL:1*atcT*gG~gc1098ag-gc:5*aacL*aacG:1*atcF:2*gccG:11*tccT:1*gacN:2*cagI:1*ttcI-aatattgct*agcG:1*tggL:6*agcF:6*accS*aatG:3*atcF:2*gcgS:1*accN:2*gtcF:2*gcaG:3*accN*gggF:1*tggT:1*atcG*gggW:1*ccgS:1*accH*gacG:3*atcF*ctcF:4*tacF:3*atcM:1*aacD*gccV:1*gacN*ttcA:3*ttcS*tacL:6*accM:1*ggcD:2*gtcP:1*aacS*accS:3*aacT:2*gtgT:1*gacN*accA:3*agcF*tatL:1*ccgA:1*gacN*accI:3*ttcV:2*cccI:1*aacH*gtcM:1*accN:1*gctL:1*gacN:3*ttcM:3*ttcV*ttgF*gtgY*gcgR:1*gatV*aacG:2-cagatt*gccS*atcL*gatQ*ctcF:1*gtcI:3*ttcD*atcL*cccT*ataL*aacP*gagP*cagL*atgQ*gtcI*attP*gacG*gtaI-cac*aacS:1*atgP*accA:1*ggcS*ggcL*aacP*atgA:2*gtcL*accP*gagS*gccL*tcgN*accI*gttP*ttcA*cccA*caaT:1-ttctatctgagcggtttgttcttcttcggc:1*gtcA:1*ctcI*agcT*gcaV*tccG*acgA*ctgF*accS*gttL:1*acgG*atcL:2+P*accS*atcL*ggcN*ggaI:1*acgA*gtgA:1*gtcT:1*atcA*agcN:1~gt1906ag*gcaT*accV*tggG:1*gctF*acaS*actL*tcgP*gatG*tcgL*gcaT*acgL:1*gcgS*actL*tcaN*accI*tggP:1*tcgA*ccaT:3*acaN*acaI:1*tcgV:1+A*ttgF*ccaS*acaL:1*gcaG*acaL:1*acaL*tcgP*gtaS*tcgL*gccN*tgtI:2*acaA:1*agcT*aggP:1*tcaN:1+TVGAFSLPGLT:2*gtgS*gctL*ggaN*actI:3*gcaT:1*gcgP:1*tgtN*tcaI:1*ctgV*gcaG+AFSL:1*acaG*acaL*tcgT*gttL*tgtP:1*actL*cggN*gcaI:2*acaA*tcgT*gcaT*tcgP:1*actN*cggI*gcaT-ccggaa*actV*gggS*gcaG*tcgF*ccaQ*acaL:1*gtgP*acaL*ccaS*acaI:1*gcaS*tctV*tcaA*acaI:1*gcgP*acgV*tcaT*acaV:1*gctP*tgcI*tcaT*acgV*ccgG:1*acgF*tcaN*acaL:1*gcaP*tctL*tcaQ*acaI:1*gccE*attV:1*acaI:1*gcaQ*gctL*tcaT*acgI:2*gctG*tcaI:1*cgI*gccG:2*aacS*ccgL*ggtP*agcA*tacI*aacH:1*ggtQ*tatP*ttgI*aacT*accV:1*agcQ*tacI*aacG*accV:1*ctgQ*gccF*aacG*tcgL*ggcP*gatS*gtcI*aacG*accW*ggcD*ggcV:1*atcL*accS-ggcaattacagcaacgggttctggtggcggggcgattaccaaggcctggcggggatc*agcT*caaP*acgR:4*gacA*accF*gccG*gttI:1*gtgF*aaaT:1+QFQT*cacN:2*atcA*ttcL*ctcQ-gatatc:1*gtcP*accG:1*acaG:1*ggcS:3+NGAL*gttI*catF:1+E:1*agaD*ttcL:1*gagQ*atcL*accV*ggcV*gatH*atcP*ttcY*ttgT*atcL*ggcT*ataG:1+IV*ttcI*aatG*gccS*gccF*acaF:1*gatP:2*agtN*ttcI:1*aacG:1*tcgD*attV-gtcctt:1*aatA:1*ggcN*atcV*aacD*ctgG*gF~gt1039ag-ct:1*acaL:1*gcaQ*gcaI*ccaT:3*gctI*tcaT:1*acgP*gcgE*actF*tcaA:2*gctP*tctI*acaG*acaV*ccgG*gcgG*actF:1*acaL:1*gctQ*tctI:2*ccgQ-gc*gacE*gtgI*aacI:1*ggcP*gccE*ttcL*atcT*gggI*ggcN*aacS*ttcI*agcG*aacV:1*gccG:1-tggcagagcgatcaccaaggccagtggggcgcacactacgcaatc:1*gttL:3+TTP:1*ctaI*ctgT*aacT*tttP*agcP:1*aacT:1+D:1*gtcI:1*atcL-ccc*atcT*catG*ctcF*gacT*ttcL*ggtP*accQ*cttI*gccT*gtcT*aacP*ggcP*ttcI*cagT*attT:1*gctP*atcL:1*ctcI*cgcD*gccP*ctcI*gggN*gtcL:1*cacG:1*agcT*gtcL*ggaP*cccQ:1*atcT*gttT:1*aggP:1-gccggc:1*ttaT:1*gtgP*atcL*gatT:1*aacE*atcP*ggcI*gacG*cccV:2*tcaF*tccT*tcgT*ataP:1*atcL:1*atcV*accP*agcG*ggcI*gccH*ggcL:1+S*gtcT*gtcT:1*ccgG*ctaA*ctgF*gacA:2*ccgG*gccG:2*ttcY*ggaF:2*accS:1*ggcA:9*accA:1*agcG*tcgN:5*gtcN:1*gccS*aacG*aatL:2*ttcW*tggF:2*gctN*ttcP:2+L*ataL:1*aacG:2*ttgY:4*tcgG:1*caaS:2*tggF*gcgS:3*aacS*accG:4*tacA:1*accR*agtG*gcgI*gcgL*gacP:1*gcgS*acgV*ccgA*gctS*aacV*ctcV:2*ctcF*tccA:1*gtcI:1*gccT*gacN:1*accA:1*gtgF*ctcF*cgcQ:1*ccgT*aacT*gggS +NC_000962.3 miniprot mRNA 427420 434679 1765 - . ID=MP000076;Rank=1;Identity=0.4067;Positive=0.5292;Frameshift=2;Target=sp|P9WI15|PPE24_MYCTU 1 1053 +NC_000962.3 miniprot CDS 433860 434679 772 - 0 Parent=MP000076;Rank=1;Identity=0.5734;Donor=GC;Target=sp|P9WI15|PPE24_MYCTU 1 279 +NC_000962.3 miniprot CDS 431983 432761 585 - 2 Parent=MP000076;Rank=1;Identity=0.4808;Target=sp|P9WI15|PPE24_MYCTU 280 524 +NC_000962.3 miniprot CDS 429255 430076 90 - 0 Parent=MP000076;Rank=1;Identity=0.2351;Frameshift=1;Target=sp|P9WI15|PPE24_MYCTU 525 800 +NC_000962.3 miniprot CDS 427420 428215 318 - 2 Parent=MP000076;Rank=1;Identity=0.3510;Frameshift=1;Target=sp|P9WI15|PPE24_MYCTU 801 1053 +##PAF sp|P9WI41|PPE10_MYCTU 487 0 487 - NC_000962.3 699930 530753 532214 1458 1461 0 AS:i:2496 ms:i:2496 np:i:487 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:487M cs:Z:*gtgM:486 +NC_000962.3 miniprot mRNA 530751 532214 2496 - . ID=MP000077;Rank=1;Identity=0.9979;Positive=1.0000;Target=sp|P9WI41|PPE10_MYCTU 1 487 +NC_000962.3 miniprot CDS 530751 532214 2496 - 0 Parent=MP000077;Rank=1;Identity=0.9979;Target=sp|P9WI41|PPE10_MYCTU 1 487 +NC_000962.3 miniprot stop_codon 530751 530753 0 - 0 Parent=MP000077;Rank=1 +##PAF sp|P9WJT5|MMPS1_MYCTU 142 0 142 - NC_000962.3 699930 483230 483656 426 426 0 AS:i:733 ms:i:733 np:i:142 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:142M cs:Z::142 +NC_000962.3 miniprot mRNA 483228 483656 733 - . ID=MP000078;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJT5|MMPS1_MYCTU 1 142 +NC_000962.3 miniprot CDS 483228 483656 733 - 0 Parent=MP000078;Rank=1;Identity=1.0000;Target=sp|P9WJT5|MMPS1_MYCTU 1 142 +NC_000962.3 miniprot stop_codon 483228 483230 0 - 0 Parent=MP000078;Rank=1 +##PAF sp|P9WK11|MEND_MYCTU 554 0 554 + NC_000962.3 699930 646297 647959 1659 1662 0 AS:i:2837 ms:i:2837 np:i:554 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:554M cs:Z:*gtgM:553 +NC_000962.3 miniprot mRNA 646298 647962 2837 + . ID=MP000079;Rank=1;Identity=0.9982;Positive=1.0000;Target=sp|P9WK11|MEND_MYCTU 1 554 +NC_000962.3 miniprot CDS 646298 647962 2837 + 0 Parent=MP000079;Rank=1;Identity=0.9982;Target=sp|P9WK11|MEND_MYCTU 1 554 +NC_000962.3 miniprot stop_codon 647960 647962 0 + 0 Parent=MP000079;Rank=1 +##PAF sp|P9WKL3|Y559_MYCTU 112 0 112 - NC_000962.3 699930 650409 650745 336 336 0 AS:i:590 ms:i:590 np:i:112 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:112M cs:Z::112 +NC_000962.3 miniprot mRNA 650407 650745 590 - . ID=MP000080;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKL3|Y559_MYCTU 1 112 +NC_000962.3 miniprot CDS 650407 650745 590 - 0 Parent=MP000080;Rank=1;Identity=1.0000;Target=sp|P9WKL3|Y559_MYCTU 1 112 +NC_000962.3 miniprot stop_codon 650407 650409 0 - 0 Parent=MP000080;Rank=1 +##PAF sp|P9WLD5|Y2302_MYCTU 80 0 80 + NC_000962.3 699930 661002 661242 141 240 0 AS:i:228 ms:i:228 np:i:55 fs:i:0 st:i:0 da:i:0 do:i:24 cg:Z:80M cs:Z::1*aagH:5*tggY:2*atcV:2*gcgT:1*ataT*gatE*caaR*ccgH:1*cacQ*cgaH*gggA*ttgE:6*tccA:11*gagV*accN*gacG:1*gtgE*gcgT:2*attY:2*ccgS:7*gagT:1*cagH*aatA*gcgE:1*gacE*gagK:2*cagA*catA:1*ttcA:1*gcgH*gttA*cagA*tcgT +NC_000962.3 miniprot mRNA 661003 661242 228 + . ID=MP000081;Rank=1;Identity=0.5875;Positive=0.6875;Target=sp|P9WLD5|Y2302_MYCTU 1 80 +NC_000962.3 miniprot CDS 661003 661242 228 + 0 Parent=MP000081;Rank=1;Identity=0.5875;Target=sp|P9WLD5|Y2302_MYCTU 1 80 +##PAF sp|P9WMY5|MGTA_MYCTU 378 0 378 + NC_000962.3 699930 648535 649669 1131 1134 0 AS:i:1958 ms:i:1958 np:i:378 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:378M cs:Z:*gtgM:377 +NC_000962.3 miniprot mRNA 648536 649672 1958 + . ID=MP000082;Rank=1;Identity=0.9974;Positive=1.0000;Target=sp|P9WMY5|MGTA_MYCTU 1 378 +NC_000962.3 miniprot CDS 648536 649672 1958 + 0 Parent=MP000082;Rank=1;Identity=0.9974;Target=sp|P9WMY5|MGTA_MYCTU 1 378 +NC_000962.3 miniprot stop_codon 649670 649672 0 + 0 Parent=MP000082;Rank=1 +##PAF sp|P9WNF7|MYMA_MYCTU 495 5 487 - NC_000962.3 699930 656012 657440 645 1449 0 AS:i:1085 ms:i:1085 np:i:295 fs:i:0 st:i:0 da:i:30 do:i:0 cg:Z:113M2I77M4I82M1D141M1I62M cs:Z::2*gtcL:1*gtcI:3*atcL:2*ctgI:1*gcgT:1*tacC*cggH*atcV*atcT*gaaA*cgcE*aacF:1*cagD*ctgK:1*tacI*accA*atcL:4*gcgE:1*atcL:16*agcD*atcM:2*ctgF*tcgG*tttY*cccK*tacF*gagR:2*accR*cgcD*gaaV*gaaK*ggcV*atcL:4*cacS:2*gagQ:1*ctcI*accA:1*atgT:1*cacT*aagE*tacF:1*atcV:1*cgcE*cacK:1*gagH*ttcY*aacG*agcL*tacK:1*cgcN*gcaT:1*gacE:1*gacS:1*tccR*accQ*gatC*accR:3+AG*accV*ttcH:1*cagA*aacT:1*gtgE*cacT*aagR*cacT:1*cgcT*agcC*cggD*ttcY*gtgL*ttcI*ttcS*ggcC*agcT:6*gagA:2*accL:3*ggaP:1*atcV*gagH*aagR:3*gcgR*gtaC:12*accS:3*atcV:12*atcV:1*tcgA*ctgM*accA+GSNP*gacG*cggS:1*gaaA*aagH:8*accS:1*ctgI*atcF:1*gcaL*tccP*aaaA*tacV*agcD*acgK*ttcI*gccS*gccE:1*gttL*cgtG*aaaR*gcgF:2*cccD*aaaR*actW*tctV*cacY*ttgE*attF*gtcG:1*atgR*tacR:1*gcgI*ttaA*ttgI*gaaQ*gcgR*gtgK*ttcL*tggY*ttcQ*ttgA*tccC:1*aagR*acaW:1*gtgK*ttcL*gtgM*aaaR*tggR:2*cgcL*cgtW*accE*gcgV*atcR*aaaR*aatR:1*cccG*gagR*ggcS*tacV:1*atcM-gaa*accS*cacN:3*cggN:1*aacL:3*cagE:3*ctgA*atcV:1*gacN*gccG:2*tacF*aacK*gccT*atcL*accA:2*cgcA:1*gagS:4*catQ:1*gacE*cacT:1*gacT*gccE*accK:2*gcaL*ctcC:3*gggR*cacE*ctcI*gatE:10*cagN*ttgI:1*gcgM:3*gccM*gcgR*atcL*agcI*ctcV:2*gtcA:1*atcY*gacQ*cctL*cggP*gatE*cgcK*tttM*gtcT:2*gcgG*cacV*atgL:2*gacN*gtgA:3*ttcA:1*tgtI*gtgI:9*cgcK*gccS:1*atgI*acgA*gccG*cggA*gcgY*acgL*gcaC*aaaR:2*gcaR:3*gccD*catN:1*cacY:1*cgcV:1*gccT:1*cacR+D*ctgA*ggcQ:1*gagC*ccgA*atgL:1*gagV*aaaG*ccgM*tccF*tggD*gacQ*attL*cagN*gccS:5*gcgG*ccgQ*tacD*gcgI*ctgM:1*aagR*tccQ:1*accS:1*cggH:2*aatR:1*cgaL*cagM*aacH:1*ttgE*gccK:2*atcK*gacI*tacL*cgaL*ttcE:1*cgcP:1*gagD*gagD*gcaG*atgV*gtgL*ttcH*ggcF:2 +NC_000962.3 miniprot mRNA 656013 657440 1085 - . ID=MP000083;Rank=1;Identity=0.4451;Positive=0.6108;Target=sp|P9WNF7|MYMA_MYCTU 6 487 +NC_000962.3 miniprot CDS 656013 657440 1085 - 0 Parent=MP000083;Rank=1;Identity=0.4451;Target=sp|P9WNF7|MYMA_MYCTU 6 487 +##PAF sp|P9WP95|COBQ_MYCTU 494 0 494 - NC_000962.3 699930 306376 307858 1482 1482 0 AS:i:2552 ms:i:2552 np:i:494 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:494M cs:Z::494 +NC_000962.3 miniprot mRNA 306374 307858 2552 - . ID=MP000084;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WP95|COBQ_MYCTU 1 494 +NC_000962.3 miniprot CDS 306374 307858 2552 - 0 Parent=MP000084;Rank=1;Identity=1.0000;Target=sp|P9WP95|COBQ_MYCTU 1 494 +NC_000962.3 miniprot stop_codon 306374 306376 0 - 0 Parent=MP000084;Rank=1 +##PAF sp|P9WQE1|PPSE_MYCTU 1488 7 1020 + NC_000962.3 699930 486054 489048 1044 3114 0 AS:i:1183 ms:i:1164 np:i:504 fs:i:0 st:i:0 da:i:324 do:i:888 cg:Z:15M1D27M9I58M1D13M2I4M3I9M1I5M4I58M1D11M1I58M1I59M1I67M2D26M1D16M4D39M7I5M1I3M2I14M2D149M1D103M1I43M1I19M3I32M1D24M4D24M1I21M6D25M1D32M2I14M cs:Z:*gttI:2*atcV:1*gtgM*ggcA*tgtG:4*gatA*attK:1-ggc*ccgV*gaaS*cggA*ctaF:1*gacS*tttN:1*accR*gagR*aagG:1*tgtE*gcgS:1*acaV*gcgT*tatL*ccaS*gatE*cgtQ*gggE*ttcL*acgR*aatD:2+VSDKTLADP*actA*ttcY*gcgV*gagR*tccR*ggaA*ggcP*tttL:1*aagD*gatG*gtcI*gcgD*ggtE:2*aatA*agaG:2*gatG*atcF:2*gacL*gagA:1*ctgQ*cgaV*atgL:3*caaH:2*ttaF:1*gagQ*gtcC*tctA:1*gaaH:3*catD:2*attA*attD:1*gagA*tcaR*ttaF*agaD*cttG:1-cgt*acgI:2*ttcY*gttG*gggT*gtgS:1*tcaP*actS*gacG:1*gtcL+LH*cggN:1*gtgL:1+HRD*gctP*agcN:1*cagV*caaL*aagA*tctE*actG*attL+N*tggF:1*aacQ*accF*ggcS+LFLQ*ggtN*tctD*tcgK*agtD*attF*attL:1*aatT:3*tacH*tttA*ctcF*gatN*attL*cagR:4*gtcA*attV*gacQ:14*cgaL:2*agtL*accS*tggG*gacE:2*atcM:2*gtcA:2*acgS*aatS*gttL*cttC:1-tca:1*gaaH*ccaR*tggV:1*gggY:1*aggT*gaaS*gcgP:1+S*atcM*ttgV:1*cagA*acaV:1*tgcH:1*cacR*gcgP:2*aaaV*tccR:3*atgT:1*cgcF:1*gagS:1*tgcV:1*gttL*atcV:2*cagK*cgcP:1*agtA*gatA:1*cgcI*cttD*gagA:1*cggD:2*ttaH:1*attV*ctgI*acgR:3*gtcI:1*cagN:2*aagS*tccA*aacK+M:1*attY*atgA:4*agtA:2*attA*ggtD:1*cttI*gaaA*aatE:1*tgcH*aagA*agcV*gctS*cgcG*gtcI:1*ccgS*ctgS*gaaT*atcV*ggcS:3*gccC:5*tcgP:3*aggP:2*gcgI*cacQ*gccG:1*ggcR*atgA*gtcA:1*ggtE*cgcV*aagS*agaQ*ccgT*ggaS+R:1*gggA:1*ctgC*atgV*atcL:2*atcV:1*ccgS:6*ggtV:9*gcgT*gtgI:1*atgC*gttL*gagK*cgtN*ggcK*tcgA:1*cttP*ccgA*agcT*gggL*gggH*tttY:1*gagS:3*gctE*atcL*ccaR*ttcL*acgD*gaaQ*ttgS*ggcP*ctgF*agaV:1*gtaQ*gacS*gaaK*cttY*cagG*gagP:1*ccgE-gtggtg*gcgC*ggtD*cggG*ccgV:9*tttV:7*attV*gtcL:3-ggt*tcgP*gttA*gggE:1*gacS*acgE:2*ggcA*cgcH:1*gatE*gttP*ggcA:1*tccP-ggtggtggggtg*gtgQ*gcgV*tggI*gtgL*attL:1*gggA*aagQ:2*tcgA:2*gctG*gctE*cagS*gcgR*ggtT*cggA:1*gggA*cggA*tatA*gtgL*cggE*gctT*cggQ*ccgD*gcgG*cttP*gatR*gttL*gttS:2*gggA:1*tcgT:1+ARRRKHN:1*agcT*acgM*cggA*tcgA+V:1*tttH:1+RE:1*cggA:1*gtgT:1*gtcL*ggcR*cagA*actA*cgcE*gatH*gagD*ttgN*ctgV-gctggg*ttgF*gctV:1*gtgE*gttA:1*ggtH*cggD*ccgG:1*gctH:1*gtgD*gtcR*tgcA*ggtD*gttA*ggcA*aagP*ccgT*gcgS*ggcD*aagR*acgV*gctV:1*gtgL:1*gccP:3*tcgA:1*tggH*ctgV:2*ggtA*agcK*gagG:2*gctD*gccT*tacE:4*gagQ*gccH*ctcF:1*gctT*gtgC*gtgA*gacA*gagG*ttgF*gacR*cggD*cacE*ctgT*cggG*tatI*ccgD:1*cgcH*gatA*gtgE*atcV*tggF*gggD*cacG*gacT*caaA*gatT*ctgD:1*aatE*accR*accI*gaaD*ttcR*gccS:5*gcgT:2*gtgY:2*tatA*cggK:1*ctcV*atgD*tcgT*tggF:3*ccgA:1*ttgA*gtgY*ctgI:1*catY:1*gtgT:2*ttgY*gccI:2*cacT*gtcL:2*gcgV*ctgF*tgtD:1*ccgQ*gatT:1*gcgI*atgK*ctgT:1*gccS*gcgL:1*ggaA:3*cagH*gcgE*ttgS:1*gccP-ggc:3*tttV:2*cagA*gccL*cgtG*gaaP:1*gagD:1*gcgT*ccgQ*atgY:1*gggP*cacP*gatE:1*agcE*atcL*gcgS:3*ggtD:1*gctG*tcgN*gtgC:1*atcV*tctA:1*gccP*cacK:1*gcgQ*gtgI*agcR:1*atcL*gctR*gatQ:2*cgcT*ggcE*cagA:1*cgtI*cggP:1*cacR:1*ttgV*gcgR*gtcA*tcgT:4*tcgT*gcgS*ttgA:1*gagD:2*atcL*gctG*gagQ:1*acaQ*gccE*gttF*gcgL*gccS*gaaR*ctgQ*tctQ*gtgL*ggcR*ttgP:1*acgR*atcT:1*gtcL*attL:2*gtgL:2*cagS*ttgW*gtgM*gccS:1+Q*gacQ*ttcV*gccV*tcaD*gctP*gatA*tacS:1*gccT:1*catQ:1*cggS*gcgS*gtgP*gtgI:2*ggcA:1*agtE*gttL*cgtD*agtV*gccV*cacL*tgcA:1*ggtP*gccS*agtR*cgtI*ttcL*atcV:6*ggcS:2+G:1*ttgA*atcM*gagR*gcaH*tcgP*ctgK*gccW*gacS*gcgT*cagT*atcH*gtgR*tcgT:1*cccR*acgL*ctgM:1+HPL*aaaQ:1*cggV*cccD*gaaD*ccgR*gtcD*agtT*gtgF*atgL*acgR:1*gcgL*gccG*cagE*ggcL*ttcW*gtcS*tcgA:1*atgV*ggcE*ctgV:2*gccT*tcgP*gtgR*tttR*tccP*gggA*tacV-cgg:1*aagH*cggL:1*gagS:2*acgG:1*gccP:1*cagA*catR:1*aagR*ttcH:1*ctcV*gcaE:1*gccN*ccaH*tcgT:1-agcgaccccacc*gccW:1*ggcQ*cagA*atcP:2*agcN*gatN:1*ggtS*gctP*gaaA*ctcG*ttgT:1*tccD*tccG*gggS*tttT:2*cggT*ctgV+D:1*ggtA:1*tcgN*gccG*gacE*gagS:1*ctcT*gccE*gcaV*gcgT*atcL*gagQ*gtgR*gtaI*tgtW*gagS*catQ*gccC*gcaL-gcggtgctggggcgcgac:1*gctV*gccS*ggaS*ctcV:1*gctR*ggcN*cagA*gcgN:1*gccF:1*tcgL:1*tttG*aatD:2*agtM:1*gtgI*gagS*ctaI*cgtA-aac*cgcM*ttaA*acaA:1*gtcN*accE*gcaG*gtaL:1*ctgI*ccgT*gccP*accQ*gcgD*atcL*ttcY*gatE*cacY:2*ccgL*accA*gaaS:1*gccT*cagA*tatA*ctgV*atcD*accA*caaS*ataF+AS*gacS:1*cacL*ggcA*agcK*tccP*gccP*gccE:1*gcgQ:4 +NC_000962.3 miniprot mRNA 486055 489048 1164 + . ID=MP000085;Rank=1;Identity=0.3353;Positive=0.4855;Target=sp|P9WQE1|PPSE_MYCTU 8 1020 +NC_000962.3 miniprot CDS 486055 489048 1164 + 0 Parent=MP000085;Rank=1;Identity=0.3353;Target=sp|P9WQE1|PPSE_MYCTU 8 1020 +##PAF tr|Q79FE6|Q79FE6_MYCTU 361 0 361 - NC_000962.3 699930 334801 336310 651 1095 0 AS:i:911 ms:i:993 np:i:246 fs:i:0 st:i:0 da:i:0 do:i:1362 cg:Z:97M7I46M1I5M459N53M1I7M3D62M1D38M3I14M3I24M cs:Z::3*gtgL:2*gcgS:2*gttA*atcL:2*gcgT:2*gatY:1*gccT*agtG*ctcI:2*agcA:6*gccV:3*aacP:2*gcaE*ctgI*atgL:3*gccT:7*gccS:6*ggcA:8*caaH*gcgV*cagA:3*gccD:3*cagH*gcaT:2*tccA:1*ggcA:1*gccS:1*gcgM:6*gtgA:2+LQALQLE:2*gatN*ccgA:2*gagA*ttcP*ttcT:2*aatL*accL:6*aacD:1*gccT*aacD*ggcA:3*accS:1*gccG*aatA:2*gacA:2*tggI:6*gccT:2+A:1*ggcD*gcgL:2~gt459ac*agcT*agcG*ttcR:14*gcaI:2*gaaA:2*agcG*ggcC:1*cacS*agcA*ctgV*gtcA*gccI:8*aatA*gccG:1*atgV*ctcF*gccS*ctcG:1*gccG:5+D*ggaA:3*gacS:2-actctcacg:3*ataT:2*gccL*ggcL:1*gccG:2*aacG:2*ctgG*ctcA*ttcG:1*tccA:2*tccN:2*gccG*ggcA*ggaS*ttcN*ggcS*ttcA*gccS*gacI:2*caaD:2*cccS:2*aacA*gccG:1*acgM*gtcL*ttcY:1*tccA:2*gccV:5*gttA*ggcA*cagV*ggcA*ttcI-gcc:2*atcD:5*accR*cccA:1*ctgA:5*aacD:5*gccT:1*gcgN*gtgT*accP:2*aacS:2*atcD:2*accN:1+GNA*gtgG:9*agcN*ggtA*gggE:1+VIS:1*gcgG*ggcS*aagV:2*gtgT:2*gtcN*agcG:5*ctaF*gacN:1*ttcT:1*gctG*cccL*gcgP +NC_000962.3 miniprot mRNA 334802 336310 993 - . ID=MP000086;Rank=1;Identity=0.5945;Positive=0.6740;Target=tr|Q79FE6|Q79FE6_MYCTU 1 361 +NC_000962.3 miniprot CDS 335867 336310 452 - 0 Parent=MP000086;Rank=1;Identity=0.6410;Target=tr|Q79FE6|Q79FE6_MYCTU 1 156 +NC_000962.3 miniprot CDS 334802 335407 541 - 0 Parent=MP000086;Rank=1;Identity=0.5598;Acceptor=AC;Target=tr|Q79FE6|Q79FE6_MYCTU 157 361 +##PAF sp|L7N697|PE16_MYCTU 528 0 521 - NC_000962.3 699930 177581 179195 696 1668 0 AS:i:931 ms:i:931 np:i:308 fs:i:0 st:i:0 da:i:30 do:i:36 cg:Z:94M1D16M8D108M1I112M1I15M2D21M2D5M4D11M18D59M13I32M3I30M cs:Z:*ttgM:1*tacF:3*cagV:1*tcgE*gtaM*ttgV:2*gcgT:1*accS:3*gggS*atcL:1*tcgA:1*atcL*aacS*cagE:4*gtcA:1*gccI:3*ggcQ*ctgV*gcgL:8*acgA:1*cttI:1*acgE:4*tacH:2*cagE:3*atcL:3*gttA*gcgS:3*aacD*gaaR:1*accV*cagR*aggA:1*gcgS:3*aacG*gcaW*tttY:1*aatD:3*accA:1-acg*agcA:3*cagD*gagT:1*acgA*gccT:1*ctcA*tttS*aagE*ccaL*accG:1-cccccggtgctaccgccaatgttc*aacG*caaG*aatR:2*atcL:1*atgL:1*ggcS:2*tcaT:1*ataR:1*acgP*ccgF*agtD:1*gtcM*aacQ*gccQ*atcV*acgY*accD*ttgR*ttcY:1*gacA:1*gtcH*gtcY*tcgL*aatG*ccgY*gtcA*gtcF*aaaS*gcgG:1*gtgY:2*gaaA*gagQ*ctaF*tatQ:1*atcW:2*gtcI*aaaP:2*cccT*ttcY*caaD*accQ:2*cagA*ttgE:1*ctaA*cagG*attY:1*gacH*ggcT:2*tggM*gagQ:1*atcV*aacA:3*cacD:1*accV:1*ttcL:1*tatF:2*agcG:1*gtcS*atcV:1*tccT:3*cagR:2*atcA:2*ggtP*cccA*aacG+V:4*agcD:2*aatS:1*atcV:1*atcL:2*gagP*atgN:9*ataF:3*aatY*gtcL*accQ*accS:3*ccgT:1*tacN:5*aatT*cccD:1*ccgA:2*accI:2*ctcT*gagQ:8*cggK:4*gtcI:1*tccA:1*atcV:2*gtaL*ttcL:2*ctcY*acgY*gtgS:1*accS*acgL:1*gcgY*gacG:3*gcaE:1*ataV:2*gccG*acgI*cagV:2*acaV*cagS*ggcS*acgP*acgD*tcgT:2*tacT:2+L*attL*gaaP*accN:1*catD:4*gccQ:3*gcaG:1-ccggtc*attV*ggcP*ccaE:2*gcgL*gcgD:1*gtcI:2*aacD:1*gaaR*gtaA:1*gtcI*aatE:3-ggcgac*ccgD:1*ttcT:2-tcgacgagcccg:1*aacD:4*ttcA*gggA:3-gatgtcccggcgagcgttgtcgccgatgccctggttgccggaacgcaacagggc:1*aacH*gacI*ttcD*atgP*gtcI*gagA*ttgV:1*gccP*gccQ*ctgI*aacG*accA*ctgA*cccI*caaG*actG:1*atgL*cccT:1*ttcL*ccgD*ccgG*tatL*gtgL*ccgD:1*ctgV*ctaI*ccgN*ccgD*ccaQ*ccgL*ccgN:1*caaV*ccgV*gcgT*acgS*ctcG:1*aacY*atcQ:1*gacG*actA*ttcE*gctL:2*gtgA*tcgA*accA:2*tcgG*attA+PAGVTNAIFIGQQ*cttV:2*acgI*gcaL*gatV*ctaE:1*cttP*gccG*ttcA*gtcL*actV*atcT*ctgA*cccD*gccT*tatH*gacY:1*accV*ctgD*ttcA*gtgI*aatQ*caaD:4*aacD:1+SGF*cgcN*gctQ*gcgN*atcL*gagQ:1*ccgI*ctcP:1*gccT*accN:1*gggA:1*gccL*gccV*ctgF*ggcA*ggcA*atgG:1*gaaP*ttcA*atcV:1*attA:1*gtgA*acgI:1 +NC_000962.3 miniprot mRNA 177582 179195 931 - . ID=MP000087;Rank=1;Identity=0.4173;Positive=0.5540;Target=sp|L7N697|PE16_MYCTU 1 521 +NC_000962.3 miniprot CDS 177582 179195 931 - 0 Parent=MP000087;Rank=1;Identity=0.4173;Target=sp|L7N697|PE16_MYCTU 1 521 +##PAF tr|O06536|O06536_MYCTU 113 0 113 + NC_000962.3 699930 265572 265896 150 339 0 AS:i:201 ms:i:201 np:i:66 fs:i:0 st:i:0 da:i:66 do:i:396 cg:Z:45M1I23M4I40M cs:Z:*ttgM*atcV:6*aaaE:1*aagR:4*gccG:3*cggI*ggcV*ttgV*gccG:2*atgL*gatE*cagE*cttA*gacH*ggcD*gatN*gccP*ggcD*ctgV*tcgR*gtgA*gcaV*atcV*ctgI:2*gggA:1*ggtD+K:1*ttcL:3*atgA:4*ttcI:2*ggcR:2*gtcP*gtcY*gtcH*gaaP*ggtH*cgcH:1+EWGI*cttA:1*tttY*accR*gaaH*cgtH*ccgF*ccgI*accD:2*ctcT*attS:3*gaaS:1*tacT:2*gcgD*ggtD:1*accA:1*ctgP:3*gccS:2*atcV:2*gccD*aggE*gatH*tcgT +NC_000962.3 miniprot mRNA 265573 265896 201 + . ID=MP000088;Rank=1;Identity=0.4425;Positive=0.5841;Target=tr|O06536|O06536_MYCTU 1 113 +NC_000962.3 miniprot CDS 265573 265896 201 + 0 Parent=MP000088;Rank=1;Identity=0.4425;Target=tr|O06536|O06536_MYCTU 1 113 +##PAF tr|O07416|O07416_MYCTU 530 0 530 + NC_000962.3 699930 202475 204065 1587 1590 0 AS:i:2753 ms:i:2753 np:i:530 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:530M cs:Z:*ttgM:529 +NC_000962.3 miniprot mRNA 202476 204068 2753 + . ID=MP000089;Rank=1;Identity=0.9981;Positive=1.0000;Target=tr|O07416|O07416_MYCTU 1 530 +NC_000962.3 miniprot CDS 202476 204068 2753 + 0 Parent=MP000089;Rank=1;Identity=0.9981;Target=tr|O07416|O07416_MYCTU 1 530 +NC_000962.3 miniprot stop_codon 204066 204068 0 + 0 Parent=MP000089;Rank=1 +##PAF tr|O07423|O07423_MYCTU 369 0 369 - NC_000962.3 699930 209705 210812 1107 1107 0 AS:i:1961 ms:i:1961 np:i:369 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:369M cs:Z::369 +NC_000962.3 miniprot mRNA 209703 210812 1961 - . ID=MP000090;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07423|O07423_MYCTU 1 369 +NC_000962.3 miniprot CDS 209703 210812 1961 - 0 Parent=MP000090;Rank=1;Identity=1.0000;Target=tr|O07423|O07423_MYCTU 1 369 +NC_000962.3 miniprot stop_codon 209703 209705 0 - 0 Parent=MP000090;Rank=1 +##PAF tr|O07428|O07428_MYCTU 249 0 249 + NC_000962.3 699930 214968 215715 747 747 0 AS:i:1247 ms:i:1247 np:i:249 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:249M cs:Z::249 +NC_000962.3 miniprot mRNA 214969 215718 1247 + . ID=MP000091;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07428|O07428_MYCTU 1 249 +NC_000962.3 miniprot CDS 214969 215718 1247 + 0 Parent=MP000091;Rank=1;Identity=1.0000;Target=tr|O07428|O07428_MYCTU 1 249 +NC_000962.3 miniprot stop_codon 215716 215718 0 + 0 Parent=MP000091;Rank=1 +##PAF tr|O07437|O07437_MYCTU 615 0 615 - NC_000962.3 699930 224726 226571 1842 1845 0 AS:i:3169 ms:i:3169 np:i:615 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:615M cs:Z:*gtgM:614 +NC_000962.3 miniprot mRNA 224724 226571 3169 - . ID=MP000092;Rank=1;Identity=0.9984;Positive=1.0000;Target=tr|O07437|O07437_MYCTU 1 615 +NC_000962.3 miniprot CDS 224724 226571 3169 - 0 Parent=MP000092;Rank=1;Identity=0.9984;Target=tr|O07437|O07437_MYCTU 1 615 +NC_000962.3 miniprot stop_codon 224724 224726 0 - 0 Parent=MP000092;Rank=1 +##PAF tr|O33266|O33266_MYCTU 503 0 503 + NC_000962.3 699930 400191 401700 1509 1509 0 AS:i:2660 ms:i:2660 np:i:503 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:503M cs:Z::503 +NC_000962.3 miniprot mRNA 400192 401703 2660 + . ID=MP000093;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot CDS 400192 401703 2660 + 0 Parent=MP000093;Rank=1;Identity=1.0000;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 401701 401703 0 + 0 Parent=MP000093;Rank=1 +##PAF tr|O33266|O33266_MYCTU 503 0 503 + NC_000962.3 699930 606550 608059 1506 1509 0 AS:i:2651 ms:i:2651 np:i:502 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:503M cs:Z::495*cacP:7 +NC_000962.3 miniprot mRNA 606551 608062 2651 + . ID=MP000094;Rank=2;Identity=0.9980;Positive=0.9980;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot CDS 606551 608062 2651 + 0 Parent=MP000094;Rank=2;Identity=0.9980;Target=tr|O33266|O33266_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 608060 608062 0 + 0 Parent=MP000094;Rank=2 +##PAF tr|O53482|O53482_MYCTU 357 0 224 + NC_000962.3 699930 227867 228545 195 711 0 AS:i:216 ms:i:207 np:i:115 fs:i:0 st:i:0 da:i:108 do:i:1914 cg:Z:14M1I56M2D20M1I11M5I2M1I23M11D42M3I45M cs:Z:*cggM*ttaA:1*ctgV*gagS:1*cagE*cggQ*gtgA*tccT*ttcR*ggaR:1*gtgP+G*gctT:3*gtgA:1*cgcD*gagR*ataL*agcD:1*tcgI:1*cggG*gccD:2*accF*ctgV*gcgV*gtgL:2*gcgP*ccgS:1*agcC:2*tccT:1*ttgS*gcgL*tcgR*ctgM*gcgV*acgA*cgtG*tgcL*tacE*gacT*gtcL*acaD*cagC:1*gcgR*gtgI:3*ggtE*cagR:2*cgcT:1-ctgacg*ctcV:1*tcgP*ctgK*cggD*tcaR*gccD*atcV*ggcA*ctgM:1*cccF*gaaQ*gatN*gccY*gtcA:1*ttcY*tccP*ggaH+M:1*atcV*ggtA*gcaQ:1*atcM*gccG*tatF*ggcA*cgcL*ccgK+VAKIG*gatK:1+E*acgI*cccR:1*cagR*attV*gccL*acgA:2*cggK*gcgL*gcgL*cacD*atcL*gagQ*gagS*ttcY*gtcL*aacD*actR*ctgK:1*gacK-gggtatcagacggccgtcggtgcgcgcggactg*acgD:8*atcV:1*ctgM*gccG:2*ctaI*ctgV*cacR*cagR:1*cggQ*ttgV*ttgF*atcL:2*gacE:1*accL:1*gccN*gtgL:2*gtcK*atcL*gaaR*tgcG*ggaQ*attT*cagR*gagN+QIA*gtgA:1*cggQ*gagR*gcgQ*atcL*gcgG*gatT*cgcT:1*gcgV*gtcY*attV*ttcT*accH*cgcD*cgcQ*cgaV*tccE*atgA*cttM:1*ttgM*gccG:6*gacS*tccD:1*cgcV:1*ctcQ*gatQ*gtcC*ggcA*accS:1*gacR:1*gtgL*tggY +NC_000962.3 miniprot mRNA 227868 228545 207 + . ID=MP000095;Rank=1;Identity=0.2743;Positive=0.4852;Target=tr|O53482|O53482_MYCTU 1 224 +NC_000962.3 miniprot CDS 227868 228545 207 + 0 Parent=MP000095;Rank=1;Identity=0.2743;Target=tr|O53482|O53482_MYCTU 1 224 +##PAF tr|O53612|O53612_MYCTU 189 0 189 - NC_000962.3 699930 74631 75198 564 567 0 AS:i:935 ms:i:935 np:i:189 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:189M cs:Z:*ttgM:188 +NC_000962.3 miniprot mRNA 74629 75198 935 - . ID=MP000096;Rank=1;Identity=0.9947;Positive=1.0000;Target=tr|O53612|O53612_MYCTU 1 189 +NC_000962.3 miniprot CDS 74629 75198 935 - 0 Parent=MP000096;Rank=1;Identity=0.9947;Target=tr|O53612|O53612_MYCTU 1 189 +NC_000962.3 miniprot stop_codon 74629 74631 0 - 0 Parent=MP000096;Rank=1 +##PAF sp|P71592|WHB5A_MYCTU 139 0 139 - NC_000962.3 699930 27025 27442 417 417 0 AS:i:740 ms:i:740 np:i:139 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:139M cs:Z::139 +NC_000962.3 miniprot mRNA 27023 27442 740 - . ID=MP000097;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P71592|WHB5A_MYCTU 1 139 +NC_000962.3 miniprot CDS 27023 27442 740 - 0 Parent=MP000097;Rank=1;Identity=1.0000;Target=sp|P71592|WHB5A_MYCTU 1 139 +NC_000962.3 miniprot stop_codon 27023 27025 0 - 0 Parent=MP000097;Rank=1 +##PAF sp|P95225|Y268_MYCTU 169 0 169 - NC_000962.3 699930 322766 323273 504 507 0 AS:i:877 ms:i:877 np:i:169 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:169M cs:Z:*gtgM:168 +NC_000962.3 miniprot mRNA 322764 323273 877 - . ID=MP000098;Rank=1;Identity=0.9941;Positive=1.0000;Target=sp|P95225|Y268_MYCTU 1 169 +NC_000962.3 miniprot CDS 322764 323273 877 - 0 Parent=MP000098;Rank=1;Identity=0.9941;Target=sp|P95225|Y268_MYCTU 1 169 +NC_000962.3 miniprot stop_codon 322764 322766 0 - 0 Parent=MP000098;Rank=1 +##PAF tr|P95227|P95227_MYCTU 560 0 560 + NC_000962.3 699930 324566 326246 1680 1680 0 AS:i:2839 ms:i:2839 np:i:560 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:560M cs:Z::560 +NC_000962.3 miniprot mRNA 324567 326249 2839 + . ID=MP000099;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95227|P95227_MYCTU 1 560 +NC_000962.3 miniprot CDS 324567 326249 2839 + 0 Parent=MP000099;Rank=1;Identity=1.0000;Target=tr|P95227|P95227_MYCTU 1 560 +NC_000962.3 miniprot stop_codon 326247 326249 0 + 0 Parent=MP000099;Rank=1 +##PAF sp|P9WG83|Y097_MYCTU 289 0 289 + NC_000962.3 699930 106733 107600 867 867 0 AS:i:1560 ms:i:1560 np:i:289 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:289M cs:Z::289 +NC_000962.3 miniprot mRNA 106734 107603 1560 + . ID=MP000100;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WG83|Y097_MYCTU 1 289 +NC_000962.3 miniprot CDS 106734 107603 1560 + 0 Parent=MP000100;Rank=1;Identity=1.0000;Target=sp|P9WG83|Y097_MYCTU 1 289 +NC_000962.3 miniprot stop_codon 107601 107603 0 + 0 Parent=MP000100;Rank=1 +##PAF sp|P9WGG1|GMHA_MYCTU 196 0 196 + NC_000962.3 699930 137318 137906 585 588 0 AS:i:981 ms:i:981 np:i:196 fs:i:0 st:i:0 da:i:69 do:i:0 cg:Z:196M cs:Z:*gtgM:195 +NC_000962.3 miniprot mRNA 137319 137909 981 + . ID=MP000101;Rank=1;Identity=0.9949;Positive=1.0000;Target=sp|P9WGG1|GMHA_MYCTU 1 196 +NC_000962.3 miniprot CDS 137319 137909 981 + 0 Parent=MP000101;Rank=1;Identity=0.9949;Target=sp|P9WGG1|GMHA_MYCTU 1 196 +NC_000962.3 miniprot stop_codon 137907 137909 0 + 0 Parent=MP000101;Rank=1 +##PAF sp|P9WHK5|PYRH_MYCTU 261 152 261 - NC_000962.3 699930 26287 26566 99 330 0 AS:i:55 ms:i:55 np:i:47 fs:i:0 st:i:0 da:i:39 do:i:372 cg:Z:44M5I7M2I4M2I7M8I13M1D17M cs:Z::1*aagF*tccG:2*acgM*cggG:1*gtcP*tgcY*cagF*atcS*caaT*aacD*cggT:1*cagA:1*gagQ:3*cagE*gtcI:4*ttgV*gtgL*gctM*cagA*ggcK*accA*gagV*gccD:1*gggV*cacF*ggcA*cacE*ggtD:2+VNPEA*tccE*accL:2*ttgA:1*cccS+HR:1*atcV*gtcL:1+RG:1*gtcR*accV:1*cggD*ggaA:1+AFSLCMDN*gatG*atcM:1*gtgI*atcL*gccV*gccF*gggN*ggcL*atcL*gccT:2-cgg*ggcN*cttI:1*gccR:1*ttgV*atgR*ttgG*ggcE*gccK*gccI:1*gtaT:2*ggtT:1 +NC_000962.3 miniprot mRNA 26288 26566 55 - . ID=MP000102;Rank=1;Identity=0.3000;Positive=0.4273;Target=sp|P9WHK5|PYRH_MYCTU 153 261 +NC_000962.3 miniprot CDS 26288 26566 55 - 0 Parent=MP000102;Rank=1;Identity=0.3000;Target=sp|P9WHK5|PYRH_MYCTU 153 261 +##PAF sp|P9WI05|PPE32_MYCTU 410 0 410 - NC_000962.3 699930 466800 468004 531 1266 0 AS:i:651 ms:i:651 np:i:223 fs:i:1 st:i:0 da:i:-1 do:i:126 cg:Z:165M1G14M6I25M1I9M2D25M1I9M6I39M1D16M3I10M1I14M2I37M9D26M cs:Z:*gtcM*atgL:11*gccG:1*atcM:1*tccA:4*aggG:2*atgL*caaA:5*caaD*cggA:2*aacA:2*accY*gcgS*acgA:4*tccG:1*gtgT:1*tccE:3*ggcV*gatA*gacP:1*ctgM:3*gcaS*ctgI*tcgT:4*gccV*gtcA:5*atgI*aggS*gccV:2*gccG*tcgQ:4*gcgG:3*gtgK*gccI:2*aacG*gccV:2*tcgT:1*tacF:6*acgP:2*gcgE:3*cgcA*acaL*atgL*ctgM:3*cagA:2*gttI:9*actA*agtT:1*acgA:2*ggcA:4*catQ:1*atcA*ttgA:2*gacY:4*gccS:1*gggA*gccT:4*cA*gccP*gttF*cacS*ccgE:2*gcgQ:2*agcN*gggP*gccS*gggA*tcgT+AAQSAV*ctgV*agtA*gacQ:2*gcgG*acaA:2*cagS*gcgS*gtaD*gtaI*ccgT:1*gccQ*gcgL*gcgS*accQ*gacL*gtgI:4+S:4*ttcL*ctaA*ccgT*ccgT*cccA-ttcgac*gccT*attA*ccgT*aacS*cccA*atcS*gagA*gatG*cttW:1*gttT*ctcV*gtaL*gccQ*gcaS*gctI*gtaT*gccT*gtcI*gcgL:1*ggcN*agtL*ttgT:1+P*gtaY:1*gcgI*gcgI*cagG:2*gagA:1+PGGWWL*tacT*cgcF*cacG*gacQ*gtgI*gtcL*gacG*gagL:2*aagN:2*catG*tgcV*ccaA:1*gaaL*tccL*gacG*cagP*acaK*cccA:1*gggA*gccG:1*ggtL*gacS*gggP*gatL*ctcA:1*gagL*gtcR:2*cggY*gtcI-acc*agcG*ccgD*ccaI*cagT:1*ccgL*gtcG*gccG*gcgG*ctcA:2*tacG*tccI:1*aacR+AIY*atcV:1*ggaS:4*cacQ*agcG:1+A*aatE*cttA*ccgA:1*gcgV*gtgM:1*caaA:2*gcgS*atgV*ttcL:1+GT:2*actA:1*atgA*tatL*atgA*acgA*gggE*agtA*tcgP*gacG*ggcA*tccL*tacF*gccG*ggcE*ctgM:1*gcgL*gcgS*ggtS:3*accR*ggtA:3*cttT:1*gccV:1*ggtS:1*tccA-gcgccgaccccggctgcagccgccccg*gccG*ggaA:1*ggcR*ggaV:2*ccgG*gctS*gccV:1*aggE*cccD*gccV:1*cagS*cagT:1*cccT*gcgI*gtcI*cccV*gcgI*gcgP:1*gccD +NC_000962.3 miniprot mRNA 466801 468004 651 - . ID=MP000103;Rank=1;Identity=0.4194;Positive=0.5284;Frameshift=1;Target=sp|P9WI05|PPE32_MYCTU 1 410 +NC_000962.3 miniprot CDS 466801 468004 651 - 0 Parent=MP000103;Rank=1;Identity=0.4194;Frameshift=1;Target=sp|P9WI05|PPE32_MYCTU 1 410 +##PAF sp|P9WJM5|MSRA_MYCTU 182 0 182 - NC_000962.3 699930 164714 165260 546 546 0 AS:i:983 ms:i:983 np:i:182 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:182M cs:Z::182 +NC_000962.3 miniprot mRNA 164712 165260 983 - . ID=MP000104;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJM5|MSRA_MYCTU 1 182 +NC_000962.3 miniprot CDS 164712 165260 983 - 0 Parent=MP000104;Rank=1;Identity=1.0000;Target=sp|P9WJM5|MSRA_MYCTU 1 182 +NC_000962.3 miniprot stop_codon 164712 164714 0 - 0 Parent=MP000104;Rank=1 +##PAF sp|P9WJT7|MMPLC_MYCTU 1146 21 997 + NC_000962.3 699930 597258 600012 798 2940 0 AS:i:936 ms:i:936 np:i:468 fs:i:0 st:i:0 da:i:60 do:i:90 cg:Z:55M1I75M1I95M1D140M2I11M2D107M13I8M8I19M2I32M3I23M16I13M1D24M6I38M9I11M1I263M cs:Z::1*tttW*gcgP*gtgL*gtgI*atcV*gtcI*ctgG*ctcC:1*ctgI*ggcA*ttcV*accA:1*tttA*gtcL*aatT:1*gccL*gtaL:1*caaT:1*gaaQ*gtgA*gtcQ*ggaA*aaaA*gcaK*cacR*tcgE*gtaQ*tcgA*atgP*agcL:1*agcP*gacG:1*gcaP:1*attM*cagV*gcgL*atcQ:1*cgcE*gttM*ggtS*cagA*gtgA:1*ggtQ:1+K*tttI*gatE*tccT*gatS*aacA*gcgL*gtaL*acgL*atcV*gtgL:1*gaaT*ggcN*gacE*cagN*ccaG:2*gggP*gacA*gcgD*cacE*cggA*ttcV:1*agcR*gatK:1*atgI*cggE*aagN:1*tccR:3*cgcQ*catD*gtcK*gcgI*cacS*atcV:3*tggL*gggA*gatV:1*ctgE*acaM*gcgK*gcgE*ggaL*tccL*caaA:1*gcgK:1*gatN*cggK:1*gccW*tacN*gtcL*gtgP*gtgI*tacT*ctcF*gtcA:1*aacD*aacA*gaaA*accS+P:1*gcgT*tatQ*gacA*tcgA*gtcF*cacK*gcgR:1*cggA*cacA*atgI:1*gacK*accQ:1*ccgV*ccaA*ccgG*cacT*gggS*gtgL*aagT*gccV*tatH*gtcL*accS:2*gcaI:1*ctcT*aatV:2*cagL*gccT:1*gccL:1*gacE:1*agtD*atcV*gctR*aagI*gtcI*accE*gcgI*atcG:1*agcA*atgV*gtgS*atcV*gcaL*gcaI*atgI:1*ctaI*gtgL*atcV:2*tccN*gtaL*attV:1*gcgM*gttL*ctcV*gtcP:1*atcA*atgT*gtcI:1*atcA*gacS*ctcV*ggcV*gcaT*atcA*cgcQ:1*ttcT*atcL*gccS*ttgG:2*gacE*cacF*aacG*attL-ttc*agcA*cttV*tcaN*acaM*tttQ:1*accI*aacV*ctgF*ctcM*gttS*ctcA*atgV*gcgM:1*gcgG:1*agcG:4*ataV:1*atgL*ctcI*ggcS:3*gaaD*tcgY*cgcV*tacR*gccH:2*gatK*cggS*gaaD*acgM:1*ttcV*tacK*acgK*atgA*tttL*cacM*gggS*accI*gccG*cacK:2*ttgT*ggtA:1*ggtA*ttgA:1*attV:1*ggcV*gccT*atgF*tatL*tgcA*ctcM*agcV:1*gccT*cggK:1*ccgE*tatV:1*gaaS*acgA*ctcV:1*gcgP*cccA:2*atcV*ggcA*atgI*ctgT:1*gcgS*gtcL:1*gcgG:1*ctcV:2*ggcL:2*gtaI:2*gtgL*ggcT*agcG*ttcR*ttcR*aagG*ctgW*ttcI*gatK:1*aagR:1*cggD*atgL*aacT*actS:1*cggM:3*gtgS:1*acgV*gcaR:3*tggR*ccgS*gggT*ccgI*gtgH:1*gcgV*gcgG*acaS+LI*tgcV:3*tccL*attA:1*ttgC*ctgT*gccL:1-cccagt*tacI:1*acaF*acgN:2*ctgD*cgcL:1*ttcT*atgV:1*gccQ*agcH*atgV*ccgE:1*aatV*gtgK:1*gatY*gcgE:1*gctM*ggtN:1*cgcH:1*tcaP*cggM*gctN*cggA*ctgM*aacT:1*gagM:2*ttgF:1*gagK*actS*gacP*cacR:1*atgL:1*aatT:1*gtgG*gacA*atgL*ctgA*gtgD*ttgI*gacE*aagM*gtaM*gccS*aaaR*aatE:1*tacA*cacE*agtL:1*ggtN:1*gaaV*caaM:1*aaaR*gcgG*ataL:3*ttgN:1*acaE*accP*atcL:1*cacE:1*tcgK*ataV*ccgS:1*atcQ*atcA*agcG*atgE*cagV:1*gtgG*aatK*agtL*agcD:1*caaA*atgT*gaaT*ttcL*atgL*aagE*gacE+HGGELDQLTGGAH*cgaQ*attL*gatA:1*ataA:1*gtgA:1+IRNEINGA:2*gcgS*atgS*aatS*accG*tccI*atcV*gagN:1*atgL*catQ*cgcA:1*tatM*gcaD:3+GD*gagK*gtcT:1*gacR*aacQ*accL*gtcE*gacN*atgA*gatS*catQ*ctcY*acgV*catG*gatR:1*tcgR*gacA*ataL*acgG*gctD*acgN:1*agaS*gatG*catT*ctcV*gcgT:1*ttcA:1*gatQ+IAT*ttcW*ttcA*cggS:1*attM*cgcV*agcN*tacA*ttcL*tacN*tggS*gaaS*aaaP*catV:1*ttcN*gacS*gttD:1*ctcA:1*tggR*tcgT+SRAQLAAIVQAQDDGL*ataL:3*ttcR*gatA*atgL*tttA*gacV*agtT*gtgL*gacQ:1-ctg*agcT*gaaQ*aagE*ctcY*gagQ*tacT:1*gtcA*aagR*gatT*atgV*gatS*attT:1*attD*acaG*ctgQ:1*ccgK:1*atgV*cgcV*gcgS*cagT+LKAVDG*atgL:1*ccgT*atgK*ataL*tctA*gcgQ:1*acgQ*acgQ*atgG*cggA*gacN*atgA*atgL*cttA*atcD*tggG*catS*ggcA*acgA:1*ggcA:1*ttcG*tatV*aagQ*caaE*cagL*gagV*aggD*aatQ*aacV:1*gacK*cccM:1*gcgS+GLNEAADFL*atgL:1*cggI*gttK*tttR:2*gccD*cagK*atcP*gatS+M*gatA*tcgG:1*tatN*ctgI:1*cagP*tcgQ*gctI:1*gagS*aatR*ccgD*gatE:2*cggK:1*ctgA*aagQ*atgI:3*ccgA:2*aagH:3*tttY*gtcF*attV*gctQ*ctgS*gagA*ggaL*gatN:3*cccT:1*ggcA*atcM*tctD*cggQ:1*gagN*ccgD:1*aagL:1*gagV:1*agaD*gagS:1*ataR*aagP*ggaN:1*ccaE:1*cagE*ggcD:1*gcgT:1*tatG:1*ggtA:1*accV*gcgP*gcgT*acgA*ttcL*aagR:3*gagD*ggcY*gccY*agaN*tacS:1*ctgM*ctgK*atcF*gccI*ggaV*gtgI:1*gcgT:1*agcV*ttgI*attV*ttgF*atcL:1*atgL*atgV:1*atcL*accL:1*agtA*gtgL:2*gcaP*gtgI*gttY*atcL*gtgI:1*accS:1*gtgL*cttI:1*atgY*ggcL*gccS*tctA*ttcL:1*cttI*tccG*gtaT:2*tggF:1*gacL:3*atcQ:1*ttgM*tacH:1*atgS*gtgL*ttgP*gcgG*atgL:1*gtgF:3*ctgV:1*gtgI:1*tccA:3*ctgM:5*ttgI*aaaR*gagD:1*attS*gggP*gccH:1*ttgI*aacR*accI:1*attV:2*gccT*atgV*gctG*ggtS:4*gtgI:1*gctS:2*atgL*gtgI:2*gttA*accS:1*tcgF*ttgG*tttL:1*ttcG*agcA*gatS*ttgI*cgaN*attT*attM*ggtA:1*atcA:1*accF:3*ctgI:1*ttgI*ctgV*ttcL:2*ctcF*gtcL:2*tcgT*ttcV*atgT*acaV:1*tccA*attL*gctT*gcgT*ctgM*ctgI:2*tggA*ttcN:3*ctaS*cggE*gtgL*cgcG*ccgR*cgcD:1*gccS*agtT +NC_000962.3 miniprot mRNA 597259 600012 936 + . ID=MP000105;Rank=1;Identity=0.2714;Positive=0.4776;Target=sp|P9WJT7|MMPLC_MYCTU 22 997 +NC_000962.3 miniprot CDS 597259 600012 936 + 0 Parent=MP000105;Rank=1;Identity=0.2714;Target=sp|P9WJT7|MMPLC_MYCTU 22 997 +##PAF sp|P9WQM9|ANSP1_MYCTU 489 12 474 - NC_000962.3 699930 415540 416926 1014 1386 0 