diff test-data/mitos2_NC_012920.gff @ 0:dd589aa77943 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mitos commit 791f28c8a7194fdd1ecec05ad166932d461899b2"
author iuc
date Fri, 27 Mar 2020 17:53:42 -0400
parents
children 033755194fe9
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/mitos2_NC_012920.gff	Fri Mar 27 17:53:42 2020 -0400
@@ -0,0 +1,54 @@
+NC_012920	mitfi	ncRNA_gene	577	647	.	+	.	ID=gene_trnF;gene_id=trnF
+NC_012920	mitfi	tRNA	577	647	.	+	.	ID=transcript_trnF;Parent=gene_trnF;gene_id=trnF
+NC_012920	mitfi	exon	577	647	9.99999974738e-06	+	.	Parent=transcript_trnF;Name=trnF
+NC_012920	mitfi	ncRNA_gene	648	1601	.	+	.	ID=gene_rrnS;gene_id=rrnS
+NC_012920	mitfi	rRNA	648	1601	.	+	.	ID=transcript_rrnS;Parent=gene_rrnS;gene_id=rrnS
+NC_012920	mitfi	exon	648	1601	0.0	+	.	Parent=transcript_rrnS;Name=rrnS
+NC_012920	mitfi	ncRNA_gene	3230	3304	.	+	.	ID=gene_trnL2;gene_id=trnL2
+NC_012920	mitfi	tRNA	3230	3304	.	+	.	ID=transcript_trnL2;Parent=gene_trnL2;gene_id=trnL2
+NC_012920	mitfi	exon	3230	3304	2.10000007428e-06	+	.	Parent=transcript_trnL2;Name=trnL2
+NC_012920	mitfi	ncRNA_gene	4263	4331	.	+	.	ID=gene_trnI;gene_id=trnI
+NC_012920	mitfi	tRNA	4263	4331	.	+	.	ID=transcript_trnI;Parent=gene_trnI;gene_id=trnI
+NC_012920	mitfi	exon	4263	4331	6.00000021223e-07	+	.	Parent=transcript_trnI;Name=trnI
+NC_012920	mitfi	ncRNA_gene	4402	4469	.	+	.	ID=gene_trnM;gene_id=trnM
+NC_012920	mitfi	tRNA	4402	4469	.	+	.	ID=transcript_trnM;Parent=gene_trnM;gene_id=trnM
+NC_012920	mitfi	exon	4402	4469	0.00340000004508	+	.	Parent=transcript_trnM;Name=trnM
+NC_012920	mitfi	ncRNA_gene	5587	5655	.	-	.	ID=gene_trnA;gene_id=trnA
+NC_012920	mitfi	tRNA	5587	5655	.	-	.	ID=transcript_trnA;Parent=gene_trnA;gene_id=trnA
+NC_012920	mitfi	exon	5587	5655	0.00179999996908	-	.	Parent=transcript_trnA;Name=trnA
+NC_012920	mitfi	ncRNA_gene	5657	5729	.	-	.	ID=gene_trnN;gene_id=trnN
+NC_012920	mitfi	tRNA	5657	5729	.	-	.	ID=transcript_trnN;Parent=gene_trnN;gene_id=trnN
+NC_012920	mitfi	exon	5657	5729	0.0740000009537	-	.	Parent=transcript_trnN;Name=trnN
+NC_012920	mitfi	ncRNA_gene	5826	5891	.	-	.	ID=gene_trnY;gene_id=trnY
+NC_012920	mitfi	tRNA	5826	5891	.	-	.	ID=transcript_trnY;Parent=gene_trnY;gene_id=trnY
+NC_012920	mitfi	exon	5826	5891	4.20000016347e-15	-	.	Parent=transcript_trnY;Name=trnY
+NC_012920	mitfi	ncRNA_gene	7446	7514	.	-	.	ID=gene_trnS2;gene_id=trnS2
