Mercurial > repos > iuc > mothur_classify_otu

comparison tool-data/mothur_taxonomy.loc.sample @ 0:ddb2e4c51634 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
author iuc
date Fri, 19 May 2017 05:02:29 -0400
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-1:000000000000 0:ddb2e4c51634
1 #This is a sample file distributed with Galaxy that enables tools
2 #to use a directory of metagenomics files.
3 #file has this format (white space characters are TAB characters):
4 #
5 # Silva reference files: http://www.mothur.org/wiki/Silva_reference_files
6 #
7 #<taxonomyname> <file_base>
8 #
9 #archaea.gg /project/db/galaxy/mothur/Silva.archaea/silva.archaea.gg.tax
10 #archaea.silva /project/db/galaxy/mothur/Silva.archaea/silva.archaea.silva.tax
11 #archaea.rdp /project/db/galaxy/mothur/Silva.archaea/silva.archaea.rdp.tax
12 #archaea.ncbi /project/db/galaxy/mothur/Silva.archaea/silva.archaea.ncbi.tax
13 #bacteria.gg /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.gg.tax
14 #bacteria.silva /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.silva.tax
15 #bacteria.ncbi /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.ncbi.tax
16 #bacteria.rdp /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp.tax
17 #bacteria.rdp6 /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp6.tax
18 #eukarya.silva /project/db/galaxy/mothur/silva.eukarya.silva.tax
19 #eukarya.ncbi /project/db/galaxy/mothur/silva.eukarya.ncbi.tax
20 #trainset6_032010.rdp.tax /project/db/galaxy/mothur/RDP/trainset6_032010.rdp.tax
21 #trainset7_112011.pds.tax /project/db/galaxy/mothur/RDP/trainset7_112011.pds.tax
22 #trainset7_112011.rdp.tax /project/db/galaxy/mothur/RDP/trainset7_112011.rdp.tax
23 #FungiLSU_train_1400bp_8506_mod.tax /project/db/galaxy/mothur/RDP/FungiLSU_train_1400bp_8506_mod.tax
24 #