AS:i:1771 ms:i:1771 np:i:386 fs:i:0 st:i:0 da:i:39 do:i:36 cg:Z:462M cs:Z::1*gacE*acgA:6*catK*agcP:6*gctG*ctcI:17*tcgK:10*atcV:2*atcV:29*tacF:3*gtgA:1*ttcY*gtcA*gccV:6*aacH:4*gggS:8*cacT:1*tgcL*catQ*tacR:1*cggT*gcgI:1*caaT*cccV*atcV:3*acgI:6*ctgT:10*aggE*ctcW:8*tcaA:4*atcL:2*gttM*acgA:2*atcV:10*aagP*atcV:2*cagH*gagS:2*gtcL:3*agcN*agcN:3*atcL*gtgF:2*ggtS*ctgW:2*ataL*gtgL*ctgI:9*gccS:1*atcV:4*atcT:8*gcaE:11*ttgA:3*tgcI:5*actV*gtcA:12*gaaA*catG*gtcE:11*atcF*gacH*gcgG:2*agcD*gtgL:2*ctcI:19*atcV*ctgM*cgaH:1*atgI:1*atcM*aacS:2*ggcA:5*ccaR:3*accS:7*ctgV:3*ggtV:1*ggcT:1*ttgF:1*atcV*attA:3*atcF:2*agcG*caaE:6*cacN*atcM*gccS:1*acgL:1*gtcI:2*gccG:5*gctL:6*cggK*atgL:4*cagI*ctgM:3*aaaR:4*cttF:2*ttcY:6*gctL:2*gccL*ggcV:2*atcV*ctgT:1*tacA*ttcS:1*gaaK*caaP*cacI:1*cccT:1*atgT*atcV:1*gcaT*acgL*gtgI:1*ggtV*gtaI:3*atcT*ggtA:6*aatK:2*acgM:3*cacR*cacE*gccR*atcL*gacG:2 +NC_000962.3 miniprot mRNA 415541 416926 1771 - . ID=MP000106;Rank=1;Identity=0.7316;Positive=0.8355;Target=sp|P9WQM9|ANSP1_MYCTU 13 474 +NC_000962.3 miniprot CDS 415541 416926 1771 - 0 Parent=MP000106;Rank=1;Identity=0.7316;Target=sp|P9WQM9|ANSP1_MYCTU 13 474 +##PAF tr|Q6MX26|Q6MX26_MYCTU 615 0 615 + NC_000962.3 699930 361333 363106 1005 1920 0 AS:i:1497 ms:i:1497 np:i:383 fs:i:0 st:i:0 da:i:90 do:i:0 cg:Z:101M2I23M1D115M3D20M4I7M23I31M1I13M4I18M1D14M1I19M5I26M4I10M5I67M7D15M9D31M2D36M2D20M cs:Z:*gtgM*tccL*tttY:1*atcV:1*caaS:1*gagD*atgL*atcM*gcgT:3*ggtT*gagN:2*agcE:1*agaG:3*aacS*gcgT:2*gcgG:3*gccL*cagP:1*accV*ggaE:1*atgV*tcgA:8*gcgQ*gttI:4*tccG*tcgA:2*cagR*gccS:2*gccT*gccL:1*gcgT:6*gccS*cagR*gtgF:1*cggQ*accA:2*gtgT*gacA:1*ggaA*gcgS:3*gccV:5*gggS:1*aacL*atgQ*ctgV:1+LD*gcgV*gtcI:5*gcgT:11*aacD:1*gcgS*ccgT-ggc*accP:5*gacP:4*ttcY:6*gggA*tccA:1*gcaG:1*ggaN:7*gcgN:2*ttcL*ttcI:4*aacA:2*gacA:2*gccV:2*aacV:2*gccK*ggcR:2*gccG:1*tggL*ttcL:2*ttcN:2*aacA:2*gccQ:2*atcL:1*gttL:6*ctcS:2*gccQ:2*gacH:4*gggI*ttcL:2*aacQ:2*aacA:2*atgP:2*gccT:2*gccM:2*aacA*gccG*gtcT:2-ggcctggcc:2*gtcI*accG*ccgT:2*aacP:1*ggcS*aacD:1*ctcV:1*ctcQ*gtcI:1*gttN*cccG:1+NTDL:1*gccG:1*ggcA:1*gccG:1+GNAGSTTVNGGNGGTGGAARNSS:1*gccG*aacT:1*agtN*gccS*attF:1*cagG:8*ggcA:1*gccG*tccG*acgD*agtG:1*ggcA*atcG:1*atcE:1*caaL:1+E:3*ggcT*ggcA*gctV*ggcS:4*gacK:1+GNAE:1*cccS:2*aacA:5*agcK*gtcG*gagG*cacF*actA*ggcQ:2-ggc*tccT:1*gcgV*agcT:4*gccG*accN:4+H*gggD*gtcS*ggtN:7*aacS:2*cacV*gtcG*agcG*ggcD:1*tcgG+RGGLL*gtcA*aacG*acaN*gccG:1*gccT:2*aaaA:10*ggcA:3*cacA:2+AGGK*agcA*gttD*ctaI*tccA*ggcN*ccgS*gttL:2*agtN+ATVTG:4*gccT:5*gccS*gggA*gttL*agcG*gccT*accG*gatG*atcA*gccG:1*accA:2*cgcL:2*aacH:2*catA:3*tggL:5*gacA:5*gtcL:2*gtcA:4*gcgG:2*gcgG*atcE:2*cacA:2*gatA:2*tccE-gtaaatacccctattggcggc*agcA*gagI*gccP:1*gacG*ggcA*ggtS*aagT*ggcN*ggcS*ctgA:4-ggtgggcgcgggatattcggccagttt:4*gccT:2*gccN:2*gtcD:6*ggcP:1*accL:2*ggcA:2*aacA:2*gccW*attL*ttcI-aatgcc:1*accQ*cccS:1*gccS*gccT:1*acgG:2*gacA:2*gttA:2*accA:1*gcgG:3*aaaA:2*gccS:2*agcA:2*gtcH*aacG*ggcD*gccT:1-ggcgcc*gacS:1*gccK*aagN:1*ctcS*gacS:1*gccT*accA:1*ggcF*aaaD:2*aacP:1*aacQ:2 +NC_000962.3 miniprot mRNA 361334 363109 1497 + . ID=MP000107;Rank=1;Identity=0.5234;Positive=0.5984;Target=tr|Q6MX26|Q6MX26_MYCTU 1 615 +NC_000962.3 miniprot CDS 361334 363109 1497 + 0 Parent=MP000107;Rank=1;Identity=0.5234;Target=tr|Q6MX26|Q6MX26_MYCTU 1 615 +NC_000962.3 miniprot stop_codon 363107 363109 0 + 0 Parent=MP000107;Rank=1 +##PAF sp|Q6MX39|UMAA_MYCTU 286 0 286 + NC_000962.3 699930 559887 560745 858 858 0 AS:i:1492 ms:i:1492 np:i:286 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:286M cs:Z::286 +NC_000962.3 miniprot mRNA 559888 560748 1492 + . ID=MP000108;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|Q6MX39|UMAA_MYCTU 1 286 +NC_000962.3 miniprot CDS 559888 560748 1492 + 0 Parent=MP000108;Rank=1;Identity=1.0000;Target=sp|Q6MX39|UMAA_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 560746 560748 0 + 0 Parent=MP000108;Rank=1 +##PAF tr|Q79FV3|Q79FV3_MYCTU 606 0 606 - NC_000962.3 699930 672925 675916 1068 2094 0 AS:i:1462 ms:i:1514 np:i:399 fs:i:0 st:i:0 da:i:0 do:i:927 cg:Z:32M1I63M2I85M3D22M6I30M1D13M3I5M8D74M1I16M3D1M942V44M3D45M1D10M12D25M1I8M2D18M18D14M9D6M9D11M7D23M8D14M6D14M1D6M1D12M cs:Z::2*ttcY:1*atcL:5*ctgV*accA*acgA:2*acgN*gatN:2*aaaQ:4*atcL*actS:3*accA:2+L:1*gcgP*gtgT*gcgT*aaaG:2*cccA:1*tcaG:5*gtgA:3*gcgS:2*ggcS*acgG:3*gaaA:3*gtcL*agcG*gccT:1*gtgA:1*acgA:2*gacE:2*gtgI:1*accA:2*gcgT:2*agcG*tcgA:1*gtgG*gccS:3*gtcA:1*gttA*gaaS+PL:1*agtQ*ttgA:1*gccN*gcgV*gtcI:5*gcgT:1*ttcL:8*gccT*gacN:1*tccA:11*atcL:11*gcgG*ccaV:2*cgaA:5*gcgS:5*aacI:2*aacT:5*gtgA:1*accA*accV:2*gccV:2*cacN-ggcggcgcg:12*tttL:2*gccT:1*gcgV*gtcA:1*ggcV:1+GGMGAA:5*accN:1*gggY:3*gtcS:5*gccQ:2*aacM:1*atcA:2*gtcA*acgD:1*acgV*tcgN-gcc*agcP:2*ggtT:1*tccT*ggcA*accD:2*gggS*gccT:1+TDQ*gggT*atcL:3-ggcggggccggcggggccggcggg*gtgA*ctgI*atgG:4*aacP:1*gggD:2*ggcD*gagA*ggcM*gggT*cccS:5*gcgS:1*gccG*agcN*ggcA*gccV*cacS*gccT*accV:1*ttgG*ggcD:1*gacV:1*caaG*gccE:2*aacK:2*aatE:1*gggA*gctY:2*accA:2*gtcA:2*cccS*ggcA*ggcA*ggcS*cacI:1*ctgN*ctcA*ggcA*ctcI:2*agcN*cacG:4+N:1*ggcQ*ggtA*agcP:2*gacV:3*cccG:1*gacE:2*aacD-ggcgctacc*gggA*acQ~gt939ag-g*ctcV:1*aacT*cccN*ggcS*ctgP*gatS*ggcN*ggcA*accE*ggcA:4*gccS:2*tccN:1*ggcF*gccD*tggS*gcgF*ggcA*aacS:11*gtcA:2*actR:2*tccL-ggcagcgac*ggtL*gtcI*aacG*ggtD*tccG*agcG:2*gcgG*gacA:1*cacG*cccV:5*gttS:1*ggtA*accP:2*aaaG:2*gacA:7*cccN*aacT*ggcD*gtcS:3*caaS*ggcR*cccK-ggc*ggtA*gccF:5*accV:2-gttggcggtaacggcggccgcggcattgacggcgcc:3*accS:1*ggtL*gccG*cgcT:1*cagG*gatE:2*gccI:2*gccQ:2*aagN:2*cgaA:2+L*accL*ggcI:1*ccgN:4-ccggcg:1*acaV*accG:1*agcT*caaA:4*aacT:5*accA:1-ggggaccccggtgacggcggcaacggcgctaacggcagcgtgttcaccaacaac:1*atcA:2*aacA:2*aacG:1*ggcT:1*gccS:2-agcggggccggcgggagtggcggcgcc:1*tccA*actA:2*gcgG-accggctcaagcagcagcattcatgtc:2*ggcN*aacT:7-gaccatgccctcagcggcaac:2*gccP:1*ggcA*aacL:2*aacK:2*aacS:1*agcG:1*cgcI:1*agcR*ggtA:1*gccS*ggcD:1-cacggcggcaacggcggcaatgcc*agcG*aggV:1*atgA:2*gacA:2*accA:4-ggaaacgccgggcagatt:1*aacT:2*gcgE:2*aatT:4*ggcK:1-ggt*agtT:5-gcc*attM*accG:2*ggcP:1*cgcS*ggcA:1*gacQ*ggcP:1 +NC_000962.3 miniprot mRNA 672926 675916 1514 - . ID=MP000109;Rank=1;Identity=0.5100;Positive=0.5716;Target=tr|Q79FV3|Q79FV3_MYCTU 1 606 +NC_000962.3 miniprot CDS 674847 675916 965 - 0 Parent=MP000109;Rank=1;Identity=0.5649;Target=tr|Q79FV3|Q79FV3_MYCTU 1 354 +NC_000962.3 miniprot CDS 672926 673907 549 - 1 Parent=MP000109;Rank=1;Identity=0.4482;Target=tr|Q79FV3|Q79FV3_MYCTU 355 606 +##PAF tr|Q79FV3|Q79FV3_MYCTU 606 0 586 + NC_000962.3 699930 361333 363106 1017 1881 0 AS:i:1508 ms:i:1502 np:i:387 fs:i:0 st:i:0 da:i:90 do:i:0 cg:Z:97M2I143M3D14M1I20M1D12M1I8M6D19M9D14M6D6M13D26M2D74M14I5M3I17M4I39M1D4M5I11M1I10M3I20M2I11M cs:Z:*gtgM:1*tttY:1*atcL:1*caaT:3*atcV:4*ggtN*gagN:2*agcQ:1*agaG:1*gcgT*atcL*aacS:6*gcgL:1*cagP:4*atgL*tcgA:1*gccG:5*acgA:3*gcgS:3*tcgG:6*gccT*gccL*agcG*gcgT:6*gccE*cagR*gtgF*gtgI*cggQ*accA:1*accS*gtgT*gacA:4*gccG:7*gggS:1+LQ*aacQ*atgA:1*gccN*gcgV*gtcI:3*gccT:1*gcgT:10*gccT:11*gacP:4*ttcY:9*gcaG*cccV:8*gcgS:2*ttcL*ttcI:1*aacI:2*aacT:2*gacA:5*aacV:2*gccV:2*accN*gccG:2*ttcL*ttcY:1*ttcN:2*aacA:2*gccL:2*atcT:4*atcV:3*ctcM:1*ggcA:3*gacA:4*gggY*ttcL:2*aacS:2*aacA:2*atgQ:2*gccM:4*gtgA*aacD*gccG:3-ggcctggcc:2*gtcT*accG*ccgT:1*gccD*aacA:1*ggcS*aacT:1*ctcT*aacD+Q*ctcT*gtcL:1*gttG*cccN*ggcA*accI*gccG:1*ggcN:1*gccG*gatP:1*gccD*aacA:1*agtD:1*attM-ggc*cagT*gcgS:5*gacS:4+V:2*agtV*gggN:1*atcD*gggA*atcV-gcgcaaaccgggggcgcc:2*gctE:2*gccK:2*gacE:2*cccY:2*aacA:2*aatA:1-ggcagcgtcgagcacactggcgctacc:2*tctA:2*ggcI:2*ggtA:1*accI:3-ggcggggtcggtgcgccc:6-ggcggccacgtcagcggcggatcggtcaacacagccggc:1*ggtQ*ggcA*aaaP:2*aacV:2*accA:2*gccE:2*ccgD*ggcA*ggcQ*cacV:1*ggcT*agcN*gttS*ctaP:1*ggcN-ccggtt*ggcA*gacE*agtA:4*gccS:2*gacN:1*gggF*gccD*gggS*gttF*agcA*gccS*accG*gatG*atcT*gccG:1*accA:2*cgcT:2*aacA:2*catR:3*tggL:2*aacD:2*gacA:8*gtcT:2*gccS:2*gctP:1*gcgG*atcG:2*cacA:5*tccA*gtaA:2*cctD+SAGSSRKAFGGDGG*attV:2*agcD*gagG+ASA*gccL:1*gacT:2*aagE:2*ctgI:2*gacQ:2*gggN*cgcG:1+AGGL*ataL*ttcI:1*cagN*tttG:4*gccV:2*gccT*ggaA:1*gtcA:2*gccT:2*gctS:2*accA:2*ggcA:2*aacA:2*gccG*attG*ttcT:1*gccS:1-acc:4+FGGNG*ggcN:3*gacN:2*gttN:2*accA+P:2*gccL:5*gccS:1+GLI:1*agcR*ggcA:1*gtcS*aacD:1*gccG*accV:2*gacG:2*aagG:1*ctcA*gacG:2+GG:3*aaaE:1*aacG*aacT:1*aacG*cccD:1 +NC_000962.3 miniprot mRNA 361334 363106 1502 + . ID=MP000110;Rank=2;Identity=0.5407;Positive=0.6172;Target=tr|Q79FV3|Q79FV3_MYCTU 1 586 +NC_000962.3 miniprot CDS 361334 363106 1502 + 0 Parent=MP000110;Rank=2;Identity=0.5407;Target=tr|Q79FV3|Q79FV3_MYCTU 1 586 +##PAF sp|I6XD69|PKS12_MYCTU 4151 1981 2934 + NC_000962.3 699930 485808 488688 1509 2922 0 AS:i:2338 ms:i:2338 np:i:639 fs:i:0 st:i:0 da:i:78 do:i:-1 cg:Z:74M5D38M1I8M11I81M4D194M1I30M1D12M1I25M1D22M6D13M1D44M1D366M2D32M cs:Z::1*aatE*gagA*gtcI*agcD*ctaP:1*gttK*ccgA*attF*agaQ:3*ttgF*aaaD:1*attL*gatT*gtcA*ttaV*gcgE*attM*cccR*ggcN*gacR:1*ggtK*gacS*agaA*tttT:1*tttL*tgtS*attL*cccS*gatP*ttgT*gccL*gttI*tggF:1*aatY:1*agcT*gctP:1*gatR:1*attA*gatS*agtY*ctgI*ttgR*aacT*cagE*cgtL*agtA*gctG*gacL*tcgP*ttaQ*agaE*gagI*agtK:1*ggaT*cacP:1*gacV:1*aacT:1*cagS-ggtcggggcagcata*aacE*gagD:1*gttI:1*gtcI*atcV:1*gtgM*ggcA:2*tttY:2*gatG*attV*gacN*ggcS:1*gaaD*cggD*ctaM:2*tttM:1*accI*gagQ*aagG*aagR*tgtD*gcgV*ataL*acaS*gcgE*tatF:1+A:3*ttcW*acgD*aatL:2+LYNPDPDAAGA*actC*ttcY*gcgT*gagR*tccT:3*ttaV*aagD*gatG:1*gcgG*ggtD:2*aatP*agaA:2*gatG*atcV*ccgG:1*gacS:3*cgaA:4*caaH:1*ttgM:3*gtcL:6*catR:3*attD:1*gagT*tcaG:2*cttG:1*cgtA:4*gttA:2*tcgM*tcaT*actQ*gacG:1*gtcG*cggM*cttF*gtgA*tcaA*gctE*agcP*gctV*cagE*caaG-aagtctactatt*tggF*gatR*aacL:2*ggtQ*tctL:2*attV*attA*gccS*aatG:1*atcV*tcaA:1*tttV:1*gatG*attL*cagE:2*tccA*attV*gtcS*attV:10*gtgL:1*ctaM:1*tgtV*cgaG:2*agtR*accS*tggG*gacE:2*atcL:2*gtcA:2*acgV*aatT:1*cttN*attA*tcaT:1*gaaD*ccaI*tggF*ggtV*gggE:1*aggS*gaaR*gcgW*ggcR*atcG:2*cagP*acaD:1*tgcR:1*cacK:2*gatA*aaaA*tccA:3*atgT*gtaG*cgcF*ggtS:2*tgcG:1*gttM*atcL:9*cttR*gagL:1*cggH*cggP*ataV:2*attV*ctgV*acgV:8*aagA:3*attL*atgT:3*cctG*agtP*gcgS:1*attQ*ggtR:1*cttV*gaaR*aatA:1*tgcL*aagA*agcN:1*cgcG*gtcL*gatS*ccgA*ctgA:1*atcV*ggcD*tacV:2*gccG:5*tcgT:3*aggP:3*cacQ:2*ggcL*atgA*gtcT*tttY:1*cgcQ*aagD:1*ccgG*ggaE*tctP:1+E:2*atgW*atcL:2*atcV:1*ccgS:1*atcM:2*ctgT*gaaQ*ggtA:3*atcV:2*ttgV:2*gcgM:2*atgA*gttM-gag:1*ggcH*tcgE:3*agcA*gggT*gggL*tttH*acgV*gagD+V:1*aatS:1*gctH*atcV*ccaD*ttcW*acgS*gaaA*ttgG*ggcA*ctgV*agaE*gttL*gtaL*gacT*gaaA*cttP*cagR*gagV:2*gtgA*gtgG:1-ggt:1*ccgT:9*tttI*ggcS:7*gtcI:1-gaagctggttcggttggg:1*gacV*acgP:1*tcgV*ggcP:1*gcgR*gatE*gttA:1*ggtW*tccA-ggt:1*gggP:2*gcgP:2*attV:1*gggA:1*acgS*gctE:3*gctR*gctG:2*ggtA:2*gggA*cggA:3*gctG*cggD*ccgD*gcgG:3*gttA:3*tatW:2*gtgA*agcG-acg:4*gatE:7*cagG*actD:2*gagR:5*gctD*gggE*gtgL*gttA*gctG*ggtD*cggQ*ccgL*gagG*gctG*gggS:2*tgcR:1*gttT*ggcA*aagT*ccgA:4*gctV:3*gccP:10*agcM*gagG:1*tatH:1*gccG:7*ctcF*gatN*gctT:2*gacG:6*cggL*tatR:3*gatE:1*atcM:4*caaE*gatN:3*accS:15*tatF:3*atgG:6*ggtD*ttgF:1*ctgM:3*gtgI:3*gccS:6*gcgV:1*tgtS:1*ccgE*gatN:2*atgV:18*tttV:4*cgtA:1*gacE:2*gcgR:1*atgL:1*gggS*cacA*gatE:1*agcD:9*gtgL:5*cacQ*gatN:2*agcA:1*atcV:2*cggQ:2*ggcA*cagD:5*cggQ:9*gcgP:2*gagD:3*gctD:2*acaA:4*gaaG*ctgI*tctA*gtgI:1*ttgR:3*ccgG:9*gtgA*gccG:3*gccG:2*gatA:2*gccR:4*gcgQ*gtgA:3*ggcA:4*agtF:1*cacQ*tgcA:2*gccG:3*atcL:4*ggtS:3*acgV*tcgA*ttgS:2*gcaE:2*gccP:1*gcgV*cagA*atcV*gtgT*tcgT*gtgM*cccS*acgA:8*gtcA*agtT*gtgL*atgT*acgN:1*gcgV:5*tcgT:2*ggcD:3*gccR*tcgA:1*tttV*tccG-gggtac*cggE*cccA*aagQ*cggF:9*catR*caaR*aagR:3*gcaS*ccaG*gccD*ccaG*tcgV*gtcA*agcA:1*cccA*accA*gccG*gccL:1 +NC_000962.3 miniprot mRNA 485809 488688 2338 + . ID=MP000111;Rank=1;Identity=0.5164;Positive=0.6561;Target=sp|I6XD69|PKS12_MYCTU 1982 2934 +NC_000962.3 miniprot CDS 485809 488688 2338 + 0 Parent=MP000111;Rank=1;Identity=0.5164;Target=sp|I6XD69|PKS12_MYCTU 1982 2934 +##PAF tr|O06311|O06311_MYCTU 275 0 275 + NC_000962.3 699930 438821 439646 825 825 0 AS:i:1408 ms:i:1408 np:i:275 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:275M cs:Z::275 +NC_000962.3 miniprot mRNA 438822 439649 1408 + . ID=MP000112;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06311|O06311_MYCTU 1 275 +NC_000962.3 miniprot CDS 438822 439649 1408 + 0 Parent=MP000112;Rank=1;Identity=1.0000;Target=tr|O06311|O06311_MYCTU 1 275 +NC_000962.3 miniprot stop_codon 439647 439649 0 + 0 Parent=MP000112;Rank=1 +##PAF tr|O07175|O07175_MYCTU 355 0 355 + NC_000962.3 699930 151147 152212 1065 1065 0 AS:i:1803 ms:i:1803 np:i:355 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:355M cs:Z::355 +NC_000962.3 miniprot mRNA 151148 152215 1803 + . ID=MP000113;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07175|O07175_MYCTU 1 355 +NC_000962.3 miniprot CDS 151148 152215 1803 + 0 Parent=MP000113;Rank=1;Identity=1.0000;Target=tr|O07175|O07175_MYCTU 1 355 +NC_000962.3 miniprot stop_codon 152213 152215 0 + 0 Parent=MP000113;Rank=1 +##PAF tr|O33203|O33203_MYCTU 556 0 428 - NC_000962.3 699930 415678 416962 516 1296 0 AS:i:758 ms:i:758 np:i:250 fs:i:0 st:i:0 da:i:3 do:i:174 cg:Z:127M2D62M2I11M1D163M2I26M1D35M cs:Z:*ccaM:1*ctaD:2*accA*gacA*gagA*cggD*ctcP:1*cgcD*gaaT*gacQ*acgP*ggcH*tatL*cacR*aaaR*ggcD:1*catA*agcN:1*caaH*ctgI:1*atgL:2*ctcI:9*ctcM:1*gccS:1*ggcR*cgcT*cttI*gcaS*tcgL:3*ggtA*ttgV*ttcM*ctgV:4*tgcI:1*atcF:3*ctgF*atcV:3*ctcM:3*gtgL:1*cacS*cgtN*ccgL*tccN*tcgY*gggK:3*tccD*tacF:1*cgcA*gagD*ttcL*tacR:1*gaaP*aagA*gtgA*gccG:1*gtcF*gccV:2*atgS:1*ttcW*ctgF*aacA:1*gcgV*atgV:3*gtcA:1*accL*accV:2*gcgT*cacG:1*tgcA*catR*tacF:1-cgggcg*tttW*caaP*cccG*atcL:1*cagI:1*acgV*ctgP:2*atcV*gcgT*ctgV*ctgA*gtcL*gtgI:1*tcgA*atgV:2*atcF:3*ctcH:7*gccF*tcaA:4*atcA:1*ctgI:1*acgC*tttL*ctgI*atcA:2*acgA*gtcI*tttL*ctcV:1*gggT*cgcN*tacF*aagV*atcS*gacP*ggcH+GV*cagH*gagA:1*gggI*gtcE*tccN:2*agcN*agcD*catN-gga:1*atcF*gtgF:3*ctgF:1*cccG*ataV:1*ctgS*gtcG*accF*tcgQ*gggI*gtgA*gtaF:3*gccI*gcaG*atcV:4*atcT:2*gggA:3*gaaD:1*gcaR*aagR*atcT*atgL:5*tctA:1*gtgP:2*atcV:1*tgcV:2*gtcI:1*tcgA*actL*gtcL*ctgA*ctgI*gccL*ctgA*ctgV*ctgV:1*tatW*accR*gccQ*tacF*aaaA*gaaS*catG*gtcE:5*ttcM:2*aagL*atcA:1*atcL*gacA:2*ggcA:2*atgV:1*ctcF:2*ctcV:3*ctgA:2*ctcA:1*gccS:1*ctgF*tatF:4*atcM:1*cgaF*tcaG*atgL:1*atcD*aacE:1*agcH*ggcA:1*aggA*ttcA*accF*gcaH*ccaQ*atgL*tcgN*aagR*accG:3*tacA*ggcP*gggA*atcL:4*ggtP*atcL*ggcL:1*ttgT*ggcS:1*attP:1*aacL*gccY*atcA*aaaG*ccgR:1+VI*caaG:2*gagT*atcL:1*ctcT*cacT*atcV*gccS*gcgS*acgL*ggaL*gtcF*atcM*gcgF*gccV:2*acgM:1*gtgI*gctI*tgcS*cagY:1-cgg*ctcV*cacY:1*atgR*gcgR*aacH*gccP*gggQ*cagR*ctgH*cagT*cggD*ccgS*aaaV*ttcY*cggK:2*cttG*tcaG*ccgV*ttcV*agcM*ggcC*tatW*ctgA*acgV:1*gctV:1*ctgF:1*ggcF:1*ctgI +NC_000962.3 miniprot mRNA 415679 416962 758 - . ID=MP000114;Rank=1;Identity=0.3981;Positive=0.5787;Target=tr|O33203|O33203_MYCTU 1 428 +NC_000962.3 miniprot CDS 415679 416962 758 - 0 Parent=MP000114;Rank=1;Identity=0.3981;Target=tr|O33203|O33203_MYCTU 1 428 +##PAF sp|O53672|Y250_MYCTU 97 0 97 - NC_000962.3 699930 301737 302028 288 291 0 AS:i:497 ms:i:497 np:i:97 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:97M cs:Z:*ttgM:96 +NC_000962.3 miniprot mRNA 301735 302028 497 - . ID=MP000115;Rank=1;Identity=0.9897;Positive=1.0000;Target=sp|O53672|Y250_MYCTU 1 97 +NC_000962.3 miniprot CDS 301735 302028 497 - 0 Parent=MP000115;Rank=1;Identity=0.9897;Target=sp|O53672|Y250_MYCTU 1 97 +NC_000962.3 miniprot stop_codon 301735 301737 0 - 0 Parent=MP000115;Rank=1 +##PAF tr|O53675|O53675_MYCTU 118 0 118 + NC_000962.3 699930 305452 305806 351 354 0 AS:i:603 ms:i:603 np:i:118 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:118M cs:Z:*gtgM:117 +NC_000962.3 miniprot mRNA 305453 305809 603 + . ID=MP000116;Rank=1;Identity=0.9915;Positive=1.0000;Target=tr|O53675|O53675_MYCTU 1 118 +NC_000962.3 miniprot CDS 305453 305809 603 + 0 Parent=MP000116;Rank=1;Identity=0.9915;Target=tr|O53675|O53675_MYCTU 1 118 +NC_000962.3 miniprot stop_codon 305807 305809 0 + 0 Parent=MP000116;Rank=1 +##PAF sp|O53945|MYCP5_MYCTU 585 14 585 + NC_000962.3 699930 354503 355877 687 1740 0 AS:i:916 ms:i:857 np:i:292 fs:i:0 st:i:0 da:i:6 do:i:3 cg:Z:18M2I94M1I13M40I2M25I1M14I1M5I4M6I1M7I4M14I22M3I76M4D2M1D49M1I28M1D82M3D5M4I47M cs:Z::2*gcaG*tttT:1*tgtT*ctgI:2*accV*gtgL*gtcL*gttA*gcgS:1*tggA*tggL:1+GL:3*tggY:2*gggS:2*gtgT*gtgI:1*gccP*gccG:1*caaL:2*agcD:1*gacP:3*gtgL:3*gaaK:1*cgcN*ggtA*gcgY:1*agcT*gtcE*tccV:2*atcL:4*ccaF*ggcQ*gtaL*ccgQ*acgP*cccK*agcY*caaM*acgE:4*cctN*gcgE:4*tccG:2*gagD:1*cagV*ctgK:2*atcV:5*cagT:1*ggcH:4*aacR*gtcL*gatI*gccP:3*ttcY:1+M*gagA*tcgG*accG:3*accS:3*gggA:2+TLVASMIAAVPANGAVPLPSVPRRPVTIPTTETPPPPQTV:2+SPVPPQTVTVIPAPPPEEGVPPGAP:1+PGPEPPPAPGPQPP:1+VDRGG:1*atcT:1*gccT+VPSYSG:1+RKIAPID*cagN:1*ggtR:1+PHPSAPSPALGPPP:1*ggcA:3*gtgI:2*gcgG*gcgV*cggE*ctgI*ctgI:3*gcgQ*atgS:1*acgQ*aagA:1+GLK*tcaD:1*cgcY:1*tcgG*gggD*ggcE:3*ctgT:2*gccK*acaI*cttD*gacN:1*gcgE*gtgT*ctgM:1*ggtR:6*gacN*cttM:2*aagS:3*gtcI:1*acgD*atcV*accM:1*ctaM*cccS:1*gatR*cggN*atgV*gtcI:2*gccR:5*atcV*cggH:15*aacD-accggagcgagc:2-gtc*agcK*gcgK*tcgD:1*gatK*tccQ:2*ttgI*accF:1*ctgP*agcL*cgcQ:5*aacA:1*gcgN*ggcA:2*tcgT:1*tccV*atcT:3*tggF*cagH*cccD:3*tcgT:1*gcgG*tcgA*ctcV*acaD*tccA*gccN:3+L:2*ttcM:1*atgI*cccA:4*ggcS:1*gccS:3*gaaT*aacD*attV*gcgV*tcgG*gtgL:1*aacP*tcaR*ggcD:2-gcc:1*gctI:1*ggaA*ctgI*cccD*gacG*gccP*cacD*cagN*aaaS:1*gtgL*gctV*ctcP*agcA:3*tacF*gcgS:1*ggcA*tatI:9*agcA*cgcK*tatF:1*gggE:1*aacS:1*accY*gagQ*gtgI*gtgI*cgcN:2*accI*gccH:2*cacR*cgcP*ggcP:2*gagG*tccV*tccD:1*atcQ:2*gccY:1*aacV*ctgV:1*gcgP:6*caaD*ctgV:1*gccK*gaaG:1-gggggcggt:1*gcaE:1*gccP:1+QLSA:1*gtcL*gccV*gatV:1*ccgQ*gtcP:3*aaaR:1*accM*acaV:1*cgcI*aacW:2*ttcA*gccG:1*gcaL:1*gcgG*ctgA*agcL*gtgL*ctgI*gtcG:1*ctcA*acaV*gccF*gcgG:1*gtcA*gcgT*ataL*gcgM:2*cgaS:1*gagK*cccQ*accQ +NC_000962.3 miniprot mRNA 354504 355877 857 + . ID=MP000117;Rank=1;Identity=0.3948;Positive=0.5034;Target=sp|O53945|MYCP5_MYCTU 15 585 +NC_000962.3 miniprot CDS 354504 355877 857 + 0 Parent=MP000117;Rank=1;Identity=0.3948;Target=sp|O53945|MYCP5_MYCTU 15 585 +##PAF sp|O69729|TCRY_MYCTU 475 132 475 - NC_000962.3 699930 697960 698934 333 1046 0 AS:i:282 ms:i:270 np:i:158 fs:i:1 st:i:0 da:i:60 do:i:54 cg:Z:74M4I4M2I21M4I4M3I18M2I6M1D5M2F31M2D8M1I20M4I7M1D39M2I34M2I26M1D22M cs:Z::1*gaaD*gccV*gacI*cccV*gatT:1*gcgL*ctgS*cgcM:1*ctcN*accV:1*gacA*atcT*accM*gccL*gatQ*ctgM*gtcL*cggI*gaaI*ttgF*gtgG*accI*atcV*ctgT*ccgV:1*gtgA:2*atcA:1*gcgT*gtgT:1*gccG*tacI*ctgV*ctcI*agcI*cgcK*gccR:2*cggA:1*gtcL*gacR:1*atcV*cgcA*gcgQ*gcgT:1*caaS*acaE*ctgV*accV*accD*acgL:1*cacL*cccD*gacR*accG*gacE*gcgV*ccgK:3+RVPE:1*cccD*accA*gacN+PS*gacT:1*atcV*gctG*tggQ:1*gcaG*acgS*actA:2*accR:2*accD*cgaH*ctgI*caaA*cggA:2+SARQ:1*cacS:1*caaT+CVR:15*ctgA*ctgI*accR+GY:3*gaaT*ctgQ:1-tgc*gccI:1*ccaD:2-cc*gacE*cagA*ctgV*agcA*gccH:1*ctgM*cgcS*tccR*gcgV*ctcA*gaaS:2*cgcE:1*ctcI*agcT*ggaR:1*gccV*gacE*caaD:2*accL:3*gccL:1-cgcccc*gaaS*tccG*cacR:1*tccL*gccE*aaaR*gcgG+P:1*ccgD*atcM*actS*cccR:1*ctgA*cacV*gagD*agcA:1*gccS*cgcD*ttcA*gccH*gctV*actA:1*gcgP:1+HQWA*atcL*accD*acaL*cgcP*gcgP:2-gac*ctgV*ttcV*gtcI*tcgP*atcG:1*ccgA*gacA*cacR:1*cgcH*cgaQ*atcV*ctcV:1*gccN*gtgL:1*gacA:2*atcR*accV:1*gggT*gacG*ggtP*gaaG*atcT*gctI:2*gcgT*cacR*gccL*cgcS*gacT:1*gcaP+TH:1*gacV*atcL*ggcQ:1*cgcI:1*cacN:3*ttcI*gccP*gacA*cacA*tttL*cttQ*cccS*gtcE*gccV:1*gacE:2*accA:1*gccG:2*gccS:1*ggcS*ggtR*cgcQ+AG*ggcS*agcT:7*gccS:1*ctcV*accV*accK*accA:1*ggcN:1*catT*gccI*aacT*gccV*accS*aacS*cacS:1-gac:1*gggY*gccT:1*ctcF*cgcA*atcV*accR:2*acaL*ccgD*cggG*ccgW*cccQ*ttcP*cacL:1*gagS*cttS:2 +NC_000962.3 miniprot mRNA 697961 698934 270 - . ID=MP000118;Rank=1;Identity=0.3184;Positive=0.4532;Frameshift=1;Target=sp|O69729|TCRY_MYCTU 133 475 +NC_000962.3 miniprot CDS 697961 698934 270 - 0 Parent=MP000118;Rank=1;Identity=0.3184;Frameshift=1;Target=sp|O69729|TCRY_MYCTU 133 475 +##PAF sp|P0DMM4|Y572A_MYCTU 55 0 55 - NC_000962.3 699930 665436 665601 165 165 0 AS:i:312 ms:i:312 np:i:55 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:55M cs:Z::55 +NC_000962.3 miniprot mRNA 665434 665601 312 - . ID=MP000119;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P0DMM4|Y572A_MYCTU 1 55 +NC_000962.3 miniprot CDS 665434 665601 312 - 0 Parent=MP000119;Rank=1;Identity=1.0000;Target=sp|P0DMM4|Y572A_MYCTU 1 55 +NC_000962.3 miniprot stop_codon 665434 665436 0 - 0 Parent=MP000119;Rank=1 +##PAF tr|P95215|P95215_MYCTU 151 0 151 - NC_000962.3 699930 310296 310749 453 453 0 AS:i:758 ms:i:758 np:i:151 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:151M cs:Z::151 +NC_000962.3 miniprot mRNA 310294 310749 758 - . ID=MP000120;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95215|P95215_MYCTU 1 151 +NC_000962.3 miniprot CDS 310294 310749 758 - 0 Parent=MP000120;Rank=1;Identity=1.0000;Target=tr|P95215|P95215_MYCTU 1 151 +NC_000962.3 miniprot stop_codon 310294 310296 0 - 0 Parent=MP000120;Rank=1 +##PAF tr|P96845|P96845_MYCTU 319 197 319 - NC_000962.3 699930 478589 478970 108 381 0 AS:i:128 ms:i:128 np:i:63 fs:i:0 st:i:0 da:i:0 do:i:21 cg:Z:53M5D69M cs:Z:*atgV:2*gccG*aggQ*tcgA*gccL*tggL*cagE*tgcA:1*ctcV*gacN:2*agaK:7*ccgA:1*gccG*ggcS*ttcY:1*ctgA*accI*cagK*gccH:2*gtcA:1*atgV*gccH*gtgI*gaaA*ctgI*cacE*aagL*ggtA*cagC*ctgP:1*tcgV*ttgY*catG*ctgA*gggA-cgcctcaaagacagg:1*ggcS:1*cgcE:1*gatR*cagD:2*ttcA*ggcA:1*ctcA*aacA*aacA*accS*cggE*gaaA:2*aaaL*atcA*tgcA:1*accW:1*cgaL*acaQ*ataT*ctgH:1*ggcA*aacI:1*ataF*tcgT*ctgC:1*tacH*ccgD*gtcL*atcS*cggL*cacW*atgL*gtcL*aacR*ctgV*gagQ*tcgA*gtgL*ctcH*accS*tacA*gagW:3*gagQ*atgE:1*cagR*ctgR*gtgR*ctcV*ggtL*cagE:1*ttcL +NC_000962.3 miniprot mRNA 478590 478970 128 - . ID=MP000121;Rank=1;Identity=0.2835;Positive=0.4961;Target=tr|P96845|P96845_MYCTU 198 319 +NC_000962.3 miniprot CDS 478590 478970 128 - 0 Parent=MP000121;Rank=1;Identity=0.2835;Target=tr|P96845|P96845_MYCTU 198 319 +##PAF sp|P9WG17|Y072_MYCTU 349 0 349 + NC_000962.3 699930 80623 81670 1047 1047 0 AS:i:1717 ms:i:1717 np:i:349 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:349M cs:Z::349 +NC_000962.3 miniprot mRNA 80624 81673 1717 + . ID=MP000122;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WG17|Y072_MYCTU 1 349 +NC_000962.3 miniprot CDS 80624 81673 1717 + 0 Parent=MP000122;Rank=1;Identity=1.0000;Target=sp|P9WG17|Y072_MYCTU 1 349 +NC_000962.3 miniprot stop_codon 81671 81673 0 + 0 Parent=MP000122;Rank=1 +##PAF sp|P9WHK9|PYRE_MYCTU 179 0 179 - NC_000962.3 699930 457843 458380 534 537 0 AS:i:882 ms:i:882 np:i:179 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:179M cs:Z:*gtgM:178 +NC_000962.3 miniprot mRNA 457841 458380 882 - . ID=MP000123;Rank=1;Identity=0.9944;Positive=1.0000;Target=sp|P9WHK9|PYRE_MYCTU 1 179 +NC_000962.3 miniprot CDS 457841 458380 882 - 0 Parent=MP000123;Rank=1;Identity=0.9944;Target=sp|P9WHK9|PYRE_MYCTU 1 179 +NC_000962.3 miniprot stop_codon 457841 457843 0 - 0 Parent=MP000123;Rank=1 +##PAF sp|P9WHW5|PSTP_MYCTU 514 0 514 - NC_000962.3 699930 21639 23181 1539 1542 0 AS:i:2619 ms:i:2619 np:i:514 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:514M cs:Z:*gtgM:513 +NC_000962.3 miniprot mRNA 21637 23181 2619 - . ID=MP000124;Rank=1;Identity=0.9981;Positive=1.0000;Target=sp|P9WHW5|PSTP_MYCTU 1 514 +NC_000962.3 miniprot CDS 21637 23181 2619 - 0 Parent=MP000124;Rank=1;Identity=0.9981;Target=sp|P9WHW5|PSTP_MYCTU 1 514 +NC_000962.3 miniprot stop_codon 21637 21639 0 - 0 Parent=MP000124;Rank=1 +##PAF sp|P9WHX5|PPE63_MYCTU 479 0 343 - NC_000962.3 699930 374672 375714 435 1074 0 AS:i:487 ms:i:487 np:i:182 fs:i:1 st:i:0 da:i:-1 do:i:198 cg:Z:175M3D5M8D14M1G19M7I17M4D61M3I41M cs:Z:*cggM*atgA:2*gtgL*gtgT*tcgL*gcgS:5*ttaA:3*ctcA:1*gccG:1*tcgP:1*ccgS*atgL*ttgS:7*ggaE:2*gacA:2*gcgW*gtgL:2*tcgA*tggS:1*gggE:2*accC:5*gcgR*gcgW:1*cgcQ:2*gcgS*gcgS*gttR*gcgM:2*cgcA*gcgQ*gtaA:1*cccR*tacH*ctgT:3*attA*tcgA:1*acgA*gccT:3*cagG:2*gctS:2*cggQ*gtaT*gccM*gtgA*gccL*acgA*ttcY:3*cggF:7*atcL:6*gtgL*ctgV*gtgA*tcgW:1*gtgA*agcG:2*ctgV*ctgF:1*ttcQ:1*gctT:5*accA:2*gccI:2*cggQ:6*gccV:2*gttL*ggcN:3*ggaV:3*gccV*gtcG*tccA*gcgR:1*atgR:1*ttcW*accQ:1*cagL:1*aagH*aagE-ctggcgggc:1*tcgP*gagR:2-accagcgccgcggcagccgctgcc:1*cccG*ccgE*agcH*gcgS*gcgD*ggcS*ttcT:1*ctcT*ggcE:3*gP:1*gcgS*ccaT:2*tggR*gcaI:1*gaaV*acgP*tcgG:1*tgtS*tcaP*acgV*tcgH:1*tcgA*gcaT+LLPFIGR*attL*tggL:2*acaR*accY*tcgA*gctE:1*caaN:1*tggA*gcaI*gcgG:1*accN:1-gtttggccaacc*tggF*gcgP*gccG:2*tcgP*gctE*ttgV*cgaV*acaS*ccgY*gcaP:2*atgI*tcgG*gctV:1*ggaS*ataG*cggS*gcaL*gcaG*acaA*atgV*tcgD:1*tcgN*ggcQ:1*ccgI:1*acgI*gacG*agaQ*tcgQ*ggtM*tcgL*gcaH*gctN*tcaE*actI*cggL:3*acaA:1*gccG*tgtQ*tcaP*actV*ccgT*gcaV:1*gaaG*acgL:1*ggtM*tgtG:1+MVI*actD:1*gcaE*ccgL:1*attY*tcgL:1*tcgI*gaaD*acaP*gcgN:2*gaaP*actS:2*tcgL*gcaT*acaF*cggV*gcaE*gcaL*ccaA*acaG:1*gctE*ggtR*tcaG*acaL*ccgA*gcgQ:1*tcaY*acaL:1*gcgV*gctG*tcaT:1 +NC_000962.3 miniprot mRNA 374673 375714 487 - . ID=MP000125;Rank=1;Identity=0.4050;Positive=0.5084;Frameshift=1;Target=sp|P9WHX5|PPE63_MYCTU 1 343 +NC_000962.3 miniprot CDS 374673 375714 487 - 0 Parent=MP000125;Rank=1;Identity=0.4050;Frameshift=1;Target=sp|P9WHX5|PPE63_MYCTU 1 343 +##PAF sp|P9WJP3|MENC_MYCTU 326 0 326 + NC_000962.3 699930 644489 645467 975 978 0 AS:i:1633 ms:i:1633 np:i:326 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:326M cs:Z:*gtgM:325 +NC_000962.3 miniprot mRNA 644490 645470 1633 + . ID=MP000126;Rank=1;Identity=0.9969;Positive=1.0000;Target=sp|P9WJP3|MENC_MYCTU 1 326 +NC_000962.3 miniprot CDS 644490 645470 1633 + 0 Parent=MP000126;Rank=1;Identity=0.9969;Target=sp|P9WJP3|MENC_MYCTU 1 326 +NC_000962.3 miniprot stop_codon 645468 645470 0 + 0 Parent=MP000126;Rank=1 +##PAF sp|P9WJT9|MMPLB_MYCTU 966 0 966 - NC_000962.3 699930 238394 241292 2898 2898 0 AS:i:4902 ms:i:4902 np:i:966 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:966M cs:Z::966 +NC_000962.3 miniprot mRNA 238392 241292 4902 - . ID=MP000127;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJT9|MMPLB_MYCTU 1 966 +NC_000962.3 miniprot CDS 238392 241292 4902 - 0 Parent=MP000127;Rank=1;Identity=1.0000;Target=sp|P9WJT9|MMPLB_MYCTU 1 966 +NC_000962.3 miniprot stop_codon 238392 238394 0 - 0 Parent=MP000127;Rank=1 +##PAF sp|P9WQ41|MBTM_MYCTU 521 30 512 + NC_000962.3 699930 484078 485680 453 1632 0 AS:i:416 ms:i:416 np:i:227 fs:i:0 st:i:0 da:i:36 do:i:51 cg:Z:21M4D71M4D61M5D33M1D41M1D7M1D81M18D3M4I35M19D4M2I46M3I14M1I9M3D4M6D42M cs:Z::1*atgH*acgP:1*agtP*caaE*ttaV*tatH*tctG*cgcL*gtcA*accE*gccS:1*tctA:1*tatW:1*ataL*agtD*tatH-ggccggcatgct:2*cgaP*aggA*accA*gcaV*gcgG*ataL*tcaV*gctG*ccgE*caaP*ggtT*ctgV*gacE*tatL:2*ggaA*tttI*ctaQ:2*ctgW*tgcL:2*tggA*acgA*ccgV*gttS*ccgI:2*gaaG:1*ctgV*ggcR*agcG*ctaA*cgcN:1*aagQ:1*actW*ggaA*ctgD:1*gtaT:1*gacT*tgtR*gccF*gccL*gacG*gtcI*gtgG*ctgV*acgR:1*tcgV*caaL*gccS*gaaQ*acgG*cggS*gtcY*aggL:1*acgR*ataL-gctacacatggg*gcgR:2*actD:1*ccgA*gtcG*ataV*gcgT*ttgI*gatG*acaD:1*gacS*gagT*ccaA*tccA*ggaH*gatT:1*tgtR*gatS*ctcA*gatT*tctP*caaV*ctaA:1*gacE*tggG*agtP*tcgA*tatV:2*tatG:1*tcgA:3*gccG*aacA:2*ggtT*gtgA*gttI:2*atgP*cgtG*aacA:1*acgL*gaaS:1*gtcL*gacR*caaG*attL-atccgtaactatttt*cgcN*catQ*gagR*ggcV:1*gcgT*ccgD*aggA*ttgA*cccT*agcD*tcgV*gtcG*gttC:11*atgA*gttF*ggcV:1*tttS*attA*ccgA:1-ttt*gtcA:1*tgtA:1*gttL*atcW:1*acgA*agcP*ccaT*gagT:2*atcT*cgtA*aagS:1*gccF:2*atgL*caaS*ctgW:1*gctS*aaaD*cacS*cagG:1*ccaT*tttM*tcgT:6*ttcY*gatN:1-gcc*gtcI*gctG:1*actY*tccA*gaaR*gagR-gac*atgV*gcgS*gggE*ctgV:3*cacA*gtaL*aatR*acaV*ataT*atcL:2*gcgG:1*cagP:1*cagD*ccaC*aatD*acaG*ataL:1*aaaR:1*ctcA*cgcE*cggA*ttcM*cgtA:1*tacF*aatG*ttgF*atgD*cccA*gcaG:2*aagL:4*atgL:2*gcgS*gtgT*gttC*tacA*ctgV*gcgT*acgV*acgP*aagV*gcgP:1*tcaI*cctG*ccaL*acgL*tcaA*accD*gagR*ttcV*gatI*gctD*gatG:1*ttgG:1*cgaH*ggcK:2*gagV:1*agtG-actttcgaaactgagcgtgcaacgcgtttaatacgctaccacagcgacgacaag*gaaN:1*ttgI+PGME*cttV:2*gtcS*gatC*ccgG:1*tcgQ*aatA*atcA*gagG*ctcN*ggaA*ccgS*ggaR*cgtE:4*tggE:1*cacR:1*aagA*aatS*gtgM*tctM*accA:2*cacL*aatG*gcaQ*gacQ-gacgcgctcaatcgagataagttccaggccagcatccgggaggcctctgcgggaacg:1*aggI*tcgD:1+DD:1*cttF*cgcA:5*ttcY*ataL*gtaG*ggaA*gatG*gagG*ttcL*tacV*atcV*gtcC:2*atgA:1*gatE*ctcV:1*atcS*caaI*gacA:1*gtaR:1*catI*tatF:1*gatT*gatE*atcV:1*actL*acgV*gtcA*aagA*gagQ*tttV*accR:1+VRE:1*cggA:1*gcgV:1*tttL*tcaG*gtaT*tccG:1*gacR*gggS*gtgT*gagR+P*catG:2*attV:3*gtaF:1-actgagcat:3*aaaE-gtgactattatggatttc*tcgA*acgN*atcA*aaaR*aggA*ctgE*gtcL*gtaI*tcgQ*gcgR*ttgV*tcgA*aaaS*ttaE*catC:1*ctgI*catV*gtaP*acaS:1*tttV*cttV*ctgF:1*ccgS:2*gcgS:2*aagR:1*accS:3*attL*agcR:1*gcgL:1 +NC_000962.3 miniprot mRNA 484079 485680 416 + . ID=MP000128;Rank=1;Identity=0.2776;Positive=0.4173;Target=sp|P9WQ41|MBTM_MYCTU 31 512 +NC_000962.3 miniprot CDS 484079 485680 416 + 0 Parent=MP000128;Rank=1;Identity=0.2776;Target=sp|P9WQ41|MBTM_MYCTU 31 512 +##PAF tr|Q6MX34|Q6MX34_MYCTU 565 0 565 + NC_000962.3 699930 602818 604513 1695 1695 0 AS:i:2891 ms:i:2891 np:i:565 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:565M cs:Z::565 +NC_000962.3 miniprot mRNA 602819 604516 2891 + . ID=MP000129;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|Q6MX34|Q6MX34_MYCTU 1 565 +NC_000962.3 miniprot CDS 602819 604516 2891 + 0 Parent=MP000129;Rank=1;Identity=1.0000;Target=tr|Q6MX34|Q6MX34_MYCTU 1 565 +NC_000962.3 miniprot stop_codon 604514 604516 0 + 0 Parent=MP000129;Rank=1 +##PAF tr|L0T6I4|L0T6I4_MYCTU 244 0 244 - NC_000962.3 699930 466674 467406 729 732 0 AS:i:1245 ms:i:1245 np:i:244 fs:i:0 st:i:0 da:i:135 do:i:0 cg:Z:244M cs:Z:*gtgM:243 +NC_000962.3 miniprot mRNA 466672 467406 1245 - . ID=MP000130;Rank=1;Identity=0.9959;Positive=1.0000;Target=tr|L0T6I4|L0T6I4_MYCTU 1 244 +NC_000962.3 miniprot CDS 466672 467406 1245 - 0 Parent=MP000130;Rank=1;Identity=0.9959;Target=tr|L0T6I4|L0T6I4_MYCTU 1 244 +NC_000962.3 miniprot stop_codon 466672 466674 0 - 0 Parent=MP000130;Rank=1 +##PAF tr|L7N6A1|L7N6A1_MYCTU 532 0 532 - NC_000962.3 699930 674080 675916 987 1884 0 AS:i:1397 ms:i:1397 np:i:375 fs:i:0 st:i:0 da:i:0 do:i:2082 cg:Z:34M1I89M2D20M1I15M3D41M3I20M18D34M6D9M10D10M3I29M4D9M9D23M3D11M4D17M14D23M6D11M2I18M3I23M1D7M3I13M5D43M11D17M cs:Z::6*acgA:2*atgV*ctgM*accA*acgA:6*aaaN:3*acgS:1*actS:2*aacS*accA:3*gcgG+P*gtgT*gcgM*aaaG*gtgI:1*cccA:1*tcaG:7*gttI*gcgS:4*acgS:3*gaaG:3*gtcL:3*gtgL:1*acgA*tttY:1*gacN*cggQ:2*cagR*accA:1*tccN:1*gccG:1*agcG:2*gtgA*gccS:3*gtcA:2*gaaQ:1*agtT:2*gccN:1*gtcI:5*gcgT:1*ttcL:11*tccG:1-gggacc:2*gccN:5*atcL:9*tctA:1+D*gcgT*ccaA*ggaN*caaP*cgaN:2*gccN:2*gcgS:4-ggtaacggc:7*gtgA:1*accA*accA*ggcT:4*cacA:2*gcgN:9*gccP:2*tttA*ggcA:1*gccL:1*gcgT*gtcA:2+VSP*aacA:5*accA:3*ttcW:1*gtcH:7-ggcaacggcatcgccggtgtcacgggtacgtcggccagcacaccgggtggatcc:1*accS:1*ggcS:2*ggcP:1*atcA:2*aacA:2*gccD:2*gccR:2*gtgL:1*atgY:1*aacD:2*aacA:5*gagN-ggcgggcccggcggcgcc:1*ggtS*gcgN:1*gccV*agcT:1*gccV:1-gccaccaacttgggcgctgacggtcaagcc:5*aatA:3*ggcA+GLI:1*accN:2*gtcA:2*cccD:2*ggcN*cacG:2*ctcS*ggcN*ctcT:1*ggcA:1*cacG:7*agcA-ggcggtgacggc*ggaA*gctL*cccI:1*gacN:2*aacD:1-gctaccgggacgtggggtcacaacctt:1*gccH:2*accN:2*aatH:1*ggcN*aacS*ccgG:11-agcgtcggc:1*agcG:1*catG:1*gcgH*aacV:1*gcgL*cccI:1-accacctccacc*agcN:5*gacA:2*aaaN:1*gccG*gacN*gctD*atcN:2-ggacagaccggcgcgaacggtggcaggggtggcgacggcggt*cagT*gtgL*ggtA*aatD*ggcA:1*gccS:4*ggcA*cgcA:2*gccN:3*ggaF*tttY:1*tccN-gaagcgcccggtcgcccc:2*gccV:2*accR:2*gccN:2+FS*aacS*ggcA:2*cagS*gccG:4*accI:5*gccI:1+GLI:1*gatS:2*tccG:2*gctD:1*agcG*atcN:1*ttcG*aatQ:1*tccP*gctT:2*gccN:2*tcaD-ccc:2*aatA:3*ggtA+RLI:1*cctD:2*gccR:2*gagN:2*gccE:2-ctcgcgttggccgcc*tcgD:1*cagP*aacP:1*agcV*cagK:1*gctD:2*gacN:2*gccN:3*ggcA*gggV*actV*cctI:4*cacN:1*gccG:2*gcgG*ctcF:1*gtcI*aacP*ggtV:1*gtaS:4-ggccacggcggtgatcccggtgtcggcggtgcc:1*ggcS*cagR:1*ggaV*agcL*ggcF*tccG:7*cccD:1 +NC_000962.3 miniprot mRNA 674081 675916 1397 - . ID=MP000131;Rank=1;Identity=0.5239;Positive=0.5971;Target=tr|L7N6A1|L7N6A1_MYCTU 1 532 +NC_000962.3 miniprot CDS 674081 675916 1397 - 0 Parent=MP000131;Rank=1;Identity=0.5239;Target=tr|L7N6A1|L7N6A1_MYCTU 1 532 +##PAF tr|L7N6A1|L7N6A1_MYCTU 532 0 532 + NC_000962.3 699930 622792 624441 951 1757 0 AS:i:1384 ms:i:1384 np:i:362 fs:i:1 st:i:0 da:i:0 do:i:0 cg:Z:122M2D22M1I23M31D25M25I45M4D15M1D17M2I11M1D35M5I20M3I32M2D41M2D10M1D25M1D31M2F8D22M cs:Z::2*aatF*ttgV*ctgI*gtaA*accA:2*ctgV*gtgM:4*gcgT:3*ggtN:3*gctS:1*ggtS:2*aatS:3*gggA*gccG:3*gcgG*ctgI:9*gcgV:1*gtgI*gcgS:1*gtgL:1*tccG:1*tacH:2*caaG:2*gcgT:3*gcgQ*gcgL:2*tttY:1*gacN:6*gccN:4*gcgS:2*ggcS:6*gagQ:1*cagT:9*ctcQ*gcgT:13-gcggcc:1*accP:2*gccN:2*gcaP:12*tcgA:1+D*gcgT:1*gggN*cagP*gccN:2*gccN:2*gccS:5*cacN:2*accA:3-gtcaccggggtcagcaccaccggcgggccgggcggtcacggcggtgacgccggcctgtacgggtttggcggggccggtggcgcgggtgggttc:1*cagA*agcA*gggT*gcgG:6*gccN:6*gacN:2*gacP:3+AGLGTAGGVSPAGGAGGAAGLWGHG:1*gacA*aacG:1*ggtA*aacG*gagG:1*ggcA*accS:1*gtcA*agtP*gccG*gttA:2*gtgA:2*gccD:2*gctR:4*ttcY:1*aacD:2*gacA:2*gtcA:2*gacN:1*ggcS*gacN:1*agcV-agcacccaggat*tccT:1*ggtV*gatH:2*gcgN:6*ggtA:1-tgg:1*cttI:7*gccD:2*gccN*gccG*tcaG*atcL*aagS+NT*gttG:1*actS:2*ctgA:2*gatA:2-gat:1*gggA:1*ttcI:1*tttN:5*tggH:2*cgcN:1*gtgG*gatH*gctG*cgaN*ttcS:1*gcgG:4*gctG:7+AGGHV*tggG:1*tacI:1*gatN:2*gccN:2*gtcA:2*gtcN:2*gctN*gtcD*ttcN:1+STL*cttA*tccD*tccA:1*gacS:4*gggA:3*ggtN:2*tggL*ttgF*ttcY:4*gacV:2*gccR:2*ggcN:2-ggccgc:1*ggcS:1*ggcA*agcG*ggtT*gccS:4*gctG*gtcI:5*gcgI:1*gcgG*tggL*ttcI:1*aacS:2*gccG:2*gtcD:2*ggcN:2*cgcQ*ggcA*accP:1*gccP-atcggt:1*gacN*gggA:1*gccD:5-gcg*ggtN*gggA*tggR:1*tacI:4*gccR:2*gccN:2*ggtE:2*cgcD:1*ggcP*accP:1*aacV*gatK-ggt:4*gacN:2*cgcN:2*gatN:1*cagV*ctgV*cttI:4*gacN:5*gccF:1*gggI:1*gccV:1-tt-ggcgcttcccccggggccggcgcg*gccS:2*ggcA:2*gccS*ggcR:1*tcgV:3*agcT:2*acgA*accN:1*ccgA*cacD:1 +NC_000962.3 miniprot mRNA 622793 624444 1384 + . ID=MP000132;Rank=2;Identity=0.5413;Positive=0.6181;Frameshift=1;Target=tr|L7N6A1|L7N6A1_MYCTU 1 532 +NC_000962.3 miniprot CDS 622793 624444 1384 + 0 Parent=MP000132;Rank=2;Identity=0.5413;Frameshift=1;Target=tr|L7N6A1|L7N6A1_MYCTU 