+NC_012920	mitfi	tRNA	7446	7514	.	-	.	ID=transcript_trnS2;Parent=gene_trnS2;gene_id=trnS2
+NC_012920	mitfi	exon	7446	7514	0.0399999991059	-	.	Parent=transcript_trnS2;Name=trnS2
+NC_012920	mitfi	ncRNA_gene	7518	7585	.	+	.	ID=gene_trnD;gene_id=trnD
+NC_012920	mitfi	tRNA	7518	7585	.	+	.	ID=transcript_trnD;Parent=gene_trnD;gene_id=trnD
+NC_012920	mitfi	exon	7518	7585	0.000709999992978	+	.	Parent=transcript_trnD;Name=trnD
+NC_012920	mitfi	ncRNA_gene	8295	8364	.	+	.	ID=gene_trnK;gene_id=trnK
+NC_012920	mitfi	tRNA	8295	8364	.	+	.	ID=transcript_trnK;Parent=gene_trnK;gene_id=trnK
+NC_012920	mitfi	exon	8295	8364	0.0379999987781	+	.	Parent=transcript_trnK;Name=trnK
+NC_012920	mitfi	ncRNA_gene	10405	10469	.	+	.	ID=gene_trnR;gene_id=trnR
+NC_012920	mitfi	tRNA	10405	10469	.	+	.	ID=transcript_trnR;Parent=gene_trnR;gene_id=trnR
+NC_012920	mitfi	exon	10405	10469	0.00510000018403	+	.	Parent=transcript_trnR;Name=trnR
+NC_012920	mitfi	ncRNA_gene	12138	12206	.	+	.	ID=gene_trnH;gene_id=trnH
+NC_012920	mitfi	tRNA	12138	12206	.	+	.	ID=transcript_trnH;Parent=gene_trnH;gene_id=trnH
+NC_012920	mitfi	exon	12138	12206	1.99999999495e-06	+	.	Parent=transcript_trnH;Name=trnH
+NC_012920	mitfi	ncRNA_gene	12266	12336	.	+	.	ID=gene_trnL1;gene_id=trnL1
+NC_012920	mitfi	tRNA	12266	12336	.	+	.	ID=transcript_trnL1;Parent=gene_trnL1;gene_id=trnL1
+NC_012920	mitfi	exon	12266	12336	0.0260000005364	+	.	Parent=transcript_trnL1;Name=trnL1
+NC_012920	mitos	gene	14149	14670	.	-	.	ID=gene_nad6;gene_id=nad6
+NC_012920	mitos	mRNA	14149	14670	.	-	.	ID=transcript_nad6;Parent=gene_nad6;gene_id=nad6
+NC_012920	mitos	exon	14149	14670	39.7	-	2.0	Parent=transcript_nad6;Name=nad6
+NC_012920	mitfi	ncRNA_gene	14674	14742	.	-	.	ID=gene_trnE;gene_id=trnE
+NC_012920	mitfi	tRNA	14674	14742	.	-	.	ID=transcript_trnE;Parent=gene_trnE;gene_id=trnE
+NC_012920	mitfi	exon	14674	14742	0.0320000015199	-	.	Parent=transcript_trnE;Name=trnE
+NC_012920	mitfi	ncRNA_gene	15888	15953	.	+	.	ID=gene_trnT;gene_id=trnT
+NC_012920	mitfi	tRNA	15888	15953	.	+	.	ID=transcript_trnT;Parent=gene_trnT;gene_id=trnT
+NC_012920	mitfi	exon	15888	15953	0.001200000057	+	.	Parent=transcript_trnT;Name=trnT
+NC_012920	mitfi	ncRNA_gene	15956	16023	.	-	.	ID=gene_trnP;gene_id=trnP
+NC_012920	mitfi	tRNA	15956	16023	.	-	.	ID=transcript_trnP;Parent=gene_trnP;gene_id=trnP
+NC_012920	mitfi	exon	15956	16023	0.00520000001416	-	.	Parent=transcript_trnP;Name=trnP