annotate test-data/test_hmm.txt @ 0:dd2f87ccbd2c draft default tip

planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
author iuc
date Sun, 11 Dec 2022 22:28:10 +0000
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dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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2 .__________________________________________________________________________.
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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3 | |
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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4 |________________________________________________.........---------........|
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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5 .--. . . . . ._________________________.
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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6 o | )|\ | / \ _|_ | |
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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7 .--.--. . |--' | \ | /___\ | . . .--..-. |........---------........|
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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8 | | | | | \ | \| / \ | | | | (.-' ._______. ._______.
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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9 ' ' `--' `-' `' '' ``-'`--`-' `--' |.......| |.......|
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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10 Computational detection of microRNA candidates
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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11 v.1.1 Sept 21th, 2022
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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12 Cristian A. Velandia-Huerto, Jöerg Fallmann, Peter F. Stadler
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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13 Bioinformatics Leipzig
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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14 University of Leipzig
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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16 [PROCESS] Generating a carbon-copy of your Unsg genome
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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17 [RESULT] I am ready to run miRNAture
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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18 [PROCESS] The dataset_2.dat covariance list is correctly defined
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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19 [PROCESS] Processing: dataset_2.dat models on Unknown_species genome
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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20 [PROCESS] Running hmm searches mode
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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21 [PROCESS] Merging candidates on hmm
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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22 [PROCESS] The dataset_2.dat covariance list is correctly defined
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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23 [PROCESS] Processing: dataset_2.dat models on Unknown_species genome
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
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24 [PROCESS] Merging candidates on final
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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25 [PROCESS] Refining final candidates on Unsg
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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26 [RESULT] Detected homology candidates by hmm mode
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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27 [PROCESS] Cleaning temporal files...
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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28 [END]
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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29 -¿Olvida usted algo?-
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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30 ¡Ojalá!.
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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32 El emigrante. Luis Felipe Lornelí. (2005)
dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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dd2f87ccbd2c planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
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