1 532 +NC_000962.3 miniprot stop_codon 624442 624444 0 + 0 Parent=MP000132;Rank=2 +##PAF tr|L7N6B9|L7N6B9_MYCTU 434 0 434 + NC_000962.3 699930 613037 614339 1302 1302 0 AS:i:2198 ms:i:2198 np:i:434 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:434M cs:Z::434 +NC_000962.3 miniprot mRNA 613038 614342 2198 + . ID=MP000133;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N6B9|L7N6B9_MYCTU 1 434 +NC_000962.3 miniprot CDS 613038 614342 2198 + 0 Parent=MP000133;Rank=1;Identity=1.0000;Target=tr|L7N6B9|L7N6B9_MYCTU 1 434 +NC_000962.3 miniprot stop_codon 614340 614342 0 + 0 Parent=MP000133;Rank=1 +##PAF tr|O07430|O07430_MYCTU 691 0 691 + NC_000962.3 699930 216268 218341 2073 2073 0 AS:i:3600 ms:i:3600 np:i:691 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:691M cs:Z::691 +NC_000962.3 miniprot mRNA 216269 218344 3600 + . ID=MP000134;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07430|O07430_MYCTU 1 691 +NC_000962.3 miniprot CDS 216269 218344 3600 + 0 Parent=MP000134;Rank=1;Identity=1.0000;Target=tr|O07430|O07430_MYCTU 1 691 +NC_000962.3 miniprot stop_codon 218342 218344 0 + 0 Parent=MP000134;Rank=1 +##PAF tr|O53398|O53398_MYCTU 301 0 193 - NC_000962.3 699930 573249 573801 204 579 0 AS:i:247 ms:i:247 np:i:102 fs:i:0 st:i:0 da:i:0 do:i:201 cg:Z:52M3I7M2I13M4I112M cs:Z::1*acgA*acaR*atcQ*ggcR*accF:1*aagD*cgaQ:1*gccV*gtgL*gtcI:12*agaK*accA*cttF:1*gccR*cagE:1*tttA*cacV:1*gtcA*gcgL*gtgA:3*gcgE*gacG*cggA*atcL*accR*gcgR*ctgV:1*aacR*cagE:1+EAA:2*accR:1*attM:2+PL:2*actS*gacS*gacS*gccE*gccS:1*gaaR:1*ttgM*gccV*cgcA+DVVG*gcgE*ctgF*agcG:1*gtgI:2*ctgV*gtcF:4*ggcV*gccS*aagL*gggV*cttG*cagP*ttcV*gtcD:1*gatE*gccT*gatF:1*gagD*cacD*tggT:1*tggE:1*tggL*gacE*accI*aacD*gtaY:3*ctgV:2*accV:1*gcgE*ctgV:2*aagI*ctgM*atcK*gacQ*tccQ*ggcR*gacS:1*ctgR:1*gtcM*accN*gtcM*accS:1*atcV*gccV*gcgG*atcR*gagK*gtgA*tacF*gacA*ggcR*ggcF:3*accS*gctS:1*aagM:2*cagI*ggcA*gcgG*ctgF*catS*cgcD*acgA:2*ggcQ:2*ctgR:1*aagS*ccgG*gtcI*cggA*ctcV*accS*gagV:1*gctH:1*ggtA*gcgL*gtcT*gagQ:1 +NC_000962.3 miniprot mRNA 573250 573801 247 - . ID=MP000135;Rank=1;Identity=0.3523;Positive=0.5285;Target=tr|O53398|O53398_MYCTU 1 193 +NC_000962.3 miniprot CDS 573250 573801 247 - 0 Parent=MP000135;Rank=1;Identity=0.3523;Target=tr|O53398|O53398_MYCTU 1 193 +##PAF tr|O53611|O53611_MYCTU 745 0 745 - NC_000962.3 699930 72276 74511 2235 2235 0 AS:i:3844 ms:i:3844 np:i:745 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:745M cs:Z::745 +NC_000962.3 miniprot mRNA 72274 74511 3844 - . ID=MP000136;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53611|O53611_MYCTU 1 745 +NC_000962.3 miniprot CDS 72274 74511 3844 - 0 Parent=MP000136;Rank=1;Identity=1.0000;Target=tr|O53611|O53611_MYCTU 1 745 +NC_000962.3 miniprot stop_codon 72274 72276 0 - 0 Parent=MP000136;Rank=1 +##PAF tr|O53670|O53670_MYCTU 646 0 646 - NC_000962.3 699930 298865 300803 1938 1938 0 AS:i:3397 ms:i:3397 np:i:646 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:646M cs:Z::646 +NC_000962.3 miniprot mRNA 298863 300803 3397 - . ID=MP000137;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53670|O53670_MYCTU 1 646 +NC_000962.3 miniprot CDS 298863 300803 3397 - 0 Parent=MP000137;Rank=1;Identity=1.0000;Target=tr|O53670|O53670_MYCTU 1 646 +NC_000962.3 miniprot stop_codon 298863 298865 0 - 0 Parent=MP000137;Rank=1 +##PAF sp|O53778|VPB26_MYCTU 71 0 71 + NC_000962.3 699930 677709 677922 210 213 0 AS:i:349 ms:i:349 np:i:71 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:71M cs:Z:*gtgM:70 +NC_000962.3 miniprot mRNA 677710 677925 349 + . ID=MP000138;Rank=1;Identity=0.9859;Positive=1.0000;Target=sp|O53778|VPB26_MYCTU 1 71 +NC_000962.3 miniprot CDS 677710 677925 349 + 0 Parent=MP000138;Rank=1;Identity=0.9859;Target=sp|O53778|VPB26_MYCTU 1 71 +NC_000962.3 miniprot stop_codon 677923 677925 0 + 0 Parent=MP000138;Rank=1 +##PAF tr|O86361|O86361_MYCTU 440 0 440 + NC_000962.3 699930 292170 293490 1317 1320 0 AS:i:2210 ms:i:2210 np:i:440 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:440M cs:Z:*gtgM:439 +NC_000962.3 miniprot mRNA 292171 293493 2210 + . ID=MP000139;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|O86361|O86361_MYCTU 1 440 +NC_000962.3 miniprot CDS 292171 293493 2210 + 0 Parent=MP000139;Rank=1;Identity=0.9977;Target=tr|O86361|O86361_MYCTU 1 440 +NC_000962.3 miniprot stop_codon 293491 293493 0 + 0 Parent=MP000139;Rank=1 +##PAF tr|P96812|P96812_MYCTU 201 0 201 - NC_000962.3 699930 162646 163249 600 603 0 AS:i:999 ms:i:999 np:i:201 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:201M cs:Z:*gtgM:200 +NC_000962.3 miniprot mRNA 162644 163249 999 - . ID=MP000140;Rank=1;Identity=0.9950;Positive=1.0000;Target=tr|P96812|P96812_MYCTU 1 201 +NC_000962.3 miniprot CDS 162644 163249 999 - 0 Parent=MP000140;Rank=1;Identity=0.9950;Target=tr|P96812|P96812_MYCTU 1 201 +NC_000962.3 miniprot stop_codon 162644 162646 0 - 0 Parent=MP000140;Rank=1 +##PAF tr|P96821|P96821_MYCTU 280 0 280 + NC_000962.3 699930 170283 171123 837 840 0 AS:i:1440 ms:i:1440 np:i:280 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:280M cs:Z:*gtgM:279 +NC_000962.3 miniprot mRNA 170284 171126 1440 + . ID=MP000141;Rank=1;Identity=0.9964;Positive=1.0000;Target=tr|P96821|P96821_MYCTU 1 280 +NC_000962.3 miniprot CDS 170284 171126 1440 + 0 Parent=MP000141;Rank=1;Identity=0.9964;Target=tr|P96821|P96821_MYCTU 1 280 +NC_000962.3 miniprot stop_codon 171124 171126 0 + 0 Parent=MP000141;Rank=1 +##PAF sp|P9WGR5|Y484_MYCTU 251 0 251 - NC_000962.3 699930 573048 573801 753 753 0 AS:i:1247 ms:i:1247 np:i:251 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:251M cs:Z::251 +NC_000962.3 miniprot mRNA 573046 573801 1247 - . ID=MP000142;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGR5|Y484_MYCTU 1 251 +NC_000962.3 miniprot CDS 573046 573801 1247 - 0 Parent=MP000142;Rank=1;Identity=1.0000;Target=sp|P9WGR5|Y484_MYCTU 1 251 +NC_000962.3 miniprot stop_codon 573046 573048 0 - 0 Parent=MP000142;Rank=1 +##PAF sp|P9WH79|RL9_MYCTU 152 0 152 + NC_000962.3 699930 59408 59864 456 456 0 AS:i:751 ms:i:751 np:i:152 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:152M cs:Z::152 +NC_000962.3 miniprot mRNA 59409 59867 751 + . ID=MP000143;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WH79|RL9_MYCTU 1 152 +NC_000962.3 miniprot CDS 59409 59867 751 + 0 Parent=MP000143;Rank=1;Identity=1.0000;Target=sp|P9WH79|RL9_MYCTU 1 152 +NC_000962.3 miniprot stop_codon 59865 59867 0 + 0 Parent=MP000143;Rank=1 +##PAF sp|P9WIP9|HBHA_MYCTU 199 0 199 + NC_000962.3 699930 565796 566393 597 597 0 AS:i:950 ms:i:950 np:i:199 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:199M cs:Z::199 +NC_000962.3 miniprot mRNA 565797 566396 950 + . ID=MP000144;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WIP9|HBHA_MYCTU 1 199 +NC_000962.3 miniprot CDS 565797 566396 950 + 0 Parent=MP000144;Rank=1;Identity=1.0000;Target=sp|P9WIP9|HBHA_MYCTU 1 199 +NC_000962.3 miniprot stop_codon 566394 566396 0 + 0 Parent=MP000144;Rank=1 +##PAF sp|P9WK03|Y089_MYCTU 197 0 197 + NC_000962.3 699930 97757 98348 588 591 0 AS:i:1049 ms:i:1049 np:i:197 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:197M cs:Z:*gtgM:196 +NC_000962.3 miniprot mRNA 97758 98351 1049 + . ID=MP000145;Rank=1;Identity=0.9949;Positive=1.0000;Target=sp|P9WK03|Y089_MYCTU 1 197 +NC_000962.3 miniprot CDS 97758 98351 1049 + 0 Parent=MP000145;Rank=1;Identity=0.9949;Target=sp|P9WK03|Y089_MYCTU 1 197 +NC_000962.3 miniprot stop_codon 98349 98351 0 + 0 Parent=MP000145;Rank=1 +##PAF sp|P9WMJ9|DNAK_MYCTU 625 0 625 + NC_000962.3 699930 419834 421709 1875 1875 0 AS:i:3129 ms:i:3129 np:i:625 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:625M cs:Z::625 +NC_000962.3 miniprot mRNA 419835 421712 3129 + . ID=MP000146;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMJ9|DNAK_MYCTU 1 625 +NC_000962.3 miniprot CDS 419835 421712 3129 + 0 Parent=MP000146;Rank=1;Identity=1.0000;Target=sp|P9WMJ9|DNAK_MYCTU 1 625 +NC_000962.3 miniprot stop_codon 421710 421712 0 + 0 Parent=MP000146;Rank=1 +##PAF sp|P9WNH1|BPOC_MYCTU 262 0 262 + NC_000962.3 699930 645466 646252 783 786 0 AS:i:1356 ms:i:1356 np:i:262 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:262M cs:Z:*gtgM:261 +NC_000962.3 miniprot mRNA 645467 646255 1356 + . ID=MP000147;Rank=1;Identity=0.9962;Positive=1.0000;Target=sp|P9WNH1|BPOC_MYCTU 1 262 +NC_000962.3 miniprot CDS 645467 646255 1356 + 0 Parent=MP000147;Rank=1;Identity=0.9962;Target=sp|P9WNH1|BPOC_MYCTU 1 262 +NC_000962.3 miniprot stop_codon 646253 646255 0 + 0 Parent=MP000147;Rank=1 +##PAF sp|P9WPT5|CTPC_MYCTU 718 0 711 - NC_000962.3 699930 119935 122173 714 2325 0 AS:i:744 ms:i:733 np:i:361 fs:i:0 st:i:0 da:i:-1 do:i:18 cg:Z:9M4D13M1I18M12I1M2I41M17D19M5D51M22D18M4D33M7I121M4D12M4D66M3D37M4I29M1D22M1I42M1I68M1I82M cs:Z:*gtgM*gcgT*gctL*ccaE:2*ggaS:2-gacctgcagtcg*gtgA*cggG:1*atcM:1*ctcV*gatK:1*ttgD*ggtW*atgV*tcaR:1+D*gcgS*gccR*tgtR:1*agcV*cgcA:2*acgE*aagA*ctcV*aacA:1*atcQ*cccN:3+VVHAYPRTGSVV*gcaV+WY:1*gtcP*aacR*ttcR:1*accD:1*gtcA:1*accV*atcL*gatA:1*gtgI*ggcK*atgG:2*gatH*gagV*ctgA*tgcA*gggE*gtgL*gtcI*gagP*aaaA*gccR*ggaA*tacP:1*gcgS:1*ccgE*cacI*accR*gagN:1*accD:2-gacaaacggacaaaggatcccgacggcgcccacgcccgcagactgctgcgg:1*ctgM*ctaV*gtcI*gcgG*gcgG:1*ttgA*ttcL*gtgA*ccgL:1*gctG*gacV*ctgR*tcgR*acgY*ttgV:1-gcgatcgtccccagc:2*gttP:1*ggcL*tggL:1*tacT*ataT*ttgG*acgR*gccT*ctgV:1*gctT*ccgG:1*gtgT*accI*tggF*gccT*gcaG*tggY:2*cacL*tcgR*gtcG:3*aacS*gcgL:1*cacS*cggG*acgK*acaA*tccG*atgT*gaaD*acgA:1*atcV:1*gtcA*gggA*atcT:2*gccS-accgcctggtcgctttcgtccgtcttcggcgatcagccgccacgggaaggctcgggaatctggcgg*gccL:2*aacR*agcE*gacN*tcgV*atcV*tacA:1*gagT:1*gcgL*gccW*ggtL*gtgL*accN*gtcI-ttcgttcttgcc:1*cgtE:1*tttL*gaaQ*gcaD*cgaL*gccT*aagL*tccR*aagR*gccT*ggcR*agcR:1*ctgI*cgtS*gcgE:1*gcgL*gagR*ctaG*ggcN*gccQ*aagD*aatT*gtgA*gcgW:1*ctgR:1*cccT:1+PSAGSDA*ggcA*gcgT:1*ctaI*gtgQ*ataV:1*gcgI*agcD*gaaT*ctcV*aagQ*aagI*cgcG*cagD*cgcE*ttcV:1*acgV*cggH*ccgE*gggH*gaaV*accA:1*gcaP*gctV:2*gtcE:4*agcE:1*gcgI*atcV*gatN*atgQ:2*atgI:3*gccN*aagL:2*cgtS*gccV*tatV*ccgV*gcgG*gccT*tcgR:1*gtgH*gggA:1*acgS:2*atgV*gacR:2*ctgV:1*atcV*gagR:1*accH:3*gccN*gatQ:1*cagT*ttcI*gccG*gcgR*atgI*gtcI*cgcS*ctcR:2*caaE:2*acgL*cagD*aagR:1*cgtP*gccI:1*cgcT*ctcV*gccG*gacE*cacN*atcF*gcgS*ggcR*gtgR:3*gtgT*gttS:1*gtcI*attV*gctS*ggaA*cttI:1-ggtgcggcctgg:1*gtcL*agcI*ggcT*gcaG*ggcD*gcgV*gatR:2*ttcM*tcgT-gtcacgctaggg*gtgM:1*gtgL:6*cttV:2*gcgS:4*atgI*atgS*gttA:1*tccI:1*cggN:2*cagR*ctaR:2*tttL:3*tacG*cggS*gcaH:2*accQ*atcA*cggG*agcR*atcV:1*accA*gtgI:11*cagR*ctgP*gcgV:1*agcT*accN*gtaI*acaV-atggcaggt*tcaA*ggcM*accH*agcK*gagD*cgaW*gatE*cgcP:1*gaaQ:2*ggcA*ctcY:2*gctS*gtcS:1*tcgI*gctH:1*gagR:1*gcgP*atgL:1*gcgE:1*atcV*gttI*gccR*gctS*tcgT*ccgE*gatE*ccgR+RISI*ggtP:1*gtcH*aacE*gggE*tttC*gtcE*gccV*gtcL*gcgV:1*tgcL:1*gtaM*tcgR*gggT*gaaW*gtcA*ggcD:1*catR*cacT*gttL*gagL*gtcL:1*aagS:2-tgg*attL*accL:1*accA*acgE*cccK*tgcV*cacR*gacV*gcgS*gctK*ctgK*gtgA:1*gcgE*cgcW*ctgV:1*ggcK*gaaL*tccR:1+Q*ggcA:2*gtcP*gttL*tttL*gtgL*tcgA:3*gtcT*gtcL*cgcV*gcaG*gccL*ctgI*acaS*atcL*gccR:1*accE*ctcV*aagR*gatP*tcaE:2*gccQ*gccV*gtcL*gctT*gcgK:2*agcA*cgcN:1*ctgI:1*acgR:1+V*ctgM:4*aatH*cggP*gccE*gccI:1*gacQ*gcgV:2*gcgD*cagE*gtcL:3*tccE*gctW*gtcR:1*gatE*atgV*ctgM:2*ggcD:1*gtcL*gacA*gtgA*atcV*caaR*cggE:1*cgcQ*gagD*gaaD:1*catY*accV:1*gccG:8*ggtA:3*gtgA*ggtA:2*ttgI:1*ttgI:1*atcM:1+L*cgtA:5*ctcV*ggtE*gcaT:2*atcV*attA:1*gtgA*cgcN:3*aatH*actR*gttL*ccgL*cagD*gcgV*ctgG:2*gccG*cgtE*gcaR*accA*atgV*cggD*acgV:2*atgQ:1*atgY*atcG*tggM*gcgS*ttcI*gggA*tacV:1*gtcA:1*gccG*atcL*ccgL:1*gccG:1*gccG:1*ctgA:1*aacS:1*ttgV*atcL:1*ggtA*gccI*gccL*atgH*gcgN*ttcA:2*tttV*ttcA:2*tcaA:2*ttgS:2 +NC_000962.3 miniprot mRNA 119936 122173 733 - . ID=MP000148;Rank=1;Identity=0.3071;Positive=0.4658;Target=sp|P9WPT5|CTPC_MYCTU 1 711 +NC_000962.3 miniprot CDS 119936 122173 733 - 0 Parent=MP000148;Rank=1;Identity=0.3071;Target=sp|P9WPT5|CTPC_MYCTU 1 711 +##PAF sp|P9WQM7|ANSP2_MYCTU 487 0 487 - NC_000962.3 699930 415504 416965 1461 1461 0 AS:i:2485 ms:i:2485 np:i:487 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:487M cs:Z::487 +NC_000962.3 miniprot mRNA 415502 416965 2485 - . ID=MP000149;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WQM7|ANSP2_MYCTU 1 487 +NC_000962.3 miniprot CDS 415502 416965 2485 - 0 Parent=MP000149;Rank=1;Identity=1.0000;Target=sp|P9WQM7|ANSP2_MYCTU 1 487 +NC_000962.3 miniprot stop_codon 415502 415504 0 - 0 Parent=MP000149;Rank=1 +##PAF sp|Q10891|Y095_MYCTU 98 0 98 - NC_000962.3 699930 104807 105101 294 294 0 AS:i:486 ms:i:486 np:i:98 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:98M cs:Z::98 +NC_000962.3 miniprot mRNA 104805 105101 486 - . ID=MP000150;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|Q10891|Y095_MYCTU 1 98 +NC_000962.3 miniprot CDS 104805 105101 486 - 0 Parent=MP000150;Rank=1;Identity=1.0000;Target=sp|Q10891|Y095_MYCTU 1 98 +NC_000962.3 miniprot stop_codon 104805 104807 0 - 0 Parent=MP000150;Rank=1 +##PAF tr|Q6MWY0|Q6MWY0_MYCTU 1538 0 956 - NC_000962.3 699930 672454 675922 1611 2991 0 AS:i:2407 ms:i:2456 np:i:618 fs:i:0 st:i:0 da:i:-1 do:i:-1 cg:Z:8M1D27M1I59M6I77M3D28M3D55M4D20M693U1M1D23M12D21M2I27M2D66M5I114M7I7M5I11M10I29M5I7M10I11M3I32M1I9M7D10M2D11M7I25M2I47M4I44M6D70M1I4M2I41M cs:Z:*agcM*gagV:2*ttcL*gtaM*atcV:1-acg:2*atgL*ctgV*accA*acgA:2*acgA:2*gcgT*aaaG:2*tcgQ*acgA:1*actS:3*accA:3*gcgG+P*gtgT*gcgT*aaaQ:2*cccA:1*tcaA*gccG:4*gtgA:1*gttI:12*accA*gtcL:2*caaR:5*gacE*cggQ:2*cagR*accS:1*tccT:2*gcgG:1*tcgA:1*gtgA*gccT:3*gtcA:1+ASPLQA*gttL:2*agtQ*ttgV:1*gccG:1*gtcI:5*gcgL*ctgW*ttcL:6*aacD:1*gccV*gacH:1*tccA:5*gccP:2*ccaA:2*atcL:1*tacW:10*ccaA:2*cgaV:2*gccP:6*atcF:4*aacS:2*gccS:2-gtgggtacc*accA:1*gggA:3*cacV:2*gcgS:4*tatN:7*tttA:2*gccT:2-gtcggcggc:6*accN:1*gggW:3*gtcA:2*gccS:4*ggcT:2*atcG*gccV:1*gtcG*acgS:1*acgG*tcgF*gccV*agcY*acaG*ccgN:2*tccA:1*accG*gctI:2*gccI:8*gccD*ggcA:1-gccggcggggtg:1*atgF:4*aacA:4*ggcA*gagA:1*gggL:2*ggcA:2*gL~gt690ag-gc*tcaN-ccc:2*aatD:1*ggtS*aacD:2*cctN:2*gccT:2*gagN:2*gccR:3*gcgL*ttgV-gccgcctcgggccagaacggcagccagggcgctggc:1*gacN:5*aacA:2*actV*cctG:1*aacD:2*cacK:1*gccG:2+DP*gcgS*ctcF*ggtA:2*ggtN:1*gtaA:2*gccN:5*gatN:8*cagA:1-ggaagc:1*tccL*accL*cccA:2*aacH:2*cccA:1*aacA:9*aacD:2*agaI:2*gatT:1*accN*ggcS*tttP*ggcL:1*accA:1*gcgG*tccA:2*aggN:2*gatH:8*gccT:5*aacA:1*agcH*aaaA:1*ctgS*cccT:1+ATGTA:1*ggcQ*aggP*ctcT:1*aacG*cccN:1*ctgT*gatN:2*accA:2*aacH:2*gccN:2*tccN:3*tggQ*gcgH:1*aacD:2*accV:2*gccK:2*accA:2*gtcS:2*actA:2*tccN:1*agcF:1*ggtA*gtcA*aacT*ggtL*tccG:1*gcgP:4*cacG*cccM:2*accN:2*gttK:2*accD:3*ggtA:4*gacA:1*gggA:1*gcaG*cccD*aacV*ggcT*gtcL:1*ggcV*agcN:2*cccA:2*gccD:2*gacN:2*accE*ggcV:4*aacK:2*cgcA:1+GVSANPA*attL*gacN:1*gccS*gacA:2+NGTAP:1*gcgS:1*gccG*cgcN:1*cagG*gatN:3+GATPTVAGEN:5*aagN:2*cgaH:2*accS*ggcV:1*ccgN:4*ccgG:2*acaG*accN:1*agcV*caaA:1*gccT+GLALN:5*agcN:1+GIGGNGGSAA:5*cccG:1*gacK:3+GGA:4*agcQ*gtgD:1*accS*aacA*aacS*ggcA*atcN:1*ggcA:3*aacQ:3*gccG:1*cccN*agcG:1*gccI:2*agtK:2+D:1*ggcF*tccA:2*ggtA*gcgK*accA:1-tcaagcagcagcattcatgtc:3*aacA:6-ggcgac*catV*gccG*ctcV*agcA:1*aacQ:1*gcgG:3+KGAIPAM*aacK:1*ggcA*aacT:1*ggcA*aacD:1*agcT*ctgA*cgcP*ggcT:3*gccD:2*cacN:4*ggcA*aatS+PT*gccV*agcA*aggG:1*atgN:5*accK:2*gccS:3*gccV:1*cagN*attG:9*ggaA*gacA:1*ggcQ*accA:1*agtT*gacP:1*aatP*cccT*ggaS*gccG*attD*accS:1*agcT+SGTD:2*cgcA:2*gacN:2*gtaA:2*caaA:2*agcT*gtcL:2*gacH:1*gctG*gacN:2*cggK:2*gccN:2*acgQ:2*acgI:1*ctgG*cggA:1*accE*accR:2*accD:1-gcgaccggcacattcgac:2*gcgP*gacN*ggtA*cacN:1*ggtA:2*ggcE*accN:2*gttS:2*accN:2*gccD:2*ggcA:10*ctgQ*tcgA*ccaA*acgG*ggcY*aacT*aacD:1*agcA*caaT:1*gccT:5*gccN:2*gccD:2*accK*ggcA:1*accD:2*gacA:1*ggcE*agaN:1*gccL*cacN+S:1*actA*ctcM*ttcL+PG*agcG*agcG*ctcT*gctV:1*actN*ggcP:7*accN:2*accN*ggcA:1*accV:2*gccT:2*gccK*ggcA:4*accL*ctgT:1*gcgL*accD:1*gcgT*acaD:1 +NC_000962.3 miniprot mRNA 672455 675922 2456 - . ID=MP000151;Rank=1;Identity=0.5386;Positive=0.6199;Target=tr|Q6MWY0|Q6MWY0_MYCTU 1 956 +NC_000962.3 miniprot CDS 675067 675922 860 - 0 Parent=MP000151;Rank=1;Identity=0.6143;Target=tr|Q6MWY0|Q6MWY0_MYCTU 1 281 +NC_000962.3 miniprot CDS 672455 674376 1596 - 2 Parent=MP000151;Rank=1;Identity=0.5071;Target=tr|Q6MWY0|Q6MWY0_MYCTU 282 956 +##PAF tr|I6WYT7|I6WYT7_MYCTU 508 0 508 + NC_000962.3 699930 690500 692024 1524 1524 0 AS:i:2629 ms:i:2629 np:i:508 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:508M cs:Z::508 +NC_000962.3 miniprot mRNA 690501 692027 2629 + . ID=MP000152;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|I6WYT7|I6WYT7_MYCTU 1 508 +NC_000962.3 miniprot CDS 690501 692027 2629 + 0 Parent=MP000152;Rank=1;Identity=1.0000;Target=tr|I6WYT7|I6WYT7_MYCTU 1 508 +NC_000962.3 miniprot stop_codon 692025 692027 0 + 0 Parent=MP000152;Rank=1 +##PAF tr|I6Y7N2|I6Y7N2_MYCTU 286 0 286 - NC_000962.3 699930 452296 453154 855 858 0 AS:i:1440 ms:i:1440 np:i:286 fs:i:0 st:i:0 da:i:42 do:i:0 cg:Z:286M cs:Z:*gtgM:285 +NC_000962.3 miniprot mRNA 452294 453154 1440 - . ID=MP000153;Rank=1;Identity=0.9965;Positive=1.0000;Target=tr|I6Y7N2|I6Y7N2_MYCTU 1 286 +NC_000962.3 miniprot CDS 452294 453154 1440 - 0 Parent=MP000153;Rank=1;Identity=0.9965;Target=tr|I6Y7N2|I6Y7N2_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 452294 452296 0 - 0 Parent=MP000153;Rank=1 +##PAF tr|L0T6B3|L0T6B3_MYCTU 180 0 180 - NC_000962.3 699930 467461 468001 540 540 0 AS:i:909 ms:i:909 np:i:180 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:180M cs:Z::180 +NC_000962.3 miniprot mRNA 467459 468001 909 - . ID=MP000154;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L0T6B3|L0T6B3_MYCTU 1 180 +NC_000962.3 miniprot CDS 467459 468001 909 - 0 Parent=MP000154;Rank=1;Identity=1.0000;Target=tr|L0T6B3|L0T6B3_MYCTU 1 180 +NC_000962.3 miniprot stop_codon 467459 467461 0 - 0 Parent=MP000154;Rank=1 +##PAF tr|O06831|O06831_MYCTU 535 15 530 + NC_000962.3 699930 324680 326240 699 1569 0 AS:i:1060 ms:i:1060 np:i:315 fs:i:0 st:i:0 da:i:114 do:i:6 cg:Z:23M1D5M2I125M5D9M1I12M1D18M1D320M cs:Z:*tcgA:1*gcgL:1*gggA*ctgP*gagL*ccgR:1*ctgD*aacR:1*gccL*gcgR*ctcI*gcaV:1*gatA*atcM:1*aagR*tggE:1-gaa*gtcM:1*atgF*ctgT*ccgA+GF*tcgA*cacG*aatA:3*gccC:1*aacD:1*gcgP*gccG*gtcL:3*gaaL:4*tttW*tccR*gaaQ:3*gccR*gcaG*cacN:1*gtgL:1*aatA*ggcA:1*ctgQ:1*aagL*ggtP*gtcA*cgcG*gccP*gggP*gacR*ggcV:1*gccG:1*ttgM*gcgC:4*tggG:2*atcD:1*aacL*tacL*gggA*gcgV*gccN:1*gtgI:2*cgcH:1*atcL:3*agcT*gagS:1*tccA:2*cagA*atcL*aaaA:2*tcgV*gacT:3*gccV*aagD*gtgT*atcV*atcV:2*gacE:1*tacF*accS*aagA*gccT:1*agcD*ttgR:1*cagL*ccaA*ccgE*ttgK*ggcP*aagQ*ctgA*cggT*gcgR*cttI*ggtV*gtcA*aatW*cccT:1*gacE:1-aagccgtcgggcagc*tccH:1*gaaL:1*ttgV*gccE*gagK:1*attV+A:2*agcA*agcG*accR*gcgR:1*gccE*ccgH*aagT*gcgG:1-cgc*cgtH*gcgG*tcgK*atcV:1*attL:12-aac:1*aacH*acaS*ccgG*ccgG*acgG*ctgI*gctG*ccgT*atcL*ggcK*ggcA:2*tcgD*cacR*gtgT:1*ttcW*aagR:1*ggcE:3*ctgV*ttgI*ccgV*tcgA:5*ctgW:1*tacF*atgS*cacQ*gccL*gcgV:2*atgS*ttcS:1*ggcA*tcgC:1*ctgI:1*ctgT:4*aagD:1*gcgE*ttgA*gtgT:1*gaaD*gacL:1*gaaD*aagR:1*aagH:2*tccG*atgL:6*ctgF*tcgD:2*ctcM:1*cagL*ctgP*gagA*aaaE*accI*gaaR*cccN*aagR*cccY:1*ttgG*tcgR:2*aagR*atcF*gtgA*ttcA*gtaA:3*caaR*ttgM*ggtR*gccP*gagD*ctgV*gccV*accI*cgcA*gcgF*ctgM*gggD*gacQ*ctcF:1*ccgD:4*atgN:1*ggcN*tcgA:2*gtcA*gcgG*ttcM*gccI*accA*atcT:1*ggcT:1*aagA:2*cagR*ttcT*aacA:1*agcD:1*gtgA:1*cccR*gtcP*gtcA*aagE:1*gtgT*acgE*gttI*aagR:3*gagQ*aacQ*ggcF*aatT:3*cagT:1*gccE:2*cggT:1*tttY:1*ggcR:1*gccD*ttcS*ccgQ:1*gagD:3*ggcS:1*ggtA*ggcA:1*cagD*atcF*atcH*gacA:1*ctgF*ttgM:7*ttcL:2*cgcN:1*ctgR:1*tatF:1*agcV:13*gtgI*tttY:1*gccI:3*gatK*ctgT*atcL*agcA*gggT:4*gtgA:3*gcgV:5*aagQ*gagQ*ttcY:1*gccQ:2*cgcA:4*aagL:3*gctV*gacS*ctcA*gacT*gagP*gacE:1*atcL:2*tacH:3*catN:2*cgcN:5*gagD*gtgI*atcA*ttcV:6*aacG*cccI:3*gtcI:1*aaaR*cgtT:2*cgcQ +NC_000962.3 miniprot mRNA 324681 326240 1060 + . ID=MP000155;Rank=1;Identity=0.4455;Positive=0.6023;Target=tr|O06831|O06831_MYCTU 16 530 +NC_000962.3 miniprot CDS 324681 326240 1060 + 0 Parent=MP000155;Rank=1;Identity=0.4455;Target=tr|O06831|O06831_MYCTU 16 530 +##PAF tr|O07230|O07230_MYCTU 302 0 302 + NC_000962.3 699930 365233 366139 906 906 0 AS:i:1561 ms:i:1561 np:i:302 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:302M cs:Z::302 +NC_000962.3 miniprot mRNA 365234 366142 1561 + . ID=MP000156;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07230|O07230_MYCTU 1 302 +NC_000962.3 miniprot CDS 365234 366142 1561 + 0 Parent=MP000156;Rank=1;Identity=1.0000;Target=tr|O07230|O07230_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 366140 366142 0 + 0 Parent=MP000156;Rank=1 +##PAF sp|O07436|LDT4_MYCTU 366 0 366 + NC_000962.3 699930 223563 224661 1098 1098 0 AS:i:1989 ms:i:1989 np:i:366 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:366M cs:Z::366 +NC_000962.3 miniprot mRNA 223564 224664 1989 + . ID=MP000157;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O07436|LDT4_MYCTU 1 366 +NC_000962.3 miniprot CDS 223564 224664 1989 + 0 Parent=MP000157;Rank=1;Identity=1.0000;Target=sp|O07436|LDT4_MYCTU 1 366 +NC_000962.3 miniprot stop_codon 224662 224664 0 + 0 Parent=MP000157;Rank=1 +##PAF sp|O07783|VAPC4_MYCTU 130 0 130 - NC_000962.3 699930 694841 695231 387 390 0 AS:i:644 ms:i:644 np:i:130 fs:i:0 st:i:0 da:i:114 do:i:0 cg:Z:130M cs:Z:*gtgM:129 +NC_000962.3 miniprot mRNA 694839 695231 644 - . ID=MP000158;Rank=1;Identity=0.9923;Positive=1.0000;Target=sp|O07783|VAPC4_MYCTU 1 130 +NC_000962.3 miniprot CDS 694839 695231 644 - 0 Parent=MP000158;Rank=1;Identity=0.9923;Target=sp|O07783|VAPC4_MYCTU 1 130 +NC_000962.3 miniprot stop_codon 694839 694841 0 - 0 Parent=MP000158;Rank=1 +##PAF tr|O53547|O53547_MYCTU 317 0 265 - NC_000962.3 699930 290685 291450 294 819 0 AS:i:304 ms:i:289 np:i:130 fs:i:0 st:i:0 da:i:48 do:i:18 cg:Z:54M3I1M3I16M3D11M2I8M1I46M4I7M4I52M1D16M1I7M4D29M cs:Z:*ttcM*tctK*gtcL*gggT*gcgE*gacS*gatN*tccR*acaS:1*ccgR*gccT*gacT*tggN*gagT*aagT*ccgD:1*gacS:4*attV:5*cgcA:1*atcL:1*gcaR*accA*atcE:1*gagL*gtgG*ttcL:2*gacL:2*cacT:2*gccV*atcN:2*gagA:1+ALD:1+SDV*gccV*gagD*aacE*ctgI*gccG*gaaA*accA:1*agcA*aagD*gtgA:1*ggcA*accK:1*ctgV-tggctcgac*gtcA*accV:1*gacG:1*gccI*gtcS*gacQ*aagR*atcA*agcT+AD:1*cacL:1*cgcA*gacS*cacA*cacV:1+L:1*aagG*gccL:2*ctgV:9*aagR*ctgM:1*gccF:2*gacS:1*gcgE*cgtE:4*ctgI:2*aatH:1*cttR*gccG*ccgH*ttgF*cggL:2*gagR*ggtN*ctgA*gtgA*ggcA+YWRD*aacK*ggcA*agcK*atcD*ggaA:2+GSVF:2*gtgL*atcV*gggN*ctgT:2*atcE:2*atcL*gccV:1*aacP*cgcV:2*accA:3*accA*accA:3*atgI*atcT*ggcA*atcL:1*cagL*gcgS*ctgA:1*cccR*ggcA:1*gccG*gcgR*aaaY:1*atcV*acgC*atcA:1*gccV*gtgI*gcaC:1*ggaR-ttc*atcA*gaaR:1*cagA:3*gccD*atcV*ccgF*ctgG:1*accA*cgtP*gagD:1+E*ggcA*cgcG*cggQ*ctgI*aacD*tcgP:1-ctgcagggcggg*cagS:1*gtcQ*gacH:1*gccV*gagS*gccL*atcV*gccQ*tacF*ttcL:4*tcaA*aacA*gcgE:1*accN:1*aacQ:1*attF*cgtI:1*tgcY:1 +NC_000962.3 miniprot mRNA 290686 291450 289 - . ID=MP000159;Rank=1;Identity=0.3590;Positive=0.4762;Target=tr|O53547|O53547_MYCTU 1 265 +NC_000962.3 miniprot CDS 290686 291450 289 - 0 Parent=MP000159;Rank=1;Identity=0.3590;Target=tr|O53547|O53547_MYCTU 1 265 +##PAF tr|O53639|O53639_MYCTU 582 0 582 - NC_000962.3 699930 142130 143876 1746 1746 0 AS:i:2975 ms:i:2975 np:i:582 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:582M cs:Z::582 +NC_000962.3 miniprot mRNA 142128 143876 2975 - . ID=MP000160;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53639|O53639_MYCTU 1 582 +NC_000962.3 miniprot CDS 142128 143876 2975 - 0 Parent=MP000160;Rank=1;Identity=1.0000;Target=tr|O53639|O53639_MYCTU 1 582 +NC_000962.3 miniprot stop_codon 142128 142130 0 - 0 Parent=MP000160;Rank=1 +##PAF tr|P95073|P95073_MYCTU 301 0 217 + NC_000962.3 699930 171250 171899 369 652 0 AS:i:531 ms:i:531 np:i:139 fs:i:1 st:i:0 da:i:-1 do:i:3 cg:Z:50M1I142M1F24M cs:Z:*tcgM*cgaP:1*accA*gctH*ggcD:1*accN:1*gcgD*atcL*accA*gaaS:6*ttgT*gggM:3*gcaG:2*gtgL*gaaA:1*gccK*gcgD*accP*aatR*ccgG:2*cgtN:1*gagP:2*aagE*gtgP:2*tcgR*tcgA*gcgV:1+L*accD*gccF*tggF*gcaT*cggK:1*gccI:1*gccG*gatE:1*gccD*tggI*ctcA*gacT*ggtT*gatG*cagN:1*ggcS*cgaP*cgcG*gtgR*catA*cggQ*gttA*gccM*tgcI:1*tacG*cagI:4*cacK*ttcY:2*gagD:2*ggtR*gccT:1*gtcT:1*gcaG:19*aacP:13*tcgQ:1*ttgI*gagD*tacF:1*gcgT*gggT*attT:1*caaA*tcgG*catI:2*gttK:3*agaI:1*catR*gccT:1*gcgY*gtgI:3*gacA:6*ataQ:3*ttcL:1*ggcS:1*caaA:8*ttgM:1*cccI:3*ggcP:1-g:4*tatC:2*tggT*tcaA:1*cgcN:1*gcgV*cacL:6*tcgP*aggN:2 +NC_000962.3 miniprot mRNA 171251 171899 531 + . ID=MP000161;Rank=1;Identity=0.5660;Positive=0.6396;Frameshift=1;Target=tr|P95073|P95073_MYCTU 1 217 +NC_000962.3 miniprot CDS 171251 171899 531 + 0 Parent=MP000161;Rank=1;Identity=0.5660;Frameshift=1;Target=tr|P95073|P95073_MYCTU 1 217 +##PAF tr|P95206|P95206_MYCTU 213 0 213 - NC_000962.3 699930 476681 477320 639 639 0 AS:i:1104 ms:i:1104 np:i:213 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:213M cs:Z::213 +NC_000962.3 miniprot mRNA 476679 477320 1104 - . ID=MP000162;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95206|P95206_MYCTU 1 213 +NC_000962.3 miniprot CDS 476679 477320 1104 - 0 Parent=MP000162;Rank=1;Identity=1.0000;Target=tr|P95206|P95206_MYCTU 1 213 +NC_000962.3 miniprot stop_codon 476679 476681 0 - 0 Parent=MP000162;Rank=1 +##PAF tr|P95210|P95210_MYCTU 123 0 123 + NC_000962.3 699930 479788 480157 369 369 0 AS:i:620 ms:i:620 np:i:123 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:123M cs:Z::123 +NC_000962.3 miniprot mRNA 479789 480160 620 + . ID=MP000163;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95210|P95210_MYCTU 1 123 +NC_000962.3 miniprot CDS 479789 480160 620 + 0 Parent=MP000163;Rank=1;Identity=1.0000;Target=tr|P95210|P95210_MYCTU 1 123 +NC_000962.3 miniprot stop_codon 480158 480160 0 + 0 Parent=MP000163;Rank=1 +##PAF tr|P96808|P96808_MYCTU 447 0 447 - NC_000962.3 699930 158317 159658 1341 1341 0 AS:i:2336 ms:i:2336 np:i:447 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:447M cs:Z::447 +NC_000962.3 miniprot mRNA 158315 159658 2336 - . ID=MP000164;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96808|P96808_MYCTU 1 447 +NC_000962.3 miniprot CDS 158315 159658 2336 - 0 Parent=MP000164;Rank=1;Identity=1.0000;Target=tr|P96808|P96808_MYCTU 1 447 +NC_000962.3 miniprot stop_codon 158315 158317 0 - 0 Parent=MP000164;Rank=1 +##PAF sp|P9WF85|VPC25_MYCTU 142 0 142 - NC_000962.3 699930 332710 333136 426 426 0 AS:i:753 ms:i:753 np:i:142 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:142M cs:Z::142 +NC_000962.3 miniprot mRNA 332708 333136 753 - . ID=MP000165;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WF85|VPC25_MYCTU 1 142 +NC_000962.3 miniprot CDS 332708 333136 753 - 0 Parent=MP000165;Rank=1;Identity=1.0000;Target=sp|P9WF85|VPC25_MYCTU 1 142 +NC_000962.3 miniprot stop_codon 332708 332710 0 - 0 Parent=MP000165;Rank=1 +##PAF sp|P9WFI9|Y293_MYCTU 302 0 302 + NC_000962.3 699930 340997 341903 903 906 0 AS:i:1570 ms:i:1570 np:i:302 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:302M cs:Z:*gtgM:301 +NC_000962.3 miniprot mRNA 340998 341906 1570 + . ID=MP000166;Rank=1;Identity=0.9967;Positive=1.0000;Target=sp|P9WFI9|Y293_MYCTU 1 302 +NC_000962.3 miniprot CDS 340998 341906 1570 + 0 Parent=MP000166;Rank=1;Identity=0.9967;Target=sp|P9WFI9|Y293_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 341904 341906 0 + 0 Parent=MP000166;Rank=1 +##PAF sp|P9WFJ1|Y153_MYCTU 311 0 311 + NC_000962.3 699930 171232 172165 930 933 0 AS:i:1600 ms:i:1600 np:i:311 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:311M cs:Z:*gtgM:310 +NC_000962.3 miniprot mRNA 171233 172168 1600 + . ID=MP000167;Rank=1;Identity=0.9968;Positive=1.0000;Target=sp|P9WFJ1|Y153_MYCTU 1 311 +NC_000962.3 miniprot CDS 171233 172168 1600 + 0 Parent=MP000167;Rank=1;Identity=0.9968;Target=sp|P9WFJ1|Y153_MYCTU 1 311 +NC_000962.3 miniprot stop_codon 172166 172168 0 + 0 Parent=MP000167;Rank=1 +##PAF sp|P9WMG5|MCE2R_MYCTU 240 0 240 + NC_000962.3 699930 684409 685129 720 720 0 AS:i:1190 ms:i:1190 np:i:240 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:240M cs:Z::240 +NC_000962.3 miniprot mRNA 684410 685132 1190 + . ID=MP000168;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMG5|MCE2R_MYCTU 1 240 +NC_000962.3 miniprot CDS 684410 685132 1190 + 0 Parent=MP000168;Rank=1;Identity=1.0000;Target=sp|P9WMG5|MCE2R_MYCTU 1 240 +NC_000962.3 miniprot stop_codon 685130 685132 0 + 0 Parent=MP000168;Rank=1 +##PAF tr|Q11064|Q11064_MYCTU 383 23 368 + NC_000962.3 699930 273165 274164 378 1092 0 AS:i:412 ms:i:412 np:i:181 fs:i:0 st:i:0 da:i:111 do:i:111 cg:Z:23M1I71M6I11M1D8M4I32M6I23M7I7M6D21M6I7M12D82M1I29M cs:Z:*gccS*gtcL*gagT:1*atgI:2*tgcV:2*gtcL*ggcL:2*gtcG:2*gtcA:1*ttcY*cagT:2+K*cacY*tctT*agcH:1*gtgY*ggcW:1*cggL*ctgM*ttcS*ggcS:1*ttcM*gatE*ctgI*gcgG:1*gcgP*gtgI:2*gccV*gtgL:5*tggF:1*ggaP*cacW*gccV*gcaK*gcgS:1*cgaA*gatT*ctgG*cggG*tcaP*cacP:1*cgaS*accL*ggtS*ccgR:1*ctgA*cgaW*tcgH:2*gcgR:6*gtgT:1*gcgT:1*gtcL*gtcL*atcA*ctgY*tccL*ctgV*ctgY+HFRTAG:1*gacN*gcgP*gatG:1*gccT*agcW*ctgV*accG*gtgL*tggF-ctg*gccR:7+YTDG:1*gtgL*ccgG*ctgA*accF:1*accH*ggcQ:8*tccA:6*gcgL:3*gtcA:2*ttgY:1+LLVLVC*ggcR:2*attW*ccgQ*gtcP*ggtR*gccL*cgaL*gtgL*ccgA*gcgT*atcM:1*gcgG:1*gcgT*gcgM*ctcI:1*tggP:2+LILVHNT*ggcH:1*ctcM:1*ttgD*gacG:1-gggtcggggatcaacccg*ttgR*accL:1*ccgL:1*gcgT*ttcY*ttcL*tcgA:2*gccV*gcgG:2*ttgM:2*gagV*tggL:1+AMGVRC:1*agcA*ccgF:1*gggA*ttgI:1-catcggtgggcgcgccgccgcgtggcgatggcggtt*accL:1*ctgV*ctgI*ggtC:1*ctgF*gtgI*gcgV*gccS*tcgT:1*ttgI:2*ccgA*gagP*ggcT*ctgT*gttS:1*ggcT*acgA*gcgL:1*caaE*ttcA*gcgL:4*atgF*ggcY*tcgA*ctgV*gtaI:1*ttcV*gcgL*ctgA:4*gtgA:1*gacG*cggD*cccQ*gacG*acgW*tcgY*cacA*cggQ:2*ggcA:1*cccR*gcgP:2*accF:2*cgtE*tggI:2*ggcE*ctgI:1*atcL*tggI:2*gccV*gcgT*ctgM*gccE*atgI+A*gtgM*tttV*cccD:1*atcL:1*gcgY*ttcR*ccgV*tttY:1*gggS*cgaS:1*ccgV*acgN*gtgL*ctgC*gtgL*ttgV:2*atcV*ttcL*ggtT*ttcI*gcgP*atcL:1 +NC_000962.3 miniprot mRNA 273166 274164 412 + . ID=MP000169;Rank=1;Identity=0.3462;Positive=0.4973;Target=tr|Q11064|Q11064_MYCTU 24 368 +NC_000962.3 miniprot CDS 273166 274164 412 + 0 Parent=MP000169;Rank=1;Identity=0.3462;Target=tr|Q11064|Q11064_MYCTU 24 368 +##PAF tr|Q6MWX5|Q6MWX5_MYCTU 731 0 731 + NC_000962.3 699930 149532 363055 1341 2724 0 AS:i:1748 ms:i:1791 np:i:499 fs:i:0 st:i:0 da:i:0 do:i:51 cg:Z:93M1I29M1D19M1I79M20D40M1I1M1I17M1I21M1I13M7I2M2I14M1I19M8I24M4I22M3I16M210895N12D17M2D22M19D30M21D3M9D7M5D14M4D3M1D18M15D18M3D6M11D28M23D16M6D26M6D2M1I16M3D35M15D20M1D9M cs:Z::4*agcI*gtaA*gccN:2*attM*gtgL*gtgA:9*ggaR:6*aatT:7*accI*gccQ:1*ctgA:8*gcgL:2*gcgS:3*tccG*ggcQ:12*gcgT*gcgI:2*cagD:4*acgA:1*gccT*ggtS:1*gctG*ggaN*gcaL:5*gccS*cagH+T:3*cagM*ctgV:1*gccN:7*gcgT:1*ctgF:6*aacD:2*gatN:1*gcgT-ccg*gggA*actE*gggN*cagP*gccD:1*gggQ*gctN:2*atcL:1*tacF:6+F*ggcT*tccQ*gggT*gcgT:2*cagV:3*gccN:2*ccgS:5*catN:2*tccA:2*gccG:2*tccA:5*gccL:2*cacN:4*tggY:4*gtcA:2*tccI:4*gtcT:1*gcaT:1*gtgG*gctH:2*cacA:5*gccR:1*gggW:3*gccT:2*ggcA-ggtggcaatggcgggaacggcgccgatgccaacatcgtcagcggtggagacggtggcctc:5*ggtD:4*tacF:7*cacT:2*caaN:1*gcaG*atcS:1*ctcF*ggcN*ggcS*ggcL*gccT*ggcS*ggcS*gacV:2*cagA:3+G:1+H*cgcA:2*tggF:1*actA:2*gccT:2*cacT:2*caaI:2+Q*ggtN:1*gggE*ggcT*ccaG:1*ctgA*cccA*ggtS*cagN*gcaG:1*atgA:1*gccG:3*gccG:2+Y:1*atcV:1*aacD:5*gacT:2*gtcA+GGKNSSG:2+TL*tccT:2*gtcT*gccG:1*gtaT:5*aacA:1+G*atgW:1*atcY:1*cacS:8*gacA*agcG*agtG*ttcL*gctN:1+AGGATGGT:1*gcgG*gccT:5*gccS:1*gggA*cacW:1*ttcY:4*tccA*ggcA:1*cacA:2+NGGN*gccN*gtcT*acgS:2*aacT*accG:1*atcV:1*ggcA*gccS:2*gtcT:2*gacN:1*aggG:2+GAG:10*gacN*cgcQ*gccT:1*gccG*ttgV~gt210895ag-gccggcggcgacggtgggctgttgttcggcaacggc:4*tccA:1*gcaG*cccN:1*cagG:6*gcgQ-gccggg*ttcL*ttcY:4*aacD:2*gacN:4*gcgG*aacA*ggcN*ggcI:3*accN-gccggctggttcttcggcttcggcggcaacggcggggccggcgggatcggtgttgcc:1*atcS*aacD:2*ctcA*ggcA:1*gccH:2*gacA:2*aacS:1*gggR*ttcL*ttcI:1*aacA:2*aacH:2*atgD:3-ggggcggccggcgtgaacgccgtcaatcccggcctggccaccccggtcaccccggcggccaac:3-ggcctcaacctcgtcggcgttcccggc:3*ggcR*ggcR:2-ggcgccaacggcagt:2*ggcA*cagG*gcgT:2*gctD:2*gacN:3-gcctccacgagt:2*atcL-ggg*atcL*gcgS*caaG*accN*gggA:4*gctH:5*gacS*ggcS*gcaT-cccggtggcaacggcggcaatggtggcagcgtcgagcacactggc:2*ggcT*tccT*tctT*gcgG*agcT*ggcP*ggcP*aatT:8-gtcggtgcg*cccN:5-aacggcggccacgtcagcggcggatcggtcaac:3*gccF*ggtT:1*aaaS:2*aacI:2*accN:5*ccgT:2*cacN*ggcA:1*agcV*gttA:2-ggcccggttggcgacagtggcaacggtggtgccggcggggacggcggggccggggttagcgccaccgat*atcV*gccG*ggcS:3*cgcL:5*catS:3-tggatcggcaacggcggc*gacG:2*gcgG:1*ggtS*gtcL*ggcF:1*gtcN:4*gcgG*gctV:2*atcT:2*cacN:2*gatS:1-ggctccgtaaatacccct:2+P*ggcA:1*gagV*gccG:1*gacN:5*ctgV:1*gggA*gacA:1-ggtgggcgc:1*ataL*ttcA:2*tttI:1*gccN:2*gccS:2*gccS:2*gtcA:2*gccN:2*gctT:1*gggD:1*ggcA:1*ggcN:6-attttcaatgccggtacccccggcgccgccggcacgggcggtgac:1*ggtA:3*accN*ggtA*gcgQ*gccL*ggcI:1*aaaN:2*gccN:2*agcG:2-gtc:2*gccG:5*gccT +NC_000962.3 miniprot mRNA 149533 363055 1791 + . ID=MP000170;Rank=1;Identity=0.4923;Positive=0.5496;Target=tr|Q6MWX5|Q6MWX5_MYCTU 1 731 +NC_000962.3 miniprot CDS 149533 150822 1178 + 0 Parent=MP000170;Rank=1;Identity=0.5770;Target=tr|Q6MWX5|Q6MWX5_MYCTU 1 440 +NC_000962.3 miniprot CDS 361718 363055 613 + 0 Parent=MP000170;Rank=1;Identity=0.4049;Target=tr|Q6MWX5|Q6MWX5_MYCTU 441 731 +##PAF tr|I6X8G2|I6X8G2_MYCTU 68 0 68 - NC_000962.3 699930 87800 88004 201 204 0 AS:i:337 ms:i:337 np:i:68 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:68M cs:Z:*gtgM:67 +NC_000962.3 miniprot mRNA 87798 88004 337 - . ID=MP000171;Rank=1;Identity=0.9853;Positive=1.0000;Target=tr|I6X8G2|I6X8G2_MYCTU 1 68 +NC_000962.3 miniprot CDS 87798 88004 337 - 0 Parent=MP000171;Rank=1;Identity=0.9853;Target=tr|I6X8G2|I6X8G2_MYCTU 1 68 +NC_000962.3 miniprot stop_codon 87798 87800 0 - 0 Parent=MP000171;Rank=1 +##PAF tr|L0T643|L0T643_MYCTU 223 0 223 - NC_000962.3 699930 390582 391251 669 669 0 AS:i:1162 ms:i:1162 np:i:223 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:223M cs:Z::223 +NC_000962.3 miniprot mRNA 390580 391251 1162 - . ID=MP000172;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L0T643|L0T643_MYCTU 1 223 +NC_000962.3 miniprot CDS 390580 391251 1162 - 0 Parent=MP000172;Rank=1;Identity=1.0000;Target=tr|L0T643|L0T643_MYCTU 1 223 +NC_000962.3 miniprot stop_codon 390580 390582 0 - 0 Parent=MP000172;Rank=1 +##PAF tr|O07241|O07241_MYCTU 220 0 220 - NC_000962.3 699930 382881 383541 660 660 0 AS:i:1141 ms:i:1141 np:i:220 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:220M cs:Z::220 +NC_000962.3 miniprot mRNA 382879 383541 1141 - . ID=MP000173;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07241|O07241_MYCTU 1 220 +NC_000962.3 miniprot CDS 382879 383541 1141 - 0 Parent=MP000173;Rank=1;Identity=1.0000;Target=tr|O07241|O07241_MYCTU 1 220 +NC_000962.3 miniprot stop_codon 382879 382881 0 - 0 Parent=MP000173;Rank=1 +##PAF tr|O07246|O07246_MYCTU 220 0 220 + NC_000962.3 699930 387887 388547 657 660 0 AS:i:1131 ms:i:1131 np:i:220 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:220M cs:Z:*gtgM:219 +NC_000962.3 miniprot mRNA 387888 388550 1131 + . ID=MP000174;Rank=1;Identity=0.9955;Positive=1.0000;Target=tr|O07246|O07246_MYCTU 1 220 +NC_000962.3 miniprot CDS 387888 388550 1131 + 0 Parent=MP000174;Rank=1;Identity=0.9955;Target=tr|O07246|O07246_MYCTU 1 220 +NC_000962.3 miniprot stop_codon 388548 388550 0 + 0 Parent=MP000174;Rank=1 +##PAF tr|O07253|O07253_MYCTU 208 0 208 - NC_000962.3 699930 394696 395320 624 624 0 AS:i:1080 ms:i:1080 np:i:208 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:208M cs:Z::208 +NC_000962.3 miniprot mRNA 394694 395320 1080 - . ID=MP000175;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07253|O07253_MYCTU 1 208 +NC_000962.3 miniprot CDS 394694 395320 1080 - 0 Parent=MP000175;Rank=1;Identity=1.0000;Target=tr|O07253|O07253_MYCTU 1 208 +NC_000962.3 miniprot stop_codon 394694 394696 0 - 0 Parent=MP000175;Rank=1 +##PAF tr|O07424|O07424_MYCTU 452 0 452 - NC_000962.3 699930 210894 212250 1356 1356 0 AS:i:2253 ms:i:2253 np:i:452 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:452M cs:Z::452 +NC_000962.3 miniprot mRNA 210892 212250 2253 - . ID=MP000176;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07424|O07424_MYCTU 1 452 +NC_000962.3 miniprot CDS 210892 212250 2253 - 0 Parent=MP000176;Rank=1;Identity=1.0000;Target=tr|O07424|O07424_MYCTU 1 452 +NC_000962.3 miniprot stop_codon 210892 210894 0 - 0 Parent=MP000176;Rank=1 +##PAF tr|O33360|O33360_MYCTU 503 0 503 + NC_000962.3 699930 606550 608059 1509 1509 0 AS:i:2661 ms:i:2661 np:i:503 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:503M cs:Z::503 +NC_000962.3 miniprot mRNA 606551 608062 2661 + . ID=MP000177;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot CDS 606551 608062 2661 + 0 Parent=MP000177;Rank=1;Identity=1.0000;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 608060 608062 0 + 0 Parent=MP000177;Rank=1 +##PAF tr|O33360|O33360_MYCTU 503 0 503 + NC_000962.3 699930 400191 401700 1506 1509 0 AS:i:2651 ms:i:2651 np:i:502 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:503M cs:Z::495*cccH:7 +NC_000962.3 miniprot mRNA 400192 401703 2651 + . ID=MP000178;Rank=2;Identity=0.9980;Positive=0.9980;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot CDS 400192 401703 2651 + 0 Parent=MP000178;Rank=2;Identity=0.9980;Target=tr|O33360|O33360_MYCTU 1 503 +NC_000962.3 miniprot stop_codon 401701 401703 0 + 0 Parent=MP000178;Rank=2 +##PAF tr|O53546|O53546_MYCTU 254 0 254 + NC_000962.3 699930 196890 197652 492 762 0 AS:i:836 ms:i:836 np:i:198 fs:i:0 st:i:0 da:i:-1 do:i:3 cg:Z:254M cs:Z:*gtcM*cgcI*gacQ:2*caaA*accV:1*ctgA*accR*ctcA:5*cgcE:1*tgtS*gtgM*ctgD:1*ggaA*aagR:1*ctgA:2*tggR:3*tggF:3*attL*ctgD:1*tgcT:1*ttcM*atcV*atgA:2*ggaS*tttL*ttaV:2*atcL*atgL:4*ctgF:3*ttgV*atcA:7*gccR*cagE*ttcI:4*atcL:2*tccA:1*gcgT:1*atcF:1*gcgT*gtcI:5*ctgV*acaV:9*tccA:19*gagR:7*cacQ:10*atgT:3*acgL:6*atcC*accA*gtcI:2*gtcS:2*tttY*ctcA:1*ggtS:1*tatF:2*aacG:1*tcgN*ggcP:2*tacF*cttI*gccN*acgG:2*ttgV*atcL:3*cccR:1*gtgL*gtcI*atcL:1*accE:3*gcaL*acgL:2*ctgV*atcM:12*cgtK:2*tccP:2*cttV:1*accN:7*ctgY*tgtA*gtgF:1*gccC:2*gccV*gtcI:2*atcV*ttgM:1*accA:4*ttcI*gggS*acgA*gggQ +NC_000962.3 miniprot mRNA 196891 197652 836 + . ID=MP000179;Rank=1;Identity=0.6457;Positive=0.7795;Target=tr|O53546|O53546_MYCTU 1 254 +NC_000962.3 miniprot CDS 196891 197652 836 + 0 Parent=MP000179;Rank=1;Identity=0.6457;Target=tr|O53546|O53546_MYCTU 1 254 +##PAF tr|O53708|O53708_MYCTU 799 0 799 - NC_000962.3 699930 449406 451803 2397 2397 0 AS:i:4180 ms:i:4180 np:i:799 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:799M cs:Z::799 +NC_000962.3 miniprot mRNA 449404 451803 4180 - . ID=MP000180;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53708|O53708_MYCTU 1 799 +NC_000962.3 miniprot CDS 449404 451803 4180 - 0 Parent=MP000180;Rank=1;Identity=1.0000;Target=tr|O53708|O53708_MYCTU 1 799 +NC_000962.3 miniprot stop_codon 449404 449406 0 - 0 Parent=MP000180;Rank=1 +##PAF tr|O53737|O53737_MYCTU 236 0 236 + NC_000962.3 699930 542141 542849 705 708 0 AS:i:1185 ms:i:1185 np:i:236 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:236M cs:Z:*gtgM:235 +NC_000962.3 miniprot mRNA 542142 542852 1185 + . ID=MP000181;Rank=1;Identity=0.9958;Positive=1.0000;Target=tr|O53737|O53737_MYCTU 1 236 +NC_000962.3 miniprot CDS 542142 542852 1185 + 0 Parent=MP000181;Rank=1;Identity=0.9958;Target=tr|O53737|O53737_MYCTU 1 236 +NC_000962.3 miniprot stop_codon 542850 542852 0 + 0 Parent=MP000181;Rank=1 +##PAF tr|O53903|O53903_MYCTU 584 0 584 + NC_000962.3 699930 483967 485725 777 1773 0 AS:i:1207 ms:i:1207 np:i:353 fs:i:0 st:i:0 da:i:-1 do:i:6 cg:Z:64M3D87M5I211M2D14M1D47M1D156M cs:Z:*ccaM*ctcV*ccaA*atgS:1*gttI*ataP*tccT*acgA:2*gacE:2*accS*acgV*actH:1*agcN*gacG*gaaA:1*tttI*gtgT*ttcY*atgI:2*gacE*acaQ*aaaD*accW*ggcA*gacG*caaV*attA*gacE*cgaT*atgL:6*tctR:1*gtcM*accL*gccN:1*tctA*gcgE*tatP:1*ataR*agtH*tatV:1*cggA*catT*gctG:2-cgaaggacc:1*gcgV:1*tcaL:4*ctgI*gacE:2*gcaV:6*tgcQ:2*tggR*acgI*ccgA:4*gaaV:1*ctgH*ggcA*agcG*ctaA*cgcH:1*aagE:2*ggaI*ctgS*gctV*gtaL*ctcS:1*tgtT*gccS*gccP*gacA:1*gtgI:4*caaG:1*gaaV*acgD*cggD:2*gccE*acgC*ataA*gctQ*acaP*catQ*gggP*gcgG*tctQ*gtaS*actA*acgP*ccgS*gtcI*ataV*gcgE:2*acaL:2*gagL*ccaD:1+RQRSR*ggaS*gatP*aacG*tgtA*gatR*ctcP*gatT*tctG*caaR*ctaD*tcaT*gacP*tggE*agtT*tcgA:9*gccR*aacT:1*cgtA:2*gttM*ttaV:1*atgN*cgtK:2*acgF*gaaA:1*gtcF*gacE:2*atcV*cgtA*aacD*tatF:1*cgcA*catP:3*gcgV*ccgV*aggP*ttgP*cccD*agcL*tcgT:13*atgL*gttL:1*ctcA*tttI*attM:1*ttgI*tttL*gtcA:1*tgtV:1*gttT*atcV:4*gagV*gcaG:1*atcL*cgtQ*aagR:4*atgI:4*aaaR*cacN*cagG*gcgR*ccaT*tttI:2*gcgG:5*gatE:3*gctR:3*gaaD*gagD:2*gcgD:4*ggcA*cacG:1*aatH:2*atcL:2*gcgS:1*cagR:1*cagH:1*aatA:1*ataL*accK*aaaR:1*ctcA*cgcE:2*cgtG*cccR*tacF:1*ttgF*atgA*cccA:2*gtcL*aagR:1*tcaA:6*gtgT:2*ctgI:2*acgR*aagN*gcgV*ggaN*tcaE:2*acgE*tcaI*accV*gagD:1*gatE*gctS*gatE*agcK:1*gctP*cgaA:1*cacQ:1-gagcta*agtI*actR*ttcC*gaaP*actS*gagG*cgtS*gcaG:1*cgtP:1*ataV*cgcS:1-cac*agcG*gacV*gacP*aagR*gaaS*ccgQ:1*cttV:6*tcgT*aatC:2*ctcC*ggaP*ccgQ:1*cgtS*atcV:4*attV*cacQ:1*aagG:2*tctA*accS:2*cacW*aatH*gcaK*gacP*gacE*gcgE*ctcS*aatK:1-gat*aagT:1*cagG:1*agcR:1*cggV*gagT*gccP:5*aggE*tcgA:7*ttgS:2*ataV*gtaS:1*gatG:1*ttcL*tacF:1*gtcI:2*atgI:3*attL:1*caaV*gacY:1*gtaR:2*tatA:5*actA:1*gtcI*aagQ:1*tttI:1*ggtS:2*gtcC:2*tttI*tcaA:1*tccP:1*gacH:1*gtgT:1*catK:2*attA*gcgI*gccI:1*gtaL*aggK*actK*gagR*catG*gggD*cccS:1*aaaE*gtgD*actV*attA*atgD*gatR*ttcL*tcgR*acgI*atcV:2*ctgD:1*gtaA*tcgA:1*ttgI*tcgF*aaaD*ttaS:3*catS:1*acaA:1*tttL*cttV:2*ccgS:2*gcgS*ctaI:1*aagI:6*agcR:2*gcaQ:1*gcaV*aagQ*cagL:1*ggaR*gcaR*aatR*aagE*ttgF*caaT:1*gtaL*gcaD*acgA +NC_000962.3 miniprot mRNA 483968 485725 1207 + . ID=MP000182;Rank=1;Identity=0.4382;Positive=0.5973;Target=tr|O53903|O53903_MYCTU 1 584 +NC_000962.3 miniprot CDS 483968 485725 1207 + 0 Parent=MP000182;Rank=1;Identity=0.4382;Target=tr|O53903|O53903_MYCTU 1 584 +##PAF sp|P71650|MAZF9_MYCTU 118 1 116 - NC_000962.3 699930 547037 547357 228 345 0 AS:i:311 ms:i:311 np:i:87 fs:i:2 st:i:0 da:i:0 do:i:0 cg:Z:57M1G30M7I1M1G18M cs:Z::1*ctgR:15*gcgE:2*atgN*cggQ:4*attV:8*gccT:1*ataT:2*gacG:3*gtgI*ccgT:7*accI*gaaA:2*cY:6*ccgS:1*gcgT*agcT*ggtT:2*gccQ:2*tcgC:4*cagE:1*gttI*ggaR:1*gtcI:1*gcgT*caaE+RLLRPIG:1*cV:1*cctA:3*atcA*gaaQ:2*gatE:2*agaK:3*gcgD:1 +NC_000962.3 miniprot mRNA 547038 547357 311 - . ID=MP000183;Rank=1;Identity=0.6609;Positive=0.7565;Frameshift=2;Target=sp|P71650|MAZF9_MYCTU 2 116 +NC_000962.3 miniprot CDS 547038 547357 311 - 0 Parent=MP000183;Rank=1;Identity=0.6609;Frameshift=2;Target=sp|P71650|MAZF9_MYCTU 2 116 +##PAF sp|P71707|PBP1A_MYCTU 820 0 820 + NC_000962.3 699930 53236 55696 2457 2460 0 AS:i:4284 ms:i:4284 np:i:820 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:820M cs:Z:*gtgM:819 +NC_000962.3 miniprot mRNA 53237 55699 4284 + . ID=MP000184;Rank=1;Identity=0.9988;Positive=1.0000;Target=sp|P71707|PBP1A_MYCTU 1 820 +NC_000962.3 miniprot CDS 53237 55699 4284 + 0 Parent=MP000184;Rank=1;Identity=0.9988;Target=sp|P71707|PBP1A_MYCTU 1 820 +NC_000962.3 miniprot stop_codon 55697 55699 0 + 0 Parent=MP000184;Rank=1 +##PAF tr|P95208|P95208_MYCTU 395 0 395 - NC_000962.3 699930 478568 479753 1185 1185 0 AS:i:2057 ms:i:2057 np:i:395 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:395M cs:Z::395 +NC_000962.3 miniprot mRNA 478566 479753 2057 - . ID=MP000185;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95208|P95208_MYCTU 1 395 +NC_000962.3 miniprot CDS 478566 479753 2057 - 0 Parent=MP000185;Rank=1;Identity=1.0000;Target=tr|P95208|P95208_MYCTU 1 395 +NC_000962.3 miniprot stop_codon 478566 478568 0 - 0 Parent=MP000185;Rank=1 +##PAF sp|P9WGD5|SSB_MYCTU 164 0 164 + NC_000962.3 699930 58585 59077 489 492 0 AS:i:843 ms:i:843 np:i:164 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:164M cs:Z:*gtgM:163 +NC_000962.3 miniprot mRNA 58586 59080 843 + . ID=MP000186;Rank=1;Identity=0.9939;Positive=1.0000;Target=sp|P9WGD5|SSB_MYCTU 1 164 +NC_000962.3 miniprot CDS 58586 59080 843 + 0 Parent=MP000186;Rank=1;Identity=0.9939;Target=sp|P9WGD5|SSB_MYCTU 1 164 +NC_000962.3 miniprot stop_codon 59078 59080 0 + 0 Parent=MP000186;Rank=1 +##PAF sp|P9WI25|PPE19_MYCTU 396 0 396 - NC_000962.3 699930 466803 468004 474 1257 0 AS:i:513 ms:i:513 np:i:209 fs:i:1 st:i:0 da:i:-1 do:i:129 cg:Z:164M1G40M1I8M5I3M7I16M1I47M4D6M1I27M3D5M2D16M3D7M2I14M11D11M1I13M cs:Z:*gtcM*atgV:13*atcM:1*tccA:4*aggA*cccS:1*atgV*caaA:2*gcaK*gccM:1*caaD*cggS*ctgV:1*aacS*gaaD:1*accF*gcgS*acgA:1*gctS*tccA*tacF*tccQ:2*attV*tccW:3*ggcT*gatG*gacS:1*ctgI:1*ccgS:2*ctgG*tcgL:1*gcgV:3*gtcS:6*aggS*gccV:2*gccG*tcgQ:2*cagL*gccT:3*gccV*gtgR*gccV:2*aacA:3*tcgT:2*gcgG*gcgL:4*acgP:3*gccE:2*cgcA*acaE*atgL*ctgM*tcaI:1*gtcI*cagA:2*gttL*tttL:8*actV*agtN:1*acgA*cacE:6*catQ:1*atcA*ttgA:2*gacF:3*ggcA*gccT*tcgA*gggA*gccT:1*tccT*cagE*tA*tgcL*gccL*gttP*cacF*ccgE*ccaD*ccgA*gcgP*accL*accI*agcT*gggN*gccP:1*tcgG:1*agtL*gacE*gccQ:1*gcgV*acaA*gcgV*gctE*cagE:1*gtaI*gtaD*ccgT:3*gcgN*accQ*gacL*gtgM*agcN*ctgN*ctaV:1+Q*accA:2*tccQ*ttcL*ctaA*ccgQ:1+TKSIW:3+QLSELWK:2*ccgS*aacP*cccH*atcL*gagS*gatP:1*gacS*gttN*ctcI:1*gccS*gcaM*gctL+N*gtaN*gccH:1*gcgS*gctM*ggcT*agtN*ttgS:3*gcgM:1*cagS*ctcT*ggcL*gagH*atcS*tacM*cgcL*cacK*gacG*gtgF*gtcA*gacP*gagA:1*caaA*aagQ:1*ccgV*catE*tgcT*ccaA:1*gaaQ*tccN*gacG*cagV*acaQ*cccA*gctM*gggS*gccS*gcgL:1*gacS-ggggatctccct*gagQ*gtcL:1*ggaS*cggS*gtcL+G*accS:1*ccgG*ccaL*cagG*ccgA*ccgG:3*ctcN*accL:1*tacR*tccA:1*aacS*atcV:1*ggaS:4*cacQ*agcA:1-aatcttccg*ccaA:1*gtgA*cgcN:1-gttgcg:1*atgV*ttcT:1*ggcA:1*actR*ccgA*atgL*tatP*atgL:1*gggS*agtL*tcgT*gacS-ggctcctac:1*ggcA*ctgQ*gcaT:1*gcgP:1+HM:1*gccG:1*accL*ggtP:1*gccG*ggtQ:1*gccT*gccN*cgcS:2-tccgcgccgaccccggctgcagccgccccggcc:1*gccF:2*gccV*ggcS*ccgN:1*gccL*accR*aggM+P:1*gccR:1*cagY*cagV*acgM:1*gcgR:4*gccG +NC_000962.3 miniprot mRNA 466804 468004 513 - . ID=MP000187;Rank=1;Identity=0.3771;Positive=0.4988;Frameshift=1;Target=sp|P9WI25|PPE19_MYCTU 1 396 +NC_000962.3 miniprot CDS 466804 468004 513 - 0 Parent=MP000187;Rank=1;Identity=0.3771;Frameshift=1;Target=sp|P9WI25|PPE19_MYCTU 1 396 +##PAF sp|P9WIH1|PE15_MYCTU 102 0 97 + NC_000962.3 699930 349623 349914 198 291 0 AS:i:323 ms:i:323 np:i:77 fs:i:0 st:i:0 da:i:0 do:i:15 cg:Z:97M cs:Z::8*gggS:2*gcaG:4*gtgI:2*ctgV:9*agcA:3*gtgF:1*accA:2*gtgI:2*gcgG*gcgS:1*ccgS:2*ctgV*cagC*accN:1*gccV*gggE:2*gcaV*cagH:1*gtcS*gagQ:1*gcgV*gtcA*gtcM*accA:1*gaaQ:7*gccS:4*ggcA:6*ctgA:1*ggtR:2*gccL:3*acgS:1 +NC_000962.3 miniprot mRNA 349624 349914 323 + . ID=MP000188;Rank=1;Identity=0.6804;Positive=0.7938;Target=sp|P9WIH1|PE15_MYCTU 1 97 +NC_000962.3 miniprot CDS 349624 349914 323 + 0 Parent=MP000188;Rank=1;Identity=0.6804;Target=sp|P9WIH1|PE15_MYCTU 1 97 +##PAF sp|P9WJ41|VPB24_MYCTU 77 0 77 + NC_000962.3 699930 289103 289334 231 231 0 AS:i:407 ms:i:407 np:i:77 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:77M cs:Z::77 +NC_000962.3 miniprot mRNA 289104 289337 407 + . ID=MP000189;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJ41|VPB24_MYCTU 1 77 +NC_000962.3 miniprot CDS 289104 289337 407 + 0 Parent=MP000189;Rank=1;Identity=1.0000;Target=sp|P9WJ41|VPB24_MYCTU 1 77 +NC_000962.3 miniprot stop_codon 289335 289337 0 + 0 Parent=MP000189;Rank=1 +##PAF sp|P9WJC7|ESPG3_MYCTU 295 0 295 + NC_000962.3 699930 352148 353033 885 885 0 AS:i:1531 ms:i:1531 np:i:295 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:295M cs:Z::295 +NC_000962.3 miniprot mRNA 352149 353036 1531 + . ID=MP000190;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WJC7|ESPG3_MYCTU 1 295 +NC_000962.3 miniprot CDS 352149 353036 1531 + 0 Parent=MP000190;Rank=1;Identity=1.0000;Target=sp|P9WJC7|ESPG3_MYCTU 1 295 +NC_000962.3 miniprot stop_codon 353034 353036 0 + 0 Parent=MP000190;Rank=1 +##PAF sp|P9WNX9|GABD1_MYCTU 457 0 457 - NC_000962.3 699930 279607 280978 1368 1371 0 AS:i:2337 ms:i:2337 np:i:457 fs:i:0 st:i:0 da:i:162 do:i:0 cg:Z:457M cs:Z:*gtgM:456 +NC_000962.3 miniprot mRNA 279605 280978 2337 - . ID=MP000191;Rank=1;Identity=0.9978;Positive=1.0000;Target=sp|P9WNX9|GABD1_MYCTU 1 457 +NC_000962.3 miniprot CDS 279605 280978 2337 - 0 Parent=MP000191;Rank=1;Identity=0.9978;Target=sp|P9WNX9|GABD1_MYCTU 1 457 +NC_000962.3 miniprot stop_codon 279605 279607 0 - 0 Parent=MP000191;Rank=1 +##PAF tr|Q6MX48|Q6MX48_MYCTU 963 0 963 - NC_000962.3 699930 372822 375711 2889 2889 0 AS:i:5124 ms:i:5124 np:i:963 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:963M cs:Z::963 +NC_000962.3 miniprot mRNA 372820 375711 5124 - . ID=MP000192;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|Q6MX48|Q6MX48_MYCTU 1 963 +NC_000962.3 miniprot CDS 372820 375711 5124 - 0 Parent=MP000192;Rank=1;Identity=1.0000;Target=tr|Q6MX48|Q6MX48_MYCTU 1 963 +NC_000962.3 miniprot stop_codon 372820 372822 0 - 0 Parent=MP000192;Rank=1 +##PAF sp|Q79FB3|PG47_MYCTU 525 0 522 - NC_000962.3 699930 336562 339073 984 1617 0 AS:i:1447 ms:i:1505 np:i:369 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:97M3I51M1D90M4I26M1D16M1I11M2D29M4D27M1D26M933V2M1D14M3D24M3D20M1D26M1I25M2I4M1I21M cs:Z::9*gttF*atcL*gcgT:3*acgM:4*ctcI*gagG:1*agcT*atcV*gccS:2*aacS:3*gcgS:1*aacP:1*acaV:1*ctgI:9*acgI:7*gccM:9*gccV:2*cagS:3*gccQ:7*tccA:1*ggcA*ggcY*gcgS:2*gccS:5*accV*tcgT:1+LQQ:1*ctcV*gccD*ccgV:2*gagA*ttcP:1*ctgR*gcgS*aatA*accL:8*accA:2*gccK:4*gccQ*aatD:2*gacA:2*tggL:1*atcY:1*aacS:2*gccN:4*gcgL:2-gtc*aacS:1*gggQ*gccK:6*ggcA:2*atcF:9*gggA*aggS*gccN*agcQ*acgA:1*accN:5*gccN:3*gccG:1*atgL*ctgI*ttcW:1*gccT:2*gtcT:2*cccN:3*gcaT*gccT*gctF*ttcL*ggcD:1*accA:8*aacA:4*gccG*gacA:2*gtcA:2*gccV:3*accA*gacL*gccG:1+GAQA*accA:2*gccN:2*tccA:2*aacV:8*accA:2*cccA:3*ggcS-atc*tttD*ggcT:2*gccT:2*gatA:2*tctA:5+P*gccG:2*accS:2*agtV:2*acgF*agcG-ataatc*aacD*gtcT:2*aacT:2*gccD:2*gacS*gccG:1*atgL*ctcF*agcG*ctcV:1*gccG:3*gccH:2*agcF:1*ggaS*tccA-aacccggacggt*ggcA:2*gccD:2*atcA:2*gacA:3*ttgV:8*gtcA*tgcG:1*ctgV*ggcA-ttc*gacT*gccV*ggcA:1*gcgH:2*gccH:2*aagN:4*atcY:1*gcgT:8*ggF~gt930ag-c:2-acc:3*aacD:2*agcD:2*aacI*gccG:2*ctcV-gccctcggc*gccG:9*agcT*gccG*ttaT*aatL*gtcS:2*accR:2*gtcA:3-ggcggcagt*ggcA:1*tcgT*ctcF*ttcY:1*ttcS:5*accA:2*tccE:1*ggcD*atcN:1-agc*agcD:2*accN:2*gacV:2*acgK:2*gtgL*ttcV:1*aacE:2*gacN:2*gccD:2*tttA*ggcT+I:1*gacG*accK:2*aatS*tcgG*agcG*tcgN*gtcG*cccG:2*gtgW:1*atcT:1*aacQ:6*ggcA+AF:4+T:1*acaS*cccV:1*gccV:2*accA*agcG:2*atcL*atcE:1*gagQ:2*ctcE:3 +NC_000962.3 miniprot mRNA 336563 339073 1505 - . ID=MP000193;Rank=1;Identity=0.6085;Positive=0.6846;Target=sp|Q79FB3|PG47_MYCTU 1 522 +NC_000962.3 miniprot CDS 337926 339073 1159 - 0 Parent=MP000193;Rank=1;Identity=0.6292;Target=sp|Q79FB3|PG47_MYCTU 1 381 +NC_000962.3 miniprot CDS 336563 336995 346 - 1 Parent=MP000193;Rank=1;Identity=0.5541;Target=sp|Q79FB3|PG47_MYCTU 382 522 +##PAF tr|Q79FD4|Q79FD4_MYCTU 1660 0 1660 - NC_000962.3 699930 333546 339073 2472 5394 0 AS:i:2983 ms:i:3061 np:i:923 fs:i:1 st:i:0 da:i:0 do:i:42 cg:Z:91M3I31M1D15M3D31M5D25M6D27M4D29M24I28M1D44M1D12M4D13M2I12M7I11M6I38M5I13M7I10M1D50M4I7M1D15M9I12M1D12M6I28M2I17M2D19M1I17M1I49M12I19M1D7M1D7M1D48M11I21M4I14M12I11M1I20M585V3M1D15M1I5M2D10M1I19M3D19M2I15M1D52M2I89M3D12M2I9M9I18M10D12M1D12M8I29M4D13M3D10M4D11M1D8M15D31M3D16M1D13M7D9M4D25M6D15M1I14M1D15M1I7M9D44M3D25M6D10M7D27M7D27M2D6M5I19M1G7M1D35M cs:Z::2*tttY:3*gcgT:2*gttM*atcM:1*gcaT:2*acgF:3*agtR*ctcI*gagG:1*agcQ*atcV*gccS:2*aacS:1*gccV:2*gccM*aacP:2*gcaE*ctgV*ctgV:8*acgA*gcgG*gttI:4*ggcS:2*ggcA:1*gccE:8*cagA:3*gccD:3*cagH*gcgT:2*tccA*ggtA*ggcA*ggcR*gcgW:1*gccT:1*gccT:1+IAN:3*accM*tcgR*ccgV*ctgV:1*gccG*ccgA*atcV:1*gagA*ttcP*ttcT*ctgQ*gcgT*aatL*accL:6*aacD:1*accA*aacH:1*gccT-ccc*ggcA*accP:1*gccQ*aatP:2*gacA:2*tggL:1*atcF:2-ggcggcgcc:2*tccN:4*gtcA*aacV:1*gggQ*gccV:2*aacA:3*ggcA:2*atcF:1*aacI:7-gggagggccagcacg:1*accA:1*ggcA*gccP:2*gccT:2*gccT*gccG:1*atgW:1*ttcA:1*gccG*gccG:4*cccM:1-ggattcgcagccgctttc:2*accG:9*ggcA:3*gccG*gacN:2*gtcA:6-accgacgccggc*accG:5*tccA:3*ggcA:1*ctgW:2*gccH:2*accA:2*cccV:2*ttcV:1*atcA*tttA:1+ANGATPGQDGAAGVAGSDDGAGGD:1*ggcL:2*gggS:3*tctD:2*ctgA*ttcG:1*gccV:2*accN:2*agtR:2*acgW*agcL*ataL*atcG:1-gtc:2*aacA:2*gccV:2*gacV*gccG:1*atgA*ctcG*agcG*ctcA:8*agcA:1*ggaA*tccT*aacG*ccgI*gacN:1*ggcP*ggcA:1*gccI*ggtS*gggA*atcA:5*acgA-ttg*ttcG:1*tccN:5*gtcN*tgcG:1*ctgV-ggcttcgacgcc:8*aagS:4+GY*atcV:1*gcgR*ggcA:1*gccD:6+GGLGGAP*tccG*ttcD*gcgG:4*accN:2*gccS+WLAAGD:3*cccG:1*ctcH*gtcG:1*aacD*gccP:1*aacL:2*aacA:3*agcG*gcgG*aacA*ggcS*gccG:2*gccG*ggcA*ggcR:2*ggaA*agcN:1*gtgL*ctgA*atcA:2+DGPVS:5*agtK:2*actN:2*cccH:1+PVAGGHG:1*acgN*gccG:4*ttaN:2-cag:1*ctaV:1*cgaD*gacG:1*ttcA*aacG*gccG*cccH*gccG*agcG*acgD*ccaG*ctgA*cacA*accG*ctgA*cagG*caaY*caaA*atcD*ctcM*aacT:2*aacF*gagL*cccG*accS*caaS*gccG*ctcT*accP:1*cgaE*ccgD*ctgG*atcG*ggcN*aacG:2*aacG:1*actA*ccgG:1*accA:1+GAHA*gccG:6-tgg*ttgA*ttcG:4*aacA:2*cacA:1*gcgG*accN:2+HGFNAVLVS:3*gacN:2*tccD:5-atc*ctgR*tcaG:1*attD:2*accA:2*tccA:2+DAPAGR*atcA:1*acgS*acgQ:1*caaV:2*accD:2*accA:3*gccG*ttgG*ctgA*atcP:1*tccN:2*accS:2*agcR:1+DM*gggA:1*ggcK*ctgD*gacG*accD:5*cgcD:3*gccP:1-ttgttc*ctcA:1*gccG*gcaK:1*accG*ggcA:1*cagG:1*gccG*ctcA*tccT*caaE*aacG*tttV*atcT:2+T:1*ggcA:1*gccV*ggaH*gccS:2*accN:2*ctgK*ttcG*gccG:2*gggA+D:1*ggcT*gggV:2*gggA*tttN:1*gcgG*aatK:2*accA:4*ttgG:1*ttcV:1*gccD:2*accA:2*gcgD:1*acgG*ctcS:2*gacA:1*ggcA*gccN:1*gggA*cacN*ggcV:1*ctgE*ttcD:2*ggcD:2+LSGQPGEGSEAN:2*gctQ:2*agcV*agcG:2*accG*ttcA:2*aacA:2*agcD:2-aac:2*ctaS*ctcS:3-gcc:3*gccN:2*agcR-ggc:1*agcD:1*ttaG*aatQ*gtcA:2*accA:2*gtcA:2*aacA:2*agtA:3*ctcV*ttcS:1*ttcD:2*gccP:2*accK:2*tccA*agcG:1*atcA:1*agcG*agcA:1*ggcA*accS:2*gacG:2+KGASGADSAEA*acgV*gccG:1*gtgA*ttcG:1*aacK:5*gccV:2*tttV:1*gctG:1*accG:1+PGGD:1*aatG*tcgA*agcG*tcgG*gtcA*cccA*aacP:1*gtgG*ctgQ*atcV:1*aacS+HGVGGVGGDGGL:2*aacA:5*aaaD*gccG:1+H:1*acaS*cccD:1*gccG*ggcD:1*accG*agcD:1*ctgG*atcD*atcP:1*gagA*aacG:2*aacG:1*ctL~gt582ac-c:1*cgcG*ccgD-ttg*atcS:3*gccT*aacR*ggcA:1*cccS:1*accV*gggD:1*aatS*ggcD+H:1*gacP:1*ggcS*tggG-ttaatc:4*gccN:2*tccN:2+Q:1*ggcS:1*aacA:8*gccD:3*ggcA:1*gccR-ggcgggctc*atcV:1*aacD:5*gctN:2*gtcD*gccG*agcA*agtA:1*atcA*ggcN:1+AN:2*ggaA*gccP:1*ggcS*aacD:1*atgL*ctgA*ttcL:1*gccQ*ggcP:1-gcc:1*ggcN*gccG:1*ggcQ:1*gtaD*gtaA*gccG*ctcQ*acgA:11*aacA*gccG:1*ctgS*ctcV*ttcS:1*gccD*gccG:1*gtcA:2*gccN:2*ttcA*acgG*aacG*ggcN*agtG*gcaG*ctcV:1*gggA*gcgS:4+AR:2*ggcN:1*ctgI*ttcD*gccS*accI:2*gtcT:2*tccA:2*gccG:1*agcG*tccD:5*gccV:2*gctH:2*ctgD*ttcG:1*gccV:2*accA*ggcA*gggP*catS:1*gggT*ttcV*gccG*gacS*agcH*agcG*ttcT:5*gccD:2*gccL:2*ctgA*ttcG:1*gcaV:2*gaaA:2*agcN:2*cacI*agcG*ctgI*gtcT*gccV:2*gacA:6*gccG:1*atgD-ctcgccctc*ggcP*gccG:3*gccR:2*atcL:3+SG*ggcN:2*ctcS*acgA:1*ggcN:1*ataV+DASKHGPLT:2*gccD:2*gccV:3*gctG*gggA*ctgK*ctcA*ttcA*ggcA*tccA:2-tccggcggcgccggcggattcggcttcgcc:6*cccD:5-acg*gtcL:2*tccD:5*aacD:1*ggaA+DGTAAEAL*gttG:1*cagD:1*ttcG:3*atcA:2*gctK:2*accD*cccA:1*ctgD:2*aacD:2*aacD:2*aacK:2-gccagcgcggtg*accD:1*ggcA*aacH:1*gggA*atcL:2*accL*ggcT:1*ttgA-atcggcaat:5*agcA:2*attA:1-gcgggcaaggcc:1*gtgA:2*gtcA*agcG:1*ctgA*ctgF:2-cta:2*ttcG:1*gctG*cccG:1*agcG-acctcgccactgcacaccctgcagcaaaatgtgctcaatgtggtg*aacG*gagQ*cccG*ttcG*cagA*acgG*ctcR*accG:1*cgcS:1*ctgG*atcG:1*aacG:1*gccV*aacG:1*actH*cctG:1*accA:1*gctG:1*ggcA:1*gccM*ggcN:1-tggctgttc:1*aacG:1*gccT*aacG:1*accQ*ccgG:1*accN:6-ggc:2*ttgS*ttcP*ggcD*aacS*ggcD*ggtL*aacK:1*gggF*cacD:1-gcgaccaacaccgccgccacg*gctF*acgD:2*gccS:4-gggatcttgttc:1*accD:2*aatA:2*accA:2*ataT*gccQ:2*gctD:2*atcD:5*gccL:1-ggggtctccttgctgatc:1*tccA:2*accV:4*gggV*aacD*tccG*ataF*ggcD*gtcI+N*gctE*ggcT*atcT:1*gggR*gccD:2*cgcD:3*gccG:1-ttg*ctcY*ttcG:1*gcgW*gccG:1*accA:2*cacN:1*gccG:3+S*gtcA:3*gtcE*ggcV:1-gccggcggcaacggcggactgttcgcc:1*ggcR:1*gccV:2*gccD:2*ttcD*aacG*gcaG*gccS:2*aacD*ggcA:5*ttcG:1*actD:1*ggcF:1*ggcY*gggL:1*ggcD*acgF*aacD*ttcG*gggE*gccP:2*aacD:2*aacD:1-ggactgttc:1*gccD:2*accW:1*ggcR*gccP*gccG:1*tcgQ:2*tccF:1*atcS:1*accS:1*ggcA*ggcH:1*cacK*ggcA:1-aacgccggcctactctcc*ctcF:2*tccP:2*gccD:2*agcD-ggtggcgccagctcccttgcc:2*gccN:2*accH:2*aacD:1*gccN*ttaG*ctcS:1*ggcA*ttcD*cgcA:1*gccD:2*gccP:2*cacN:2-gcagcacttaccagcatccag*caaN:2*gccL:4*gggR*aacD:2*ttgA*ctcP*ttcG:1*tccD*gccG:1*gccD:2*gccT:4-gccaac*gctG*ctaF:2*ggtP*accP+PRSIG:2*accD:5*cacR*gccG:1*gtgD*ttcG:1*aacR:1*ggtA*gacG:1*gL*gttT*gccS:2*tttV:1*gccS-ggt*accS:1*ggcE:3*gtcS:1*ggcN*aacG*gccR*gtgG*ctgD*atcP:1*aacS:2*aacS:2*aacE*gccG:1*aaaE*gccG:1*gccP*acgS*cccI*ggtS*gccV*ggcN*ggcV:1 +NC_000962.3 miniprot mRNA 333547 339073 3061 - . ID=MP000194;Rank=1;Identity=0.4583;Positive=0.5133;Frameshift=1;Target=tr|Q79FD4|Q79FD4_MYCTU 1 1660 +NC_000962.3 miniprot CDS 336564 339073 1698 - 0 Parent=MP000194;Rank=1;Identity=0.4706;Target=tr|Q79FD4|Q79FD4_MYCTU 1 920 +NC_000962.3 miniprot CDS 333547 335981 1363 - 1 Parent=MP000194;Rank=1;Identity=0.4443;Acceptor=AC;Frameshift=1;Target=tr|Q79FD4|Q79FD4_MYCTU 921 1660 +##PAF sp|Q79FP3|PG26_MYCTU 491 0 491 + NC_000962.3 699930 149532 363034 888 1740 0 AS:i:1123 ms:i:1176 np:i:335 fs:i:0 st:i:0 da:i:0 do:i:72 cg:Z:29M1D9M1I37M211798N1D21M6I27M2D16M9D7M2D20M8D23M5D21M3D15M9D11M1I13M12D23M11D26M2D4M2D24M2D3M2D36M4D7M4I42M12D9M2D56M cs:Z::2*tttN:1*agcM:1*gccV:1*gagG*attM*gtgL*gtgS:3*acaA:1*ctgV:1*ggtS:2*tcgA:1*atcL:4-gcc*gccG:7*gtgG+V:13*gcgS:4*cacY:1*cagR*gccD:7*gcgM:1*gcgR:5~gt211798ag-gtg:1*cggQ*accA:2*gtgA*gacS*gcgV:1*gcgS:2*agcA:6*gggS:1+LQALEQ*aacQ*atgV:3*gtcI:3*gccT:1*gcgT:11*aacD:1*gcgL:1-ggcacc:2*gccN:2*gacA:4*ttcW:5-ggcgggtccggcgcacccggacaggcc:4*gggD:2-gggttc*ttcH*ggcP:7*ggcA:1*gccM*ggaF*gcgG:6-accgccggctggttcttcggcttc*ggcA:1*aacY*ggcS*gggP:1*ggcA:1*atcT:1*gttA:2*atcG*aacA:2*ctcA:5-gacggcggcaacgcc*gggW*ttcL*ttcS:4*aacA:2*atgN:2*gccT:2*gccS:1*gtgA*aacD*gccG-gtcaatccc:1*ctgG*gccG*accL:1*gtcP*accV:2*gccS*aacP:4-ctcaacctcgtcggcgttcccggcacc*gccG:2*ggcD:1*gatG:2*aacA:1*agtM+F*gccG*attT:1*cagG:3*gctT:5-aacgcctccacgagtgggggcatcgggatcgcgcaa*accA:4*ggcD*gctS*ggcP*ggtN*gccS:1*ggcA*gacN:2*cccR:2*aacD:4-ggcagcgtcgagcacactggcgctaccggctcc*tctA:1*agcG:1*ggcA*aatG:1*gccR*accL*ggcF:4*gtcA:1*gcgG*cccN:2*gccT*ggcA:1*aacQ:2-cacgtc*agcD:2*tcgT-gtcaac*acaA*gccL:4*aaaI:2*aacD:8*ccgT:2*cacT*ggcA:1-agcgtt*ctaI*tccG:1-ccggtt*ggcS*gacS*agtA:1*aacA:10*gttG*agcT*gccG*accG*gatG*atcS*gccS*ggcM*accI:2*cgcK:2*aacT:2*catN:2*ctgV-tggatcggcaac:2*gacT:3*ggcS+ALTI:1*gtcN:1*ggtS*gtcS*ggcA:3*gcgG:2*gcgG*atcA:2*cacT:2*gatT:2*tccY*gtaI*aatE*accS*cctL*attD:1*ggcK*agcG*gagQ:2*gacN:2*aagN:2*ctgN:1-ggggacggcggtgggcgcgggatattcggccagttt*gggA:6*gccG:1-ggcgtc*ggcT:4*gctN:2*accA:2*ggcN:2*aacD:2*gccP*attS*ttcQ*aatG*gccG:1*accN:2*gccF*gccG:1*acgD:2*gacT:2*gttP:2*accV:1*gcgV*gccP*ggcD:1*aaaI:3*ggcN:1*agcA*ggcQ:1*gtcK*aacH:1 +NC_000962.3 miniprot mRNA 149533 363034 1176 + . ID=MP000195;Rank=1;Identity=0.5103;Positive=0.5776;Target=sp|Q79FP3|PG26_MYCTU 1 491 +NC_000962.3 miniprot CDS 149533 149760 230 + 0 Parent=MP000195;Rank=1;Identity=0.7143;Target=sp|Q79FP3|PG26_MYCTU 1 76 +NC_000962.3 miniprot CDS 361559 363034 946 + 0 Parent=MP000195;Rank=1;Identity=0.4791;Target=sp|Q79FP3|PG26_MYCTU 77 491 +##PAF sp|Q79FP3|PG26_MYCTU 491 0 485 + NC_000962.3 699930 131381 132833 813 1554 0 AS:i:1171 ms:i:1171 np:i:307 fs:i:0 st:i:0 da:i:0 do:i:36 cg:Z:101M3D29M2D20M1I24M5I34M1I3M9I5M5I37M2D12M12D14M1I10M1I35M3D9M1D16M9I34M2I35M10D33M cs:Z::2*cttN*ttgV*atcM*acaV*tcaV:1*gcgG*acgM*gtgL*gctS:3*acaA*catD*ctgV:1*ggtS:2*tcgA:3*acaA:2*gcgG:3*gctP*ccgT:1*acgA*gcgG*ctaV*tcgL*gtcA:7*gtgA*ctgA:2*gcgS:2*gagS*gcgG:2*cagR*gagD:7*gcaM*ctgA*gcgR:2*gacQ:6*aacT*atgA*ggtS*gcgV*gttG*tgcS:5*acaA:3*actS:5-cagactgtg*cagE:1*aacQ:2*accA*gtgA*gtcI:5*gcaT:5*atcL:5*aacD:3-aacacc:2*gacN:2*cccA:4*ttcW:7*tccA:1+D*gggA*gtgA*gatH*cagP*gccN:5*gcaD:2*ctgM*atcF:4*tccA:2*gtcA:1+YSPAA:1*ccgT:1*ataA:2*agtG:9*ctgW:1*ttcS:4*cccA:2*gccN:2*attT:1*accA*accS:1+A:3+GGLPPVPAS:3*gccN:1+GGGDA:1*aacG:1*atcA:1*ctgM:2*agcT:2*accA:2*atgT:2*gtcD:2*atgA:2*gtcA:1*aacD*ggcS*ggcP:1*gcgS:1*aacA*ggcN:1*accA*gccR:1-ctgttc:1*cacD:2*gccN:1*ggtA:3*atcA:1-agcgccgacggcgggctcggtggtggcggcggcaat:2*ttcL*atgF:4*gtcA:2*gccN:2+T*tacA:1*gctQ*agcG:4*aacT:1+L:1*aacA:2*ttgI:2*gtgD*ttcG:1*gatT:8*ctgT*ggtA*gacG*gttI*aacG:1*gggS*cttS:2*attA:2*aacA*gccG:1-ttcgtccgc*aacD:5*aatT:1*cagG-ctc:2*ggcS*gcaM*gtcI*tccG*tcgG*gcgK:2*atgT:5+VGGTGGASA:1*gtgT*ttcI:3*ggcS*cccS*ggcA:1*ctaA:2*ccgA:1*acgG*tcgA*gccG:1*aacT:2*atgT:2*aacY*gctI*gtcE*ggaS:1*ttcD:1*cagK:1+QA:1*gccN:2*gccN:2*tccN:1*ttcA*gggA*gccG:1*attA*ccaG:2*aggG*ggcT:1*gacA:2*agcN:2*ctgA*atcG:1*gacN:2*accD:2-ggtgcaggcgcgggtgacgctgctgcatcg*gccP*ggtS*ggtQ*aacG:3*gccP*cggG*ttgF*atcG:1*aacD:2*gacT:4*atgG*ttcV:1*gggV:1*ggcD:1*gctI:2*agcA*ggcN:1 +NC_000962.3 miniprot mRNA 131382 132833 1171 + . ID=MP000196;Rank=2;Identity=0.5232;Positive=0.5927;Target=sp|Q79FP3|PG26_MYCTU 1 485 +NC_000962.3 miniprot CDS 131382 132833 1171 + 0 Parent=MP000196;Rank=2;Identity=0.5232;Target=sp|Q79FP3|PG26_MYCTU 1 485 +##PAF sp|Q79FP3|PG26_MYCTU 491 0 491 - NC_000962.3 699930 336745 339073 861 1740 0 AS:i:1087 ms:i:1170 np:i:325 fs:i:0 st:i:0 da:i:0 do:i:183 cg:Z:98M7I25M2D26M2D35M10D8M6D21M4I32M2D16M1I5M651U32M1I5M18D9M6D22M26D7M8D16M3D12M1I22M4I15M6D27M2I37M cs:Z::2*tttN:1*attM*gcgV*gcgV:1*gagG*gttM*atcL*gcgS:3*acgA:1*ttaV:2*ctcI*gagG*tcgA*agcA*atcL*gccS:3*gcgG:3*gccP*aacT:1*acaA*gcaG*ctgV:9*acgA:1*gttI:1*gcgS:2*ggcS*gccG*cacY*ggcA*cagR*gccD:7*gcgM*cagA*gcgR:2*gccQ:7*tccA*ggtS*ggcV:1*gcgS:7*gccN*accA:3+QALEQQV:2*ccgA:2*gagA*ttcP*ttcT*ctgQ*gcgT*aatL*accL:8*accA*aacD:1*gccL:1-ggcacc:1*gccQ:3*gacA:2*tggL:1*atcW:4*gccN:2*tccA:1*gcgD:1*ggcA*gtcH*aacP*ggcN-ggggcc:5*gccD*ggcA:1*ctcM*atcF:9*gggY*aggS*gccP*agcA*acgA:3*ggcA:7-gccggcatgctgttcggggccgccggggtc:2*cccA:2*ttcW*gcaL*gccS-gctttcggcgccaccggc:1*gccN:8*ctgT*ttcG:1*gacS:1*gggA*gtcD:2*gccG:1+LPPV*gggP:1*accS*gacP*gccG:1*accN:2*gccG:1*ggaD*tccA:2*aacA*ggcA:1*ctgM:2*gccT:2*accA:2*cccT:2*ttcD:1-atcttt:1*ggcA:1*gccG*ggcA:2*ggcS*ggcP*tctN*ggcS:1*ctgA*ttcN:2+R:2*accD:2*aN~gt648ga-cc:2*gacA:5*tggR:6*aacA:2*cacN:1*gcgG:1*ggcA*gccG*gacQ:5*tccT*ggcA+L:5-ctgtcaggtattggcggcaccggcgggtccggcggcatcggaacgacgggccaa:2*accD:6-gccttgctgatcggctcc:5*agcT*ggcA:1*tttI:1*ctgG*gacS*accS*ggcA:4*cgcA:3-gccggcttgttcctcggtgccgcagggaccggcggccaggccgccctctcccaaaactttatcggtgccggcggcacc*gccG:6-gggctgttcgccaacggcggggcc:2*gccS*ggcS*gggM*tttI:1*gcgG*aatK:7-ttgctcttc:1*gccV:6*ggcS*acgA:1*ggcT+I*gccG*gacN:1*ggcS*gccS*gggA:1*cacA:2*ctgA*ttcG:7*gctT:2+YIES*agcL*agcD:1*ggcK*accG*ttcQ*ggcA:4*agcN:3-gccggcctactcgccctc:2*tccA:5*agcG:1*ggcT*agcG:1*ttaG*aatG*gtcN:2*accA:2*gtcN:2*aacD:2+PS*agtQ:2*tcgG*ctcN*ttcP:4*gccD:5*tccP*agcG:1*atcV:1*agcV*agcP*ggcD:1*accI:2*gacA*ggcN:1*acgA*gccQ:1*gtgK*ttcH:1 +NC_000962.3 miniprot mRNA 336746 339073 1170 - . ID=MP000197;Rank=3;Identity=0.4948;Positive=0.5603;Target=sp|Q79FP3|PG26_MYCTU 1 491 +NC_000962.3 miniprot CDS 338209 339073 664 - 0 Parent=MP000197;Rank=3;Identity=0.5216;Target=sp|Q79FP3|PG26_MYCTU 1 278 +NC_000962.3 miniprot CDS 336746 337560 506 - 2 Parent=MP000197;Rank=3;Identity=0.4659;Acceptor=GA;Target=sp|Q79FP3|PG26_MYCTU 279 491 +##PAF tr|I6YC95|I6YC95_MYCTU 564 0 514 + NC_000962.3 699930 205230 223962 585 1581 0 AS:i:741 ms:i:793 np:i:258 fs:i:0 st:i:0 da:i:-1 do:i:699 cg:Z:119M1I12M2I160M2I125M6D22M2I10M17175U42M3D12M4D4M cs:Z:*gtgM*ctgI*actD:1*ttcL*atcA*cgaK*cgcI:2*atcS*cttI:2*atcV*gtcI*tccT:1*gtcI*gcaT*atcL*gtcS:1*ttgM*ggcA*tggI*tacF:3*attL:1*agtA*ctgT*gtgF:3*cagT:1*accG*ttgV*aagS:2*ttgF*cccV:1*tcgG:4*ccgK*acgN:7*atcV*accA*attV:1*aagR:1*actE*gccS:1*gagG*cccL*accN*gacP*cagN:1*gcaV*cgaT*gtgA*acgH:1*agcR*atcL*gccN:1*aacG*tacT*aaaA:2*gtcS*gatN*gccV*tcgT:1*aacT:1*catR:4*gtgI:8*tccP*accP*ggtE*gctN:1*ggtS*aaaS+T*tacK*ttcL*tccR*tccN:1*cagF*accR:1*accQ*aagR*ggcQ*accN+TR*gttI*cccG*agtQ*gagD*atcV*gggA*ccgD*gcgL:1*gacR*aatQ*tccA*aatE*cgcT*gggL:1*gccG*gcaS:1*cccG*acgD*gagT*aagR*atcL*ggcR*ttgE:2*gacH:1*accA*gcgF*caaI:1*gtgT*ggtN:1*ctgA:2*gcgE:1*caaA:2*gtcI*gatE:1*actA*caaR*gcgL*atcL:1*ggtD*gacE*ttcA*aaaN*accA:1*attY*ggcP*gacQ:1*aacS*gacQ*atcL:1*gagD*aacQ*tccA:2*attF:1*gacQ*agcA:1*gtcI*aacR*acgA:1*gatG*cagD:1*gagK*cgcS*tggL:1*cgcD*aaaG:1*aacA*aatR*ctgF*gccT*gcaW:1*accL*gcgR*accA*aggA:1*cagP*aacR*gtgL:1*agcD*atcT:1*tccA*cagD:1*gccP*cccD*accA*gccI:2*gttA:1*gcgT*gtaA:3*gttI:1*gatP:1*ctgF:1*cagA*accL*ctgA:1*aatS:1*gagA*gttN*gtgL*ttcG*gatR*atgV*ctcG*aagV*cgcI:2*gccK*ggcS*gtgI:5*ttcV*ctcF:1*cagA+LF*ggtA:1*gcgI:1*gcaT*cagS*accA*gtaG*ctcG*acgV:1*actQ*ccgD*ggtE*gctG:1*cagK:1*ccgD*ctcF*gcgK*ccgI*gcgD*atcL*aacH*tatD:4*ttgM:5*gcaP*tcgP*gagL*tggV:5*accE:1*cccV:1*ccgE*ttgI:1*tcgR*ggaD*accM:3*attT*cccA:1*gatN*gccD*cagP*ctgS*caaT:6*attY:2*gtcQ*gatE*gtcF*ctgP:4*gcgP:1*ccgV*aagQ*gagL:2*agtD*aagP*gacR*ccgG:3*ctgV:5*tttR:1*gatP:1*aacI*cagP*attY*ctcG:1*tgcE*ccgV*gcaT*cctD:1*gcgR*cgcN*tgcI*gatL*cagP:1*gtgN:1-cccgggttggtgattccg*gcgF:1*tcgY:1*aacP*accP:1*ttgA*aatD:1*gcgD:1*gccG*gatV*cagP*gtgI*caaV:1*acgP:3+GQ:1*agtA*gacG:1*ttgG*caaP*agaA:1*ggtH*tcgQ*gP~gt17172ag-cg*ggaA*cccQ*gtcP*gacA:2*gcaP*gttN:1*ctgN*ttgG*gcgP:3*gacF*ccgT*ttgS*gcgW*ctgM:2*gcaG*cttY*gacP:1*ttgE*gcgP:1*ccgQ*ccaV:1*gacY:1*ctcA*gcgT*ccgI:3*gacP:1-ctggcagtg:1*gtaE*gcaG*gcgT:2*gttP*gccP:1*cagP*gatA:1-acatcgtttgtt:2*ccgQ:1 +NC_000962.3 miniprot mRNA 205231 223962 793 + . ID=MP000198;Rank=1;Identity=0.3700;Positive=0.4896;Target=tr|I6YC95|I6YC95_MYCTU 1 514 +NC_000962.3 miniprot CDS 205231 206593 708 + 0 Parent=MP000198;Rank=1;Identity=0.3701;Target=tr|I6YC95|I6YC95_MYCTU 1 455 +NC_000962.3 miniprot CDS 223766 223962 85 + 2 Parent=MP000198;Rank=1;Identity=0.3692;Target=tr|I6YC95|I6YC95_MYCTU 456 514 +##PAF tr|O06315|O06315_MYCTU 376 0 376 - NC_000962.3 699930 443069 444197 1128 1128 0 AS:i:1971 ms:i:1971 np:i:376 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:376M cs:Z::376 +NC_000962.3 miniprot mRNA 443067 444197 1971 - . ID=MP000199;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O06315|O06315_MYCTU 1 376 +NC_000962.3 miniprot CDS 443067 444197 1971 - 0 Parent=MP000199;Rank=1;Identity=1.0000;Target=tr|O06315|O06315_MYCTU 1 376 +NC_000962.3 miniprot stop_codon 443067 443069 0 - 0 Parent=MP000199;Rank=1 +##PAF tr|O06407|O06407_MYCTU 449 0 449 - NC_000962.3 699930 633057 634404 1344 1347 0 AS:i:2327 ms:i:2327 np:i:449 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:449M cs:Z:*gtgM:448 +NC_000962.3 miniprot mRNA 633055 634404 2327 - . ID=MP000200;Rank=1;Identity=0.9978;Positive=1.0000;Target=tr|O06407|O06407_MYCTU 1 449 +NC_000962.3 miniprot CDS 633055 634404 2327 - 0 Parent=MP000200;Rank=1;Identity=0.9978;Target=tr|O06407|O06407_MYCTU 1 449 +NC_000962.3 miniprot stop_codon 633055 633057 0 - 0 Parent=MP000200;Rank=1 +##PAF tr|O33270|O33270_MYCTU 179 0 179 + NC_000962.3 699930 408633 409170 534 537 0 AS:i:945 ms:i:945 np:i:179 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:179M cs:Z:*gtgM:178 +NC_000962.3 miniprot mRNA 408634 409173 945 + . ID=MP000201;Rank=1;Identity=0.9944;Positive=1.0000;Target=tr|O33270|O33270_MYCTU 1 179 +NC_000962.3 miniprot CDS 408634 409173 945 + 0 Parent=MP000201;Rank=1;Identity=0.9944;Target=tr|O33270|O33270_MYCTU 1 179 +NC_000962.3 miniprot stop_codon 409171 409173 0 + 0 Parent=MP000201;Rank=1 +##PAF tr|O50380|O50380_MYCTU 264 0 190 + NC_000962.3 699930 67795 68359 312 570 0 AS:i:530 ms:i:530 np:i:133 fs:i:0 st:i:0 da:i:426 do:i:0 cg:Z:122M2I66M