Mercurial > repos > iuc > mothur_get_label
view test-data/biosample.xml @ 5:78e5065b27bd draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit be5c8af076296a53959fc3ed2b82d92dc7607eeb
author | iuc |
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date | Mon, 23 Apr 2018 09:34:16 -0400 |
parents | 6c4190485910 |
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<BioSampleAttributes> <Attribute> <Name>EDTA inhibitor tested</Name> <HarmonizedName>edta_inhibitor_tested</HarmonizedName> <Description>Was carbapenemase activity tested in the presence of EDTA? If carbapenemase activity was tested in the presence of EDTA, the response should be "yes", otherwise "no”.</Description> <Format>['', 'yes', 'no', 'missing', 'not applicable', 'not collected']</Format> <Synonym>edta inhibitor tested</Synonym> <Package use="mandatory">Beta-lactamase.1.0</Package> </Attribute> <Attribute> <Name>FAO classification</Name> <HarmonizedName>fao_class</HarmonizedName> <Description>soil classification from the FAO World Reference Database for Soil Resources</Description> <Format>{term}</Format> <Synonym>fao class</Synonym> <Synonym>fao classification</Synonym> <Synonym>soil taxonomic/fao classification</Synonym> <Package use="optional" group_name="Soil">MIGS.ba.soil.4.0</Package> <Package use="optional" group_name="Soil">MIGS.eu.soil.4.0</Package> <Package use="optional" group_name="Soil">MIGS.vi.soil.4.0</Package> <Package use="optional" group_name="Soil">MIMARKS.specimen.soil.4.0</Package> <Package use="optional" group_name="Soil">MIMARKS.survey.soil.4.0</Package> <Package use="optional" group_name="Soil">MIMS.me.soil.4.0</Package> </Attribute> <Attribute> <Name>HIV status</Name> <HarmonizedName>hiv_stat</HarmonizedName> <Description>HIV status of subject, if yes HAART initiation status should also be indicated as [YES or NO]</Description> <Format>{boolean};{boolean}</Format> <Synonym>hiv stat</Synonym> <Synonym>hiv status</Synonym> </Attribute> </BioSampleAttributes>