cs:Z:*atcM:2*accS:3*gggR:2*ggcA*agcA:2*gccD:2*gttK:4*acgV:2*accS:1*accV:1*aacH*cacK:1*ttcL*aacR*tatR*ctgM:7*gtcG:1*aacH*ctcT*aacT*ccgY*tcgP:1*ctgE:1*tatF:1*ggcA:4*ttcI*acgG:1*atcT*actN:2*accA:2*ggaA:1*gccV*tcgA:1*gtcI*gacG*gccT*tttW:1*cgtP*ggaA:3*atgA*ttgS:1*atcL*atgI*cacD*gccS:1*gacG:2*ctcV*gccG*actD*gtgM*tcaD:1*gggE*gccG*acgS:4*cgtC:4*ctgV:5*gaaN:1+PS*tccD:1*tccQ*ccgV*tcgA*gaaT:1*actN*agcK:2*aacS*accD:2*caaH:2*cgaQ*gcgH*tatF:10*gtaA:1*caaA*ccgA*ccgA*gcaS*cgtQ:3*ccgA:5*agcT*gcaT:2*cagR:4*agcD:1*gtcI:1*ttcY:3*aacD:1 +NC_000962.3 miniprot mRNA 67796 68359 530 + . ID=MP000202;Rank=1;Identity=0.5474;Positive=0.7000;Target=tr|O50380|O50380_MYCTU 1 190 +NC_000962.3 miniprot CDS 67796 68359 530 + 0 Parent=MP000202;Rank=1;Identity=0.5474;Target=tr|O50380|O50380_MYCTU 1 190 +##PAF tr|O53370|O53370_MYCTU 590 0 544 - NC_000962.3 699930 299075 300797 651 1779 0 AS:i:799 ms:i:799 np:i:299 fs:i:0 st:i:0 da:i:6 do:i:210 cg:Z:28M1D31M1D62M7I33M10D17M1I68M4D35M25D23M2I8M1D50M5I16M1I34M2I22M7D49M1I49M cs:Z:*gagM*gtcI*gagC*cggQ:1*tccR:4*gtgI*atcV:6*ttaM:2*gtcA*atcV:2*cggG*gaaP:1-ggc*ttgV*aaaR*gtaT:2*gtgL*tgcT:1*tccL*ctaY*ttcP*ggcT*aagR*gccS:2*gtcG*atgA:1*gaaQ:2*tgcM*gcgC:2*atgL*ggcA:1*gccV*aacE-ccg*aagD:3*aagE*actW:1*ttcT*ggcF:2*atgV*cgcK:2*aagD*ttcY:1*aacA*aacD*tggQ*cgtD*atgA*gccV:1*ctgI*cacM*gccC:3*ccgI:1*cggA:1*tggL*gagD:2*accK*tacM:1*gcgM*ctgP:1*gacN:2*gacP*gatE:3*agtD:2*aacR:5+RDHGKAP*tatV*ccgR:1*ctgA*gcgC*cacY*gtcA*ggcA:4*ctgH*gagM*ttgI*atcL*cgcQ:2*cagY:1*aagN*gttC:1*tcgK*ctgH*cagD*cagV:1*gacF*cacF*gccN:1-ctcggcgactacgaagcgcggatcaaagtg:1*gccY*gaaA*tgcL*accD*atcL*accA*gaaL*ctgT*ctcQ*aagT*gacP*caaS:1*gcgP*atcV:1+T:1*gccV*ttcI*ggcA:1*tggE*cggL*gaaA*agcT:1*cggD*ttcI*atcH:2*gagH:1*ccaK:3*cttI:4*atcS:1*aagR*tcgM*ttcY:1*gtgT:3*tccA*tggH*gagT*tacL:4*cacI*gcgG*ttgI*gcaV*ctgF:1*gccK:1*gcgL*acgP:1*atcE*aacD:3*gtcH:6*atgL-gtgtggccgccc*agtA*gtcG*aagL:3*gtcI*actS:1*ggtA:3*gacE:2*gtgR:1*aaaL:1*tcgG:1*aacG*tctE:3*ttcE*gacR:1*attA:1*ccgT*gtgI*ttcV-aagggccagtacgccgagacggaggaagaggccgaccagtggcttaaggacaacgactcggcccgacgcaccccg:2*ctgA:3*gagI:3*gcgS*atcM*aacV*tcaL:2*aagL*gccE:3*accA*ccgG+PL*cacK*ggcD*ggcY:2*ctcI:1*atcV-gca*tccR*cggH:1*acaG*cccE*gccE*gagV*atcL*aaaE*cggA*cgaK:2*tcgD*atgI*tatT*cacE*cagF*ttcA*aaaR*gagT*ctcY*gctL*gaaG:2*atcP*acaV:1*cagE*gcaL*atgV*gaaP:1*gggY:5*gtgL:3*gtcI*gaaP*gtaT*gacT*gcgV*gacT+GQVLR*accD*ggcN*gccT*gccS*acgV:4*ttcY:6+C*ggcV*ggtS*atgV:2*tccA:4*ggcT:3*tccL:1*ctgI*ctgN:7*ctgI*ggcA:2*gatS:1*gtaA*cggQ*gcaG+HD*ctgF*agcV*agcD*cggM:1*gcgP*gttN*tcaP*gcgE*gagA*gctM*atcV*gatV*gcgG*gcgW*gccV*cagS*cagD*gcgI:2*cccE-ttcgaaggaccgaaagacggc*tcgH*gcgG*ccgN:1*aatR*ccgV*tacA*gcgD*ctgI*catR*atgG*gacA:2*tacQ*gtgS:1*aacD*gatN*ctgN*gtcA*ggtA*atcV*atcF:1*aacT*gccE*gacE*gaaT*ataL*tccK*aggQ:3*cttD*ttgI*gccH*gagA:1*tggK*tcgE:2*cacS*aacR*gtaI*ctcT:1+H*gaaD*ggtK*cacG*cgtK*caaR*tacF:1*ccgT*ggcD*tggL*aacL*ctgE*tccA:1*gacE:1*cgcG*aacF*atgL:1*ctgE*gtcL*agcA:1*tgcV*gtgT*gccV*agaV*gctG:2*cagN:1*accK:6*accA:1*gacE:1*catY:1*ggtN*atgR:1 +NC_000962.3 miniprot mRNA 299076 300797 799 - . ID=MP000203;Rank=1;Identity=0.3659;Positive=0.5042;Target=tr|O53370|O53370_MYCTU 1 544 +NC_000962.3 miniprot CDS 299076 300797 799 - 0 Parent=MP000203;Rank=1;Identity=0.3659;Target=tr|O53370|O53370_MYCTU 1 544 +##PAF tr|O53623|O53623_MYCTU 201 0 201 + NC_000962.3 699930 86527 87130 603 603 0 AS:i:993 ms:i:993 np:i:201 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:201M cs:Z::201 +NC_000962.3 miniprot mRNA 86528 87133 993 + . ID=MP000204;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53623|O53623_MYCTU 1 201 +NC_000962.3 miniprot CDS 86528 87133 993 + 0 Parent=MP000204;Rank=1;Identity=1.0000;Target=tr|O53623|O53623_MYCTU 1 201 +NC_000962.3 miniprot stop_codon 87131 87133 0 + 0 Parent=MP000204;Rank=1 +##PAF tr|O53646|O53646_MYCTU 211 0 211 + NC_000962.3 699930 230898 231531 633 633 0 AS:i:1050 ms:i:1050 np:i:211 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:211M cs:Z::211 +NC_000962.3 miniprot mRNA 230899 231534 1050 + . ID=MP000205;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53646|O53646_MYCTU 1 211 +NC_000962.3 miniprot CDS 230899 231534 1050 + 0 Parent=MP000205;Rank=1;Identity=1.0000;Target=tr|O53646|O53646_MYCTU 1 211 +NC_000962.3 miniprot stop_codon 231532 231534 0 + 0 Parent=MP000205;Rank=1 +##PAF tr|P96276|P96276_MYCTU 102 0 102 + NC_000962.3 699930 518732 519038 306 306 0 AS:i:508 ms:i:508 np:i:102 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:102M cs:Z::102 +NC_000962.3 miniprot mRNA 518733 519041 508 + . ID=MP000206;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96276|P96276_MYCTU 1 102 +NC_000962.3 miniprot CDS 518733 519041 508 + 0 Parent=MP000206;Rank=1;Identity=1.0000;Target=tr|P96276|P96276_MYCTU 1 102 +NC_000962.3 miniprot stop_codon 519039 519041 0 + 0 Parent=MP000206;Rank=1 +##PAF tr|P96395|P96395_MYCTU 437 0 437 - NC_000962.3 699930 254639 255950 1311 1311 0 AS:i:2241 ms:i:2241 np:i:437 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:437M cs:Z::437 +NC_000962.3 miniprot mRNA 254637 255950 2241 - . ID=MP000207;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96395|P96395_MYCTU 1 437 +NC_000962.3 miniprot CDS 254637 255950 2241 - 0 Parent=MP000207;Rank=1;Identity=1.0000;Target=tr|P96395|P96395_MYCTU 1 437 +NC_000962.3 miniprot stop_codon 254637 254639 0 - 0 Parent=MP000207;Rank=1 +##PAF tr|P96810|P96810_MYCTU 201 0 201 + NC_000962.3 699930 160868 161471 603 603 0 AS:i:1078 ms:i:1078 np:i:201 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:201M cs:Z::201 +NC_000962.3 miniprot mRNA 160869 161474 1078 + . ID=MP000208;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96810|P96810_MYCTU 1 201 +NC_000962.3 miniprot CDS 160869 161474 1078 + 0 Parent=MP000208;Rank=1;Identity=1.0000;Target=tr|P96810|P96810_MYCTU 1 201 +NC_000962.3 miniprot stop_codon 161472 161474 0 + 0 Parent=MP000208;Rank=1 +##PAF sp|P9WGI7|GLYA2_MYCTU 425 0 425 - NC_000962.3 699930 77621 78896 1275 1275 0 AS:i:2184 ms:i:2184 np:i:425 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:425M cs:Z::425 +NC_000962.3 miniprot mRNA 77619 78896 2184 - . ID=MP000209;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGI7|GLYA2_MYCTU 1 425 +NC_000962.3 miniprot CDS 77619 78896 2184 - 0 Parent=MP000209;Rank=1;Identity=1.0000;Target=sp|P9WGI7|GLYA2_MYCTU 1 425 +NC_000962.3 miniprot stop_codon 77619 77621 0 - 0 Parent=MP000209;Rank=1 +##PAF sp|P9WHV5|PPX1_MYCTU 344 0 344 + NC_000962.3 699930 586345 587377 1029 1032 0 AS:i:1700 ms:i:1700 np:i:344 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:344M cs:Z:*gtgM:343 +NC_000962.3 miniprot mRNA 586346 587380 1700 + . ID=MP000210;Rank=1;Identity=0.9971;Positive=1.0000;Target=sp|P9WHV5|PPX1_MYCTU 1 344 +NC_000962.3 miniprot CDS 586346 587380 1700 + 0 Parent=MP000210;Rank=1;Identity=0.9971;Target=sp|P9WHV5|PPX1_MYCTU 1 344 +NC_000962.3 miniprot stop_codon 587378 587380 0 + 0 Parent=MP000210;Rank=1 +##PAF sp|P9WI17|PPE23_MYCTU 394 37 348 - NC_000962.3 699930 467013 467998 453 1023 0 AS:i:539 ms:i:553 np:i:191 fs:i:1 st:i:0 da:i:3 do:i:339 cg:Z:55M1I108M1G32M18D3M1I17M6I10M1I14M5D22M7D30M3I7M cs:Z:*gatN:10*gccG:1*atcM:6*aggG:3*caaA:5*caaD*cggG:2*aacA:2*accS*gcgS*acgA:1*gctT*tccG:1*tccG*tcgA*gtgA:2*gggE:2*ggcN*gatM*gacR+W:1*ctgS:2*tcgA*gcaS*ctgD:2*gcgV:2*gccV*gtcL:1*tatF:1*gcgG:1*atgL*aggS*gccT:2*gccT*tcgL:5*gctM:2*gtgR:3*aacA:1*tacF:1*tcgA:1*tacF:1*gcgM:4*acgP*gtaA:5*cgcT*acaL*atgL*ctgM*tcaT:2*cagD:2*gttW:10*agtT:1*acgS*cacQ:1*ggcA:4*catQ:1*atcA*ttgA:2*gacY:3*ggcS:1*tcgA*gggA*gccP:1*tccT*cagV:1*cT*gccP*gttF*cacA:3*gcgQ:2*agcN*gggA*gccT:1*tcgL*ctgV*agtG*gacH:1*gccT:1*acaV:2*cagL*gcgR*gtaG*gtaQ*ccgH*gccS*gccW:2-accgacgtgagcctgctaccaaccctgcagtccttcctaccgccgcccttcgac:3+W*aacS*cccD:1*gagQ*gatK*cttY*gacW*gttM*ctcM*gtaF*gccL*gcaG:1*gtaL:1*gtcT:1+EGFIYD*gctS:1*agtG:1*gggT*gtaL*tcgN:1*gcgL:1+F*ctcV:1*gagG*atcM*tacL*cgcW*cacS*gacT*gtgA*gtcL*gacA:2*caaG-aaggcgccgcattgc*ccaA:2*tccA*gacA*cagA*acaG*cccA*gctG:4*gacW*gggS*gatA*ctcW*cctS*gagQ*gtcL:1*ggaA-cgggtcaccagcccgccacag*ccgG:4*ctcS*accA*ggcT*tacL*tccA:1*aacK:2*ggaP*ctcM:3*cacP*agcG:1*aatS*cttA:3*gtgT*cgcP:1+AQT:2*gcgR*atgS*ttcI:2 +NC_000962.3 miniprot mRNA 467014 467998 553 - . ID=MP000211;Rank=1;Identity=0.4428;Positive=0.5601;Frameshift=1;Target=sp|P9WI17|PPE23_MYCTU 38 348 +NC_000962.3 miniprot CDS 467014 467998 553 - 0 Parent=MP000211;Rank=1;Identity=0.4428;Frameshift=1;Target=sp|P9WI17|PPE23_MYCTU 38 348 +##PAF sp|P9WKT9|Y499_MYCTU 291 0 291 + NC_000962.3 699930 589182 590055 873 873 0 AS:i:1532 ms:i:1532 np:i:291 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:291M cs:Z::291 +NC_000962.3 miniprot mRNA 589183 590058 1532 + . ID=MP000212;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKT9|Y499_MYCTU 1 291 +NC_000962.3 miniprot CDS 589183 590058 1532 + 0 Parent=MP000212;Rank=1;Identity=1.0000;Target=sp|P9WKT9|Y499_MYCTU 1 291 +NC_000962.3 miniprot stop_codon 590056 590058 0 + 0 Parent=MP000212;Rank=1 +##PAF sp|P9WLT9|Y1588_MYCTU 222 0 222 - NC_000962.3 699930 104436 105101 624 666 0 AS:i:1061 ms:i:1061 np:i:212 fs:i:1 st:i:0 da:i:0 do:i:0 cg:Z:97M2G124M cs:Z::18*gacE:12*agcT:14*gcgV:5*gccV*cagG:1*acgA:6*accA:24*gaaD:1*ggcA:2*agcI:1*gaaD:1*aagA*ccD:2*caaP:121 +NC_000962.3 miniprot mRNA 104434 105101 1061 - . ID=MP000213;Rank=1;Identity=0.9369;Positive=0.9550;Frameshift=1;Target=sp|P9WLT9|Y1588_MYCTU 1 222 +NC_000962.3 miniprot CDS 104434 105101 1061 - 0 Parent=MP000213;Rank=1;Identity=0.9369;Frameshift=1;Target=sp|P9WLT9|Y1588_MYCTU 1 222 +NC_000962.3 miniprot stop_codon 104434 104436 0 - 0 Parent=MP000213;Rank=1 +##PAF sp|P9WMB1|Y0026_MYCTU 448 0 448 + NC_000962.3 699930 29721 31065 1341 1344 0 AS:i:2278 ms:i:2278 np:i:448 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:448M cs:Z:*gtgM:447 +NC_000962.3 miniprot mRNA 29722 31068 2278 + . ID=MP000214;Rank=1;Identity=0.9978;Positive=1.0000;Target=sp|P9WMB1|Y0026_MYCTU 1 448 +NC_000962.3 miniprot CDS 29722 31068 2278 + 0 Parent=MP000214;Rank=1;Identity=0.9978;Target=sp|P9WMB1|Y0026_MYCTU 1 448 +NC_000962.3 miniprot stop_codon 31066 31068 0 + 0 Parent=MP000214;Rank=1 +##PAF sp|P9WMY7|MSHA_MYCTU 480 0 480 + NC_000962.3 699930 575347 576787 1440 1440 0 AS:i:2465 ms:i:2465 np:i:480 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:480M cs:Z::480 +NC_000962.3 miniprot mRNA 575348 576790 2465 + . ID=MP000215;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMY7|MSHA_MYCTU 1 480 +NC_000962.3 miniprot CDS 575348 576790 2465 + 0 Parent=MP000215;Rank=1;Identity=1.0000;Target=sp|P9WMY7|MSHA_MYCTU 1 480 +NC_000962.3 miniprot stop_codon 576788 576790 0 + 0 Parent=MP000215;Rank=1 +##PAF sp|P9WNF9|ETHA_MYCTU 489 4 475 - NC_000962.3 699930 656033 657443 693 1413 0 AS:i:1205 ms:i:1205 np:i:303 fs:i:0 st:i:0 da:i:27 do:i:21 cg:Z:193M1I277M cs:Z:*gtcL:11*ctgV*ggcS:2*tacW*cggH*atcL*atcQ*gaaD:1*aacC:1*cagT*ctgK*accS:1*accA:3*aggK:1*gcgE*cggS*atcM:11*gtgI:4*agcD*atcM*ttcY:2*tcgG:1*cccR*tacF*gagR:3*cgcG*gaaR*gaaQ*ggcA:4*gccK*cacP:1*cgcL:2*ctcV*accK*gacS*atgT:1*cacA*aagM:7*gagR:1*aacH*agcH*tacK:1*cgcI*gcaS:3*gacS*tcaT*tccA*accE*gatN*accR:3*accH*ttcI*gagQ*cagS*aacH:1*gtgT*cacL*aagS*cacA*tacL*cgcT*agcC*cggE:1*gtgL:1*ttcL*ggcC:10*accS:1*gacR:1*ggaA:1*atcS:1*aagD:1*ggcV:1*gcgP*gtaI*gtgI:11*accD*ggcA:1*aagN:13*atcV:1*tcgA:1*accA:1*cggS+G:1*gaaK*aagH:10*ctgI*atcV:1*gcaQ*tccP*aaaD*tacR*agcD*acgG*ttcI:1*gccE*gttK*gttL*cgtN*aaaR*gcgW:2*cccE*aaaT*actM*tctA*cacY*ttgT*attA:2*atgW*tacK:1*gcgV:1*ttgR*gaaQ:1*gtgA*ttcV*tggY*ttcS*ttgA*tccC*cgcQ:1*acaW:1*gtgR*ttcR*gtgM*aaaR*tggK*ctgM*ctgF*cgcL*cgtS*accL*gcgI*atcQ*aaaR*aatQ:6*atcV*gaaR*accK:2*acgG:1*cggH:10*atcV:1*gacN*gccG:2*tacF*aacR:2*accR*agcH:1*cgcK*gccV:5*catT:1*gacE*cacR:1*gacT:4*gcaR:1*aaaN:2*gggR*cacE:1*gatP:4*gtcI:5*cagN:2*gcgL*cttF:3*gcgT*atcA*agcT*ctcI:2*gtcQ*gagQ*atcV:1*cctI*cggT*gatT*cgcT*tttM*gtcA:2*gcgG*cacM:2*gaaS*gacG*gtgI:2*ctgM*ttcA*tggY*tgtT:10*cgcK:2*atgL*acgV*gccS*cggE*gcgF*acgV*gcaC*aaaR:2*gcaN*cacY:1*gccD*gccD*catN:1*cacF*acgD*cgcT*gccV*gccV*ccgV*cacE*ctgR*ggcP*gacG*gagS*ccgD*atgV*gacE:1*aaaR:1*tccF*tggM*gacE*attF*cagT*gccP:3*aagL:1*gcgS*ccgL*tacD*gcgE:3*tccQ:1*accS*aagR*cggT:2*aatR*gtaL*cgaN:4*gccR:1*gccI*atcR*gacL*tacI:1*ttcR*gacG*cgcK:1*gagD*gagD +NC_000962.3 miniprot mRNA 656034 657443 1205 - . ID=MP000216;Rank=1;Identity=0.4904;Positive=0.6433;Target=sp|P9WNF9|ETHA_MYCTU 5 475 +NC_000962.3 miniprot CDS 656034 657443 1205 - 0 Parent=MP000216;Rank=1;Identity=0.4904;Target=sp|P9WNF9|ETHA_MYCTU 5 475 +##PAF sp|P9WPI5|Y106_MYCTU 398 0 398 + NC_000962.3 699930 124373 125567 1194 1194 0 AS:i:2102 ms:i:2102 np:i:398 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:398M cs:Z::398 +NC_000962.3 miniprot mRNA 124374 125570 2102 + . ID=MP000217;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WPI5|Y106_MYCTU 1 398 +NC_000962.3 miniprot CDS 124374 125570 2102 + 0 Parent=MP000217;Rank=1;Identity=1.0000;Target=sp|P9WPI5|Y106_MYCTU 1 398 +NC_000962.3 miniprot stop_codon 125568 125570 0 + 0 Parent=MP000217;Rank=1 +##PAF sp|P9WQE7|PPSA_MYCTU 1876 0 993 + NC_000962.3 699930 485733 488694 1284 3060 0 AS:i:1823 ms:i:1823 np:i:586 fs:i:0 st:i:0 da:i:3 do:i:1242 cg:Z:8M1I70M1I8M6D56M8I7M3I79M1D259M1D32M6D36M1D5M2I48M1I60M2D90M2I110M1D4M4I23M4I25M9D12M4I14M3I14M cs:Z:*acaM*gacT:2*gtcI*actS*gcgG*gatE+A*aagD:1*caaR*aaaH:1*tttL*cgaI*gagD:2*tccV:1*catN:1*gagG:1*catT:1*aatD:2*agcD*ctaP:1*gttL*ccgS*attL*agaA:3*ttgV*aaaS:1*attR:1*gtcA*ttaV*gcgV*attL*cccS:1*gacE:1*ggtS*gacE*agaL*tttL:1*tttR*tgtT*attV*cccS*gatP*ttgI*gccD*gttF:1*gatE*aatH:1*agcT*gctI:1*gatA:1*attA*gatA*agtY:1+A*ttgA*aacP*cagE*cgtP:1*gctP:2-ttaagagagagtcatgga*cacD:1*gacA*aggV*aacK*acgR*cagG*ggtA:1*ggcN:1*ataL*aacD:2*gttI:2*atcV:1*gtgM:6*gatG:1*gacS*ggcC:2*cggA:5*accC:1*aagR*aagR*tgtS*gcgS:1*acaS*gcgQ*tatV:1*gatP*cgtQ*gggR*ttcW*acgQ*aatP+FEGGPPEV:1*ggaA*actA*ttcL:1*gagR*tccT+TRW:1*ggcS:2*aagP:1*gtcI*gcgD*ggtA:2*aatA*agaE:2*gatE:1*ccgS:1*gacS:2*ctgD*cgaK:11*tctA:9*attP:1*gagG*tcaT:2*cttR:1*cgtA:4*gttA:1*gtgA*tcgC*tcaL*actS*gacE:1*gtcG*cggA*cttM*gtgA:2*agcD*gctL*cagS:1*aagV*tctD*actG-att:1*gatS:1*accS:2*tctA*tcgM:6*atcL:5*attL*cagR:3*attV*gtcA*attV:10*gtgI:4*cgaQ:2*agtR:1*tggQ:2*gatH*atcL:1*cttI*gtcA*ggtA:1*acgV:1*gttL:1*attL:2*gaaA*ccaV*tggF*ggtR:2*aggD*gaaQ*gcgV:1*atcA:2*cagP:2*tgcQ:1*cacR:3*aaaA*tccT:3*atgF:5*tgcA:2*atcV:2*cagK:2*agtT:2*cgcQ*cttR*gagD:1*cggD:1*ataV:2*attV*ctgI*acgC:8*aagR:3*attL:5*agtA:2*attM*ggtA:2*gaaR*aatA:1*tgcY*aagT*agcN:1*cgcG*gtcM*gatQ:1*ctgS:1*atcV*ggcD:9*tcgL:3*aggP:3*cacR:3*atgT:1*tttL:2*aagG:2*ggaE*tctD*gggS:2*atgL:3*atcV:1*ccgT:1*atcL:2*ctgT:1*ggtA:6*ttgF:2*gcgT:2*atgA:1*gagQ*cgtH:1*tcgQ*ctgI*cttP:1*agcN*gggQ*gggH:1*acgE*gagT*ccaA:2*gctH:4*gaaD:1*ggcR*ctgM*agaK:3*gaaT*cttQ*cagT:3-gtg*gtgA*gcgT:1*cggH:18*attV*gtcI:1*gaaQ*gctG*ggtQ*tcgE:1*gggR*gcgP-gacacggtttcgggccgc:1*gatP*gttG*ggcQ:1*tccL*ggtS*ggtP*gggA:1*gtgS*gcgT*tggL:1*attV*tcgA:3*gctM*tcgQ*gcgR*ttgV*gctS:1*cagT:2*cggM:1*gggA*cggD*tatW*gtgM*cggE*gctG-cgg:1*gcgG*cttA:2+AL*gttA:2*gggA*tatH*tcgT:1*gtgN*agcH*acgH:2*gtgR*tttQ*gatP*catK*cggF*gcgG*gtgT:2*ggcA*cagR*actD:1*gatT*gagQ*ttgA*ctgI:3*gctR*gggA*gtgL*gttA:2*cggQ*ccgH*gagA*gctP:3*tgcN*ggtP*gttA+D:1*aagS:1*gcgG*ggcP*aagG:1*gctV:2*tttY*gccS:1*cagR:4*ctgA:3*agcR*gagQ:1*tatL:1*gccD*tacE:1*gttA:2*gagA:1*ctcV*gatA*gctE*gtgL*gtgE*gacP*gagV*ttgF*gacV*cggE*cacQ*ctgA*cggG*tatF*ccgS:1*cgcH:2*atcL*tggA*gggN*cacG*gacE*caaE-gatctg:1*aatV*accG*accI:1*ttcQ*gccI:1*ccgL*gcgG:1*tttI*gcgG*gtgM*gagQ*gtgL:2*tatT*cggE:1*ctcW*atgC:1*tggY:4*ggtD:2*ctgI:3*gtgM:2*ttgV:3*cacV:5*tgtT*ttgP*ccgA*gatE*gcgG*gcgL*atgR*ctgV*gtgT:1*gcgT:1*ggaS:3*cagA*gcgP:1*cccS*gccG*ggcQ:1*gccG:1*tttA*gcgL*gtgL*cagE*gccL*cgtD*gaaA*gacP*gagT*gtaT*gcgE*ccgA*atgL*ctgI*gggA*cacD+FP*gatQ:1*agcT*atcL*gcgG*gcgI*gtcY:1*ggtS:1*gctR*tcgQ*gtgT:2*tctA:1*gccP*cacT*gatE*gcgQ*gtgI*agcD*gcgE*atcL*gctI*gatA:1*ctgV:1*ggcA:1*ggcN:1*cggF*gtcA*cacS:1*ttgV*gcgN*gtcI*tcgE*catV:1*tttP:1*tcgN*gcgP*ttgA:1*gagD*ccgA*atgL*atcQ*gctP*gagA*ttcM*acaR*gccS*gttE*gcgL:1*gaaD:1*tctT*gtgP*ggcR*ttgT:3*ccgG*gtcI:2*aatT*gtgT*accY*gggA*cagD:1*gtgH*gccT*gacQ*gacP*ttcV*gccF*tcaD:1*gatE*tacH:2*cggT*catN*atcM:1*gcgN*gtgP:3*ggcQ*gacQ*agtA*gttI*cgtA:2*cacG-tgc*gccS:2*agtD+GAYH*cgtT:3*gtcI*gggS*cccA*ggtH*ggcP*ggcL:2*tcgQ*ttgA:1*gagI*gcaD*tcgT:1*gccH*gacS:2+PGAR*atcY*gtgT:1*gtgL*cccG:2*cgcQ*aaaR:1*cggT*cccD*gaaD*ccgV:1*agtT*gtgF*atgR:1*gcgN*gcgL*gccN*cagK*ggcA*ttcH-gtctcggggatgggcctggattgggcc*tcgT*gtgI*tttH*tccP*gggP*tacH*cggT:1*aagH*cggP*gtgP:1+PHPP*ttgI:2*tatT*gccP*ttcW:2*caaT*aagR*ttcH:1*ctcI*gcaT+TKY:2*ccaG:2*agcG*gacS*cccA*accP*gccR:2*cagT*atcL +NC_000962.3 miniprot mRNA 485734 488694 1823 + . ID=MP000218;Rank=1;Identity=0.4196;Positive=0.5745;Target=sp|P9WQE7|PPSA_MYCTU 1 993 +NC_000962.3 miniprot CDS 485734 488694 1823 + 0 Parent=MP000218;Rank=1;Identity=0.4196;Target=sp|P9WQE7|PPSA_MYCTU 1 993 +##PAF tr|Q6MWW6|Q6MWW6_MYCTU 1489 0 1332 - NC_000962.3 699930 672112 675916 2190 4152 0 AS:i:3071 ms:i:3053 np:i:806 fs:i:0 st:i:0 da:i:0 do:i:-1 cg:Z:29M1I94M1D48M2D26M2D12M1I13M2D32M4D13M3I12M1D8M2D20M1I35M6D61M7I3M2I27M1I7M3I18M2I8M9I51M2I20M5I30M6I21M6I24M1D31M6D22M1D12M3I8M1I9M2I7M1D10M5I11M2D20M1I11M5D15M4I16M1I23M3I2M6I26M4I11M2I23M10I22M2I16M2D26M1I1M1I32M1D20M3I13M1D13M4I21M1D37M1D26M3I4M3I26M1I4M4I11M3I41M4D15M6D19M cs:Z::4*atcL*gcgI*acgA:2*atgF*ctgV:1*acgA:2*acgG:2*gcgT*aaaN*attL:2*acgS:1*actS:3+A*accS:2*gccS:1*gtgT*gcgT*aaaQ:2*cccA:1*tcaG:5*gtgA*gccR*gttI:5*acgG*cacF*gccG*cagL:3*accA*gtcI:5*acgA*tttY:1*gacQ:4*accA:2*gcgT*gccG:1*agcG*tcgA:1*gtgA*gccS:3*gtcA*aacA*gttA:2*agtI*ttgV:1*gccG*gcgV*gtcI:7*ttcL:6*aacD:2*gacN*ggcA*tccT*cccT-ggg*accP:1*cagG:3*ccaA:2*atcL:1*tacF:4*aacA:1*gggA*tctA:5*cgaA:2*gccP:2*gcgP:3*atcW:4*aacP:5*gtgS:1-accacc:2*gccT:2*cacA:7*tatF:1*aacV:5*tttV:4-gcggtc:2*aacT:5*accP*gccG:2+I*ttcW:1*gtcG:5*gccV:2*aacA:1-atcgcc:1*gtcG:2*acgG*tcgA*gccG*agcG*acaR*ccgA*ggtE*ggaL*tccL*ggcF*accG:6*atcA:1*ggcT*aacD:2*gccP:1*gggA*gccT:1-ggggtgctgatg:1*aacT:2*aacH:2*gccV:2*gagD:2+WLA:8*gccG*agcQ:1*gccG-cac:1*accG*aacG*ttgA:1*gctS:2-caagcc:1*ggaA*aacL:2*aatT:2*gctT:5*gtcA:2*cccA:2+R:1*cacA*ggtL:3*ctcA:2*agcQ*cacG:1*gccL:5*agcQ:2*gacT:3*cccG:3*ggcV*aacL:1*gctG*accV:1-acgtggggtcacaacctt:1*gccT:2*accK:2*aatV:2*aacV*ccgA:1*gccL:6*ggtA:1*gccQ*agcL*gtcF*ggcS*ggcA:1*gcgG*catA*ggcA*gcgG:1*ggcA*gcgG*cccV:1*accG*accA*tccG*accG*agcQ:2*aacD:2*gacA:2*aaaA:4*atcD*agcQ*agcP:1*cagA:1+GGTGFAG:2*aacG+GA:2*aggA:2*gacS*ggcS:1*cagA*gtgG:1*aatT*ggcN:1*gccS:5*cgcQ:5*ctcA+G:1*tttA:1*tccA*gaaD*gcgN:1+TGI:1*cgcG*cccT:2*gccD:6*ggcA:1*aacA:2*actA+GG*cagA:2*gacT:4+GMIGTTGNA:1*gctV:5*gatQ:2*tccD:4*agcG*atcA:1*ttcA*aatD:1*tccD*gctQ:3*gcaT:1*tcaG*cccT:1*gggF*aatA:2*aacA:2*cctA:5*gagS*ggcS:4*ctcT+NG*gcgS*ttgG*gccG:1*tcgG:1*cagT*aacG:1*agcQ*cagG:4*gacA:4+ADNPT:1*aacI:3*cctG:1*aacD:2*cacT:1*gccG:1*ggcA*gcgG*ctcA:1*gtcG*aacA:2*gtaA*ggtA:1*gccT:2*cacT:1+GMIGTT:1*gatN*cccA:10*agcD:1*tccG*accA*cccG:2*aacG+ADADQP:2*cccT:1*aacG:1*cccG*accF*agcA:2*aacA:2*aacA:1*ggcK*agaA:1*gccG*gatS*gccS*accS*ggcA-ttt:1*cagG:1*ggcN*gcgS:2*ggcS*aggA:2*gatT:1*ggtR*ttgQ*gtcS:1*aacT:7*ggcA*aacD*ggcN*agcP*aaaT:1-ctgcccggtctgggcagg*ctcI:1*aacG*cccT:1*ctgG:6*aacA*ggtA:4*tccA:3-tgg:2*aacT:5*gccM*ggcI:2+TGN*ggcA:4*actA:2+S:2*agcA*gacG:1*gtcT:3+GG*agcA*gcgG:1*gcgT:2*cacQ-ccc:2*accA:2*gttA:2*accA:1+ADNPT:1*aaaI:2*gacT:5*gccT-gcaccc*aacG:1*gtcA:2*agcA*caaG:1*cccA:3*ggcA:1*gacT:5+M*gttI:1*ggtT*aacT:1*ggcN*cgcA:1*attV*gacG:1-gccgacggcgccacc:2*gccG*cgcQ:1*cagG:8*ggaA+DADQ*aagP:1*ggcA*cgaT:4*gggF*ccgA:4*ccgG:1+G:1*acaS*accG:2*caaS*ggcC:3*aacT*ggcN:4*accA:2*gacT*cccC:1*gacQ+VVA:2+AGISFS:2*gctS:2*agcG*gtgT*ttcG*accG*aacT*aacG:1*atcV:2*aacT:2*aacD:5*cccT*agcG+AGDP:1*gccK:2*agtT:2*gccT:1*tccG:1+GG*ttcS:1*gcgG*accA:1*tcaG:1*agcG*agcG*attA*catN*gtcF:3*aacT:2*aacT:2*aacT:1+GKGGLNTDGL*gacS*catS:1*ctcT:2*aacT:1*gcgG*gccT:2*aacT:2*aacK:2*aacT:1*agcG*ctgA+GD*cgcD*ggcS*agcA:2*gccT:2*cacT:2*aacA:4-agcagg:1*atgA:2*gacL*ggcA*ggaN:3*gccT*ggcA:4*cagI*attG:1*aacD:2*gcgQ:3+G:1+Q:2*ggcS:1*accS:1*agtL*gacG:1*aatQ:2*gccF*attA*accG:1*agcA:2*cgcK:2*gacA:2*gtaS*ggcS:1*caaA:2*agcT-gtc*gccN:1*gacS:1*gctG*gacA:2*cggA:2*gccQ:2*acgA:2*acgA:1*ctgI+SFS*cggN:1*accS*accN:1*gccG:2*gcgG:2*acaG*ttcV-gac*gctG:1*gcgT*gacG:1*cacD:3*ggtA:3+AGDP:1*gttK:5*gccT:2*ggcT:2*aacS:5*aaaS*gcgG-ctg*tcgG*ccaA*acgN*ggcF:1*aacG:1*agcT*caaG:1*gccT:2*gatT:2*gccT:2*gccK:2*accM:2*accI*ggcA:4*agaP:1*gccG*cacD:1*actG-ctc*ttcN*agcA*agcG*ctcV*gctG:1*actK:3*ggcN:4*accS:10+GNA:4+LAN:2*tccG:1*ctgA:1*gcgN*accA:1*gcgI*acaG:1*gcgD*gccG:1*cgcQ*gccG:4*gtcQ:1*ggcD:2+S:3*tccG+QPGF:1*tttG:4*accK:2*atgA:1+GNA:1*gccT:3*agcN*accG*gtcS*agcG:3*gacA:2*aggQ:2*ttcA:2*gacA:1*cttI*gatS*gccF:1*tccN:1*gggS:3*gacT:2*cacT:2*gacV:1-ttcaggaccgct:1*gcgT:2*cgaD:2*gacN*ggcA:1*aaaT:2*gacG*cccD-ggcggtttattcccgatc:2*gctK:2*aagT:8*accS*gcaG*cacG*ctcA:1 +NC_000962.3 miniprot mRNA 672113 675916 3053 - . ID=MP000219;Rank=1;Identity=0.5275;Positive=0.5824;Target=tr|Q6MWW6|Q6MWW6_MYCTU 1 1332 +NC_000962.3 miniprot CDS 672113 675916 3053 - 0 Parent=MP000219;Rank=1;Identity=0.5275;Target=tr|Q6MWW6|Q6MWW6_MYCTU 1 1332 +##PAF tr|Q6MWW9|Q6MWW9_MYCTU 1381 0 984 - NC_000962.3 699930 672400 675916 1590 3585 0 AS:i:2060 ms:i:2103 np:i:598 fs:i:0 st:i:0 da:i:0 do:i:-1 cg:Z:29M1I66M2I32M1D44M2D29M12D16M15D15M6D13M11D6M10D17M8D9M14D1M219V28M6D13M4D8M9D8M15D17M16D10M12D26M13D13M22D12M2I29M2I21M9D42M3D23M4I19M19D38M7I21M1I26M25I31M14I19M2D25M10I16M2I6M2I27M1D39M4I20M12I19M7I27M1D28M cs:Z::4*atcL*gcgV*acgS:2*atgT*ctgV*accA*acgA*gcgV:4*gcgK*aaaR:2*tcgA*acgS*atcL*actA*gcgH*gccE:1+A*accS:3*gcgS*gtgT*gcgT*aaaA:1*ctgV*cccS:1*tcaA:5*gtgT:6*ggcS*acgQ:3*gaaG:2*accA*gtcA*agcA:4*acgA:2*gacS:4*accA:1*tccT:1*gccG:1*agcG*tcgA:1*gtgA*gccF:3*gtcA:1*gttA*gaaS+PL:2*ttgA*ctaM*gccG:2*aatS:1*cccS*accA:1*gcgT:1*ttcL*ggaS:8*gacN*ggcA*tccT*cccT*gggP*accG:1*cagN-gcc:2*ccaD:2*atcW:1*tacF:1*aacS:4*gggA*tctP:2*ccaA:2*cgaS:2*gccN:2*gcgS:3*atcW:4*aacA:5*gtgS:1-accacc:1*gggA:3*cacN:2*gcgN:4*tatF:1*aacA:2*gccT:2*tttI:2*gccT:2*gtcP:1-ggcaacggcggggccggcggtaccgccgggttgttc*ggtA*gtcM:2*gccT:2*gccN:4*atcA*gccL*ggtL*gtcI-acgggtacgtcggccagcacaccgggtggatccggcaccgctggc:1*gccG:2*atcL:2*aacA:2*gccM:2*gccT:1-ggggtgctgatgggcaac:2*aacT:2*gccT:2*gagN:2*cccN:1-ggcgccggcggtgcgggcgccagcggcgcccac:1*accL*aacL*ttgI:2-gacggtcaagccggcggaaacggcgggaat:2*gctV:2*accA:2*gtcI:2*cccQ:1*ggcT:1*cacA:1-ctgctcggcctcggcggcagccac:2*ggcA:4*agcT:1-ggtgacggcggagctcccggtgacggcggcaacggcgctacc:1*acN~gt216ag-g:2*gacA:2*cagL*gtgF*ggtM:3*gccD:5*cgcQ:2*gccD:1*ggtA*ctcA:1*tttD*ggaA*tccA-gaagcgcccggtcgcccc*ggcA*gggS:6*gccK:2*aacQ:1-ggaactcaggcc:8-ggcggggccggcggcgatggcggatcc:4*agcP*atcV*ggcL:1-aatgcgtccgctcccggggccgcaggctcacccggcgggaatggc:1*aacH:2*cctA:2*gccM:2*gagQ:2*gccT:2*ctcM-gcgttggccgcctcgggccagaacggcagccagggcgctggcggtgac:5*aacD:1*gggT:1*cctV-ggcaacggcggtcacggcgccgccggcgcgctcggt*gtcI*aacA*ggtA:1*gtaT:2*gccE:2*cacT:2*gatA*cccA:1*gtcA:3*ggcA:1*cagA*ggcR:1*agcA-ggctccacccccggtgccaacggcgcacccggcaacacc*cccL:4*aacL*ggcA:1*aacG*ggcV:1*agaA:1-gccgatgccaccggctttggccagaccggcgcgtccggcggcaggggcggtgatggcggtttggtc:1*aacT:2*gccT:2*gccT:4+AD*agcA*aaaA*ggcA*ctgV*cccV:1*ctgF:1*aggA*ctcN:1*aacD:2*ctgF*gatA:2*accK:5*gccI:2*tccA*ggcA+VT:1*gccG*tggV:2*aacD:5*gccK:5*gtcA:2*actA-ggagggtccggcagcgacggtgtcaac:1*tccN*agcD:2*gcgS*gacT:1*cacN:3*accK:2*gttD:2*accI:2*aaaA:2*gacA:2*gacA*ggcA:1*gccT*gcaG*cccN*aacG:1*gtcH:2*agcN*caaT:1*cccD-ggcggtgcc:8*gttN:4*ggcT*cgcG:1*attV*gacN:3*ggcN*gccT+LNPD:1*gcgP:1*gccG*cgcA:1*cagE*gatP:8*aagA:2-cgaggcgggaccggcgggccgggcggggccgggccggcgggcacaaccggcagccaa*ggcA:3*aacP:2*agcT:5*gacN*cccG:1*gacN:4*gctG:2*agcG*gtgN*ttcG*accG:1*aacG:1*atcN:3*ggcA:2+NSTNAPV:2*aacE*gccG:1*cccA*agcG:1*gccD:2*agtA:4*tccG*actA*ttcA*ggtN*gcgG+G:1*ggcA*tcaG:1*agcQ*agcG*attT*catG*gtcG*aacV:2*aacD:2*aacA:4*gacG*catG*gccG*ctcK*agcA:1+TGNSGNFGVDGEAGFSGGAGGNGGV*aacG:4*ggcA:3*aacT:2*aacS:1*agcG*ctgN*cgcG:1*agcD:5*cacI:2*aacA:3+GIPGTGTEPAGGTG:1*agcK*aggG:1*atgD:5*accA:8-cagatt:1*aacA:2*gcgQ:3*ggcA:1*gacQ:2*accA:1*agtG*gacA:1*aatG*cccN*ggaA*gccV:1*accP:1+DGVGKAPHGD*agcA:2*cgcS:5*gtaK:6+GG*gtcT*gccG:1*gacS:2+PI*gacG:2*cggA:2*gccT:2*acgS:2*acgH*ggcA*ctgG*cggK:1*accG*accA:1*gccG*accI:2*accQ:2-ttc*gacT*gctI*ggcT*gcgV*gacP:1*cacN:3*ggtA:1*accD:2*gttN:2*accN*ggcA:4*ggcN:2*aacS:1*gggD*gccF:2*aaaN*gcgT*ctgT:1*ccaG*acgA+SGSG:2*aacG:1*agcN*caaA:1*gccT*ggcA:1*gatS:5*gccT:3+GLSGGNGGNGGN:2*accN:5*agaN:5*ctcV*ttcG*agcA*agcQ*ctcF+VPATSLP*gctT*ggcP*actN:2*actA:7*ggcS*accN:2*accA*ggtP:1*gccP*ggcA:2*ggcP:1*accP-ggt*tccT:1*ctgG:1*gcgN*accA:1*gcgS*acaQ:1*gcgI*gccG:1*cgcD*gccG:4*gtcD:2*agtK:2*cttD:1*tccA +NC_000962.3 miniprot mRNA 672401 675916 2103 - . ID=MP000220;Rank=1;Identity=0.4435;Positive=0.5004;Target=tr|Q6MWW9|Q6MWW9_MYCTU 1 984 +NC_000962.3 miniprot CDS 674847 675916 688 - 0 Parent=MP000220;Rank=1;Identity=0.4667;Target=tr|Q6MWW9|Q6MWW9_MYCTU 1 280 +NC_000962.3 miniprot CDS 672401 674630 1415 - 1 Parent=MP000220;Rank=1;Identity=0.4335;Target=tr|Q6MWW9|Q6MWW9_MYCTU 281 984 +##PAF tr|Q79FI8|Q79FI8_MYCTU 987 0 987 - NC_000962.3 699930 367244 375711 1311 3236 0 AS:i:1450 ms:i:1637 np:i:557 fs:i:3 st:i:0 da:i:0 do:i:1092 cg:Z:179M3I18M4I72M2623N169M2273N8M2F40M1I21M2I9M2G4M7D5M10D20M20D6M2D19M1D23M11I12M1I56M2I31M3D2M1G20M3D2M422V66M15D22M6D41M6D8M1D4M6D25M11D12M3I63M cs:Z::1*gatH*ttcY*gtgS:1*tcgL*gcgP:2*gtcI:2*ttaA*cggL*atgI*tatF*ctcA:11*gcgS:6*gacT:3*gtgS:2*tcgV*tggS:5*tcgA:2*gcgV*gatG*gcgG*gcgS:1*cgcQ:1*cccR*gcgS*gcgS:4*cgcA:1*gtaA:3*ctgA:3*attA*tcgA:1*acgA*gccT:6*gctT:2*cggQ:1*gccM:2*acgE:3*gcgV:1*gcaL:1*acgM:1*catQ:2*atcL:5*gccS*gtgG:1*gtgI:3*agcI:3*ctgF:1*ttcQ:7*accA:5*cggE:3*cagL:2*gccS:2*gttA*ggcA:2*gctS:4*gccV*gtcA*tccV:2*atgP*ccgA:1*accA*cagL*cagP:1*aagR*aagL*ctgP:3*tcgA+AGP*gagA*cggA*ctgV*accV*agcT:1*gcgL*gcaT*gccT:1*gccV:1*cccM:1*agcT*gcgF:2+RAIA*ttcA*aatS:7*gccG*aacG:1*gtgL:2*ggaA:1*gtcN:1*gtgL*ttcG:1*gtcI:1*ttcN*ggcA:3*agcN*tacN:3*tttS*gcaG:1*ctgF:2*gacF:1*ctgI:1*ttgS:5*cacN:3*tttI*gcgG:1*accA:1*agcA:2*gtcF:1*tttL*gggA:1*acgL:1*agcN*aacL:1~gt2623ac*atcT:4*accA:1*agcI*aacG:1*gtcF:1*tttI*gggA:3*agcN:2*gtcI:1*atcN:5*ggaN:3*ttcI:1*agcG*ttcL:3*agcN:2*atcV:4*tcgA:2*aacA:8*agcN:5*gcaG:3*agcN:1*aacS:2*atcL*ggaF:1*accP:1*aacH*accG:3*ctaF*ttcL:1*tccA:1*gacS*gtcF:3*gccM:1*aacD*ccgV:1*agcN*ttcA:6*accV:1*agcH*ttcY:1*accF:1*ggcA:4*aatP*accS:3*tacT*ctcF:1*attT:1*aacG*tacA:3*atcW*gccF:3*gacS*gttI*gacN:4*atcN*accI:1*aacD*tacM*agcN:4*ttaN*agcT:2*tacM*cagN*ggcN*ctgG:1*ggcF*ctcY*aacR*ctgG~gt2273ag*cacV*cagG*cacQ:1*cttS*gttL:1*ctcF-gg:1*acgI*gcaT*acaS:1*gcgD*gctL*tcaT*accL:1*gtaS*actL*tcaE*acaI:1*gcaG:2*ataV:2*gctF:1*acaL:2*gctI*tcaT*acgL*cggP*gtaS*acaL*ccaT*acaI:2*actV*tcaT:2+A*ggaN*actV:1*acaV*ccgG:1*tcgF*cgaD*ataL*cggP*gcgG*acgL*tcaT*gcaV:1*gcgS:1*tcaT*tctI:2+AM:1*acaP:1*acgN*gcaI*tctT*tgtV:1*gggA*gcF:1*tacL*cagP:1-ctgatcggttactcctacgcg:2*attV:1*gagS-attccggcgcacttggacgtcaatatccca*atcL*gacT:2*atcA:1*ggcT*agtT*ttcP*accA*gacN*ctcI*gtgT:1*gacG*aatA:1*actN*atcL:1-atcatcggcttcgaatccttcgcgtttagctttcacatccataccgagccggacatcggt*cccQ*atcL*attS*gtcI:2-ttcgtg*ctcV*agcT:2*acgP*ttcI*gcgT:1*gccP*gtgA:1*ggaT*cccA*acgL*accG:1*atcF:1*atcL-agc*gccP:1*gccL*ggcS*ctcI*ggcP*cccS*atcV:1*atcV:1*atcP:1*gacT:3*gcgG*ccgT*ggcT*atcV:1*aacG+FTLPTIHTPLI:2*accP*agcQ*ccgI:1*tcaI:1*ttcG:1*aacS:1+P:1*gccI*ggcA:1*gcaQ*tccA*gggN*ttcS:1*aacV*gtcI*ggcN*ggcL*aacP:1*tcgF*ggcS:1*tggN*aacG*cttI*gcgT*tcgI*gcaT*gccN*tcaL*ggaV:1*tcgF*ggcI*ttgP*ctcN:1*gtcI*ggcT:2*ggaQ*tcgT*ggtN*gtgM*gcgP*aatG:1*ggcF*aacP*accQ:1*tcgG:1*atcF*tacA:2*agcP:1+AF*ctgI*gacN*ctcT:2*ccgI*gccT*ttcV:1*tccG:1*ctcQ*gcaI:1*atcG*gccV:1*ctgF*ctgS*cagI:1*ggcA*gccI*ggcN*acgV:1*atcP*ctcF*gacT:1*gccP-ggcctcggc:1*ctcV*aV*atgI*tcgQ*gctP:1*caaS*accL*tcgG:1*gctI*ctaS*actV*tcgD:1*tcgF*ggaT*acaL:2*tctI:1-atgtcggtt*tcgT:1*acE~gt419ag-c*atcF*aacT:1*ggcP*agcA*ttcL*aacT*actI*ggcS*agcP*accI*aatG*accV:1*agcA*ttcL*aacS:1*ggcP:1*cacI*aacT:1*ggcQ*agcQ:1*aacT*tccT*ggtP*gacE*tacL*aacT*acgI*ggcD*tacP*ttcI*aacT*gcgL:1*gacG*tacF*aacT*acgL*ggtP*gtgQ*gccL*aacS*acgI*ggcP*aacA*gtcI*aacT:1*ggcP:2*atcT*tccI*ggcD*aatP*tacI*agcA*aacL:1*ttcG:1-tggcgaggtgactaccaggggttgattggcctttccacaacgatc:1*attL:1*gaaQ:1*cccM*tacT*cgcP*tacE*gacI*ttgT*agtT*gttP:1*atcF*gacA:1*cccD*atcP*accI:1*accL-gtcgtcgccaccacgcca*aacS*agtG:2*attL:1*ggtQ*ttcV*cagN:1*cgaP*gtcE*ttgI*cttT*ggtT:1*gcgE*gcgF*gtgT*cttI*gtcQ*aacP*gagV*atgG*atcL*ggcA*cccA*atcF:1*atcT*gatP*gtcA*aatL*caaT*gtcI*atcA*gccS:1*gatH*tcgL:1-attcagcaaaccatcagc*atgS*gttT*ggcT*accM:3*ggcA-ccg:2*atcA:1-atcagcatcggtggtacc:2*ttcY*ggcF:2*accS*accA*ggcT:2*tcgL:3*cacN*accA:1*gccI:1*catG*gtaN:3-gggaacttcggcgccggcaacatgtcgggctcc:2*ttcS:1*gctS:1*aatL:2*ttcW:2+TSP*gccV:1*ggcL:1*ggcA*aatG:2*ctaY*ctgQ:1*ttcY:1*gcgG:1*cagI:2*ctgF*gcgS:3*aacS*accG:3*gtcF*tacA:2*agcG:2*gacP*ctcF:1*acgV*cccT*gccS*ttcL*ggcV:2*atcL:4*gccN:2*gccS:3*ctcF*gacQ*aacS:1*ggcT*aacP +NC_000962.3 miniprot mRNA 367245 375711 1637 - . ID=MP000221;Rank=1;Identity=0.4051;Positive=0.5164;Frameshift=3;Target=tr|Q79FI8|Q79FI8_MYCTU 1 987 +NC_000962.3 miniprot CDS 374905 375711 754 - 0 Parent=MP000221;Rank=1;Identity=0.5797;Target=tr|Q79FI8|Q79FI8_MYCTU 1 276 +NC_000962.3 miniprot CDS 371775 372281 534 - 0 Parent=MP000221;Rank=1;Identity=0.5917;Acceptor=AC;Target=tr|Q79FI8|Q79FI8_MYCTU 277 445 +NC_000962.3 miniprot CDS 368523 369501 112 - 0 Parent=MP000221;Rank=1;Identity=0.2640;Frameshift=3;Target=tr|Q79FI8|Q79FI8_MYCTU 446 742 +NC_000962.3 miniprot CDS 367245 368103 237 - 1 Parent=MP000221;Rank=1;Identity=0.2976;Target=tr|Q79FI8|Q79FI8_MYCTU 743 987 +##PAF sp|L0T5V6|VPC51_MYCTU 137 0 137 - NC_000962.3 699930 274308 274719 411 411 0 AS:i:684 ms:i:684 np:i:137 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:137M cs:Z::137 +NC_000962.3 miniprot mRNA 274306 274719 684 - . ID=MP000222;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|L0T5V6|VPC51_MYCTU 1 137 +NC_000962.3 miniprot CDS 274306 274719 684 - 0 Parent=MP000222;Rank=1;Identity=1.0000;Target=sp|L0T5V6|VPC51_MYCTU 1 137 +NC_000962.3 miniprot stop_codon 274306 274308 0 - 0 Parent=MP000222;Rank=1 +##PAF tr|L7N658|L7N658_MYCTU 269 57 266 - NC_000962.3 699930 695673 696294 306 627 0 AS:i:526 ms:i:526 np:i:145 fs:i:0 st:i:0 da:i:129 do:i:3 cg:Z:89M2I118M cs:Z:*gagD*attV:1*ccgN*atcL*gagQ:1*cttI:1*gaaD*atgL:2*gtgL*cttI:2*tgcL:3*accS*ggcA*gccS:3*gtgL:1*gcaS:2*aacT:1*ctgA*tcgE:2*gctV:2*accL*gctP*ggcP:2*gccD:3*gcgT*gcgL*ttcY:2*cacD:1*gtgI:8*cgcK*aagR:1*attV*cgcD:3*ctgV*gtgL*gtcL*tcgL:5*tgtA*cacR:1*ctcV*ggcN:1+SP:3*acgG*ctgP*gatH*cgcA*cccN*ggcP*cgtN*ccaA*ctcA:1*ccgA*ctaI*ctgI:4*gcgI*aacA:1*attL:1*aaaR:2*accG:2*accQ*gaaQ*cggA:1*agtR:1*tggF:1*tttY:3*ggcD:6*gtgI:2*catT*cccA:2*cggL*gtcI*tgcA*ggcA:2*gtcI:1*gcgS*accA*agcA:1*ccgL:1*gccG*gagR:1*ctgT:1*ggcS*ctaI*cgtS*tatR:1*gccR*gagD*cggK*ctcV*gatG*gatA:2*cagA*ttcG:2*ctgI:1*accH*gccT*gcgG:1*gaaQ:1*accQ:3*ccaD*acgR:3*ttaV:1*gttI*agcD*acgI:2*gccS +NC_000962.3 miniprot mRNA 695674 696294 526 - . ID=MP000223;Rank=1;Identity=0.4880;Positive=0.6938;Target=tr|L7N658|L7N658_MYCTU 58 266 +NC_000962.3 miniprot CDS 695674 696294 526 - 0 Parent=MP000223;Rank=1;Identity=0.4880;Target=tr|L7N658|L7N658_MYCTU 58 266 +##PAF sp|O07244|GLPQ2_MYCTU 264 0 264 - NC_000962.3 699930 385175 385967 792 792 0 AS:i:1356 ms:i:1356 np:i:264 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:264M cs:Z::264 +NC_000962.3 miniprot mRNA 385173 385967 1356 - . ID=MP000224;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O07244|GLPQ2_MYCTU 1 264 +NC_000962.3 miniprot CDS 385173 385967 1356 - 0 Parent=MP000224;Rank=1;Identity=1.0000;Target=sp|O07244|GLPQ2_MYCTU 1 264 +NC_000962.3 miniprot stop_codon 385173 385175 0 - 0 Parent=MP000224;Rank=1 +##PAF tr|O53158|O53158_MYCTU 609 0 609 - NC_000962.3 699930 293800 295633 1185 1833 0 AS:i:1996 ms:i:1996 np:i:467 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:483M2D126M cs:Z:*gtgM*agcG:2*cggI*agcA:4*cagL*gttE:3*ttcL:3*ggcD*gtcI*gacG*aaaA*gctV:2*catT:1*gaaR*ttcY:2*gtcL:4*gccV:1*gacT*atgI:3*gtcA*agcA:6*gtgI:4*gtcG*gaaY*gggA:9*aaaN:3*gtgI*atgS*ctgV:1*gaaD*tcgE*ttcL*aaaA:1*tcaT:1*aacQ:1*atgI*ctgK:4*gacW*aagR*gtcL:1*atcL*gacA:1*gcaE*ctcI:4*atgA:1*aagP*gcaP*gtgL*gtcA:2*ctgV*catN:1*cacM:1*ttgY*ggcC:3*gcgS*gtaA*tggC*atgF*tacF*gccN*ggcL:1*gcgP*ggcV*ttcL:2*atcS:2*cacI*ctcE:1*accN*gagD:2*aagR*aagR:2*gtcA*ctaE*gccG*gccV*gaaQ:3*ggaQ*tcgA:15*gccG:4*gtcF*caaE:1*gccP:2*tccT:3*gacE:6*accS*tcgG:2*tccV:1*gacN*ctgT*ttcA:23*tacF*ttcY:2*aagN*ttcY:3*gtcP*gaaD:1*ggcF:1*cccL:1*gagA:4*ttcY:2*aacG*gtcL:7*gtcS:1*gcgP:4*gcgT:2*caaG*cacA*ggcD:3*aagV:1*tggY:3*gagG:9*gagT:3*cagH:3*atgT*gtcI:1*acgV:1*gccS*atcA*gcgG:10*cagA*tacF:2*tccE:20*acaM:25*accA:1*actA*ttcH:2*gcgD:3*gagQ*gtgR:1*cacS:1*gtgA:1*gccH*aagD*ttgM:1*gtcH*aagR:1*aacD:2*atgL:2*gtaI:7*cagR:2*gccE*aagI:14*cagV:3*atcL:21*caaL:10*aagH:1*gtgK:2*gcgQ*cacF:1*tcaL*ggcA:1*atcV*cagT*gagH*ttcT:1*gacE*agcN-ggtgct*ggcI*aacD*ggcP*cggS:2*accP*gaaQ*cgcA*gcgE:2*gccR*aagT:2*accD:1*gtcI*cagT*ggcA:1*gcgT*gccG:7*gccS:1*cagA:1*gacH*gtcS*accS*agcD*ctcI:9*ttcY:1*atgL*agcA:4*atcL:3*ttgR:1*cagL*cgtV*cagL:1*gcgG:2*gtgH:3*gacA*gcgD:1*gccP*accS*ggcQ*gacN*gagD*cggE*tccA:2*gaaR:2*gtcI:3*tcgA:5*ttcM:2*ctgK:2*agcG*accV:1*gagS:3*acgN*ctgI:1*aacD:3*gaaR*ctcV*gacP:1*gccD:2 +NC_000962.3 miniprot mRNA 293798 295633 1996 - . ID=MP000225;Rank=1;Identity=0.6465;Positive=0.7643;Target=tr|O53158|O53158_MYCTU 1 609 +NC_000962.3 miniprot CDS 293798 295633 1996 - 0 Parent=MP000225;Rank=1;Identity=0.6465;Target=tr|O53158|O53158_MYCTU 1 609 +NC_000962.3 miniprot stop_codon 293798 293800 0 - 0 Parent=MP000225;Rank=1 +##PAF sp|O53580|FAA32_MYCTU 637 44 618 + NC_000962.3 699930 484030 485695 639 1767 0 AS:i:780 ms:i:759 np:i:282 fs:i:0 st:i:0 da:i:54 do:i:36 cg:Z:43M3D140M6D23M1D26M3I2M1I12M1I143M5I72M3I1M1I8M20I13M2D7M3D50M cs:Z::1*tttY*gtgR:1*atgL:1*tacF*gacS:1*aaaE*accR*ggcD*gacG*caaV*attA*gacR*cgaD*atgI*acgL:2*caaD*ttaF*tatS*tctA:1*gtcN*accR:2*tctG:1*tatR:1*ataQ*agtQ*tatV*ggcT*cggQ*catP*gctG:2-cgaaggacc*gcaV:2*tcaL*gctC:2*ggtN:3*gttL*gcaI*ggaS:1*ctaF:3*tgcY*gccS:1*tggR*acgI*ccgA:3*ccaF*gaaD:1*ctgA*ggcE*agcP*ctaG*cgcH*gatV*aagG:1*actL*ggaH*ctgA*gctV*gtaL*ctcD:3*gccP*gacS*gtcT*gtgI:3*tcgT*caaD*gccS*gaaA*acgE*cggG:2*gccK*acgF:1*gctR*acaA*catR*gggS:1*tctK*gtaE*actR*acgP*ccgR:3*ttgV:1*acaA*ttgV*gacP*gagT*ccaE*tccV*ggaA*gatA*aacT*tgtW*gatQ*ctcQ*gatP*tctE*caaA*ctaN*tcaE*gacE*tggT*agtV*tcgA:9*gccR*aacI:1*cgtS:2*gttQ*ttaI*tccT*atgH*cgtL:1*gttL*acgP*gaaT:2*gacV:1*attV*atcL*cgtN*aacA*tatL*tttE*cgcG*catQ:2-ggcgcgccgaggttgccc*agcD*tcgR*gtcG:5*cttF*tacF:5*atgI*gttT*ggcV:1*tttL*attA*ccgS*ttgV-ttt*gtcL:1*tgtH*ccgS*gttF*atcT*ctgF*acgM*agcT:1*gagA:2*atcV:1*aagR:1*gccG:2*atgI*caaR*ctgE:2*aaaR+KPG*cacE*cagT+G*gcgG*ccaT:9*gatE+H*ttgA:2*gctR*aaaG*actV*tccP*gaaR*gagD:1*atgE*gcgP*gggP:3*ggcS*cacN:1*aatK*acaG:1*atcL:2*gcgS:1*cagP:1*cagS:1*aatA*acaS*ataM*accR:2*ctcF*cgcE*cggA:1*cgtA:2*aatG:1*atgK*cccQ*gcaT:7*atgL:3*gtgT*gttL*tacF*ctgV*gcgS:2*aagP*gcgM*ggaD*tcaE*cctV:2*tcaV*accI*gagH*ttcV:1*gctR:1*agcE:1*gctN*cgaN*ggcQ*cacR*gcgF*gagV*ctaE*agtV*actA*ttcA*gaaD*actA*gagP*cgtN:1*acgV*cgtA*ttaQ*ataV*cgcS*tacA*cacG*agcK*gacV*gacG*aagV*gaaS*ccgE*ttgW*cttA*cggV:3*ccgA:1*tcgT*aatA*atcS:2*ggaP*ccgD:1*cgtQ:5*attL:2*aagN:1*gtgL*tctG:3+WGKEE*cacE*aatS:1*gacQ*gacT*gcgF*ctcK:1*cgaI*gatL:1*ttcS*cagR*gccI:1*atcE*cggS*gagR:1*tctE*gcgG*ggaA*acgP*ccaD*aggD*tcgA*ccgL:1*cttV:4*ttgY:1*ttcT*ataY*gtaF*ggaK:1*gagH*ttcL:2*gtcA:2*atgI:3*attV:1*caaI:2*gtaR:4*gatQ:1*atcL:1*actC:1*gtcA*aagQ:1*tttS:1+KAL*ggtR+V:1*cggY*gtcA:5+PANQLPQTVFDDSHAGLKFD*tccP*gacE:1*gggT*gtgS:1*catQ:3*gcgV*gccG:1-gtaagg*actR*gagA*catA:1*cccT*gatH:1-gtgactatt*atgL:1*ttcH*tcgQ*acgP:1*aaaV*aggD*ctgD*gtcI*gtaR*tcgA:1*ttgI*tcgA*aaaV*ttaG:2*ctgV*catT:1*acaR:1*tttV:3*ccgS*cccA:1*gcgT*ctaI:1*aagR:1*accS:4*agcG:1*gcgR:2*gcaR*aagA*cagA:1 +NC_000962.3 miniprot mRNA 484031 485695 759 + . ID=MP000226;Rank=1;Identity=0.3616;Positive=0.4788;Target=sp|O53580|FAA32_MYCTU 45 618 +NC_000962.3 miniprot CDS 484031 485695 759 + 0 Parent=MP000226;Rank=1;Identity=0.3616;Target=sp|O53580|FAA32_MYCTU 45 618 +##PAF tr|O53668|O53668_MYCTU 436 0 436 + NC_000962.3 699930 296808 298116 1305 1308 0 AS:i:2148 ms:i:2148 np:i:436 fs:i:0 st:i:0 da:i:39 do:i:0 cg:Z:436M cs:Z:*gtgM:435 +NC_000962.3 miniprot mRNA 296809 298119 2148 + . ID=MP000227;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|O53668|O53668_MYCTU 1 436 +NC_000962.3 miniprot CDS 296809 298119 2148 + 0 Parent=MP000227;Rank=1;Identity=0.9977;Target=tr|O53668|O53668_MYCTU 1 436 +NC_000962.3 miniprot stop_codon 298117 298119 0 + 0 Parent=MP000227;Rank=1 +##PAF tr|O53671|O53671_MYCTU 273 0 273 - NC_000962.3 699930 300836 301655 819 819 0 AS:i:1507 ms:i:1507 np:i:273 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:273M cs:Z::273 +NC_000962.3 miniprot mRNA 300834 301655 1507 - . ID=MP000228;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53671|O53671_MYCTU 1 273 +NC_000962.3 miniprot CDS 300834 301655 1507 - 0 Parent=MP000228;Rank=1;Identity=1.0000;Target=tr|O53671|O53671_MYCTU 1 273 +NC_000962.3 miniprot stop_codon 300834 300836 0 - 0 Parent=MP000228;Rank=1 +##PAF tr|O53711|O53711_MYCTU 380 0 380 - NC_000962.3 699930 453232 454372 1140 1140 0 AS:i:1939 ms:i:1939 np:i:380 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:380M cs:Z::380 +NC_000962.3 miniprot mRNA 453230 454372 1939 - . ID=MP000229;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53711|O53711_MYCTU 1 380 +NC_000962.3 miniprot CDS 453230 454372 1939 - 0 Parent=MP000229;Rank=1;Identity=1.0000;Target=tr|O53711|O53711_MYCTU 1 380 +NC_000962.3 miniprot stop_codon 453230 453232 0 - 0 Parent=MP000229;Rank=1 +##PAF tr|O53726|O53726_MYCTU 311 0 311 - NC_000962.3 699930 527381 528314 933 933 0 AS:i:1610 ms:i:1610 np:i:311 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:311M cs:Z::311 +NC_000962.3 miniprot mRNA 527379 528314 1610 - . ID=MP000230;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53726|O53726_MYCTU 1 311 +NC_000962.3 miniprot CDS 527379 528314 1610 - 0 Parent=MP000230;Rank=1;Identity=1.0000;Target=tr|O53726|O53726_MYCTU 1 311 +NC_000962.3 miniprot stop_codon 527379 527381 0 - 0 Parent=MP000230;Rank=1 +##PAF tr|O53762|O53762_MYCTU 486 0 486 - NC_000962.3 699930 656012 657470 1458 1458 0 AS:i:2596 ms:i:2596 np:i:486 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:486M cs:Z::486 +NC_000962.3 miniprot mRNA 656010 657470 2596 - . ID=MP000231;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53762|O53762_MYCTU 1 486 +NC_000962.3 miniprot CDS 656010 657470 2596 - 0 Parent=MP000231;Rank=1;Identity=1.0000;Target=tr|O53762|O53762_MYCTU 1 486 +NC_000962.3 miniprot stop_codon 656010 656012 0 - 0 Parent=MP000231;Rank=1 +##PAF tr|O86342|O86342_MYCTU 206 0 206 - NC_000962.3 699930 329707 330325 615 618 0 AS:i:1058 ms:i:1058 np:i:206 fs:i:0 st:i:0 da:i:399 do:i:0 cg:Z:206M cs:Z:*gtgM:205 +NC_000962.3 miniprot mRNA 329705 330325 1058 - . ID=MP000232;Rank=1;Identity=0.9951;Positive=1.0000;Target=tr|O86342|O86342_MYCTU 1 206 +NC_000962.3 miniprot CDS 329705 330325 1058 - 0 Parent=MP000232;Rank=1;Identity=0.9951;Target=tr|O86342|O86342_MYCTU 1 206 +NC_000962.3 miniprot stop_codon 329705 329707 0 - 0 Parent=MP000232;Rank=1 +##PAF tr|P95224|P95224_MYCTU 463 0 463 + NC_000962.3 699930 321330 322719 1389 1389 0 AS:i:2402 ms:i:2402 np:i:463 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:463M cs:Z::463 +NC_000962.3 miniprot mRNA 321331 322722 2402 + . ID=MP000233;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P95224|P95224_MYCTU 1 463 +NC_000962.3 miniprot CDS 321331 322722 2402 + 0 Parent=MP000233;Rank=1;Identity=1.0000;Target=tr|P95224|P95224_MYCTU 1 463 +NC_000962.3 miniprot stop_codon 322720 322722 0 + 0 Parent=MP000233;Rank=1 +##PAF tr|P96258|P96258_MYCTU 439 0 439 - NC_000962.3 699930 498302 499619 1314 1317 0 AS:i:2167 ms:i:2167 np:i:439 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:439M cs:Z:*gtgM:438 +NC_000962.3 miniprot mRNA 498300 499619 2167 - . ID=MP000234;Rank=1;Identity=0.9977;Positive=1.0000;Target=tr|P96258|P96258_MYCTU 1 439 +NC_000962.3 miniprot CDS 498300 499619 2167 - 0 Parent=MP000234;Rank=1;Identity=0.9977;Target=tr|P96258|P96258_MYCTU 1 439 +NC_000962.3 miniprot stop_codon 498300 498302 0 - 0 Parent=MP000234;Rank=1 +##PAF tr|P96277|P96277_MYCTU 164 0 164 + NC_000962.3 699930 519072 519564 489 492 0 AS:i:799 ms:i:799 np:i:164 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:164M cs:Z:*gtgM:163 +NC_000962.3 miniprot mRNA 519073 519567 799 + . ID=MP000235;Rank=1;Identity=0.9939;Positive=1.0000;Target=tr|P96277|P96277_MYCTU 1 164 +NC_000962.3 miniprot CDS 519073 519567 799 + 0 Parent=MP000235;Rank=1;Identity=0.9939;Target=tr|P96277|P96277_MYCTU 1 164 +NC_000962.3 miniprot stop_codon 519565 519567 0 + 0 Parent=MP000235;Rank=1 +##PAF tr|P96400|P96400_MYCTU 442 0 442 + NC_000962.3 699930 260923 262249 1326 1326 0 AS:i:2302 ms:i:2302 np:i:442 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:442M cs:Z::442 +NC_000962.3 miniprot mRNA 260924 262252 2302 + . ID=MP000236;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96400|P96400_MYCTU 1 442 +NC_000962.3 miniprot CDS 260924 262252 2302 + 0 Parent=MP000236;Rank=1;Identity=1.0000;Target=tr|P96400|P96400_MYCTU 1 442 +NC_000962.3 miniprot stop_codon 262250 262252 0 + 0 Parent=MP000236;Rank=1 +##PAF sp|P9WH49|RS181_MYCTU 84 0 84 + NC_000962.3 699930 59121 59373 252 252 0 AS:i:426 ms:i:426 np:i:84 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:84M cs:Z::84 +NC_000962.3 miniprot mRNA 59122 59376 426 + . ID=MP000237;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WH49|RS181_MYCTU 1 84 +NC_000962.3 miniprot CDS 59122 59376 426 + 0 Parent=MP000237;Rank=1;Identity=1.0000;Target=sp|P9WH49|RS181_MYCTU 1 84 +NC_000962.3 miniprot stop_codon 59374 59376 0 + 0 Parent=MP000237;Rank=1 +##PAF sp|P9WHB1|RL28A_MYCTU 94 0 94 - NC_000962.3 699930 123982 124264 282 282 0 AS:i:482 ms:i:482 np:i:94 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:94M cs:Z::94 +NC_000962.3 miniprot mRNA 123980 124264 482 - . ID=MP000238;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WHB1|RL28A_MYCTU 1 94 +NC_000962.3 miniprot CDS 123980 124264 482 - 0 Parent=MP000238;Rank=1;Identity=1.0000;Target=sp|P9WHB1|RL28A_MYCTU 1 94 +NC_000962.3 miniprot stop_codon 123980 123982 0 - 0 Parent=MP000238;Rank=1 +##PAF sp|P9WHC1|RL22_MYCTU 197 97 185 + NC_000962.3 699930 566096 566363 108 285 0 AS:i:100 ms:i:83 np:i:42 fs:i:0 st:i:0 da:i:300 do:i:30 cg:Z:42M7D11M1I7M2I8M3I14M cs:Z::1*ggtA*gagQ*gccG*gctR*ctaA*gagF:1*ctgI:1*agcR*cagR*cagT:1*ttcH*gagI*gaaT:1*tcgV*gcgV*cgcE*gccS*gaaR*ggcP*tacA*gtgK:2*gcgR*gtgS*gagA*ttgK*accS*cagS*gagR:1*ttgR*ggtR:1*gtcE:2-cagacccgcgcggtcggtgag*cgtK:2*aagS*ctgK:2*atcA*gagT*ctgA:1+A:4*ccgA*gccK*aagA+PA:1*gccK:3*aagS*aagS*gccG+VKK*gctT:5*gcgP:7 +NC_000962.3 miniprot mRNA 566097 566363 83 + . ID=MP000239;Rank=1;Identity=0.3789;Positive=0.4421;Target=sp|P9WHC1|RL22_MYCTU 98 185 +NC_000962.3 miniprot CDS 566097 566363 83 + 0 Parent=MP000239;Rank=1;Identity=0.3789;Target=sp|P9WHC1|RL22_MYCTU 98 185 +##PAF sp|P9WHX1|PPE66_MYCTU 315 0 315 + NC_000962.3 699930 339642 340962 435 1077 0 AS:i:433 ms:i:499 np:i:188 fs:i:0 st:i:0 da:i:48 do:i:9 cg:Z:88M20D13M2D3M2D12M4D23M10D8M2D46M1I25M1D34M249U52M3D9M cs:Z:*gtgM*gccT*gcgT:2*acgA*accS:1*gtgL:6*gtcT:7*cttS:1*gggA:2*gtgL*gcgG:22*acgI:3*agcT:2*gcgS*accI:1*caaE*gcgG*gtcT*gccS*gagD:2*gtgL:10*ccgV*atcL*ttgF*gcaN*gccG*gaaG:1*gccG-gacgatgaccacgatcatgaccacgatcacgggggcgaaccgaccccgctggactatctg:2*gagS*ataA:1*cgcP*atcA:2*ggtA*gggA*cgcT:1-atctgg:3-gagggc*accS*atgI*aacI:2*ccgI*ttcI:1*gatI*tatL*acgI*gacQ-gcagcccaacca*atcL*tggF*tggL*gttI*gttS*cgtL*gccE:1*gaaL:1*agtA*aagI*gacV*tttA*gaaY:1*tttI*gttI*cagI*gaaV:1*tttI*gtcL-aatccggtggaggcatttcagttctacttt*gagP:1*ctaV*ttgI:1*gacA:1*ccgA-acccac:2*cagF*attA:1*gagL:1*ttgI*agcI*cagF*tccG:1*cagP:2*gcgV*gtcI:1*ctcS*ggtP*tccF:1*atcL*tccT*aacG*ttgS*ggtV*gcgI*gtgA*accV*gggP*ttcT*gccS*gggL*ctaS*tccT*ggcS:1*gccS*ggcT*atgA*cagV:1*gcgI*gctG*atcV+G*ccgQ*gcgY:2*cccD*gtcL:1*gcgS:1*ccgD*tcgA*acaQ*ttgA*ccgI*gcgE:1*gcgG*atgL*gccK*ccgT*accA*atgD*gccV:2-ggc*gcgV:2*gcgR*tcgP:4*gcgP*tccL*gcgR*ccgE*gcgS:1*agcA*acgV*gtgR*gccP*agcE:1*acgR*ccgL*gcaV*ccgS*ccgA*ccgV:2*ggcA*gccP:2*ttcT*gS~gc246ag-tc*acaA:1*acgV*gtgL:7*catV:7*cgcG*aggK:1*gcgS:1*gccG*gacR*gcgP:2*atgL:5*gatG*gatE:2*gacG*gggS:1*acgS*acgV:4*ggtA:2*gatE-ccggaccgg*gatQ*gcgL*cctV:1*tcgA*gcgG:1*cctA:1 +NC_000962.3 miniprot mRNA 339643 340962 499 + . ID=MP000240;Rank=1;Identity=0.4039;Positive=0.5237;Target=sp|P9WHX1|PPE66_MYCTU 1 315 +NC_000962.3 miniprot CDS 339643 340522 324 + 0 Parent=MP000240;Rank=1;Identity=0.3695;Donor=GC;Target=sp|P9WHX1|PPE66_MYCTU 1 253 +NC_000962.3 miniprot CDS 340769 340962 175 + 2 Parent=MP000240;Rank=1;Identity=0.5625;Target=sp|P9WHX1|PPE66_MYCTU 254 315 +##PAF sp|P9WIF3|PG34_MYCTU 515 0 515 - NC_000962.3 699930 333585 336310 918 1687 0 AS:i:1151 ms:i:1276 np:i:348 fs:i:1 st:i:0 da:i:0 do:i:81 cg:Z:96M1D26M2D15M9D36M1I8M2D46M6D7M345U34M4D12M13D28M4D7M711U32M1I13M1D15M1I15M1I54M1D11M1D28M1F5M1D10M2D11M cs:Z::4*attV:5*atcV*gcgV:3*acgS:3*agtG*ctcI:2*agcA:1*agcG:7*gccV*aacP:1*acgM*gcaG*ctgV*atgL:8*acaA:1*atcV:1*gcgD:5*ggcA:10*cagA*gcgL:2*gccE:3*cagH:1*ttgM:1*tccA:1*ggcA:4*gccG:4*gcgD*gtgA*tcgA-ccg*ctgA:2*ccgV*atcL:1*gagG*ttcP:1*ctgQ:1*aatL*accF:6*aacD:6-ggcacc:1*gccQ*aatP:2*gacP:2*tggL:1*atcY:4-gccggaggatccggcgcggccggcgtc:3*gccN:2*aacI:1*ggcQ*gccP:2*aacA:2*gccD*ggcA:7*gccN:2*gctI:2*gtcP*gccG*agcA*agtT:1*atcL+A:2*tccA:2*gccV:2-aacgcc*atgL:3*gccD:2*gccN:5*ggcL*gtaG*gtaT*gccG*ctcP*acgV:1*gggA*gccT:2*gccI:2*gctP:2*aacA:1*ggcV*ctgG:3*gccH*gccG:1*gtcA:5-ttcacgaacggcagtgca:2*gggK:2*ggcF:1*gG~gc342ag-gc:4*gccT:2*aacT*gctG:3*ttcY:1*tccN:2*tccN:2*gccN*ggcV*ggaP*ttcS:1*ttcA:4*caaA:2*cccD-gggggcaacgcc*ggcA*acgR*gtcL*ttcI:1*tccN:2*gccD:2*aacS-ggcggagttggccagggcttcgccggcgggatcggtggg*gctV:1*ggcA*accA:1*gggT*ctgG:11*gccW*agcL*gcgY*gtgG*accD:2*aacS:2-atcggcggcacc*ggcS*gtgT:1*atcQ:1*aatF*ggcS*gD~gt708ag-cc:2*aacT:3*ggcA:1*ctgM:2*actD:2*accN:2*gccF*ggcS*acgF*aacF*ttcD:1*gccN:2*aacD:2*aacT:2+T:1*ttcI:1*gccN:2*accD:2*gccN*gccS*ggcV*tcgQ-gga*gggT*tccD:1*atcF*accL*accR:1*ggcH:2*cacD:4+V:2*ctcI*tccG*ctcN:1*gccG*tccA:4*ggcS*agcA:1+T:1*gccV*agcF*tccA*cttP*gccG:2*gccS:2*accN:7*ttcV:1*ttcN*cgcG:4*gccS:2*cacP*ggcT*gggQ*gcaI*gcaP*cttS*accV*agcA*atcV*cagP*caaV*ggcT:4*gccT:5*ttgT*ctcA-ttc:1*tccL*gccI:1*gccN:2*gccN:2*agcA-ggt:1*aacG*gctV*ctaS:1*gccD:2*ggcP:4*gacN:2*cacY:1*gggQ*gtgL*ttcI:1*aacD:5-t*gccP:1*gggD*tttS:1-gcc:1*accP:5*gtcT:2-aacgcc*gtgT:1*atcA:1*aacQ*ggcN:1*aacS*ggcP:1*aacG +NC_000962.3 miniprot mRNA 333586 336310 1276 - . ID=MP000241;Rank=1;Identity=0.5442;Positive=0.6189;Frameshift=1;Target=sp|P9WIF3|PG34_MYCTU 1 515 +NC_000962.3 miniprot CDS 335548 336310 675 - 0 Parent=MP000241;Rank=1;Identity=0.6055;Donor=GC;Target=sp|P9WIF3|PG34_MYCTU 1 235 +NC_000962.3 miniprot CDS 334897 335205 173 - 2 Parent=MP000241;Rank=1;Identity=0.4369;Target=sp|P9WIF3|PG34_MYCTU 236 317 +NC_000962.3 miniprot CDS 333586 334188 428 - 2 Parent=MP000241;Rank=1;Identity=0.5213;Frameshift=1;Target=sp|P9WIF3|PG34_MYCTU 318 515 +##PAF sp|P9WKT1|Y502_MYCTU 358 0 358 + NC_000962.3 699930 592790 593864 1074 1074 0 AS:i:1842 ms:i:1842 np:i:358 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:358M cs:Z::358 +NC_000962.3 miniprot mRNA 592791 593867 1842 + . ID=MP000242;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKT1|Y502_MYCTU 1 358 +NC_000962.3 miniprot CDS 592791 593867 1842 + 0 Parent=MP000242;Rank=1;Identity=1.0000;Target=sp|P9WKT1|Y502_MYCTU 1 358 +NC_000962.3 miniprot stop_codon 593865 593867 0 + 0 Parent=MP000242;Rank=1 +##PAF sp|P9WKV7|Y479_MYCTU 348 0 348 - NC_000962.3 699930 567923 568967 1041 1044 0 AS:i:1780 ms:i:1780 np:i:348 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:348M cs:Z:*gtgM:347 +NC_000962.3 miniprot mRNA 567921 568967 1780 - . ID=MP000243;Rank=1;Identity=0.9971;Positive=1.0000;Target=sp|P9WKV7|Y479_MYCTU 1 348 +NC_000962.3 miniprot CDS 567921 568967 1780 - 0 Parent=MP000243;Rank=1;Identity=0.9971;Target=sp|P9WKV7|Y479_MYCTU 1 348 +NC_000962.3 miniprot stop_codon 567921 567923 0 - 0 Parent=MP000243;Rank=1 +##PAF sp|P9WM77|Y057_MYCTU 173 0 173 + NC_000962.3 699930 59895 60414 519 519 0 AS:i:908 ms:i:908 np:i:173 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:173M cs:Z::173 +NC_000962.3 miniprot mRNA 59896 60417 908 + . ID=MP000244;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WM77|Y057_MYCTU 1 173 +NC_000962.3 miniprot CDS 59896 60417 908 + 0 Parent=MP000244;Rank=1;Identity=1.0000;Target=sp|P9WM77|Y057_MYCTU 1 173 +NC_000962.3 miniprot stop_codon 60415 60417 0 + 0 Parent=MP000244;Rank=1 +##PAF sp|P9WMG9|Y043_MYCTU 244 0 244 - NC_000962.3 699930 47368 48100 732 732 0 AS:i:1267 ms:i:1267 np:i:244 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:244M cs:Z::244 +NC_000962.3 miniprot mRNA 47366 48100 1267 - . ID=MP000245;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMG9|Y043_MYCTU 1 244 +NC_000962.3 miniprot CDS 47366 48100 1267 - 0 Parent=MP000245;Rank=1;Identity=1.0000;Target=sp|P9WMG9|Y043_MYCTU 1 244 +NC_000962.3 miniprot stop_codon 47366 47368 0 - 0 Parent=MP000245;Rank=1 +##PAF sp|P9WMV3|GMHBA_MYCTU 190 0 190 + NC_000962.3 699930 137940 138510 570 570 0 AS:i:1009 ms:i:1009 np:i:190 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:190M cs:Z::190 +NC_000962.3 miniprot mRNA 137941 138513 1009 + . ID=MP000246;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMV3|GMHBA_MYCTU 1 190 +NC_000962.3 miniprot CDS 137941 138513 1009 + 0 Parent=MP000246;Rank=1;Identity=1.0000;Target=sp|P9WMV3|GMHBA_MYCTU 1 190 +NC_000962.3 miniprot stop_codon 138511 138513 0 + 0 Parent=MP000246;Rank=1 +##PAF sp|P9WQ59|FAA28_MYCTU 580 0 580 + NC_000962.3 699930 483976 485725 810 1767 0 AS:i:1223 ms:i:1223 np:i:353 fs:i:0 st:i:0 da:i:0 do:i:6 cg:Z:5M3I56M3D81M2I17M2D199M2D15M1D45M1D71M1I85M cs:Z::3*ataR:1+LPA*acgA:2*gacA*cgtC:1*accR*acgL*actQ:1*agcH:1*gaaP:2*gtgT:4*gacE*acaQ*aaaD*accW*ggcD*gacG*caaV*attA*gacI*cgaT*atgL:6*tctR:1*gtcT*accL*gccN:1*tctA*gcgQ*tatE:1*ataS*agtR*tatC:1*cggS*catT*gctG:2-cgaaggacc*gcaV*gcgV:7*gacE:2*gcaV*ggaA:5*tgcQ:2*tggR*acgI*ccgA:3*ccaS*gaaV:1*ctgQ:1*agcG*ctaV*cgcT:1*aagE:1*actS*ggaD*ctgS*gctV*gtaL*ctcS:1*tgtS*gccS*gccP*gacV*gtcA*gtgI:4*caaS:1*gaaV*acgD*cggD:1*aggV*gccQ*acgH*ataV:1*acaR*catR*gggP*gcgG*tctE*gtaS*actP*acgP*ccgS*gtcI:1*gcgE*ttgV:1+LL*acaD:2*gagA:1*tccN:1*gatY*aacT*tgtF*gatK*ctcE:1*tctE*caaY*ctaP:1-gactgg*agtT*tcgA:9*gccR*aacT:1*cgtA:3*ttaM:1*atgH*cgtQ:2*acgR*gaaV:1*gtcF*gacE:1*attL*atcM*cgtS*aacG:2*cgcA*catD*gagT*ggcD:1*gcgI:1*aggP*ttgP*cccN:1*tcgA*gtcL:5*cttF:6*atgV*gttI:1*ctcI*tttC*attA:1*ttgI*tttL*gtcG:1*tgtY:1*gttA*atcV:4*gagV*gcaS:1*atcL*cgtQ*aagR:5*caaH:1*cttM:1*aaaS*cacD*cagF*gcgH*ccaA:9*gatE:2*gtcA*gctR*aaaR:1*tccT*gaaD*gagD:4*ctgR:3*cacN*gtaI*aatL:2*atcL*aacS:1*gcgS:1*cagR:2*ccaA*aatA:2*accK*aaaR:1*ctcA*cgcD:2*cgtA*cccR*tacF:2*atgQ*cccE*gcaR*gcgV*gtcI*aagR:4*atgL:3*gtgT:2*ctgV:2*acgS:1*gcgP:1*tcaQ:2*acgE*tcaT*accV*gagD:2*gctT*gatE:2*gctS*cgaA:3*gagK-ctaagt*actP*ttcC*gaaA*actG*gagG*cgtG:2*cgtS:2*cgcS:1*cacM*agcL-gac*gacP*aagR*gaaS:1*ttgI*cttV:4*ccgS:1*tcgT*aatC:2*ctcC*ggaP*ccgD:1*cgtT*atcV:4*attV:2*aagD:2*tctA*accN:2*cacW*aatQ*gcaK*gacP:1*gcgE*ctcS*aatE:1-gat*aagT:1*cagG*gccG*agcK:1*cggV*gagT*gccP:1*gcgP:3*aggE*tcgG:7*ttgS:2*ataV*gtaT*ggaD*gatG*gagK*ttcM*tacF:1*gtcI:2*atgI:3*attL:1*caaV*gacY:1*gtaR:2*tatS:5*actA:1*gtcI*aagQ:1*tttI:1*ggtR:2*gtcC:2*tttI:2+P*tccG:1*gacR*gggS*gtgT:1*catK:2*attA*gcgI*gccI:1*gtaL*aggK*actK*gagR*catG*gggD*cccS:1*aaaQ*gtgD*actA*attM*atgA*gatR*ttcL*tcgG*acgA:3*ctgE:1*gtaT:4*aaaS*ttaS:3*catS:1*acaA:1*tttL*cttV:2*ccgA:2*gcgS*ctaI:1*aagI:5*attV*agcR:1*gcgG:2*gcaV*aagE:2*ggaR*gcaQ*aatD*aagQ*ttgF*caaA:1*gtaL*gcaD*acgA +NC_000962.3 miniprot mRNA 483977 485725 1223 + . ID=MP000247;Rank=1;Identity=0.4584;Positive=0.5993;Target=sp|P9WQ59|FAA28_MYCTU 1 580 +NC_000962.3 miniprot CDS 483977 485725 1223 + 0 Parent=MP000247;Rank=1;Identity=0.4584;Target=sp|P9WQ59|FAA28_MYCTU 1 580 +##PAF sp|P9WQN9|A85C_MYCTU 340 0 340 - NC_000962.3 699930 156580 157600 1020 1020 0 AS:i:1840 ms:i:1840 np:i:340 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:340M cs:Z::340 +NC_000962.3 miniprot mRNA 156578 157600 1840 - . ID=MP000248;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WQN9|A85C_MYCTU 1 340 +NC_000962.3 miniprot CDS 156578 157600 1840 - 0 Parent=MP000248;Rank=1;Identity=1.0000;Target=sp|P9WQN9|A85C_MYCTU 1 340 +NC_000962.3 miniprot stop_codon 156578 156580 0 - 0 Parent=MP000248;Rank=1 +##PAF tr|Q79G13|Q79G13_MYCTU 380 0 380 + NC_000962.3 699930 65551 66691 1140 1140 0 AS:i:2002 ms:i:2002 np:i:380 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:380M cs:Z::380 +NC_000962.3 miniprot mRNA 65552 66694 2002 + . ID=MP000249;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|Q79G13|Q79G13_MYCTU 1 380 +NC_000962.3 miniprot CDS 65552 66694 2002 + 0 Parent=MP000249;Rank=1;Identity=1.0000;Target=tr|Q79G13|Q79G13_MYCTU 1 380 +NC_000962.3 miniprot stop_codon 66692 66694 0 + 0 Parent=MP000249;Rank=1 +##PAF tr|I6X961|I6X961_MYCTU 174 0 174 + NC_000962.3 699930 552025 552547 519 522 0 AS:i:923 ms:i:923 np:i:174 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:174M cs:Z:*gtgM:173 +NC_000962.3 miniprot mRNA 552026 552550 923 + . ID=MP000250;Rank=1;Identity=0.9943;Positive=1.0000;Target=tr|I6X961|I6X961_MYCTU 1 174 +NC_000962.3 miniprot CDS 552026 552550 923 + 0 Parent=MP000250;Rank=1;Identity=0.9943;Target=tr|I6X961|I6X961_MYCTU 1 174 +NC_000962.3 miniprot stop_codon 552548 552550 0 + 0 Parent=MP000250;Rank=1 +##PAF tr|I6XUD2|I6XUD2_MYCTU 159 0 159 + NC_000962.3 699930 89923 90400 477 477 0 AS:i:823 ms:i:823 np:i:159 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:159M cs:Z::159 +NC_000962.3 miniprot mRNA 89924 90403 823 + . ID=MP000251;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|I6XUD2|I6XUD2_MYCTU 1 159 +NC_000962.3 miniprot CDS 89924 90403 823 + 0 Parent=MP000251;Rank=1;Identity=1.0000;Target=tr|I6XUD2|I6XUD2_MYCTU 1 159 +NC_000962.3 miniprot stop_codon 90401 90403 0 + 0 Parent=MP000251;Rank=1 +##PAF tr|I6Y340|I6Y340_MYCTU 337 0 337 + NC_000962.3 699930 258912 259923 1008 1011 0 AS:i:1769 ms:i:1769 np:i:337 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:337M cs:Z:*gtgM:336 +NC_000962.3 miniprot mRNA 258913 259926 1769 + . ID=MP000252;Rank=1;Identity=0.9970;Positive=1.0000;Target=tr|I6Y340|I6Y340_MYCTU 1 337 +NC_000962.3 miniprot CDS 258913 259926 1769 + 0 Parent=MP000252;Rank=1;Identity=0.9970;Target=tr|I6Y340|I6Y340_MYCTU 1 337 +NC_000962.3 miniprot stop_codon 259924 259926 0 + 0 Parent=MP000252;Rank=1 +##PAF tr|O07173|O07173_MYCTU 122 0 122 + NC_000962.3 699930 148855 149221 366 366 0 AS:i:601 ms:i:601 np:i:122 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:122M cs:Z::122 +NC_000962.3 miniprot mRNA 148856 149224 601 + . ID=MP000253;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07173|O07173_MYCTU 1 122 +NC_000962.3 miniprot CDS 148856 149224 601 + 0 Parent=MP000253;Rank=1;Identity=1.0000;Target=tr|O07173|O07173_MYCTU 1 122 +NC_000962.3 miniprot stop_codon 149222 149224 0 + 0 Parent=MP000253;Rank=1 +##PAF tr|O07254|O07254_MYCTU 246 0 246 - NC_000962.3 699930 395349 396087 738 738 0 AS:i:1232 ms:i:1232 np:i:246 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:246M cs:Z::246 +NC_000962.3 miniprot mRNA 395347 396087 1232 - . ID=MP000254;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07254|O07254_MYCTU 1 246 +NC_000962.3 miniprot CDS 395347 396087 1232 - 0 Parent=MP000254;Rank=1;Identity=1.0000;Target=tr|O07254|O07254_MYCTU 1 246 +NC_000962.3 miniprot stop_codon 395347 395349 0 - 0 Parent=MP000254;Rank=1 +##PAF tr|O53715|O53715_MYCTU 183 0 183 - NC_000962.3 699930 456270 456819 546 549 0 AS:i:951 ms:i:951 np:i:183 fs:i:0 st:i:0 da:i:99 do:i:0 cg:Z:183M cs:Z:*gtgM:182 +NC_000962.3 miniprot mRNA 456268 456819 951 - . ID=MP000255;Rank=1;Identity=0.9945;Positive=1.0000;Target=tr|O53715|O53715_MYCTU 1 183 +NC_000962.3 miniprot CDS 456268 456819 951 - 0 Parent=MP000255;Rank=1;Identity=0.9945;Target=tr|O53715|O53715_MYCTU 1 183 +NC_000962.3 miniprot stop_codon 456268 456270 0 - 0 Parent=MP000255;Rank=1 +##PAF sp|O53779|VPC26_MYCTU 135 0 135 + NC_000962.3 699930 677921 678326 402 405 0 AS:i:667 ms:i:667 np:i:135 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:135M cs:Z:*gtgM:134 +NC_000962.3 miniprot mRNA 677922 678329 667 + . ID=MP000256;Rank=1;Identity=0.9926;Positive=1.0000;Target=sp|O53779|VPC26_MYCTU 1 135 +NC_000962.3 miniprot CDS 677922 678329 667 + 0 Parent=MP000256;Rank=1;Identity=0.9926;Target=sp|O53779|VPC26_MYCTU 1 135 +NC_000962.3 miniprot stop_codon 678327 678329 0 + 0 Parent=MP000256;Rank=1 +##PAF sp|P0CW29|VAPB1_MYCTU 79 0 79 + NC_000962.3 699930 71588 71825 237 237 0 AS:i:381 ms:i:381 np:i:79 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:79M cs:Z::79 +NC_000962.3 miniprot mRNA 71589 71828 381 + . ID=MP000257;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P0CW29|VAPB1_MYCTU 1 79 +NC_000962.3 miniprot CDS 71589 71828 381 + 0 Parent=MP000257;Rank=1;Identity=1.0000;Target=sp|P0CW29|VAPB1_MYCTU 1 79 +NC_000962.3 miniprot stop_codon 71826 71828 0 + 0 Parent=MP000257;Rank=1 +##PAF tr|P95197|P95197_MYCTU 419 0 419 + NC_000962.3 699930 468334 469591 1254 1257 0 AS:i:2107 ms:i:2107 np:i:419 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:419M cs:Z:*gtgM:418 +NC_000962.3 miniprot mRNA 468335 469594 2107 + . ID=MP000258;Rank=1;Identity=0.9976;Positive=1.0000;Target=tr|P95197|P95197_MYCTU 1 419 +NC_000962.3 miniprot CDS 468335 469594 2107 + 0 Parent=MP000258;Rank=1;Identity=0.9976;Target=tr|P95197|P95197_MYCTU 1 419 +NC_000962.3 miniprot stop_codon 469592 469594 0 + 0 Parent=MP000258;Rank=1 +##PAF tr|P96265|P96265_MYCTU 498 0 498 + NC_000962.3 699930 505085 506579 1494 1494 0 AS:i:2589 ms:i:2589 np:i:498 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:498M cs:Z::498 +NC_000962.3 miniprot mRNA 505086 506582 2589 + . ID=MP000259;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96265|P96265_MYCTU 1 498 +NC_000962.3 miniprot CDS 505086 506582 2589 + 0 Parent=MP000259;Rank=1;Identity=1.0000;Target=tr|P96265|P96265_MYCTU 1 498 +NC_000962.3 miniprot stop_codon 506580 506582 0 + 0 Parent=MP000259;Rank=1 +##PAF sp|P9WG75|THIE_MYCTU 222 0 222 - NC_000962.3 699930 500352 501018 663 666 0 AS:i:1129 ms:i:1129 np:i:222 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:222M cs:Z:*gtgM:221 +NC_000962.3 miniprot mRNA 500350 501018 1129 - . ID=MP000260;Rank=1;Identity=0.9955;Positive=1.0000;Target=sp|P9WG75|THIE_MYCTU 1 222 +NC_000962.3 miniprot CDS 500350 501018 1129 - 0 Parent=MP000260;Rank=1;Identity=0.9955;Target=sp|P9WG75|THIE_MYCTU 1 222 +NC_000962.3 miniprot stop_codon 500350 500352 0 - 0 Parent=MP000260;Rank=1 +##PAF sp|P9WGJ3|SERB1_MYCTU 308 0 308 - NC_000962.3 699930 595466 596390 924 924 0 AS:i:1555 ms:i:1555 np:i:308 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:308M cs:Z::308 +NC_000962.3 miniprot mRNA 595464 596390 1555 - . ID=MP000261;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WGJ3|SERB1_MYCTU 1 308 +NC_000962.3 miniprot CDS 595464 596390 1555 - 0 Parent=MP000261;Rank=1;Identity=1.0000;Target=sp|P9WGJ3|SERB1_MYCTU 1 308 +NC_000962.3 miniprot stop_codon 595464 595466 0 - 0 Parent=MP000261;Rank=1 +##PAF sp|P9WI47|PPE02_MYCTU 556 0 556 - NC_000962.3 699930 307879 309547 1668 1668 0 AS:i:2882 ms:i:2882 np:i:556 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:556M cs:Z::556 +NC_000962.3 miniprot mRNA 307877 309547 2882 - . ID=MP000262;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WI47|PPE02_MYCTU 1 556 +NC_000962.3 miniprot CDS 307877 309547 2882 - 0 Parent=MP000262;Rank=1;Identity=1.0000;Target=sp|P9WI47|PPE02_MYCTU 1 556 +NC_000962.3 miniprot stop_codon 307877 307879 0 - 0 Parent=MP000262;Rank=1 +##PAF sp|P9WJY1|Y037_MYCTU 441 0 441 - NC_000962.3 699930 39879 41202 1320 1323 0 AS:i:2207 ms:i:2207 np:i:441 fs:i:0 st:i:0 da:i:207 do:i:0 cg:Z:441M cs:Z:*gtgM:440 +NC_000962.3 miniprot mRNA 39877 41202 2207 - . ID=MP000263;Rank=1;Identity=0.9977;Positive=1.0000;Target=sp|P9WJY1|Y037_MYCTU 1 441 +NC_000962.3 miniprot CDS 39877 41202 2207 - 0 Parent=MP000263;Rank=1;Identity=0.9977;Target=sp|P9WJY1|Y037_MYCTU 1 441 +NC_000962.3 miniprot stop_codon 39877 39879 0 - 0 Parent=MP000263;Rank=1 +##PAF sp|P9WLQ5|Y1945_MYCTU 454 0 454 - NC_000962.3 699930 103715 105101 900 1387 0 AS:i:1506 ms:i:1506 np:i:352 fs:i:2 st:i:0 da:i:0 do:i:3 cg:Z:97M2G38M1F194M8D124M cs:Z::1*ttaR*gcgS*aatD*agcT:3*cttI*gtcS*gagA*gtcA*ttcL:2*ctgY*gatH:1*gacS:1*gacS:1*ttgV*gacL*gagD*gtgL*tccK*tttC*gagD*gtgA:1*agcT:3*cggL:1*cggA*tctC:1*gaaQ:3*tgcV*ttgE*gcgR:2*ctaQ*ccgG:2*cagE:1*acgA:5*gacA*accG:2*agcC:8*tgcR*tgcT:6*cgcH:2*aagP*cccG:2*ggcS:2*agcI:3*aagE*ccD:2*caaE:9*gccP*ccgA:6*accA:3*cagE:1*ctgK:2*gagR*gcgE:1*gtcI:1*gtgE:1*cgcQ:1-c:2*gccK*cacE:1*cccS:4*gtgL*tccG*accI:1*cagE:4*gacQ:2*ggcE*aaaL:1*gctT*caaS*tatR:3*gagH:1*gccH*cgcG*tacL:1*cagT*cggQ*gtcL:8*gacN*ctcF*accS:1*accQ:9*ctgM*agcG*aacK:1*caaE*tacF:5*ctaI:2*tacL:3*caaE*gcgL:3*tttI:12*accC:4*cacQ:3*atcV:1*accD:4*gccD:1*atcV*gacR:9*aacH:9*gcgG:1*atcL:3*aaaE:4*aacR:4*tcgT*atcV:2*accS:3*accK*gacE:1*caaE*accA*ggcA*gccT:3*ttcV:4*accS*ctgR*ctaV:2*gccS:1*gtgL:3*accA:1*cacN:4-tcccccgcaagcgggaggtacccc*cagL:1*atcL:2*cacG*ggcA*acaK:19*ttcY:1*aacK:4*accS*aaaR:10*caaE*gccV:4*gccP:2*agcT:1*ggaH:4*accN*gagD:11*gccV:4*accK:1*cacR*aacK:1*accA*cacK:1*cacD:6*cccA:8*accI:1*accR*ttcY:4*cgaK*ttcI:1*cacC*aacE*caaP:3*gacE*aaaP*cccH +NC_000962.3 miniprot mRNA 103716 105101 1506 - . ID=MP000264;Rank=1;Identity=0.6489;Positive=0.7614;Frameshift=2;Target=sp|P9WLQ5|Y1945_MYCTU 1 454 +NC_000962.3 miniprot CDS 103716 105101 1506 - 0 Parent=MP000264;Rank=1;Identity=0.6489;Frameshift=2;Target=sp|P9WLQ5|Y1945_MYCTU 1 454 +##PAF sp|P9WM93|Y034_MYCTU 131 0 131 + NC_000962.3 699930 36866 37259 393 393 0 AS:i:659 ms:i:659 np:i:131 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:131M cs:Z::131 +NC_000962.3 miniprot mRNA 36867 37262 659 + . ID=MP000265;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WM93|Y034_MYCTU 1 131 +NC_000962.3 miniprot CDS 36867 37262 659 + 0 Parent=MP000265;Rank=1;Identity=1.0000;Target=sp|P9WM93|Y034_MYCTU 1 131 +NC_000962.3 miniprot stop_codon 37260 37262 0 + 0 Parent=MP000265;Rank=1 +##PAF sp|P9WPB3|CMAS3_MYCTU 287 0 287 - NC_000962.3 699930 560850 561711 861 861 0 AS:i:1524 ms:i:1524 np:i:287 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:287M cs:Z::287 +NC_000962.3 miniprot mRNA 560848 561711 1524 - . ID=MP000266;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WPB3|CMAS3_MYCTU 1 287 +NC_000962.3 miniprot CDS 560848 561711 1524 - 0 Parent=MP000266;Rank=1;Identity=1.0000;Target=sp|P9WPB3|CMAS3_MYCTU 1 287 +NC_000962.3 miniprot stop_codon 560848 560850 0 - 0 Parent=MP000266;Rank=1 +##PAF sp|P9WPM5|CP137_MYCTU 476 38 476 - NC_000962.3 699930 392731 394024 453 1323 0 AS:i:577 ms:i:577 np:i:220 fs:i:0 st:i:0 da:i:21 do:i:33 cg:Z:13M7I32M1D137M1D7M3I211M1D28M cs:Z::1*ctgG:3*ccgL*cggP*ctaA:2*tacG*ctgF*cagR+AAFAAAY*agcA:1*ctgA:2*aggA*tttG*cggG:1*tggR*ttcR*ctgM*ccaL*gcgR*atgL*catI:1*aagR:2*gacP*gtgI*ttcM*tccT*ttgM*cggP*gtgI*cccL*ccaS*tatL*gccG:1-aac*ctcV*gtgA*gtcI*tatV*accS*cgcD*cccS*gaaA*cacL*atcA:2*atcV:1*gcgT:1*gacP*ccgT*aggD*tcgV:1*cacL*gcgG:3*aacV*cacG*atcP*cttA*ggtA*tttA*gtcI*atgY:1*gagS*cacG:1*gtaM*ttgF*atgV*accQ*gacE:1*gccP:2*gcgL:1*atgR:1*tcgK:2*atgT:1*gcgP*ttcL*accH*cgcG:3*cgcD*ggaR:1*cgcV*gacP*atgI:1*gccE*tccN*gttS*gcgT:1*gaaA*cacA*atcM*acgH*cgcT:1*cggP*cccV*cacD*gcaR*acgP*atcF*aacA*agtM:1*gacT*cacV*atgA*aatR*gcgS:1*accM:2*atcV:1*ctgV*cggK:1*gttI:3*actD:2*aaaE*gtcE*aagV*gccR*gagR:1*actG*agtR*cggP*ctgF*caaE*cagR*atcL*ataL:1*atcL*catG*cccV*gcgS*attE*ctcQ*gcgL*ggcT:1*ccgR:1-ccg*tcgA:1*aagR:1*atgL*aatG*cccA+LRV:1*aagP*cgcA*ttcR*ttcA*catR*aacA*caaN:1*aagE:2*gagD*atcV*ctcV*tacM*cgcA*gagL:2*tccQ:2*atcA:1*tccP*gatR:1*accG*gccE:1*accH:4*agaL:1*ttgV*caaS*accA*aagR*gacG*acgE*cctS*actG*aagE*ccgQ:1*accS:1*gccS:1*cttI:2*cagD:4*ctgV:8*gccT*gccT:1*tccA:1*acgA*ttgF*tggD*gaaL:1*gccL:1*gctH:1*gaaD*atcA*caaL*agcR*caaR:1*gtcR*tggA*gctE:4*gacG*gacE*ggaA:1*ttgT*gagT:2*ctcI*aagN:1*ggaT*atgL:1*cgaV*cacR*accP*gtcP*atcA*gctP*tctL:3*aagV*gtcA*accA*gcgQ:1*gcaL*gagT:3*tggY:1*ctgV*ccaE:3*gtgR*gtcI*aacV*acgV*tcgH:1*ctgI*ttgA*gccI*cacN*gccR:1*gagA*gtaE*tcgV*cacY*cccE*aaaH:1*acaH:4*agcE:3*gacG*ggcT*agcR*gtgP*gcaQ*cccT*aacY*accA:1*ctgV:6*cgcK:4*ttcA*gggN:1*gccS*ctcM*accR:1*ggaL*gcgI*gtcT*atcV:1*caaH*gagV*attL*ttcL:1*cgcE*ttcG*accE*atcF:2*gccV-ggc*ccgD*tccD*aaaE*ggcP:1*actR*ccgI*ttgV*gtgR:1*aacS:1*accM*accL:2*aaaR*cacR:1*gcaT*cacR*ctgV:1*ctgF*atcR:1*cagA:1 +NC_000962.3 miniprot mRNA 392732 394024 577 - . ID=MP000267;Rank=1;Identity=0.3424;Positive=0.4989;Target=sp|P9WPM5|CP137_MYCTU 39 476 +NC_000962.3 miniprot CDS 392732 394024 577 - 0 Parent=MP000267;Rank=1;Identity=0.3424;Target=sp|P9WPM5|CP137_MYCTU 39 476 +##PAF sp|P9WQJ9|IRTA_MYCTU 859 599 841 + NC_000962.3 699930 227846 230402 366 750 0 AS:i:511 ms:i:570 np:i:160 fs:i:0 st:i:0 da:i:87 do:i:57 cg:Z:145M1D20M1809V7D76M cs:Z:*aagE:2*tcgD*ccgG:2*cggP*ttaA*tcaT*ctgV*gagV:1*cagD*cggH:1*tccT:3*gtgR*gctP*gacG*cgcV:2*ctcI*cgcQ*gagD*ataV:2*tcgT*gtcL:1*gccP:1*gagT*accV*ctgT:1*gtgL:2*gcgP*ccgS:8*tcgT:1*gcgL*acgA:1*tgcF*tacH:2*acaE*cagR:2*gtgI:1*atcV:4*gtgI:1*gagS:1*acgA*ctcA:1*tcgE:1*cggY*tcaT*gccR*atcV:1*ctgF:1*cccL*gaaQ*gatE:1*gtcQ:1*ttcV*tccH:2*atcA*ggtA*gcaE:3*tatL*ggcA*cgcV:3*acgP*cccA:2*attV*gccQ*acgV:3*gcgE:1*cacQ:1*gagH*gagD*ttcR:1*aacL*actR:5*cagD:1*gccV*gtcL:2*cgcN*ggaS-ctg*acgG:4*caaE:3*atcL*gccT*ctgI:3*ctaI:1*cacG*cagD*ccgT*cgP~gt1806ag-g-gcgcgtctggttgaccccgac*attV:1*ctgI:5*gtgA*gccF*ctgA:2*gccE*accS:1*gccY*gtgL:2*cggQ:1*accL*ctcN*accR:1*gcaT*gccR*cgtD:2*accV:1*atcV*gtgI:2*gggR:1*gccH*atcT*gccI*gaaT*cacR:2*cgcQ:4*gagD:2*accR*gttI:2*gacR:1*gccT:1*accE:7*cacR:1*tcgC:3 +NC_000962.3 miniprot mRNA 227847 230402 570 + . ID=MP000268;Rank=1;Identity=0.4880;Positive=0.6400;Target=sp|P9WQJ9|IRTA_MYCTU 600 841 +NC_000962.3 miniprot CDS 227847 228346 378 + 0 Parent=MP000268;Rank=1;Identity=0.4790;Target=sp|P9WQJ9|IRTA_MYCTU 600 764 +NC_000962.3 miniprot CDS 230153 230402 192 + 1 Parent=MP000268;Rank=1;Identity=0.5060;Target=sp|P9WQJ9|IRTA_MYCTU 765 841 +##PAF tr|Q6MX19|Q6MX19_MYCTU 28 0 28 + NC_000962.3 699930 349623 349707 81 84 0 AS:i:122 ms:i:122 np:i:27 fs:i:0 st:i:0 da:i:0 do:i:222 cg:Z:28M cs:Z::3*cgaS:24 +NC_000962.3 miniprot mRNA 349624 349707 122 + . ID=MP000269;Rank=1;Identity=0.9643;Positive=0.9643;Target=tr|Q6MX19|Q6MX19_MYCTU 1 28 +NC_000962.3 miniprot CDS 349624 349707 122 + 0 Parent=MP000269;Rank=1;Identity=0.9643;Target=tr|Q6MX19|Q6MX19_MYCTU 1 28 +##PAF tr|Q79FJ0|Q79FJ0_MYCTU 57 0 57 + NC_000962.3 699930 171709 171880 117 171 0 AS:i:198 ms:i:198 np:i:43 fs:i:0 st:i:0 da:i:-1 do:i:285 cg:Z:57M cs:Z:*gccM:1*gcgP:4*gacR:3*gccT*gcgP:1*ataR*gctQ:4*ggcP*accN:2*actS:8*cccA*tacF:2*ggcP:2*gcgQ:3*ttcL:1*atgN*gtcI:8*cagR +NC_000962.3 miniprot mRNA 171710 171880 198 + . ID=MP000270;Rank=1;Identity=0.6842;Positive=0.7544;Target=tr|Q79FJ0|Q79FJ0_MYCTU 1 57 +NC_000962.3 miniprot CDS 171710 171880 198 + 0 Parent=MP000270;Rank=1;Identity=0.6842;Target=tr|Q79FJ0|Q79FJ0_MYCTU 1 57 +##PAF sp|I6Y8K5|PG08_MYCTU 175 0 175 - NC_000962.3 699930 335800 336310 402 525 0 AS:i:625 ms:i:617 np:i:144 fs:i:0 st:i:0 da:i:0 do:i:2361 cg:Z:92M2I2M2I58M1I18M cs:Z::9*gttA:10*ctcI:2*agcT:1*agcG:12*ctgV*atgL:5*gagQ:2*acaV:4*ctgA:15*cagA*gcgT:2*gccI:7*tccA:1*ggcA:1*gccS:6+AS:2+SI*gtgT:5*ccgA:2*gagA*ttcP:3*aatA*accL:9*aacD:7*aatA:2*gacA:2*tggL:1*atcF:10*gccP:1*gtcG*aacA:2+L*gccL*ggcF:7*aacP:1*ggcA*gccS:2*ctcA*atcL:1 +NC_000962.3 miniprot mRNA 335801 336310 617 - . ID=MP000271;Rank=1;Identity=0.7657;Positive=0.8229;Target=sp|I6Y8K5|PG08_MYCTU 1 175 +NC_000962.3 miniprot CDS 335801 336310 617 - 0 Parent=MP000271;Rank=1;Identity=0.7657;Target=sp|I6Y8K5|PG08_MYCTU 1 175 +##PAF tr|L0T3X8|L0T3X8_MYCTU 594 0 594 + NC_000962.3 699930 622792 624574 1782 1782 0 AS:i:3163 ms:i:3163 np:i:594 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:594M cs:Z::594 +NC_000962.3 miniprot mRNA 622793 624577 3163 + . ID=MP000272;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L0T3X8|L0T3X8_MYCTU 1 594 +NC_000962.3 miniprot CDS 622793 624577 3163 + 0 Parent=MP000272;Rank=1;Identity=1.0000;Target=tr|L0T3X8|L0T3X8_MYCTU 1 594 +NC_000962.3 miniprot stop_codon 624575 624577 0 + 0 Parent=MP000272;Rank=1 +##PAF tr|L0TCB8|L0TCB8_MYCTU 588 0 588 + NC_000962.3 699930 149532 363106 1020 2010 0 AS:i:1379 ms:i:1432 np:i:388 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:91M1I31M1D24M2I83M6D30M1D17M7D15M6I14M2D16M1D2M211615N9M4D6M1I16M2D8M12D21M4I36M33D64M12D23M1I32M2I19M1D14M cs:Z::4*agcV*gtaA*gccV:2*attA*gtgL*gtgA:3*acaS:1*ctgV:1*ggtN:4*atcL:9*ccgG:2*gccG*gtgL:11*atcL:1*gcgS:6*cagV*gccS:2*gcgQ*ctcV*agcA:3*gcgT:1*tttL:1*cagD:4*acgA:1*gccT:1*ggcA*gctG:1*gcaS:2*gccL*gccT:1+A:1*cagN:1*gagQ:1*cagN:2*gccN:16*aacD:2*gatV:1*gcgT-ccg*gggA*actS*gggS*cagP*gccD:1*gggQ*gctD:2*atcL:1*tacF:4*aatA:1*ggcY*tccN*gggS:2+TP:1*cagM:3*gccN:2*ccgN:5*catN:2*tccT:2*gccS:2*tccA:8*cacS:4*tggY:4*gtcN:2*tccI:2*gcgN*ggtA*gtcI*ggcV:2*gtgG:3*cacN:11*gccS:2*ggcS:2*aatQ:4*gccL*gatT-gccaacatcgtcagcggt:1*gacN*ggtD:1*ctcV*ggcN*ggtP:1*ggtP*ggcV*ggtT*ggcN*ggaP*tggA:1*tacN:1*gacA*ggcA:1*gccD*ggcS*ggaN*cacI*ggcE*ggaP:1*ggcT*gcaS*atcV-ggc:1*ggcI:1*ggcT*gccQ:4*ggcT*cagP:4*cgcV*ggaN-ctgtggggtactggcggcgcc:2*cacN:2*caaA:2*ggtD*accA*gggN:1*ccaN:1*ctgA+NTSIAN*cccA:1*cagA*gcaG:1*atgN:5*gccD:2-ctgatc*ggcA:6*gacA:2*gtcQ*ggcA:2*ggcA:1-gtc*gccS*ggaS~gt211615ag*gcgV:2*gctD:2*gacN:2-aacgcctccacg*agtA:2*atcT:1*atcT+N*gcgG*caaH*accA:11*gacR:1-gcaccc:1*ggcW*aacL*ggcV:4-agcgtcgagcacactggcgctaccggctcctctgcg*agcN:5*accA:4*gggA*gtcI:1*gcgG*cccT:5+VPAN*aacQ:2*cacN*gtcS*agcA*ggcL:1*tcgT*gtcQ*aacP*acaV*gccG:1*gccD:2*aaaD:8*gccT:2*ccgR:2*cacD:3-gttctatccggcccggttggcgacagtggcaacggtggtgccggcggggacggcggggccggggttagcgccaccgatatcgccggcaccggcgggcgc:2*aacA:2*catA*ggcS:1*ctgW*tggL*atcM:4*gacN:2*gcgN:2*gtcT:2*gtcS:2*gccV:1*gcgG*gctN:1*gcgG:3*cacD:1*ggcA*gatG:2*tccN*gtaA*aatT*accS*cctT*attS*ggcS*ggcI*agcP*gagF*gccD*ggtA*gacH:2*aagN:2*ctgA:3-ggcggtgggcgcgggatattcggccagtttggggcc*ggcA:1*gccH:2*gccT:2*gtcD:2*gccD:2*gctH*ggcA:4*ggcR:2+L*aacL*ggtA:1*gccQ*attH*ttcA:1*gccS:1*accN*cccG:1*gccG*gccG:4*gacA:2*gttT*ggcH:2*ggtP*gcgG*gccS:1*gggN*aaaA:1+GT:1*gccT:1*ggtN*agcA*ggcD*ggcS*gtcT:2*gccG*accP:1*gccS:2*gccL*aagG:1-ctc:1*ggtA*gccF*accN:1*ggcS*aaaR:1*aacT*aacD:4 +NC_000962.3 miniprot mRNA 149533 363109 1432 + . ID=MP000273;Rank=1;Identity=0.5075;Positive=0.5791;Target=tr|L0TCB8|L0TCB8_MYCTU 1 588 +NC_000962.3 miniprot CDS 149533 150555 881 + 0 Parent=MP000273;Rank=1;Identity=0.5771;Target=tr|L0TCB8|L0TCB8_MYCTU 1 332 +NC_000962.3 miniprot CDS 362171 363109 551 + 0 Parent=MP000273;Rank=1;Identity=0.4313;Target=tr|L0TCB8|L0TCB8_MYCTU 333 588 +NC_000962.3 miniprot stop_codon 363107 363109 0 + 0 Parent=MP000273;Rank=1 +##PAF tr|O07243|O07243_MYCTU 204 0 204 + NC_000962.3 699930 384534 385146 612 612 0 AS:i:1081 ms:i:1081 np:i:204 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:204M cs:Z::204 +NC_000962.3 miniprot mRNA 384535 385149 1081 + . ID=MP000274;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07243|O07243_MYCTU 1 204 +NC_000962.3 miniprot CDS 384535 385149 1081 + 0 Parent=MP000274;Rank=1;Identity=1.0000;Target=tr|O07243|O07243_MYCTU 1 204 +NC_000962.3 miniprot stop_codon 385147 385149 0 + 0 Parent=MP000274;Rank=1 +##PAF sp|O53732|UFAA1_MYCTU 427 0 427 - NC_000962.3 699930 535226 536507 1281 1281 0 AS:i:2236 ms:i:2236 np:i:427 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:427M cs:Z::427 +NC_000962.3 miniprot mRNA 535224 536507 2236 - . ID=MP000275;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|O53732|UFAA1_MYCTU 1 427 +NC_000962.3 miniprot CDS 535224 536507 2236 - 0 Parent=MP000275;Rank=1;Identity=1.0000;Target=sp|O53732|UFAA1_MYCTU 1 427 +NC_000962.3 miniprot stop_codon 535224 535226 0 - 0 Parent=MP000275;Rank=1 +##PAF tr|O53772|O53772_MYCTU 388 0 388 - NC_000962.3 699930 668581 669745 1161 1164 0 AS:i:2037 ms:i:2037 np:i:388 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:388M cs:Z:*gtgM:387 +NC_000962.3 miniprot mRNA 668579 669745 2037 - . ID=MP000276;Rank=1;Identity=0.9974;Positive=1.0000;Target=tr|O53772|O53772_MYCTU 1 388 +NC_000962.3 miniprot CDS 668579 669745 2037 - 0 Parent=MP000276;Rank=1;Identity=0.9974;Target=tr|O53772|O53772_MYCTU 1 388 +NC_000962.3 miniprot stop_codon 668579 668581 0 - 0 Parent=MP000276;Rank=1 +##PAF tr|O53969|O53969_MYCTU 410 0 410 + NC_000962.3 699930 689058 690396 456 1344 0 AS:i:556 ms:i:556 np:i:221 fs:i:0 st:i:0 da:i:0 do:i:105 cg:Z:88M1I30M2D136M1I76M6D11M5D5M8D8M10D15M2D12M2D18M3D9M cs:Z::1*agaK*acgS*ctgF*accA:1*ttcR:2*ggcL*cgtA*gtcI:1*atgT*atgV:1*gcgI:2*acgV*gtgA*ctcA:1*gttA*ggtL*gttA:1*caaL*agcQ*ttcY*accQ*agcR*gtgL:1*atgF*ctgF*ttcN*gccQ*acaG*cctT*accR*tacV*tatS:1*caaY:3*acgA:2*atcL*aacR:2*gatN*aagT:2*atcV*gctS:1*gtgY*aacP:2*ctgK:1*cgcS:1*ctgI*gcaS*atcL*cgcD:1*aacP*cgcG:2*atcV*ggaE:1*tcgK*ttgV*cccD*ggcT*aagD*acaV+R*atcL:1*atgN*caaR*agcT*cggE*gcaV:2*cgcK:1*gacK*accG*attL:2*cgtS:1*aacF:1*gagD*atcV*gaaT:3*tcgD*gagG*ccgR:1-aaaccc*aacD*ggtS*ttcP*ctgI:1*ttgI*gcgE*cagR:2*acgS:3*atcL*tatP:2*ttcL*gtcG:1*gtcL*acgA*aagA*gcgT*gcgI*acgS:1*tggL*gacH*atcT*gatE*gccR*gtcL*aaaS*cgcE:2*aacA*gtgT:1*tcgA*gagQ:2*gatA*cagD:1*gccP*ccgA:1*ctaF*agtR*gccN:1*ctcI*gagH:2*aagA*gcaR*ttcL*tccA*gacQ:1*gtcL*ggcD*cggE:1*ggcD*gagN:1*atcL*gagR*caaS:5*aacA*aggK*atcA*gcgT*cgcG:2*ggcA*gacN:1*agcT*gagD:1*gtcI*aacV:2*ctgV*gtgR*aatD*gccT*aagN*acgV*ctgV:2*gcgQ*ttcL*aagR*caaT*cgcQ:1*cagA:2*cgcD*attR*ctgI*ctaW*accA:1*gtgI:1*gagA*gcaV*tcaA*gccE:1*gtaL*tctR:1*ctgF:1*acaA*gacE:1+R*cccQ*aacQ:1*aacR*catP*gtgA:1*gccD*cagK:1*cgcN*acgG:1*agcL*gagA*gagI*ctgV*gtgE*aagN:2*aacE*gaaR*ttgV*gccR*gatQ*gtaA*gccI*gtcP:1*ctcI*ggcN*agaT:1*accV*gcgM*gccS:1*acaG:1*gccS*gtcL*ggtS:7*atgY:6*tacG:1*attF*cttV:2*tggF*gttI*gacS:3*aaaS*aagD*cggL:1*atcL:2-gagaacttctggcgcagt:1*ggtT:1*ccgL*gaaP*ttcS*cgcQ*tggL*cccT:2-aacggcacccggttc:1*aacT:1*gcgQ:1-ccggcggcgccaccggtgcgggag:3*aagP*catL:1*ggaM:1-gccgtcccgccgggaacgccgtgctcctac*acaY:1*gcgR*gcgT:1*gcgQ*ttgG*ccaG*cggE:1*gacR*accL*ccaT:2-tgcgcg*ggcD:1*accI*gttT:1*ccgN*ttcP:1*ggaD:1*gacR*ttcY-ccggca:1*ctcY*gatR*gtcP*cagE:1*tcgP*ccgA:1*aatP:1*gatG:4*acgG:1-ggcatccta*agtP:1*gggQ*cggQ:2*gagD*ccgQ*gctP +NC_000962.3 miniprot mRNA 689059 690396 556 + . ID=MP000277;Rank=1;Identity=0.3393;Positive=0.4933;Target=tr|O53969|O53969_MYCTU 1 410 +NC_000962.3 miniprot CDS 689059 690396 556 + 0 Parent=MP000277;Rank=1;Identity=0.3393;Target=tr|O53969|O53969_MYCTU 1 410 +##PAF tr|O65933|O65933_MYCTU 1602 31 994 + NC_000962.3 699930 486042 488943 1437 2955 0 AS:i:2186 ms:i:2186 np:i:622 fs:i:0 st:i:0 da:i:312 do:i:993 cg:Z:39M1I10M11I79M4D190M2D67M1D44M3D408M1D28M1I13M2I17M1I13M4D4M7D19M2I14M cs:Z:*ataL*aacS:5*atcV:1*gtgM:3*tttY:2*gatG*attV:1*ggcS:2*cggT:2*gacE*tttL*ctgV*accA*gagQ*aagG*aagR*tgtD:1*ataV*acaS*gcgD*tatF:1+A:3*ttcW*acgD*aatV*gctD:1*actL:1+DPDPDACGKMY*gcgT*gagR*tccR:1*ggcT:2*aagE*gatH*gtcA*gcgG*ggtD:2*aatA*agaG:2*gatG:1*ccgG:1*gacS:3*cgaA:17*catR*gcaT:2*attD:1*gagT*tcaK:2*cttG:1*cgtA:4*gttA:2*tcgI*tcaH*actA*gacG:1*gtcG*cggG*cttQ*gtgL:1*gctG*agcE*gctL*cagE*caaG-aagtctactatt*tggY*gatG*aacL:2*ggtS*tctT*tcgL:1*attV*attA*gccS*aatG:1*atcV*tcaA:1*tttV:1*gatG*attL*cagE:2*tccA*attV*gtcS*attV:10*gtgL:3*tgtV*cgaQ:2*agtR*accS*tggG*gacE:2*atcL:2*gtcA:2*acgV*aatT:1*cttM*attA*tcaT:1*gaaA*ccaA*tggF*ggtV*gggE:1*aggS*gaaR*gcgQ*ggcR*atcA:1*tcgA*cagR*acaD:1*tgcR:1*cacK*gcgV*ttcY*gatA*aaaG*tccA:3*atgT*gtaA*cgcW*ggtS:2*tgcA:2*atcL:1*ctgV*cagE:2*agtV:3*cttR*gagL:1*cggH*cggP*ataV:2*attL*ctgV*acgR:8*aagA:3*attL*atgT:3*cctG*agtP*gcgS:1*attQ*ggtR:1*cttI*gaaR*aatA:1*tgcL*aagA:3*gtcL*gatR*ccgA*ctgV:1*atcV*ggcD*tacV:2*gccG:5*tcgM:3*aggP:3*cacQ:2*ggcL*atgA*gtcT*tttY:1*cgcQ*aagD:1-ccggga*tctV*gggE:2*atgW*atcL:4*ccgS:4*ctgT*gaaS*ggtA:3*atcV:2*ttgV:2*gcgM:1*ttgQ*atgA*gttM*gagR*cgtH:1*tcgV*ctgM*cttP*ccgK*agcT*gggL*gggH*tttV*acgD*gagV:1*aatT:1*gctH*atcV*ccaD*ttcW*acgS*gaaV*ttgG*ggcA*ctgV*agaS*gttL*gtaL*gacT*gaaQ*cttP*cagR*gagA:1*ccgS-gtg:1*gcgH:12*tttI*ggcS:7*gtcL:1*gaaQ:1*ggtP*tcgV:1*gggE*gcgS*gacV*acgV*gttP*tcgE*ggcV*cgcA*gcgS*gatP*gttT*ggcA*ggtA:1-ggtggtggg*gtgA:1*gcgP:2*attL:1*gggA*aagR*acgS*gctE*tcgQ:3*gctG:2*ggtQ:2*gggL*cggA*tatF:1*cggA:1*cggN:1*gcgD:2*gttP*gttI:3*tatW:3*agcK:2*tcgA*gtgM:1*gatE:7*cagA*actD:1*gatG*gagA:6*gggA*gtgL*gttA:2*cggE*ccgS*gagG:3*gtcA*tgcV:1*gttR*ggcA*aagR*ccgS*gcgV:3*gctV:3*gccP:3*tcgA:2*ctgV:3*agcA*gagQ:3*gccE*tacL:1*gttL:2*gagL:1*ctcF:3*gtgA*gacE:7*tatL:3*gatN:1*atcL:1*gggE*cacG:1*caaE*gatA:2*aatT*accS:10*gtgI:4*tatA*cggT:2*atgQ*tcgH:2*gtgI*cggS:1*ggtD*ttgF*gtgL*ctgI:6*ttgI:4*gtcL:2*gcgV:1*tgtS:1*ccgT:3*atgG:9*cagA*gcgE:5*gccV:1*tttV*gcgV:1*cagA:1*cgtS:1*gacE:2*gcgL:1*atgV:1*gggV*cacD*gatG*gtgA*agcN*atcL:4*ggtA:1*gctH:3*atcV:2*gccC*cacE*gatA:3*gcgD:3*cggH*ctgF*cgcA*ggcR*cagR:15*gcgL:5*atcL:4*gccR*gttI:2*gaaG*ctgI:2*ggcS*ttgK:1*acgR:2*gtcL*attV:6*ttgM*gtgA*gccG*gacA*gacG*ttcY*gccG*tcaD*gctG*gatQ:2*gccV*cggE:1*atcA:1*gcgR*gtgP:3*ggcA*gacE*agtG:1*cgtQ*agtL*gccL*cacN*tgcA*gccV:2*agtT:2*atcV:9*tcgA:1*atcV:1*gcaQ:2*gccP*gacL*gcgG*cagE*atcA*gtgL:2*cccA*acgM*ctgM:1*aaaR*gatE*cggH:2*ccgV*gtcS:2*atgL*acgG:1*gcgV:1*cagT*ggcL:1*gtcT*tcgA:1*atgA*ggcQ*ctgM:2*gccP*tcgA:2-tcc:1*tacS*cggP*cccG*aagR:1*gtgI:8*catR:1*aagR*ttcY:2*gcaP:1*gccT*ccaS*tcgA*gtcG:1+A:1*cccI*accS*gccG*gccV:1*cagL*atcL*gggA:1*agcR*gatH:1+LL:2*gaaV*ctcV*ttgE*gcgQ*tccP*tccD*gggS*tttD*gccV*gccV*cggV:1*gccT:2+L:1*gccV*gacG:2*ctcR*gccW*gcaL:1*atcD*gagH:1*gtaI-tgtgagcatgcc:1*gcgG:1*ctgV-gggcgcgacggcgctgccgga:1*gacL:2*cagA:2*gccV*gatE*tcgL*ggaA*tttL*aatR*tccA*ttgA*agtD*gccQ:1*gagD+CG*ctaV*cgtV*aacE*cgcE:2*gccV:2*gcaP*gtaL*acgV:2 +NC_000962.3 miniprot mRNA 486043 488943 2186 + . ID=MP000278;Rank=1;Identity=0.4863;Positive=0.6315;Target=tr|O65933|O65933_MYCTU 32 994 +NC_000962.3 miniprot CDS 486043 488943 2186 + 0 Parent=MP000278;Rank=1;Identity=0.4863;Target=tr|O65933|O65933_MYCTU 32 994 +##PAF tr|O86364|O86364_MYCTU 116 0 116 + NC_000962.3 699930 544834 545182 345 348 0 AS:i:632 ms:i:632 np:i:116 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:116M cs:Z:*ttgM:115 +NC_000962.3 miniprot mRNA 544835 545185 632 + . ID=MP000279;Rank=1;Identity=0.9914;Positive=1.0000;Target=tr|O86364|O86364_MYCTU 1 116 +NC_000962.3 miniprot CDS 544835 545185 632 + 0 Parent=MP000279;Rank=1;Identity=0.9914;Target=tr|O86364|O86364_MYCTU 1 116 +NC_000962.3 miniprot stop_codon 545183 545185 0 + 0 Parent=MP000279;Rank=1 +##PAF sp|P71668|LIPI_MYCTU 320 67 293 - NC_000962.3 699930 260018 260663 264 681 0 AS:i:353 ms:i:321 np:i:118 fs:i:0 st:i:0 da:i:48 do:i:93 cg:Z:6M1I2M1I69M2I1M1I46M3I7M1D26M1I1M3I56M cs:Z:*gtcI:1*gtcT:1*ctaI:1+W*cgaP:1+T*gccC*ggcP*agcD*aacQ*gaaA*ccaE:2*gcgV*ctgV:1*tggY*atcF:1*gccG:2*tacF:3*accD*gcgL*caaD*cagT*gacH:1*cggG*ctcT:1*ctcR*cggQ*ttcH*agcA*agcV*agaG*ctgA*ggcD*atcA*actI:1*gcaV:9*aatH:5*ctgI*ggcE:1*tgcA*tacW*tcgA:1*ttgT*accR:1*ctgV:1+EH*agcG+R*ctgQ*ccgV*gcgG*gtgA:1*cccL*gcgG:1*gtgI:1*atcV*ggcA:1*gctD:4*ggcT*ctcI:2*gcgV*ctgI:1*ctgQ*cttR:3*cgtM:2*atcP*acaP*ccgI*gcaV:4*gtgW:2*atgS*ctcT+LWD*gacQ*gacS*cggL:2*atcL:1-ccc*gccE:1*ccgA*cacD*tacA*cggP*ctaI*tggL*aacD*gggV*cgcK:1*aacI*cggA*ttcA*ggcF*tggS:1*gcaW:1*cttA:1*gatE*gcgI:1*gcaL+H*cggN+PPA*gtcP*gcgM*gtcA:3*cgtA*gacE*gacN:1*ggaA*gggD:1*gcgP:2*tggY:1*ggcA:1*ggcA*accG*cacY:1*ctgP:1*cacR:1*gagD*gatG*ctgI*gccR:1*gccG:1*cgtL:1*acaA:5*tgcV*cagE:1*gaaH*gtaN*gtcA*gaaQ*ggcT*gccL*ttcV:2*ttcY +NC_000962.3 miniprot mRNA 260019 260663 321 - . ID=MP000280;Rank=1;Identity=0.3877;Positive=0.5198;Target=sp|P71668|LIPI_MYCTU 68 293 +NC_000962.3 miniprot CDS 260019 260663 321 - 0 Parent=MP000280;Rank=1;Identity=0.3877;Target=sp|P71668|LIPI_MYCTU 68 293 +##PAF tr|P71986|P71986_MYCTU 256 31 245 + NC_000962.3 699930 387878 388541 279 684 0 AS:i:405 ms:i:400 np:i:127 fs:i:0 st:i:0 da:i:-1 do:i:6 cg:Z:55M11D29M3D91M4I10M3I22M cs:Z:*ctgV:1*agcF:1*ggcS*cgaK*catG*gaaV:2*aggN*gacG:1*cgaG*aagR*tcgW*tcaL:1*gtcI*ctgA:1*gcgS*gtcL*ctcV*gccV*ccgS:2*gtgI*ttcL*ttcY:1*acgQ:1*ggaA*gatE*gtcH*agtT*acgC*cttC*gccR*gccE*cgcT*gccP*gatA:1*aacI:1*gttT*ctcG*ggcP:1*gacS:2-tgttgtgtgcagatcgtgccggttgcaccgctg:1*ttcN*tccA*tcaP*cagR:1*tccA*ggcS*ggtP*gaaT*atcE*gggA*acgD*ggcL:4*cagA*ttcP*gctV*tcgA:1*tcgQ*agaQ*tggF*cgcQ*atcF*gtaA-tctcggtat:2*gtaA:3*cccS:1*cagE:6*gtcI*ttgW*acaV:2*agtA*atcV:1*gcgV*gctL:2*gaaQ:1*cgcT*gaaN:1*ggcF:1*gttY:1*ccgQ:1*gcgP:1*agaK:7*ctcI:3*gttI:2*cccH*ggcH*accS*gccD:3*gcgQ:3*gagQ*atcV*gtcA*gctG*ttcL*gtaA:1*aagA:2*accK:1*tttW:1*atgV*caaL*gatH:4*ggcQ*gccG:2+PGIG*acgA:1*aacS*ggcW*gcgT*cggA*acaD*accY:1*gccS+ETL*ggcN:4*atcV:2*acgA:1*gtgD:7*gagR:1*ctcT:1 +NC_000962.3 miniprot mRNA 387879 388541 400 + . ID=MP000281;Rank=1;Identity=0.4079;Positive=0.5570;Target=tr|P71986|P71986_MYCTU 32 245 +NC_000962.3 miniprot CDS 387879 388541 400 + 0 Parent=MP000281;Rank=1;Identity=0.4079;Target=tr|P71986|P71986_MYCTU 32 245 +##PAF tr|P96257|P96257_MYCTU 328 0 328 - NC_000962.3 699930 497316 498300 984 984 0 AS:i:1680 ms:i:1680 np:i:328 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:328M cs:Z::328 +NC_000962.3 miniprot mRNA 497314 498300 1680 - . ID=MP000282;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96257|P96257_MYCTU 1 328 +NC_000962.3 miniprot CDS 497314 498300 1680 - 0 Parent=MP000282;Rank=1;Identity=1.0000;Target=tr|P96257|P96257_MYCTU 1 328 +NC_000962.3 miniprot stop_codon 497314 497316 0 - 0 Parent=MP000282;Rank=1 +##PAF tr|P96262|P96262_MYCTU 68 0 68 + NC_000962.3 699930 502166 502370 204 204 0 AS:i:336 ms:i:336 np:i:68 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:68M cs:Z::68 +NC_000962.3 miniprot mRNA 502167 502373 336 + . ID=MP000283;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96262|P96262_MYCTU 1 68 +NC_000962.3 miniprot CDS 502167 502373 336 + 0 Parent=MP000283;Rank=1;Identity=1.0000;Target=tr|P96262|P96262_MYCTU 1 68 +NC_000962.3 miniprot stop_codon 502371 502373 0 + 0 Parent=MP000283;Rank=1 +##PAF sp|P9WHZ9|PPE38_MYCTU 391 2 391 - NC_000962.3 699930 337852 434679 534 1196 0 AS:i:597 ms:i:650 np:i:215 fs:i:1 st:i:0 da:i:0 do:i:1290 cg:Z:165M8D1M95700N21M2I33M1D5M4I11M2F16M1I13M4I9M1I24M6I56M5I12M cs:Z:*atgL*agcD:1*gcgS*gtgW:9*ctgI:1*gtgA:3*ttgS*gcgG:1*atgL*ctgF*gacM:5*gatE:3*gacA*gaaD:1*ggtR*tcgA*gccS:1*gccS:2*tcgD:2*acgI:4*ggtA*tccG*tcgP:1*ctgS:1*gcgP:2*acgV:2*acgA:6*ctgV:7*gcgG:2*cagE*cagL*gcgS:1*accG:1*accA*cggT*ctgA:2*gccT:13*atcA*atcV*tcgT:3*gcaV:1*ttcL*gtgG*tcgA:2*gtcA*tcgT:1*ctgI:4*gccT:7*gccF*gccD:1*gagV*cagE:6*gcgG:2*tttV:6*tcgA:1*gccV*gtcA*tcgE*gcgT:1-acaccgttcggccaggcgctgccg:1~gt95700ag:1*cttF:1*gcgV:2*gcgL*gcgD*ccgL:2*ccgL:1*gaaS*acgQ:2*tgtA*tcgQ*ccgL:1+GM:1*gggT:2*gcgS*ccgA:1*gggL*caaS:1*acgI*ccgA*gcaE*ccgG:1*gggV*ccgE*gcgG*gatV:2*gaaV*acgV:1*ggcA*tgtA*tcgQ*gcgS*ccgV:2*ccgG*gtgL-ggc:1*gcgV:1*tcgA:1+LQVG*tctQ*ttgA:2*gcgY:2*gggS:1*gcgL*gctI-ct:1*gggP*ctgM*ttcM*ggcQ*gccL*ggcA*ggcQ*accM:1*ggtT*agtT*ggcA*gggN:1*agcA+G*ataL*atcA*aacG*gtcA*ggcE*gggA*aacA:1*gggL:1*ggcA*ggcA:1+VPTF:2*atgD*ctcI*agcA*ctcS:1*gccT*gccG+L:5*agcL:1*ggaA*tccG*aacM*ccgS*gacA*ggtE*ggcL:1*ggtK:1*ggtR*gggL*atcV:1*ggcA*gacM*ggcS+VPPTWE:1*acgS*ttgV*ttcP*ggcA*tccR*ggcM*ggcA*gccS*ggcS*ggcA*gtcM*tgcA:3*ttcA*gacM*gccP*ggcA*gggE*gcgV*ggcP*ggcA:3*aagP*gcgM:1*ctgM*ctcM*atcP*gggM*gcgP*ggcM:1*gccM:4*ggcA:1*tccM*ttcP:2*gccM*ggcM:1*accR:3*ggcN+PHVVQ*ggcA*gcgR:1*gggS*ctcV:1*ggcP*aacR*gccV:1*aacI:1 +NC_000962.3 miniprot mRNA 337853 434679 650 - . ID=MP000284;Rank=1;Identity=0.4465;Positive=0.5393;Frameshift=1;Target=sp|P9WHZ9|PPE38_MYCTU 3 391 +NC_000962.3 miniprot CDS 434158 434679 521 - 0 Parent=MP000284;Rank=1;Identity=0.6149;Target=sp|P9WHZ9|PPE38_MYCTU 3 168 +NC_000962.3 miniprot CDS 337853 338457 129 - 0 Parent=MP000284;Rank=1;Identity=0.3160;Frameshift=1;Target=sp|P9WHZ9|PPE38_MYCTU 169 391 +##PAF sp|P9WIE9|PG44_MYCTU 543 0 543 + NC_000962.3 699930 149532 362014 948 1752 0 AS:i:1220 ms:i:1262 np:i:353 fs:i:0 st:i:0 da:i:0 do:i:-1 cg:Z:91M5I1M1I35M1D16M1I82M6D33M5D16M1I19M7D8M1I14M1I13M1I7M2I11M1D18M2I8M4D13M1I25M1I31M210790N5M4D22M3I16M3D15M6D12M4D12M cs:Z::4*agcT*gtaA:3*attM*gtgL*gtgA*gccT:2*acaQ*gacN*ctgV:1*ggtN:2*tcgT*gcgS*atcL:5*gccT:3*ccgS:2*gccS:10*gcgQ:3*gcgR:3*ggcD*cacY:1*cagT*gccH:2*gcgS:1*agcN:7*cagH*cagS:5*gccN*ggtA*ggcA*gctG:3*gcgS*gccS:2+AANAS:1+Q*cagA*gtcL:2*cagN:3*gcgV:4*accA:3*ctgF:9*gatN:1*gcgT*ccgA*gggA*actS*gggP*cagN-gcc:2*gctD:11*ggcF:1+Q*gggT*gcgT:2*cagV:6*ccgS:5*catN:2*tccN:5*tccA:8*cacA:4*tggL:4*gtcA:2*tccP:2*gcgP*ggtT*gtcD*ggcV*gcaP*ggcA*gtgG*gctT:2*cacA:5*gccD:1*gggP:1*tggI:1*gccW:2*ggcN:2*aatP:2-aacggcgccgatgccaac*atcF*gtcA*agcA*ggtF:1*gacN:2*ctcA:2*gccN:2*ggtA*ggcS:1*tggS:1*tacF:1*gacV:5*cacV:2*caaS*ggcS*gcaE-atcggcctcggcggc*ggcD*gccV:2*gacT:2*cagA:7*tggF+L:1*actL:2*gccD:2*cacA:2*caaT*ggcS*ggtN*ggtN*accN:2*ccaD*ccgG-ctgcccggtcaggcaggcatg:2*gcgG:1*ggcT:3+R:1*atcF*ggcS*aacL:2*gccD:2*gacN:2*gtcA:1+T:1*tccI:1*gggS*gtcN:2*gtaD:5+D*aacS*gccS*atgA:3*cacY+AQ:2*gccS:2*gccL:2*gacF*agcG*agtE-ttc*gctS*aatT:1*gcgG*gccD:2*gcgL:4*gggA*cacV:1*ttcI:1*aatT+GV:2*tccF:2*cacL:2-gccgtcacggcc:1*aacS*accN:1*atcT:5*gtcA:2+T*gacG:1*aggT:3*cacL:1*ggcA*gccG:2*gccG:1*gggI*gacG*cgcG*gccF*ggaA*gccV*ttgN:2*cgtN*gacG+V:2*cccL:2*aacQ:2*gctQ:1*ggcA*cagA:1*tacI:1*aacL:1*ggcA*gacG:2*cccG:1*accA:2*acaA*ctgT*cagV*gcgV*gcgG~gt210790ag*gccL:2*gacN:1-gggctgttgttc:1*aacD:2*aacD:2*tccG*ggcL*gcaF*cccS*ggaI*cagG*gccV:2*gccD:2*gcgN:2+NGA*ttcM*ttcP*ggcA:6*gacN*ggcA:1*gccV*ggaI:2-ggcggcgcc:1*ggcS*accF:1*ggcP*tggS:1*ttcV:7-gccggcgggatcggtgtt*gccN:1*atcV:3*ctcT:2*gccS:2-gacggcggcaac*gccI*gggL:1*ttcG*ggcA:2*ggcA:2*ggcP*atgS +NC_000962.3 miniprot mRNA 149533 362014 1262 + . ID=MP000285;Rank=1;Identity=0.5411;Positive=0.6045;Target=sp|P9WIE9|PG44_MYCTU 1 543 +NC_000962.3 miniprot CDS 149533 150927 1107 + 0 Parent=MP000285;Rank=1;Identity=0.5602;Target=sp|P9WIE9|PG44_MYCTU 1 458 +NC_000962.3 miniprot CDS 361718 362014 155 + 0 Parent=MP000285;Rank=1;Identity=0.4510;Target=sp|P9WIE9|PG44_MYCTU 459 543 +##PAF sp|P9WJC5|ESPI_MYCTU 666 33 220 - NC_000962.3 699930 149939 150491 258 624 0 AS:i:267 ms:i:279 np:i:96 fs:i:0 st:i:3 da:i:90 do:i:186 cg:Z:19M9I26M4D18M5D14M9D8M3D18M5I15M5I10M1I3M1I13M2I11M1I8M cs:Z::4*cccA*gcgS:1*cccN*atgL:1*gccK*tgaP*ccgN:1*agcQ*ggtT*gggP:2+TSDDLSERF:1*ccaS*ccgA:1*tgcP:2*tgtP:2*gcgP:2*gtaP:1*cacP*agtT:1*cggM:1*gcgI*ccgA*cccA*tggG*cccE:1-tcgccgccggcg:1*ccgS:1*aggE:1*attA:1*cctS*tgtK:2*tgtT:2*gccM:1*ccgI*tcgA-ccgtagagccatccg*ccaG:1*ccaE:4*aggK:2*tctT:2*ctgM-acgatgttggcatcggcgccgttcccg:1*ttgI*ccaA*ccgG:1*ccgE:2-ccccacagc:1*gcgP*gcaK:2*gcaT:2*tgaM:1*ccaI:1*acgG:5+TESQL:3*gatR:4*ccgQ*ttgT:1*cacT*agcG*catA:1+QQPES:1*tgcA:1*ccgH*gccV:1*ccgS*gccH*gcgG:1+H*gagQ:1*ccgR+R*gccT*ccgA:1*gacA:3*ccgA*atcK*agcM:1*gccI:1+EP:4*ccgS*gccR*tgcP*ccaS:1*gccS:1+A:3*ttgT*ccgR:1*ttgA:1 +NC_000962.3 miniprot mRNA 149940 150491 279 - . ID=MP000286;Rank=1;Identity=0.4135;Positive=0.4615;StopCodon=3;Target=sp|P9WJC5|ESPI_MYCTU 34 220 +NC_000962.3 miniprot CDS 149940 150491 279 - 0 Parent=MP000286;Rank=1;Identity=0.4135;StopCodon=3;Target=sp|P9WJC5|ESPI_MYCTU 34 220 +##PAF sp|P9WKU7|Y493_MYCTU 329 0 329 - NC_000962.3 699930 583703 584690 984 987 0 AS:i:1793 ms:i:1793 np:i:329 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:329M cs:Z:*gtgM:328 +NC_000962.3 miniprot mRNA 583701 584690 1793 - . ID=MP000287;Rank=1;Identity=0.9970;Positive=1.0000;Target=sp|P9WKU7|Y493_MYCTU 1 329 +NC_000962.3 miniprot CDS 583701 584690 1793 - 0 Parent=MP000287;Rank=1;Identity=0.9970;Target=sp|P9WKU7|Y493_MYCTU 1 329 +NC_000962.3 miniprot stop_codon 583701 583703 0 - 0 Parent=MP000287;Rank=1 +##PAF sp|P9WKV3|LDT5_MYCTU 451 0 451 + NC_000962.3 699930 571709 573062 1350 1353 0 AS:i:2374 ms:i:2374 np:i:451 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:451M cs:Z:*gtgM:450 +NC_000962.3 miniprot mRNA 571710 573065 2374 + . ID=MP000288;Rank=1;Identity=0.9978;Positive=1.0000;Target=sp|P9WKV3|LDT5_MYCTU 1 451 +NC_000962.3 miniprot CDS 571710 573065 2374 + 0 Parent=MP000288;Rank=1;Identity=0.9978;Target=sp|P9WKV3|LDT5_MYCTU 1 451 +NC_000962.3 miniprot stop_codon 573063 573065 0 + 0 Parent=MP000288;Rank=1 +##PAF sp|P9WMP5|HEM2_MYCTU 329 0 329 + NC_000962.3 699930 604601 605588 987 987 0 AS:i:1660 ms:i:1660 np:i:329 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:329M cs:Z::329 +NC_000962.3 miniprot mRNA 604602 605591 1660 + . ID=MP000289;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WMP5|HEM2_MYCTU 1 329 +NC_000962.3 miniprot CDS 604602 605591 1660 + 0 Parent=MP000289;Rank=1;Identity=1.0000;Target=sp|P9WMP5|HEM2_MYCTU 1 329 +NC_000962.3 miniprot stop_codon 605589 605591 0 + 0 Parent=MP000289;Rank=1 +##PAF sp|P9WNP5|MENB_MYCTU 314 0 314 - NC_000962.3 699930 639014 639956 939 942 0 AS:i:1652 ms:i:1652 np:i:314 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:314M cs:Z:*gtgM:313 +NC_000962.3 miniprot mRNA 639012 639956 1652 - . ID=MP000290;Rank=1;Identity=0.9968;Positive=1.0000;Target=sp|P9WNP5|MENB_MYCTU 1 314 +NC_000962.3 miniprot CDS 639012 639956 1652 - 0 Parent=MP000290;Rank=1;Identity=0.9968;Target=sp|P9WNP5|MENB_MYCTU 1 314 +NC_000962.3 miniprot stop_codon 639012 639014 0 - 0 Parent=MP000290;Rank=1 +##PAF sp|P9WNP7|FADB2_MYCTU 286 0 286 + NC_000962.3 699930 558894 559752 855 858 0 AS:i:1400 ms:i:1400 np:i:286 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:286M cs:Z:*gtgM:285 +NC_000962.3 miniprot mRNA 558895 559755 1400 + . ID=MP000291;Rank=1;Identity=0.9965;Positive=1.0000;Target=sp|P9WNP7|FADB2_MYCTU 1 286 +NC_000962.3 miniprot CDS 558895 559755 1400 + 0 Parent=MP000291;Rank=1;Identity=0.9965;Target=sp|P9WNP7|FADB2_MYCTU 1 286 +NC_000962.3 miniprot stop_codon 559753 559755 0 + 0 Parent=MP000291;Rank=1 +##PAF sp|P9WPC9|CLPC1_MYCTU 848 5 804 - NC_000962.3 699930 459488 461984 1236 2598 0 AS:i:1870 ms:i:1862 np:i:565 fs:i:0 st:i:0 da:i:-1 do:i:30 cg:Z:68M2D39M1I28M13I11M1D111M1D21M1D128M8D15M9D10M14D27M31D192M12I1M2I3M6I111M cs:Z::1*accD*aagR*acgA*cagR*gcgR*gcgV*ctaV*accV*gcgL:1*ttaQ*cagE*gcgE:1*tcgR*accM*gccL*ggcN*aatH*cccN*gagY:1*cggG*cccT*gctE:1*ctgI:1*atgL*gcgG:1*ctgI*accH*caaE*aacG*gacE:1*atcV:2*ccgK*ctaS:2*gctS*gtcL:1*gtcI*gagS*cccL*gccE*accG:2*gccS*gaaQ*accV*cagE*cgcE*ctgI*ctcI*gacG*cgtQ*ttgG*ccgQ:2-actgga*gccP:1*acgG*cagH*ccgI*cagP*ctgF*tccT*cgcP*gagR*tcgA*ttaK*gcgK*gcgV*atcL*accE*accL*gcgS*cagL*cagR*ctgE:1*accL*gagQ:1*gacG*gacH*gagN:1*gtcI*tccG:3*gtgI*atgL*gtcL:2+I*gccR*accE:1*gacE*tccG*gacV*gtcA:1*aagQ*ctgV:1*accV*ggcK*cacL:2*tcgE*ccgL*cagT*gcgR*ctgV:1*gagQ*gcgQ*ttcV*gtcI*aagQ*gtgL+LSGYQGKEAAEAG*cgcT:1*agcG*gccR*cggG*gtcG*accE:1*cccG*gaaS:1-gag*gcgS:1*tatS*cagL*gcgV:1*cagD*aagQ*tacF*tccG*accR*gacN:3*cgcA:1*cgcM:10*gacE*aacK:2*cgcE:2*gtgM:23*atcV:6*cgcA:2*gccH:1*gacE:3*agcT:1*cgcK:2*accQ*atcL*gtcY*gcgT:5*atgL:4*aaaR:3*gaaD:6*gccK:2*gacK*gacE:1-aag:1*tcgT*gccR:1*caaD:2*acgL:7*atcL:5-acc*ggcA:3*atgI:2*ggcA*aacS*atgI*atcL:2*atgK:6*cggQ*ctgT*gtcI:10*cacY:12*cagP:1*tacQ:4*tcgT:2*gacH:2*ggcE:2*cgcK:2*aaaR:4*gtgA:2*gggR:1*cgcS:3*tcgA:1*ctgM:6*agcA:4*accN*gccD:10*gtcI:3*gccG*agcA:1*ctgM:1*atgI*gagR*atcR*gacM*tcgT*cggA:1*gtcP*gagD*atcL*gacR:1*gtcF*gagD-cggctggtgcgccggctggagatc:1*gagK*atgI:1*ctgE*tccA*aaaR*gaaR:1*gacK:1*gcgS*tcgA*gcgI*gagD-cggttggccaagctgcgctccgagctg:1*gacQ*cagD*aaaF:2*ttgA:1*gagS:1-accacccgctggcagaacgagaagaacgcgatcgaaatcgtc:2*ctcR*aagE*gagK*cagT:1*gaaV:1*ctgQ:1*gggA:1*tccR:1*cggK*gccQ*gaaW:1*gacS:3*gccD*aagV*gccV:1-gagctgcgctacggacgcatccccgaggtggagaagaagctcgacgcggcgttgccgcaggcgcaggcccgggagcaggtgatgctcaaggag:2*ggtD*cccD*gacE*gacQ:2*gacE:1*gtgL*tcgG*gcgN:5*gccV*ggtF*cggK:1*ctgT:1*ggcA:2*gccT*aagR:5*gacE:2*ggcH:2*gtcI:3*aagE*gccD:2*accK:3*gatK:1*gtgI:2*agcT:3*gtgL*tccK:2*aacK:2*accS:1*gcgS:1*atgI:1*ctcA:2*accS:7*gccS:4*gacN:3*gacG:1*gagD*cggD:1*atgL*gtcI*cgcQ:3*agcG:1*tacF*ggcH*gagD*aagR*cacF:1*gtgA*gctS:2*atcF:10*gcgE:6*gcgK:3*cgtK:1*tacF*acgS:11*ccgQ*gacE*gtgI*ttcY*gacN*gtgS:5*gacE*gagD:6*cacQ:6*cgcK:2*atcV:2*ctgF:5+TSDISKPVGLGF:1+KG:2*agcE+NDYERM*gccK*gagQ*cagK:1*ctgN*gccD*gcgE*gtgL*cgcK*gctK*acgH:1*aagR:3*atcL:2*ctcI:2*gtgI*ctcI*atcV:1*gagH*ggtQ:1*aacT*cccR:2*ctgI*gtgI:1*atcM:2*atcL*cagM*ctgI*gcgS*cagR*ctgV*ggcA*aagG*cggQ:1*gcgK*cagS*cggK*cggD*ctgM*cagA:1*cagV*gtcL*tcgT*ctgD*ccgA:2*cgcA*tggL:2*cagK:6*tacL:7*ctgT*gtgI:1*cagR*gccE:1*ggtE:3*gccS*aagE*atgK*ctgI:1*gccF*ggcE*cagE:1*cacG*gacP:1*gatQ*accV:1*ccgT:1*aacD:1 +NC_000962.3 miniprot mRNA 459489 461984 1862 - . ID=MP000292;Rank=1;Identity=0.4758;Positive=0.6524;Target=sp|P9WPC9|CLPC1_MYCTU 6 804 +NC_000962.3 miniprot CDS 459489 461984 1862 - 0 Parent=MP000292;Rank=1;Identity=0.4758;Target=sp|P9WPC9|CLPC1_MYCTU 6 804 +##PAF sp|P9WQ37|FAC13_MYCTU 503 29 503 + NC_000962.3 699930 195145 196597 522 1464 0 AS:i:684 ms:i:684 np:i:257 fs:i:0 st:i:0 da:i:0 do:i:57 cg:Z:90M1I16M6D61M1D32M2D40M1I22M2D35M2I16M2D3M1D155M cs:Z::2*tggY:1*gacQ*ctaM*aggN*cgcA*cggL*gttA*gcgN*gcgR*ctgC:1*ggcD*gcaV:1*agcT*ggtA*cgcL:1*gtcI*ggtA*ttcK:4*atgA*atcL:2*cttP:1*cgcS*accV:2*gtcC*gagC*tcgL*gtgF*ctgY*gccG:1*aacA*atgK*atcL:2*atcV:3*ctgI:1*ttcT:2*accA*ccaA*accP:1*atcV*gccS*gtcF*ctgI*gtcL*gaaS:1*tgtS*gtcG*gcaS*cacK:1*atgV*ctgI*accY*gaaG:1*gcgP*ctgS:3*gccI*atcD*ggtA*gtcI:1+A*aacQ*atcA*cagD:1*ttgP*ctgG*agcT:1*atcT*gtgD*gtcW*gccI:1*ggaA*tccD:1-caggacagcgtgttcggc*tatL*gagA*gacE*ctaR:1*aacR*gagS:1*gggA*gatA*gtcD*cacE*gaaP*ccgA:1*gacE*atcC*ccgG*aacG:1*tcgD*ccgN*gccL*ttgF:9*cgcH:3*gccV:1*ctgH:2*gcgE*aacS*ctcV*accH*ggtS*cagA:1*atgS*accS*gcgW*ctcA*tacS:1*agtI*ggcD*gccV*aatR*atcY*aacR-agc:1*gtcR*ggtL*ttcL*gtcL*ggcP*gtcL:1*ctgM:2*atcV:1*ggaA*atcL*ggcT*aacT*atgV*ctgI*accF*gggS*ctgA*ctgM*ctcR:1*ttgV*cccT*acgL*gtgI*atcS*tatM:1-ctgggc*gcgQ:2*ccgA*ggaT*cagK*ctgV*ctcW*gacS*gtgL*ctgI*gagV*gcaE:1*aagR:1*accC*ggcI*atcG*tttG*ctgA:3*cagI*tggL*cagN*gcgF*gtcM*tgtR*accQ*gaaV*cagP*caaE*gcaF*cgaA*ccaE*cgtL:1*ttgA+P*aggD*ttaF:1*gtgY*ttgF*tcgI*tggT:1*gctG:2*gcgM:1*gatE:2*ctgI*cggK*cagI*atgY*tcgA:1-accttt*cccK*gaaN*accI*cagE*ataV*ctgV*gccQ*gcaG*ttcY*ggcA*cagL:2*atgS*tcaC*ccgG*gtcG*accG*tgcT*atgL:2*ggcS:3*atcL*gctR:1*cgcA:2*gtcA:2+AT*gtgM*atcF*ccgT*accD:2*gcaV:1*gtgG*gtcD:1*cagG*aacV*atgI*aacR*gatE-gtcccc*gtcH:2-gtg:2*attV:1*tacI*cggK*gcaS*ccaD*acaI:1*atgL*agcK*tgcE:3*aacR:4*gcgR*gagD:2*gcaD*ggcN:3*catR*tctT:2*ctgI*gttG*cgtE*atgI:1*tccD*gacE:2*gtcL*tggY*gtgI*gtgK:2*aagL:10*attV:1*tgcP:2*ctgI:1*aacS:1*ctgI*gccI*agcG*catV:1*gacG*atcV*gccS:6*cggL*gccP:6*gtgI*ccgA*atcA:1*gtcI*gcgV*gccV*gtaA*acgD*aacQ*gacN*gacE*cttV*cggS*atcE*gaaQ*gacQ*ctaI*ggtV:1*ttcY*ctgC*accG*gacT:6*cacL:2*gcgK*ctcV*gagI*atcF*gtgA*gacE:1*ctgI:4*gcgT:2*gtgI:3*gaaV:2*ttgE*cgcQ:1*ggcS:1*tgtT:1*aatP*gttK +NC_000962.3 miniprot mRNA 195146 196597 684 + . ID=MP000293;Rank=1;Identity=0.3566;Positive=0.5266;Target=sp|P9WQ37|FAC13_MYCTU 30 503 +NC_000962.3 miniprot CDS 195146 196597 684 + 0 Parent=MP000293;Rank=1;Identity=0.3566;Target=sp|P9WQ37|FAC13_MYCTU 30 503 +##PAF sp|P9WQ49|FAD21_MYCTU 578 4 576 + NC_000962.3 699930 483979 485719 789 1752 0 AS:i:1212 ms:i:1212 np:i:354 fs:i:0 st:i:0 da:i:3 do:i:12 cg:Z:43M1D9M2D92M4I11M5D198M2D14M1D44M1D157M cs:Z::2*ataL:1*acgL:2*gacE:2*accG*acgL*actQ:1*agcD:1*gaaA:2*gtgT*ttcY*atgI:2*gacE*acaQ*aaaD*accW*ggcA*gacG*caaI*attT*gacE*cgaT*atgL:3*caaE*ttaV*tatF*tctR:1-gtc:1*gccR*gtgI*tctV:1*tatH*ctaE*ataV*agtR-tatggc:2*gctC*gacT*cgaT*cgaG*aggD*accR:1*gcgV:1*tcaL:5*gacA:1*gttI:1*ggaA:3*gcaS*ctgM*tgcQ:2*tggA*acgI*ccgA:3*ccaS*gaaV:1*ctgQ*ggcI*agcG*ctaS*cgcH:1*aagE:1*actV*ggaS*ctgA*gctV*gtaL*ctcA:1*tgtA*gccS*gccP*gacS:1*gtgI:4*caaA*gccV*gaaA*acgE*cggA:1*aggA*gccE*acgH:1*gctH*acaR*catP*gggN*gcgT*tctN*gtaN*actV*acgG:1*gtcI:1*gcgE*ttgI:1*acaS:2+LTGN*gagS:2*ggaF*gatR*aacV*tgtK:2*gatP:1-caactatcagactgg*agtA*tcgA:9*gccR*aacA:1*cgtA:2*gttM*ttaI:1*atgH:2*gttL*acgQ*gaaA:1*gtcF*gacQ:1*attL*atcM*cgtS:3*cgcG*catD*gagR*ggcN:1*gcgV*ccgA*aggP*ttgP*cccD*agcT*tcgT*gtcI:5*cttF:6*atgV*gttL:1*ctcI*tttI*attA:1*ttgI*tttL*gtcG:1*tgtY*ccgR*gttS*atcE:4*gagL:2*atcL*cgtQ*aagR:4*atgL*caaH*ctgS:2*aaaN*cacG*cagS*gcgP*ccaS*tttW:8*gatE:3*gctR:2*tccT*gaaD*gagA:1*atgI*gcgE:5*cacN:1*aatL*acaG:1*atcT*aacS:3*cagR:1*cagH:3*ataL*accS*aaaR:1*ctcC*cgcN:2*cgtA:3*ttgF*atgR*cccE*gcaD*gcgM*gtcI*aagR:4*atgL:3*gtgT*gttL:1*ctgV:1*acgS*acgR*aagN*gcgS:1*tcaD*cctK:1*acgE*tcaV*accV*gagY:1*gatE*gctP:1*agcK:1*gctS*cgaT:1*cacS:1-gagcta*agtN*actR*ttcC:1*actP*gagK*cgtT*gcaG:1*cgtP:1*ataL*cgcS:1-cac*agcG*gacM*gacP*aagT*gaaS:1*ttgT*cttV:6*tcgT*aatC:2*ctcC*ggaP*ccgA:1*cgtT:5*attV*cacK:1*aagD:2*tctA*accE:2*cacW:1*gcaK*gacP:1*gcgE-ctc*aatT:1*gatH*aagT:1*cagG:1*agcM*atcL*cggV*gagH*gccP:5*aggD*tcgG*ccgS:9*ataL*gtaS*ggaE:2*ttcM*tacF:7*ctcM*attL:1*caaV*gacY:1*gtaR:4*gatE:3*actS:2*aagQ:1*tttI:7*tttI:2*tccP*gacV:1*gggH*gtgT:1*catK:2*attT*gcgV*gccI:1*gtaL*aggK*actL*gagL*catG*gggD*cccS*gatA*aaaG*gtgE*actA*attM*atgD*gatE*ttcL*tcgD*acgV:2*aggN*ctgN:1*gtaT*tcgA:1*ttgI:1*aaaR*ttaS:3*catN:1*acaA:1*tttL*cttV:5*gcgS*ctaI:1*aagT:6*agcR:4*gcaV*aagE:2*ggaR*gcaL*aatQ*aagQ*ttgF*caaT:1*gtaL +NC_000962.3 miniprot mRNA 483980 485719 1212 + . ID=MP000294;Rank=1;Identity=0.4503;Positive=0.6062;Target=sp|P9WQ49|FAD21_MYCTU 5 576 +NC_000962.3 miniprot CDS 483980 485719 1212 + 0 Parent=MP000294;Rank=1;Identity=0.4503;Target=sp|P9WQ49|FAD21_MYCTU 5 576 +##PAF tr|Q11028|Q11028_MYCTU 1159 82 1158 + NC_000962.3 699930 463437 466665 1746 3267 0 AS:i:2606 ms:i:2606 np:i:739 fs:i:0 st:i:0 da:i:27 do:i:0 cg:Z:43M1I133M1D50M2D4M1I226M3I117M1D24M1D19M5I34M2D126M1D14M1I24M1D10M2I7M4D232M cs:Z::4*ttgT:7*tggR:1*tggS*gagQ:1*catR*ccaL*gacN*gacE*atgL*ggtA:1*gccD*gtgY*gcgP*cgcT:2*aaaQ*gccN*gtgI:1*ggtE*gtgA*attV:3*gacG:2+T:3*gagD:1*ggtE*gagV:1*gatS*agcG*tttL:1*ctcV:2*gccL*tgcR:1*tcgG:2*gtgI:1*gccC:2*gacE:2*cgaL*gcgS*cggT:3*atcM:1*ttgP:1*ataV:5*gagD:1*gcgR:2*gacG*gaaD:1*aacT*tatI*gccT:1*ccgS*accA:2*cggE*accS:1*cgcC:6*gggE:3*gtgL:2*ggcA*gtgA:1*gaaG*agcD:4*cgcQ:2*gacA*aaaN*gcaT:2*gttT:1*ctgV:1*acgK*cacY*gcgP:2*gatG:1*tcgH:1*ccgQ:3*atgI:4*cccR*gaaD:2*atcN*gatE:5*gtgM*gccS*aatV*gacG*gatN-gtg*gccR*catS*ggtS:2*gtgA*cacQ*ctgF:1*cgtT:4*ggcD:3*accN:2*cacQ*cggE*ttgV*gtgL:1*gatN*aacY:5*accR:1*gccE:9*gcgI:1*ctcI:2-cagatc:1*ggtS:2+R*ggtD*cgcG*gcgL*tggC:7*acgA:2*gacG*ttgM:1*ccgS*gtcT:1*gtgA:1*ggcH:4*cacI:1*cagR:2*cgcS:2*acgF:2*gtgL*ctgS*cgcH*tttA*cttI:1*gggN*cgtC*ccaH*gccM:1*gtgM:7*ctgV:3*acgC:1*gccE:2*ttaV*gcgE:1*gtgL*aaaG:2*cggP*gggE*gtgL*aggS*ttgI:3*tgtS:2*ccgS*ctcI*cggG:1*gagT:3*agcT*tacW*cggV:5*ctgP*agcA*gatN:2*gttI*gagQ*atgL:1*tgcT*tacE:2*cagR*cgaL:1*cggQ:1*gacN:1*cgcE*ctcI*accV*gacA:2*tccF*gccD:2*accS:3*aaaR:4*ttgM:13*atgL*acgS*cttP*gacN:2*atcA*gatN*ggcS:1*cgtD:3*gcgR:7*acgS*gccT*gcgV*cacQ:5*tggR:2*gtgM:4*acgA:3*gagD*ccgT:2*accI:10*tgcG:1*tttD*gtcL*gacT*gacA:1*cagS*gcgE:2*tgcA*agcA:1*gatG+DDF:1*cagE:2*cagS:3*gagQ*atcL:9*atgV:1*gacE*gacE*aacS*agcR:1*cggS:1*tgcR:3*tgcL:2*atgV:1*cacQ:6*tccN:1*gctS*ggcE:1*gtgI:1*gccG:1*tttR:4*gacT*tacH:1*acgA*gcgT*ctgM:2*aggG*gtcL*gacN*aatV:1*ggaA*cccS*tccT:2*tcgE*cacQ*tgcR:1*gacL:3*accA:9*gtgT:1*aacS:1*gaaG:1*tccG:1*accI*gagA*ggcA:2*gcgQ:3*tccA:1*ttgQ*cggP*gtaL:1-atg*acgS*cggQ:2*atcM*cagR:2*cgcL:2*tttL*gacE:3*gccE*gacR:1*aatG*gcgD*cgtN:2-gag:1*gcgP:1*gcgG:1*cgcW:5*gacE:1*gccV*ctgI:1*gacK*atcA*ttcW+PATSP*gtcM*gacG:1*gccP*gccD*ggtI*atgV*gagA:2*caaH*cagH:2*gtgA*atcL:2*gagD*gtcA*gatG*gaaD*ccgC:1*ctgV:1*tccA:3*acgV:3-ttgatc*gcgC*gtaG*gcgS*gtaG*gctC*cgcD*gccT*gatE:2*gcgQ*tctP:6*gacE:4*gtaI*gacN:1*cggE:1*aggT:1*gccS:2*cttD*accY*tttW:1*gcgV:1*gatG*gcgI*gtcF*gtgI*gcgS:1*gacQ:1*gtcI*gcgP*gcaL:1*ccgA:2*caaE*gagQ:5*gccD*gcgS:2*gacN*cacR*tccF*aatV*gcgS*ctgR*tggQ:2*tggL*tgtF*ctcA*ggcC*tacL:2*ctgI*atgW*cggE:1*gagD*ctgA*gccN*gcgG:1*gccL:1*caaL*ttcS*ggcR*gagD:1*gtgT*gacA:3*gcgV*tctA*cagN*gaaD:1*ctgV*cacT:1*gccV*aacL*agcG:1*cagY*ggcV*ctgE:1*ttcM:2*gccS:1*cagI:1*gaaD-ttg:4*gcgT*gcgI:1*gacG:6+T:3*gagG*tacI*ttcY*gcgQ*ggtD*atgL:2*tcgG:1*ttgI:1*acgR:8-cag*acgA:1*caaI*catE:4*gccS:1+DL:2*ttgQ*agtH*ttgN*gcgV*ctgV-cccctctcggca*gcgT*gtgA*cagH*cgcH*gcgE*ttcL*aatM:5*gctV*ggtR:2*cttV*agcT*gcaT:3*tggF*tgtA:1*gatE:2*cagL*tcaA*atgS:2*catW:2*gcgM:3*gcgI*actA:3*atcV:1*gtcI:1*gagQ*ggcD*aagE*cggL*gaaG*gaaK:1*gaaR*cgcD:3*aagA:1*ctcV:2*gcgG*gccV*gagG*agcV*gggQ*gcaT*cacY:1*gatA*ctcM:2*gtgA:2*tgcL:5*agcG*gacE:2*accN:1*catG*gcgQ:1*gcaV:6*gagA:1*atcQ:2*cagR*atcT:1*tcgE:2*ttcH*gcgK:1*tacW*cgtD*tcgA*gacG:1*gtgE*cagA*tcgA*gtgT*acgA:7*gagD*aaaE:2*gacT:8*ttgA*tcgP*atcL*aagD:1*acgA:7*cacR*tccG*tggE:4*gccS*accN:2*gaaD*tcgA:3*accA:1*attH*gacK*gtcI:1*cgaK:2*ggcT:3*gccV*aacT:4*acgA:15*gtcI:4*ggcD*ttcV:3*ctgV:2*gctV:1*gcgE:2*cgcQ*cgtH*accS +NC_000962.3 miniprot mRNA 463438 466665 2606 + . ID=MP000295;Rank=1;Identity=0.5344;Positive=0.6786;Target=tr|Q11028|Q11028_MYCTU 83 1158 +NC_000962.3 miniprot CDS 463438 466665 2606 + 0 Parent=MP000295;Rank=1;Identity=0.5344;Target=tr|Q11028|Q11028_MYCTU 83 1158 +##PAF tr|Q6MWW8|Q6MWW8_MYCTU 714 0 714 - NC_000962.3 699930 673409 675916 1302 2529 0 AS:i:1865 ms:i:1865 np:i:490 fs:i:1 st:i:0 da:i:0 do:i:18 cg:Z:29M1I94M1D46M3D27M2D24M5D20M1I26M2D7M12D29M1D15M4D6M11D11M2I6M11D14M12D81M10D25M28D41M1I24M6D35M2I24M1D33M9D55M3D22M2G8D12M cs:Z::4*atcL*gcgI*acgS:2*atgV*ctgV*accS*acgA:2*acgG:3*aaaN*attV:4*actS:3+K*accA:4*gtgT*gcgT*aaaQ:2*cccA:1*tcaG:5*gtgA*gccR*gttI:5*acgM*cacY*gccG*cagL:3*accA*gtcI:5*acgA*tttY:1*gacQ*cggQ:5*tccR*gcgT*gccG:1*agcA:2*gtgM*gccL:3*gtcT:4*agtN:2*gccN*gcgL*gtcI:5*gcgT:1*ttcL:6*aacD:2*gacN*ggcA*tccT*cccT-ggg*accP:1*cagG:3*ccaD:2*atcL:1*tacF:1*aacS:4*gggA*tctP:5*cgaA:5*gcgS:3*atcL:4*aacS:5-gtgggtacc:2*gggA*gccP:2*cacN:2*gcgN*ggcA:5*aacR:2*gccV:2*tttA:2*gccI:1-gcggtc:2*aacT:5*accH:1*gggW:3*gtcH:2*gccT:2*gccI:2*aacG-ggcatcgccggtgtc*acgP:1*acgG*tcgN*gccG*agcG*acaW*ccgL*ggtL:1*tccN:1*accG*gctH:6+G:2*aacS:5*gccN:2*gtgW:1*atgL:4*aacI:5*gagT:1-gggccc:5*gcgT:1-gccagcggcgcccacgccaccaacttgggcgctgac:1*caaN:1*ggcA*ggaW*aacL*ggcL:1*aatG:2*gctT:2*accA:2*gtcI:2*cccG*ggcN:4*ctgG*ctcN:1-ctc:1*ggcW*agcL*cacL:1*gccN:2*gctN:2*agcL:3-ggcggagctccc:4*aacT:1-gctaccgggacgtggggtcacaaccttggtgcc:2*accH:8+WL*gccL:1*gggT:3-gccggtggcgccagcgtcggcggcagcgcgcat:1*gcgG:2*gcgG*cccA:1*accS:1*tccG:1*agcA:2-aacggcggcgacggcggcaaaggcgccgacgctatc*agcG:2*cagG:2*gcgG*aacD:2*aggT:2*gacR:2*cagL*gtgL*ggtM*aatG*ggcA:4*gccH:2*cgcT:5*ctcA:1*tttV*ggaN*tccG*gaaG*gcgG*cccA:1*cgcG*cccA:5*accN:5*aacQ*ggcA*ggaA*actL*cagL*gccF:1*gacR:8*gccY:5*tccG:2-gctggcagcatcggcttcaatgcgtccgct*cccD:1*gccF*gcaD:1*tcaT*cccM*ggcA:1*aatL:2*aacT:2*cctS:2*gccT:2*gagD:3-ggcggtctcgcgttggccgcctcgggccagaacggcagccagggcgctggcggtgacggcggagccggcgggaacggcgggact:5*cacA:1*gccG:2*gcgQ:1*ggtL*gtcS*aacH*ggtS:2*ggtA:2*ggtS:1*cacK:2*gatA*cccG:1*gtcT:2*gccN:2*cagA:1*ggaS*agcA:1*tccA+D*accA:1*ggtA*gccG*aacS:2*cccM:1*aacS:1*cccG*accF*agcA:2*aacA:2*aacD:2*agaN:1-gccgatgccaccggcttt:1*cagG*accS:3*ggcQ:1*aggN:2*gatN:2*ttgN*gtcG:1*aacT:2*gccK:2*gccT:2*aacA:1*agcM*aaaN*ggcS:1*cccD*ggtP:1+LA*ggcA*aggQ*ctcD:1*aacG*cccQ:1*ctgG*gatT:6*ggtA:4*tccT:1*ggcF*gccT-tgg*gcgQ:1*aacA*ggtD:1*accN*ggcA:1*gccN:2*accD:5*actN:2*tccN:1*agcA:1*ggtN*gtcT*aacT*ggtT*tccA*agcA:2*gcgT-gacgggcaccccggcggcaccggcgga*gttT:2*accA:2*aaaA:2*gacA:2*gacT:4*cccG*aacT:1*gtcT*gccG:1*agcQ:2*cccN:2*gccN:2*gacN:5*gttK:2*aacT:2*cgcA:1*attM*gacN*ggcS*gccL:1*ggcP*gccL*accL:1-ggtgcccgc*ggcA:4*gccQ:2*gccT:2*aagT:2*cgaN*ggcA:1*accA:2*ccgT:1*ggF-ggccgggccggcgggcacaaccgg*cagT:11 +NC_000962.3 miniprot mRNA 673410 675916 1865 - . ID=MP000296;Rank=1;Identity=0.5148;Positive=0.5813;Frameshift=1;Target=tr|Q6MWW8|Q6MWW8_MYCTU 1 714 +NC_000962.3 miniprot CDS 673410 675916 1865 - 0 Parent=MP000296;Rank=1;Identity=0.5148;Frameshift=1;Target=tr|Q6MWW8|Q6MWW8_MYCTU 1 714 +##PAF tr|Q6MWX1|Q6MWX1_MYCTU 393 0 393 - NC_000962.3 699930 466884 468004 417 1206 0 AS:i:472 ms:i:472 np:i:200 fs:i:1 st:i:0 da:i:-1 do:i:210 cg:Z:164M1G40M1I14M15I17M2D41M4D6M1I27M3D34M7I7M3I9M1I5M cs:Z:*gtcM*atgV:13*atcM:1*tccA:4*aggA*cccS:1*atgV*caaA:2*gcaK*gccM:1*caaD*cggS*ctgV:1*aacS*gaaD:1*accF*gcgS*acgA:1*gctS*tccA*tacF*tccQ:2*attV*tccW:3*ggcV*gatG*gacS:1*ctgI:1*ccgS:2*ctgG*tcgL:5*gtcS:6*aggS*gccV:2*gccG*tcgQ:1*gagQ*cagL*gccT:3*gccV*gtgR*gccV:2*aacA:3*tcgT:2*gcgR*gcgL:4*acgP:3*gccE:2*cgcT*acaE*atgL*ctgM*tcaT:1*gtcT*cagA:2*gttL*tttL:7*gcgE*actA*agtN*gaaQ*acgA*cacA:1*ggcS*gaaQ:2*gccG*catQ:1*atcA*ttgE:2*gacY:3*ggcA*gccT*tcgA*gggA*gccT:1*tccT*cagE*tA*tgcL*gccL*gttP*cacF*ccgE*ccaD*ccgA*gcgP*accL*accI*agcT*gggN*gccP:1*tcgG:1*agtL*gacE*gccQ:1*gcgV*acaA*gcgV*gctE*cagE:1*gtaI*gtaD*ccgT:3*gcgN*accQ*gacL*gtgM*agcN*ctgN*ctaV:1+Q*accA:2*tccQ*ttcL*ctaA*ccgQ:1*cccA*ttcQ*gacG*gccV*attV:1+SSKLGGLWTAVSPHL*aacS:1*atcL*gagS*gatN*cttV*gacS*gttS*ctcI*gtaA*gccN*gcaN*gctH*gtaM*gccS*gtcM*gcgM-gctggc*agtG*ttgT:3*gcgM*gcgT*cagN*ctcT*ggcL*gagH*atcS*tacM*cgcL*cacK*gacG*gtgL*gtcA*gacP*gagA:1*caaA*aagQ:1*ccgV*catE*tgcT*ccaA:2*tccN*gacG*cagV*acaW*cccA*gctM*gggS*gccS*gcgL:1*gacS-ggggatctccct*gagQ*gtcL:1*ggaS*cggS*gtcL+G*accS:1*ccgG*ccaL*cagG*ccgA*ccgG:3*ctcN*accL:1*tacR*tccA:1*aacS*atcV:1*ggaS:4*cacP*agcA:1-aatcttccg*ccaA:1*gtgA*cgcN:1*gttA*gcgV*gcgT*atgP*ttcA*cccA*ggcR:1*actL:1*atgL*tatT*atgS*acgL*gggT:1*tcgA*gacA*ggcQ*tccT*tacA*gccP:1*ctgH*gcaM*gcgL*gcgG:2+PLGHSVN:2*accS:1*ctgI*gccN*ggtN+ALR*cttV*gccP:2*ggtA*ggcY*tccA*gcgI:1+R:4*gccG +NC_000962.3 miniprot mRNA 466885 468004 472 - . ID=MP000297;Rank=1;Identity=0.3458;Positive=0.4975;Frameshift=1;Target=tr|Q6MWX1|Q6MWX1_MYCTU 1 393 +NC_000962.3 miniprot CDS 466885 468004 472 - 0 Parent=MP000297;Rank=1;Identity=0.3458;Frameshift=1;Target=tr|Q6MWX1|Q6MWX1_MYCTU 1 393 +##PAF sp|A0A089QRB9|MSL3_MYCTU 2085 0 895 + NC_000962.3 699930 486030 488691 1005 2724 0 AS:i:1313 ms:i:1308 np:i:477 fs:i:0 st:i:0 da:i:300 do:i:1245 cg:Z:43M1I6M10I73M1D202M4D94M1D9M1D34M4I45M2D64M2D93M3I1M1I136M2I44M2D30M cs:Z:*ggtM:1*ggcT*agcA*ataT*aacA*gagT*ccgS:5*gtgM*ggcA:2*tttL:2*gatG:2*ggcS:1*gaaQ:3*gacE*tttA:1*accL*gagR*aagG*aagD*tgtD*gcgL*ataV*acaG*gcgE*tatI:1+A:2*gggW*ttcD*acgA:1+VYYDPEPGVP*gctG*ggaR*actS*ttcV*gcgS*gagR*tccW:1*ggcA:2*aagD:2*gcgG:3*aatC*agaD:2*gatG*atcL*ccgT*ccgE*gacR:2*ctgT*cgaA*atgI:3*caaH:10*ttaI:4*attV*attD:1*gagA*tcaT:1*agaA*cttE:1*cgtQ:6*gtgL*tcgT*tcaH*actG:2-gtc*cggE:1*gtgL:2*agcD*gctC*cagG*caaA*aagA*tctE*actG*attP*tggY*gatG*aacF:2*ggtT:1*tcgN:1*attF*attA*gccS*aatG:1*atcV*tcaA:1*tttT:1*gatG*attL*cagH:2*tccA*attV*gtcT*attV:6*tccG:1*gtcT:3*ctaQ:5*agtD*accD*tggG*gacE*tgcS:1*atcL:2*gtcA:2*acgV*aatV:1*cttT*attL*tcaE:1*gaaR*ccaK*tggS*ggtV*gggS*tttG*aggS*gaaL*gcgQ:1*atcM:2*cagP:2*tgcR:5*aaaE*tccA:3*atgF:1*cgcS:4*ggaV:1*atcL*gtgL:1*cagK:2*agtP:2*cgcV*cttR*gagD:1*cggD:1*ataV:3*ctgV*acgR:1*tcaT:1*gtcA:4*aagR*tccT*aacV*ggtN:1*atgA:2*aatS*cctA*agtQ:3*ggtA:1*cttY*gaaQ*aatQ:1*tgcL*aagA*agcA:1*cgcG:1*gatE*ccgA*ctgS*gaaT*atcV:1*tacM:8*tcgP*ttaV:2*aggP*atcV:1*gcgY*cacA*gccS:1*ggcA*atgA:1*tttY:1*cgcT*aagE-agaccgggatct:2*ctgC*atgA*atcL*gggT:1*atcV:1*ccgT:1*atcF:3*gaaQ*ggtS:1*gctS:1*atcP*gccL:2*atcM:1*gcgT*gtgI:1*atgA*gttL*gagR*cgtH:1*tcgV*ctgV*cttP*ccgQ*agcN*gggL*gggH:1*acgC*gagR*ccaL*aatP*ccaD*gctQ*atcL*ccaA*ttcE*acgI*gaaD*ttgT*ggcE:1*agaF:1*gtaP*gacQ*gaaA*cttN*cagT*gagS:2*gtgD*gtgN*gcgT:1*cggQ:4*gggA:3*ttcY:1*tttM*ggcS:3*gcgV:1*gtgA:1*gtcL:1*gaaQ:1-ggt*tcgP:1*gggS*gcgE*gacP*acgA*gttA:2-cgc*gcgP*gatE*gttL*ggcT*ggtP*tccE*ggtA:2*gtgL*gtgA*gcgL*tggF*gtgP*attV:1*gggA*aagT*acgS:1*tcgE*gcgQ:1*gctH*gctV*cagT:1*ggtA:2*gggA*cggD*tatW:1+DQNG*cggN:1*cggG*ccgS*gcgR*cttV*gatS*gttM*gttR:1*gtgL:2*tcgT:1*gtgS*agcC*acgR:1*tcgA*gtgH*tttR*gatP*catV:1*gcgT:2*gtcT*ggcA*cagS*actS*cgcF:3*ctgS:1*gggA:1*gctR*gggD:1*gttA*gctG-ggtcgg*ccgD*gagQ*gctI*gggP*gtgY*gtcQ*tgcP*ggtA:2*aagH*ccgD*gcgD*ggcR*aagG*acgP*gctV*tttW:2*gccS:6*ctgP:3*agcT:2*tatL*gctV:1*tacE:4*gagA*gccT*ctcV*gatA:1*gtgM*gtgE*gacP*gagV*ttgI*gacA:1*cacE*ctgS*cggG*tatF*ccgS*ctgV*cgcT*gatE*gtgA*atcM-tggggg*cacS*gacA*caaP*gatQ*ctgT*ttgV*aatS*accG*accI*gaaD*ttcR*gccV:2*gcgT*ctgI:3*gagQ:3*tatA*cggA*ctgA:1*atgK:1*tggY:5*ttgA*gtgI*ctgI:3*gtgL:2*ttgA:3*cacV:5*tgtS:1*ccgH:1*gcgG*gcgL*atgR*ctgV*gtgI*gccC*gcgR:1*ggaS:3*cagS*gcgR*ttgI*cccA*gccG*ggcS:3*tttA*gcgS:1*cagE*gccL*cgtP*gaaG*gacQ*gagQ:1*gcgL*ccgS*atgE:1+AIR:1+I*cacS:2*agcV*atcL*gcgS*gcgV:1*aatA*ggtS:1*gctT:1*gtgT:1*atcV*tctG:2*cacT*gatQ*gcgS*gtgI*agcR*gcgD*atcL*gctV*gatA*cggA*ctgW*cgcE*ggcQ:1*ggcD*cgtV*cggL*gtcA*cacR*cggE*ttgV:2*tcgD*catV:1*tttS:1*tcgT*gcgP*ttgQ*atgV*gagD:1*atgI*atcL*gctD:1*ttcL*acaL*gccE:1*gcgL:2*ctgV*tctD*gtgP*ggcT*ttgA:1*acgE:2*gtcY*attY:1*aatA*gtgT*accL*gggW*cagD*ttgP*gtgR*gccE*gacR*gacP*ttcS*gccF*tcaT*gctG*gatE:2*gccV*cggE*catN*atcL:1*gcgY*gtgT:3*ggcA*gacA*agtA:1*cgtQ*agtA:1*cacL*tgcK*gccD:1*gccY*agtR*cgtV:1*atcG:1*gtcL*gggA:1*ggtH*ggcP*ggcL:2*tcgY*ttgA*atcV:1*gcaQ*tcgN*ctgA:1+SL:1*gcgM*cagP:1*gtgA*tcgT*gtgL*cccA*acgA*ctgM:1*aaaR*gatG*cggE*cccQ*gaaL:1*gtcF*agtG*gtgL*atgR*acgG*gcgF*gcgV:1*cagD*ggcV*ttcH*gtcN*tcgA:1*atgA*ggcK*ctgV:1*tggF*gccS*tcgV*gtgQ*tttY*tccP*gggD*tacG:1-cccaag*cggL:1*gagD*ttgA:1*acgL*tatP*gccS*ttcW*cagT:1*caaR*aagT*ttcL*tggM:1*gcaS*ccaR*gccE*ccaD:1*gtcH*agcR*gacS*cccH:1*gccG:1*ggcV:1 +NC_000962.3 miniprot mRNA 486031 488691 1308 + . ID=MP000298;Rank=1;Identity=0.3689;Positive=0.5253;Target=sp|A0A089QRB9|MSL3_MYCTU 1 895 +NC_000962.3 miniprot CDS 486031 488691 1308 + 0 Parent=MP000298;Rank=1;Identity=0.3689;Target=sp|A0A089QRB9|MSL3_MYCTU 1 895 +##PAF tr|I6X8E6|I6X8E6_MYCTU 112 0 112 - NC_000962.3 699930 65014 65350 336 336 0 AS:i:652 ms:i:652 np:i:112 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:112M cs:Z::112 +NC_000962.3 miniprot mRNA 65012 65350 652 - . ID=MP000299;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|I6X8E6|I6X8E6_MYCTU 1 112 +NC_000962.3 miniprot CDS 65012 65350 652 - 0 Parent=MP000299;Rank=1;Identity=1.0000;Target=tr|I6X8E6|I6X8E6_MYCTU 1 112 +NC_000962.3 miniprot stop_codon 65012 65014 0 - 0 Parent=MP000299;Rank=1 +##PAF tr|L7N657|L7N657_MYCTU 161 0 161 + NC_000962.3 699930 193625 194108 483 483 0 AS:i:813 ms:i:813 np:i:161 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:161M cs:Z::161 +NC_000962.3 miniprot mRNA 193626 194111 813 + . ID=MP000300;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|L7N657|L7N657_MYCTU 1 161 +NC_000962.3 miniprot CDS 193626 194111 813 + 0 Parent=MP000300;Rank=1;Identity=1.0000;Target=tr|L7N657|L7N657_MYCTU 1 161 +NC_000962.3 miniprot stop_codon 194109 194111 0 + 0 Parent=MP000300;Rank=1 +##PAF tr|O06296|O06296_MYCTU 136 0 136 + NC_000962.3 699930 415049 415457 405 408 0 AS:i:690 ms:i:690 np:i:136 fs:i:0 st:i:0 da:i:6 do:i:0 cg:Z:136M cs:Z:*ttgM:135 +NC_000962.3 miniprot mRNA 415050 415460 690 + . ID=MP000301;Rank=1;Identity=0.9926;Positive=1.0000;Target=tr|O06296|O06296_MYCTU 1 136 +NC_000962.3 miniprot CDS 415050 415460 690 + 0 Parent=MP000301;Rank=1;Identity=0.9926;Target=tr|O06296|O06296_MYCTU 1 136 +NC_000962.3 miniprot stop_codon 415458 415460 0 + 0 Parent=MP000301;Rank=1 +##PAF tr|O06409|O06409_MYCTU 100 0 100 - NC_000962.3 699930 635575 635875 297 300 0 AS:i:517 ms:i:517 np:i:100 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:100M cs:Z:*gtgM:99 +NC_000962.3 miniprot mRNA 635573 635875 517 - . ID=MP000302;Rank=1;Identity=0.9900;Positive=1.0000;Target=tr|O06409|O06409_MYCTU 1 100 +NC_000962.3 miniprot CDS 635573 635875 517 - 0 Parent=MP000302;Rank=1;Identity=0.9900;Target=tr|O06409|O06409_MYCTU 1 100 +NC_000962.3 miniprot stop_codon 635573 635575 0 - 0 Parent=MP000302;Rank=1 +##PAF sp|O06428|NPPPS_MYCTU 335 0 335 + NC_000962.3 699930 652770 653775 1002 1005 0 AS:i:1659 ms:i:1659 np:i:335 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:335M cs:Z:*gtgM:334 +NC_000962.3 miniprot mRNA 652771 653778 1659 + . ID=MP000303;Rank=1;Identity=0.9970;Positive=1.0000;Target=sp|O06428|NPPPS_MYCTU 1 335 +NC_000962.3 miniprot CDS 652771 653778 1659 + 0 Parent=MP000303;Rank=1;Identity=0.9970;Target=sp|O06428|NPPPS_MYCTU 1 335 +NC_000962.3 miniprot stop_codon 653776 653778 0 + 0 Parent=MP000303;Rank=1 +##PAF tr|O07421|O07421_MYCTU 184 0 184 + NC_000962.3 699930 208416 208968 552 552 0 AS:i:939 ms:i:939 np:i:184 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:184M cs:Z::184 +NC_000962.3 miniprot mRNA 208417 208971 939 + . ID=MP000304;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07421|O07421_MYCTU 1 184 +NC_000962.3 miniprot CDS 208417 208971 939 + 0 Parent=MP000304;Rank=1;Identity=1.0000;Target=tr|O07421|O07421_MYCTU 1 184 +NC_000962.3 miniprot stop_codon 208969 208971 0 + 0 Parent=MP000304;Rank=1 +##PAF tr|O07432|O07432_MYCTU 143 0 143 + NC_000962.3 699930 219485 219914 429 429 0 AS:i:742 ms:i:742 np:i:143 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:143M cs:Z::143 +NC_000962.3 miniprot mRNA 219486 219917 742 + . ID=MP000305;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O07432|O07432_MYCTU 1 143 +NC_000962.3 miniprot CDS 219486 219917 742 + 0 Parent=MP000305;Rank=1;Identity=1.0000;Target=tr|O07432|O07432_MYCTU 1 143 +NC_000962.3 miniprot stop_codon 219915 219917 0 + 0 Parent=MP000305;Rank=1 +##PAF sp|O07778|HK1_MYCTU 168 0 168 - NC_000962.3 699930 697906 698410 501 504 0 AS:i:881 ms:i:881 np:i:168 fs:i:0 st:i:0 da:i:615 do:i:0 cg:Z:168M cs:Z:*gtgM:167 +NC_000962.3 miniprot mRNA 697904 698410 881 - . ID=MP000306;Rank=1;Identity=0.9940;Positive=1.0000;Target=sp|O07778|HK1_MYCTU 1 168 +NC_000962.3 miniprot CDS 697904 698410 881 - 0 Parent=MP000306;Rank=1;Identity=0.9940;Target=sp|O07778|HK1_MYCTU 1 168 +NC_000962.3 miniprot stop_codon 697904 697906 0 - 0 Parent=MP000306;Rank=1 +##PAF tr|O33316|O33316_MYCTU 134 0 97 - NC_000962.3 699930 80184 80511 258 327 0 AS:i:399 ms:i:421 np:i:87 fs:i:0 st:i:2 da:i:138 do:i:396 cg:Z:34M12D63M cs:Z:*gtgM:11*ttcC*cgtG:4*ccgE*tttL*cctR:1*ctgA:2*tttV*cccS:1*tagQ*cttP:4-gcaggtgaaggtgagtttgtcgatatcggttgagcc:63 +NC_000962.3 miniprot mRNA 80185 80511 421 - . ID=MP000307;Rank=1;Identity=0.7890;Positive=0.7982;StopCodon=2;Target=tr|O33316|O33316_MYCTU 1 97 +NC_000962.3 miniprot CDS 80185 80511 421 - 0 Parent=MP000307;Rank=1;Identity=0.7890;StopCodon=2;Target=tr|O33316|O33316_MYCTU 1 97 +##PAF tr|O53673|O53673_MYCTU 159 0 159 - NC_000962.3 699930 302175 302652 477 477 0 AS:i:841 ms:i:841 np:i:159 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:159M cs:Z::159 +NC_000962.3 miniprot mRNA 302173 302652 841 - . ID=MP000308;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|O53673|O53673_MYCTU 1 159 +NC_000962.3 miniprot CDS 302173 302652 841 - 0 Parent=MP000308;Rank=1;Identity=1.0000;Target=tr|O53673|O53673_MYCTU 1 159 +NC_000962.3 miniprot stop_codon 302173 302175 0 - 0 Parent=MP000308;Rank=1 +##PAF tr|P71699|P71699_MYCTU 208 0 208 - NC_000962.3 699930 46583 47207 624 624 0 AS:i:1025 ms:i:1025 np:i:208 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:208M cs:Z::208 +NC_000962.3 miniprot mRNA 46581 47207 1025 - . ID=MP000309;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P71699|P71699_MYCTU 1 208 +NC_000962.3 miniprot CDS 46581 47207 1025 - 0 Parent=MP000309;Rank=1;Identity=1.0000;Target=tr|P71699|P71699_MYCTU 1 208 +NC_000962.3 miniprot stop_codon 46581 46583 0 - 0 Parent=MP000309;Rank=1 +##PAF tr|P96274|P96274_MYCTU 302 0 302 - NC_000962.3 699930 516897 517803 906 906 0 AS:i:1580 ms:i:1580 np:i:302 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:302M cs:Z::302 +NC_000962.3 miniprot mRNA 516895 517803 1580 - . ID=MP000310;Rank=1;Identity=1.0000;Positive=1.0000;Target=tr|P96274|P96274_MYCTU 1 302 +NC_000962.3 miniprot CDS 516895 517803 1580 - 0 Parent=MP000310;Rank=1;Identity=1.0000;Target=tr|P96274|P96274_MYCTU 1 302 +NC_000962.3 miniprot stop_codon 516895 516897 0 - 0 Parent=MP000310;Rank=1 +##PAF sp|P9WG77|THID_MYCTU 275 0 275 - NC_000962.3 699930 507760 508585 822 825 0 AS:i:1409 ms:i:1409 np:i:275 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:275M cs:Z:*gtgM:274 +NC_000962.3 miniprot mRNA 507758 508585 1409 - . ID=MP000311;Rank=1;Identity=0.9964;Positive=1.0000;Target=sp|P9WG77|THID_MYCTU 1 275 +NC_000962.3 miniprot CDS 507758 508585 1409 - 0 Parent=MP000311;Rank=1;Identity=0.9964;Target=sp|P9WG77|THID_MYCTU 1 275 +NC_000962.3 miniprot stop_codon 507758 507760 0 - 0 Parent=MP000311;Rank=1 +##PAF sp|P9WHQ5|PSD_MYCTU 231 0 231 - NC_000962.3 699930 525389 526082 690 693 0 AS:i:1183 ms:i:1183 np:i:231 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:231M cs:Z:*gtgM:230 +NC_000962.3 miniprot mRNA 525387 526082 1183 - . ID=MP000312;Rank=1;Identity=0.9957;Positive=1.0000;Target=sp|P9WHQ5|PSD_MYCTU 1 231 +NC_000962.3 miniprot CDS 525387 526082 1183 - 0 Parent=MP000312;Rank=1;Identity=0.9957;Target=sp|P9WHQ5|PSD_MYCTU 1 231 +NC_000962.3 miniprot stop_codon 525387 525389 0 - 0 Parent=MP000312;Rank=1 +##PAF sp|P9WHY7|PPE47_MYCTU 435 0 422 + NC_000962.3 699930 339363 340932 630 1311 0 AS:i:749 ms:i:802 np:i:262 fs:i:1 st:i:0 da:i:0 do:i:39 cg:Z:2M2I170M1D28M1D9M5I15M1D26M2I7M1I28M3D13M2D15M2D18M1D5M3I15M3D4M298N1M2G33M1D19M cs:Z::2+AP*ctgV:1*atgL:12*agcA:6*gtgL*ttgQ*tcgA:2*gggA*gtgG:2*tcgA:9*gacQ:2*ataS*gggV*ctgV*ctgV*ggcA:2*cagG*accA:1*gctV:6*gcgE*gctL*tatF:3*cacY*gcgV:2*ctcV:3*atgV*cggQ:2*gaaA*accD:2*gaaA:2*gccG*cggE:2*accA*gtgA:2*gccG:1*acgV*accC:1*gtgL:1*gccE:4*gtcP:6*acgL*cttT:1*gggA:22*gcgV:3*acgV:3*agcT*acgV:1*gcgS*accA:1*caaE:2*gccV*gagG:2*gtgL*gcgV*tcgA*gcaT:1*cagH:1*accG:2-ccg:1*atcV*ttgI*gcaV*gccK*gaaP*gcgG:1*gacN*gatE*gacA*cacS*gatN*catA*gacV*cacA*gatA*cacA*gggT*ggcI*gaaT:1*accF:1*ctgF*gacG*tatE:1-gtc:1*gagK*ataF:1*cgcE*atcM*atcA*agcA*ggtQ+AFTEV:1*cgcE:2*tggM*gatK*cccS:2*ggcA*accW*atgA*aacV:1*atcF-ccg*ttcV:1*gatL*tatI:1*gacG*gcaL*gccV*caaN*ccaF*atcE*tggP:1*gttL:1*cgtL*gccT*atcG*gaaM*ttcI*agtD*aagM*gacF:1*gaaA:1+VG:1*gttA*cagL*gaaG*ctgV:2+L*aatV:1*gtgL*gagL*gcaE:1*cagA*ttcV*tacV*tttL:2*ctaA*ttgI*ttcL*gacS*tacI*ccgG*accW*cacI:1*gtgS*cagN:1*gttF*gagG:1*ttgI-agccagtcc:1*cagV:1*ctgG*gcgG*gtcP*gcaL:2*tccA*gtcL*atcA*tccA-aacttg*ggtA*gcgV:1*accP:1*ttcV:3*tccA:1*ttgV:2*atgL-cagccg:2*atcL:2*ctaV*gcaG*cccA*gtcA:1*gcgG:2*tcgA*acaA:1*ccgV*gcgG-gtc*gcgS*atgV:2*accV+SGG*atgV*gccV*gcgS:1*ggcQ:1*gcgR*gttL*gcgV:2*gccV*gcgE:2-tccgcgccg*gcgP:3~gt298ag:1*caV:1*acgV*gtgL:7*catA:3*gccV:3*cgcG*aggK:1*gcgS:1*gccG*gacQ*gcgP:2*atgL:1*acgV:2-ggc:1*gatE:4*ccaA*acgP*acgV:2*gtgL:4*gatG:2 +NC_000962.3 miniprot mRNA 339364 340932 802 + . ID=MP000313;Rank=1;Identity=0.4805;Positive=0.5995;Frameshift=1;Target=sp|P9WHY7|PPE47_MYCTU 1 422 +NC_000962.3 miniprot CDS 339364 340470 647 + 0 Parent=MP000313;Rank=1;Identity=0.4581;Target=sp|P9WHY7|PPE47_MYCTU 1 368 +NC_000962.3 miniprot CDS 340769 340932 155 + 0 Parent=MP000313;Rank=1;Identity=0.6364;Frameshift=1;Target=sp|P9WHY7|PPE47_MYCTU 369 422 +##PAF sp|P9WHY7|PPE47_MYCTU 435 0 432 + NC_000962.3 699930 349934 351458 639 1545 0 AS:i:817 ms:i:817 np:i:261 fs:i:0 st:i:0 da:i:0 do:i:15 cg:Z:191M14D6M14D7M4D16M6I5M1I109M6D5M3D18M33D39M1D16M8D13M cs:Z::1*gccT:2*atcV:1*atgL:12*aatA:7*gtgQ:3*acgA*gccG:2*cagA:6*tcgA*acgV:1*gcaQ:3*gggV*ctaV*ctgV*gggA:2*cctG*ggtA*tggG*gcaV:7*tggL*tacF:3*catY*ttgV:6*acgV:5*gccS:1*ggaA:2*gccG*cagE:6*gccG:1*accV*actC:3*gccE:4*gcgP:6*gtgL*attT:1*accA:15*acgA:10*ttgV:3*gccT:2*ggtS*cttA:1*cagE:1*gctV*tcgV:4*gctV*tcgA*gcgT:1*cgcH:1*gtcG:3*acgV*gttI*atgV*aatK:2*ggcA*ggtN*gcgE:2*actN*gtcA*gggV:1*gtcA-aacccctggcagtggctcttagcgttgcttcaacagctctgg*aacA*gccT*tacI:1*ggtP:1-tacgggtggatgttgcagctcatctggcagttcctgcaggat:1*attF:1*aacE*tcgL*atcA:1-atcatcatcgcc:2*acgE*aatM*cccA*attA:2*ctgF*atcT*actE*tacV:1*ccgE:1*ttgI+MKSAEA*ttcW:1*ctgV:1*tacF+V*cagE*attL*ttcI*ttcT*aacG:2*ggcN*tggF*ccgE*accP:1*ggcL*atgV*atcL*ttgT*agcG*tcgM*ccgI*ttcD*ttgM*ttgF*ccgF:1*gggT*ctcV:1*ctgF*ggcA:1*gcaG*gcaV*ataF*gccV*tttL*ctaV:1*attL*gtgL*cttE*gcgF*cccA*gcgV:1*attL*ccgE*ccgL:1*agtI*actL*ccgS*ctgI*gctG*gctW*gccI*gccI*gtcS*gccN*gccI*gggF*tcgG*gtgA*tggI:1*gcgV*gtcL*agcG*atgG*gccP*gtaL*acgL:2*ggcL*accA:1*gggA*gctV*gcgV*acgP*cccG*gcgV:2*gcgL:1*ccgG*tctV:2*gcaL:1*ccgA*gccL:2*gctV*cccG:1*accA:1*agtG*ttcA*gccP*tatA:1*gtgL*ggtV:1-agcggtgattgggggccg:1*ttgV*gggA:1*acgV-gtaggtggt*cgcS:2*atcV*aagV*gcgS:1*gccQ:1*acgR*gttL*ccgV*gcgS:1*gccV*gcgE*gcgP:1-gcaactcgtgggcagtcgcgcgcgcggcggcgccggcggtctgaattgcgggactacggcgacgagttcttggacatggattccgatagcggtttcggc:1*tcgA*acgS*ggcT*gacS*cacV*ggcS*gcgV*cagL:2*gaaD:4*acgA:3*gccV:3*accG:2*cgcS*cggV*gtcG*cggQ*gcgP*gtcA:3*gcaV:2-ggt:4*aacD:1*cccA*cggP*atgV:2*gtgL:2*accS:1-gagcagggcagcaacgagcccgag*gcgG:2*ggaL*tcgV:1*agaV*gggA:1*ggcD*gacG:2 +NC_000962.3 miniprot mRNA 349935 351458 817 + . ID=MP000314;Rank=2;Identity=0.4136;Positive=0.5068;Target=sp|P9WHY7|PPE47_MYCTU 1 432 +NC_000962.3 miniprot CDS 349935 351458 817 + 0 Parent=MP000314;Rank=2;Identity=0.4136;Target=sp|P9WHY7|PPE47_MYCTU 1 432 +##PAF sp|P9WHZ3|PPE44_MYCTU 382 0 331 - NC_000962.3 699930 467022 468001 396 1032 0 AS:i:495 ms:i:495 np:i:179 fs:i:1 st:i:0 da:i:0 do:i:348 cg:Z:165M1G37M5I19M8I27M13D38M3I16M1I11M cs:Z::9*atcV:4*atcM:1*tccG:1*cccA:1*tccA*aggA*cccD:1*atgL*caaA:5*caaN*cggG*ctgI:1*aacV:1*ctgV*accS*gcgT*acgA:1*gctS:1*tacV*tccG:3*tccT*gggR:1*accS*ggcT*gatE*gacH:1*ctgM:2*tcgA*gcaS:6*gccV*gtcQ:2*gtcL*gcgV:1*atgL*aggT*gccC:2*gccE:1*gccS*gagA*cagL:5*gtgM:1*gcgS:1*aacA:1*tacF:1*tcgT:1*tacF:1*gcgL:4*acgA*gtaE*atcV*gcgV:3*cgcA*acaL*atgL*ctgA*tcaE:1*gtcT*cagA:2*gttI*tttL:3*accV*ccgS:3*actA*agtT:1*acgA*cacR:6*catQ:1*atcA*ttgS:2*gacY:3*ggcA:2*gggA*gccV:1*tccA*cagR:1*cgcN*cP*gttL*cacT*ccgR:1*ccgS*gcgH*accI:1*agcN*gggP:2*tcgL*ctgA*agtH*gacQ:3*acaV*gcgG*gctQ*cagA*gcgG*gtaA*gtaS*ccgA*gccF:1*gcgR*gcgQ*accV*gacG*gtgL:1*ctgH:1+ISDVA*ccaD*accA*ctgV*cagL:2*ctaA*ccgS:1*cccV*ttcM*gacS:1*attA*ccgD*aacT*cccG*atcL:1+AVRQFLNL:1*cttV*gacP*gttL*ctcF:1*gccE*gcaS:1*gtaF*gccH*gtcG*gcgL*gctG:1*agtV*ttgA*gggD*gtaF*tcgA*gcgT:1*cagA*ctcI:1*gagN*atcM-taccgccacgacgtggtcgacgaggcccaaaaggcgccg*catT*tgcL*ccaL:1*gaaD*tccA*gacM*cagG:1*cccV*gctG:3*ggtP*gacG:1*gatG*ctcA*cctA*gagA*gtcA*ggaV*ggaA*cggH*gtcA*accV*agcA:1*ccaA*cagG*ccgV*ccgG*gtcG*gccT:3+ADL:1*tacN*tccA*gctS*aacV*atcV:1*ggaR:4*cacA:2*aatS+T*cttA*ccgA:2*gtgT*cgcA*caaA*gttG:2*atgL +NC_000962.3 miniprot mRNA 467023 468001 495 - . ID=MP000315;Rank=1;Identity=0.3837;Positive=0.5203;Frameshift=1;Target=sp|P9WHZ3|PPE44_MYCTU 1 331 +NC_000962.3 miniprot CDS 467023 468001 495 - 0 Parent=MP000315;Rank=1;Identity=0.3837;Frameshift=1;Target=sp|P9WHZ3|PPE44_MYCTU 1 331 +##PAF sp|P9WI43|PPE04_MYCTU 513 0 513 + NC_000962.3 699930 349934 351473 1539 1539 0 AS:i:2668 ms:i:2668 np:i:513 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:513M cs:Z::513 +NC_000962.3 miniprot mRNA 349935 351476 2668 + . ID=MP000316;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WI43|PPE04_MYCTU 1 513 +NC_000962.3 miniprot CDS 349935 351476 2668 + 0 Parent=MP000316;Rank=1;Identity=1.0000;Target=sp|P9WI43|PPE04_MYCTU 1 513 +NC_000962.3 miniprot stop_codon 351474 351476 0 + 0 Parent=MP000316;Rank=1 +##PAF sp|P9WJU1|MMPLA_MYCTU 1002 0 967 + NC_000962.3 699930 597273 599985 870 2919 0 AS:i:1040 ms:i:1040 np:i:475 fs:i:0 st:i:0 da:i:75 do:i:117 cg:Z:125M1I237M4D11M4I92M2I7M15I13M4I19M5I60M9I15M13I21M5I19M1I15M9I4M2D6M1I254M cs:Z:*atcM:1*ctgG*ctcC:1*ctgV*ggcA*ttcL*accA*gccL*tttV*gtcL*aatP*ctcM:3*caaS:1*gaaA*gtgE*gtcM*ggaA*aaaQ*gcaR:1*tcgP:1*tcgA*atgV*agcL:1*agcA:2*gcaP:1*attS*cagV:1*atcV*aagR*cgcQ*gttM*ggtA*cagE*gtgA:1*ggtH:1*tttS*gatG:1*gatE:1*gcgI*gtaL*acgV*atcV*gtgL:1*gaaT*ggcD*gacE*cagK*ccaG:2*gggA*gacA*gcgD*cacE*cggN*ttcV:1*agcH*gatT:1*atgV*cggD*aagR:1*tccR*gccN:1*accA*cgcK*catD:1*gcgV*cacM*atcL:3*tggL*gggT*gatT:1*ctgP*acaL*gcgR*gcgE*ggaV*tccL*caaG:1*gcgK:1*gatG*cggK:1*gccW*tacI*gtcL*gtgP*gtgI*tacG:1*gtcA:1*aacD*aacL*gaaG:1+P*gaaK*gcgS:1*gacH*tcgA*gtcY*cacT*gcgD:1*cggE*cacR*atgI:1*gacK*accR:1*ccgV*ccaA*ccgG*cacT*gggT*gtgL*aagT:1*tatN:6*ctcT*aatV:2*cagL*gccT*gagD:2*gacA*aaaR*agtD*atcR:1*aagS*gtcI*accE*gcgL*atcA*acgI*agcA*atgV*gtgM*atcL*gcaL*gcaV*atgI:1*ctaM:4*tccN*gtaP*attV:1*gcgM*gttL:1*gtcP:1*atcV*atgT*gtcI:1*atcA*gacS:1*ggcM*gcaT*atcA*cgcQ*ggaA*ttcL*atcV:1*ttgG*ctcV*gccS*gacL*cacV*aacG*attG*ttcL*agcA*cttV:1*acaN*tttQ:1*accI*aacV:2*gttS*ctcA:1*gcgI*attA*gcgG:1*agcG:4*ataV:1*atgL*ctcI*ggcS:4*tcgY*cgcV*tacR*gccL:2*gatH*cggP:1*acgR:1*ttcV*tacQ*acgR*atgA*tttM*cacM*gggS*accV*gccG*cacK:2*ttgA*ggtA:1*ggtA*ttgA:1*attV*gccG*ggcI*gccT*atgF*tatL*tgcG*ctcM*agcR:2*cggK:1*ccgG*tatV:1*gaaS:1*ctcV:1*gcgP*cccA*attL:3*atgI*ctgA:1*gcgS*gtcF:3*ctcV:2*ggcL:2*gtaI:1*accV*gtgL*ggcA:1*ttcP*ttcR*aagG*ctgW*ttcV*gatA:1*aagR*cggG*cggE*atgR*aacM*actA*cggT*cggF:3*gtgA:2*gcaR:3*tggR:1*gggK*ccgA*gtgY:1*gcgG:1*acaS*tgcL-ttggtcgcctcc:3*ctgV:2*cccA:1*tacC*cggA*acaS+LAHF*acgN:2*ctgD:2*ttcQ*atgL:1*gccP:1*atgD:2*aatS:2*gatY:2*gctM*ggtE*cgaH*cgcH:2*cggV*gctN*cggQ*ctgT*aacI:2*gtgY:1*ttgI:1*gagH*actS*gacA:2*atgL:1*aatT:1*gtgR*gacG*atgL*ctgA*gtgD:1*gacE*aagQ*gtaL:1*aaaQ*aatR*atcV*tacS*cacQ*agtI:2*attV*gaaA*caaM:1*aaaR*gcgG*ataV:3*ttgN:1*acaE:1*atcL*aagE*cacQ*actA*tcgR*ataA*ccgT*ttcY*atcQ*atcA*agcG*atgQ*cagV:1+NR*gtgL*aatG*agtG*agcA*gagS*caaR:1+IDERTGDLNRLASGA*gaaN*ttcL*atgL*aagA:1*cgaN*attL*gatG:1*ataV*ctgR*gtgG:1+VSRA:2*gcgG*atgV*aatR*accS*tccL*atcV*gagD*acgA*atgL*catA*cgcY*atgI*tatQ*gcaN*ctcQ*atgF:1+GNKTF*gagN*gtcE:3*accA*gtcA*gacR*atgL*gatV*catS*ctcN*acgI:1*gatA*atgL*tcgG:1*ataA*acgL*gctQ*acgV*ctaN*agaF:1*catG*ctcI:1*gatN*ttcS*gagF:1*ttcW*ttcL*cggD*cctS*attV*cgcV*agcA*tacA*ttcL*tacD*tggT*gaaS*aaaP*catV:1*ttcD*gacS*gttN:1*ctcM:1*tggG*tcgN*ataA:1*tcgV*ataQ:1+HKLQTARDN*gatG*atgT*tttL:1*agtK:1*gacV*cagG:1*agcA*gaaR*aagQ:1*gagQ*tacS+TRSPQTVSAVVND:1*gtcG*aagR*gatS*atgL*gatN*attS*ctgV*attV*acaR*ctgS:1*ccgK*cagS*atgL*cgcG*gcgL*cagD*atgN:1*ccgD+AARAR*atgL:2*gcgM*atgQ*acgN*acgG*atgA*cggN:1*atgL*atgA*cttS*atcA*tggG*catR*ggcQ*acgV*cttA+D:1*gcgV*ttcQ*tatM*aagL*caaV*cagD*gagQ*aggT*aatK:1*aagM*gacG*cccI:1+LNQASAFLM:3*cggN-gttttt:2*gccS:1*atcP*gatS+M*gatA*tcgG:1*tatN*ctgV:1*cagP*tcgQ*gctV*tttL*gagK*aatS*ccgE*gatE:2*cggK*gggV*ctgA*aagQ*atgA:1*ttgI:4*aagH*gcaT*gccV:1*tttY*gtcF:1*gctQ*ctgT*gagD*ggaL*gatN:1*gcaF*acgS*cccT*gagA*ggcA*atcM*tctD*cggQ:1*gagN*ccgT:1*aagI*cggD*gagT:1*agaK*gagG:1*ataQ*aagP*ggaN:1*ccaS:1*cagA*ggcD:1*gcgS:1*tatS*ctgM*ggtS:1*accY*gcgP*gcgV*acgM*ttcL*aagR:3*gagD*ggcY*gccY*agaE*tacR:1*ctgM*ctgR*atcL*gccI*ggaV*gtgA*gcgV*gcgT*ataV*agcV*ttgV*attV*ttgI*atcL:1*atgL:1*atcA*atcL*accL:1*agtA*gtgI:2*gcaP*gtgL*gttY*atcL:2*accS:2*cttI:1*atgY*ggcM*gccS*tctA*ttcI:2*tccG:1*ttgV:1*tggF:1*gacV*attF:2*atcQ:2*tacH:1*atgS:1*ttgP*gcgG*atgL*tcgA*gtgF*atcV*ctgV:1*ctgV:3*tccA:3*ctgM:2*attA:3*aaaR*gagD:1*attS*gggA*gccL:1*ttgV*aacR*accS*ggaS*attV:2*gccT*atgV*gctR*ggtC:4*gtgI:4*atgL*gtgI:2*gttA*accS:2*ttgG*tttL*gtgL:2*gatS*ttgI*cgaG*attT*attV*ggtV:1*atcG:1*accF*accI:2*ctgV:1*ttgI:1*ttcI:2*ctcF:3*tcgT*ttcI*atgT*acaV:1*tccA*attM:1*gcgT:4*tggA*ttcS:3 +NC_000962.3 miniprot mRNA 597274 599985 1040 + . ID=MP000317;Rank=1;Identity=0.2980;Positive=0.4882;Target=sp|P9WJU1|MMPLA_MYCTU 1 967 +NC_000962.3 miniprot CDS 597274 599985 1040 + 0 Parent=MP000317;Rank=1;Identity=0.2980;Target=sp|P9WJU1|MMPLA_MYCTU 1 967 +##PAF sp|P9WKK7|ACEA_MYCTU 428 0 428 + NC_000962.3 699930 557526 558810 1284 1284 0 AS:i:2223 ms:i:2223 np:i:428 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:428M cs:Z::428 +NC_000962.3 miniprot mRNA 557527 558813 2223 + . ID=MP000318;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WKK7|ACEA_MYCTU 1 428 +NC_000962.3 miniprot CDS 557527 558813 2223 + 0 Parent=MP000318;Rank=1;Identity=1.0000;Target=sp|P9WKK7|ACEA_MYCTU 1 428 +NC_000962.3 miniprot stop_codon 558811 558813 0 + 0 Parent=MP000318;Rank=1 +##PAF sp|P9WM69|Y093_MYCTU 282 0 282 - NC_000962.3 699930 102817 103663 843 846 0 AS:i:1465 ms:i:1465 np:i:282 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:282M cs:Z:*gtgM:281 +NC_000962.3 miniprot mRNA 102815 103663 1465 - . ID=MP000319;Rank=1;Identity=0.9965;Positive=1.0000;Target=sp|P9WM69|Y093_MYCTU 1 282 +NC_000962.3 miniprot CDS 102815 103663 1465 - 0 Parent=MP000319;Rank=1;Identity=0.9965;Target=sp|P9WM69|Y093_MYCTU 1 282 +NC_000962.3 miniprot stop_codon 102815 102817 0 - 0 Parent=MP000319;Rank=1 +##PAF sp|P9WME1|Y196_MYCTU 194 0 194 + NC_000962.3 699930 231646 232228 582 582 0 AS:i:975 ms:i:975 np:i:194 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:194M cs:Z::194 +NC_000962.3 miniprot mRNA 231647 232231 975 + . ID=MP000320;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WME1|Y196_MYCTU 1 194 +NC_000962.3 miniprot CDS 231647 232231 975 + 0 Parent=MP000320;Rank=1;Identity=1.0000;Target=sp|P9WME1|Y196_MYCTU 1 194 +NC_000962.3 miniprot stop_codon 232229 232231 0 + 0 Parent=MP000320;Rank=1 +##PAF sp|P9WNG3|FABH_MYCTU 335 0 335 - NC_000962.3 699930 624475 625480 1005 1005 0 AS:i:1710 ms:i:1710 np:i:335 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:335M cs:Z::335 +NC_000962.3 miniprot mRNA 624473 625480 1710 - . ID=MP000321;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WNG3|FABH_MYCTU 1 335 +NC_000962.3 miniprot CDS 624473 625480 1710 - 0 Parent=MP000321;Rank=1;Identity=1.0000;Target=sp|P9WNG3|FABH_MYCTU 1 335 +NC_000962.3 miniprot stop_codon 624473 624475 0 - 0 Parent=MP000321;Rank=1 +##PAF sp|P9WPU1|CTPA_MYCTU 761 0 761 + NC_000962.3 699930 100582 102865 2283 2283 0 AS:i:3786 ms:i:3786 np:i:761 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:761M cs:Z::761 +NC_000962.3 miniprot mRNA 100583 102868 3786 + . ID=MP000322;Rank=1;Identity=1.0000;Positive=1.0000;Target=sp|P9WPU1|CTPA_MYCTU 1 761 +NC_000962.3 miniprot CDS 100583 102868 3786 + 0 Parent=MP000322;Rank=1;Identity=1.0000;Target=sp|P9WPU1|CTPA_MYCTU 1 761 +NC_000962.3 miniprot stop_codon 102866 102868 0 + 0 Parent=MP000322;Rank=1 +##PAF tr|Q6MX04|Q6MX04_MYCTU 590 0 590 - NC_000962.3 699930 428172 434679 1002 1860 0 AS:i:1410 ms:i:1618 np:i:418 fs:i:0 st:i:0 da:i:0 do:i:3393 cg:Z:169M4I4M6D10M8D44M927N5M1D10M1D10M1D84M2631V6M5D27M1110U107M1I44M8D63M cs:Z::1*agcN*ttcY*gcgS:8*gcgL:1*ctgM*tacF*gtgT:3*ttgS:4*gacA:1*gcgS*gccV:3*ggaR:2*gacA:2*ggtA*tcgV:2*gccS:2*tcgG*gcgS:2*gcgS:4*tccQ:2*ctgQ:3*tcgA*acgA:2*acgA*ggaA:5*ctgA:3*agcA:4*cagR:1*cagA*cagG:1*gccS*accA:1*accA*cggK*ctgA*gcgV:1*gccS:5*ctgR:6*gcgM*atcL*atcV*tcgA:3*gcaN*ctgA:2*tcgQ:2*gtcL:3*ctgF:9*accA:2*gccM:6*cagA:5*tttV:3*gccG:5*gtcA*tcgA*gcgQ:1*acaS*ccgS*ttcW*ggcS+IGLQ:4-accgtggcgggcggcggt:1*ctgA*gtcP:2*gccL:2*cagA*gtgI-accacgcgggtcttccgcaacctg:2*gcgG:1*gtcI:1*gagV:2*gtcL:1*aacG:2*gtcT:1*aacD*ttcY:4*gccG:1*atcS:2*ggcA:1*atcV:4*atcS:1*agcN*tccA:1*atcV:1*tttS:2~gt927ac*atcD:1*aatA*tacT:1-att:5*gtcI:1*gacN*ttcT:1-atc:5*ctcV:1*agcN*caaV:1-atc:5*gtcR:1*agcF*ttcG:1*atcL:1*agtN:2*atcF:1*gtaS*ttcG:1*gtcL:3*agcN*ctgT:1*aacS*tacT:1*atcF:1*tccG:4*atcS*tacF:1*atcL:1*tttS:2*gtcI:1*gacS*tacS:1*gtcI:4*gcgN:2*ttcN:1*caaL:1*tttL*gccG:1*accN:7*gccG*aacL:2*aacD:1*aacL*atcV:3*ctA~gt2628ag-c*tacL:1*ttcS:1*ttcI:1-aacgccggcgacttc:4*gccG:1*accS:7*gccF:1*accS:4*atcV:1*atcF*ggcF*ctgN:1*gG~gc1107ag-gc*agcN*gggN:1*gtcF:1*cacF:2*atcA:2*tccI:1*gtcT:1*ctcF:2*ctcA:1*aacD*gcgT:1*gtcT:1*catF:2*atcA:1*agcF:2*gtcM*ttcG*tccI:2*cggA:1*tcaN*tacE*aatD*atcM:1*ccgV*gcgG:1*ctgG:1*aacS*tacF:1*atcV:1*ctaV:2*ctgA:1*agcN*tacQ*aacS*ttcV:6*gatT*ttcL:1*ctgV:4*agcA:2*aacI:1*atcT:4*accS:1*aacS*aacI:1*atcT:1*atcG*gggF*ctgD:2*cacD*aatR*caaN*cagT:3+S:1*tggV*aacD*tccQ*ggtS*accV*gccS*aacS*accS:1*ctgF*ttcG:1*tcgT:1*accM:1*aacS*atcS:1*ttgF:2*tcgT:1*accN*ggaV*aacS*atcA:1*attY:2*tcgN:1*atcD*ggaV*aacQ*accS:2*ggcN:1*ccgT-ggtgtcggcaacaccggcttgggg:3*accG*ggcF:1*tggV:1*ctgF*tggY:1*ccaS:1*accA:1*aatT*atgV:1*gtcI:2*gtgS:1*accL*tacQ*aacT:2*ggcI*tacA:1*gtgS:1*agcT*accL:3*atcV:2*gtgT:1*atcD*gccH*aacS*acgS:1*agcG*tacF:1*accQ:2*accD*aacQ*accS:1*agcF:1*aacG*gacQ*ggcP +NC_000962.3 miniprot mRNA 428173 434679 1618 - . ID=MP000323;Rank=1;Identity=0.5387;Positive=0.6742;Target=tr|Q6MX04|Q6MX04_MYCTU 1 590 +NC_000962.3 miniprot CDS 433957 434679 707 - 0 Parent=MP000323;Rank=1;Identity=0.5959;Target=tr|Q6MX04|Q6MX04_MYCTU 1 231 +NC_000962.3 miniprot CDS 432692 433029 319 - 0 Parent=MP000323;Rank=1;Identity=0.5841;Acceptor=AC;Target=tr|Q6MX04|Q6MX04_MYCTU 232 340 +NC_000962.3 miniprot CDS 429948 430063 110 - 1 Parent=MP000323;Rank=1;Identity=0.5897;Donor=GC;Target=tr|Q6MX04|Q6MX04_MYCTU 341 374 +NC_000962.3 miniprot CDS 428173 428840 482 - 2 Parent=MP000323;Rank=1;Identity=0.4439;Target=tr|Q6MX04|Q6MX04_MYCTU 375 590 +##PAF tr|Q6MX17|Q6MX17_MYCTU 104 0 102 + NC_000962.3 699930 349623 349929 249 306 0 AS:i:394 ms:i:394 np:i:86 fs:i:0 st:i:0 da:i:0 do:i:0 cg:Z:102M cs:Z::29*agcG:3*gtgA:5*ccgA:9*accS:1*gccV:4*cagL:1*gtcS:3*gtcA*gtcI*accA*gccG:8*gccS:2*ggtA:5*gccI*agcG:1*ctgA:4*gccV:5*gggL:1*gtgS:2 +NC_000962.3 miniprot mRNA 349624 349929 394 + . ID=MP000324;Rank=1;Identity=0.8137;Positive=0.8431;Target=tr|Q6MX17|Q6MX17_MYCTU 1 102 +NC_000962.3 miniprot CDS 349624 349929 394 + 0 Parent=MP000324;Rank=1;Identity=0.8137;Target=tr|Q6MX17|Q6MX17_MYCTU 1 102 +##PAF tr|Q7ARS9|Q7ARS9_MYCTU 390 0 390 + NC_000962.3 699930 462134 463304 1167 1170 0 AS:i:2088 ms:i:2088 np:i:390 fs:i:0 st:i:0 da:i:105 do:i:0 cg:Z:390M cs:Z:*gtgM:389 +NC_000962.3 miniprot mRNA 462135 463307 2088 + . ID=MP000325;Rank=1;Identity=0.9974;Positive=1.0000;Target=tr|Q7ARS9|Q7ARS9_MYCTU 1 390 +NC_000962.3 miniprot CDS 462135 463307 2088 + 0 Parent=MP000325;Rank=1;Identity=0.9974;Target=tr|Q7ARS9|Q7ARS9_MYCTU 1 390 +NC_000962.3 miniprot stop_codon 463305 463307 0 + 0 Parent=MP000325;Rank=1 +##PAF tr|V5QPR5|V5QPR5_MYCTU 53 0 53 - NC_000962.3 699930 622123 622282 156 159 0 AS:i:272 ms:i:272 np:i:53 fs:i:0 st:i:0 da:i:-1 do:i:0 cg:Z:53M cs:Z:*gtgM:52 +NC_000962.3 miniprot mRNA 622121 622282 272 - . ID=MP000326;Rank=1;Identity=0.9811;Positive=1.0000;Target=tr|V5QPR5|V5QPR5_MYCTU 1 53 +NC_000962.3 miniprot CDS 622121 622282 272 - 0 Parent=MP000326;Rank=1;Identity=0.9811;Target=tr|V5QPR5|V5QPR5_MYCTU 1 53 +NC_000962.3 miniprot stop_codon 622121 622123 0 - 0 Parent=MP000326;Rank=1