Mercurial > repos > iuc > mothur_get_seqs
diff test-data/amazon.wang.wang.taxonomy @ 0:bfd467665e6c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit a9d1e0debcd357d8080a1c6c5f1d206dd45a7a4d
| author | iuc |
|---|---|
| date | Fri, 19 May 2017 05:44:07 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/amazon.wang.wang.taxonomy Fri May 19 05:44:07 2017 -0400 @@ -0,0 +1,98 @@ +U68589 Bacteria(92);"Proteobacteria"(40);Gammaproteobacteria(40);"Enterobacteriales"(40);Enterobacteriaceae(40);Escherichia_Shigella(40); +U68590 Bacteria(94);Firmicutes(69);Erysipelotrichia(68);Erysipelotrichales(68);Erysipelotrichaceae(68);Turicibacter(68); +U68591 Bacteria(97);"Proteobacteria"(55);Gammaproteobacteria(55);"Enterobacteriales"(55);Enterobacteriaceae(55);Escherichia_Shigella(55); +U68592 Bacteria(93);"Proteobacteria"(31);Gammaproteobacteria(31);"Enterobacteriales"(31);Enterobacteriaceae(31);Escherichia_Shigella(31); +U68593 Bacteria(98);Firmicutes(55);Erysipelotrichia(31);Erysipelotrichales(31);Erysipelotrichaceae(31);Turicibacter(31); +U68594 Bacteria(93);Firmicutes(72);Clostridia(46);Clostridiales(46);Lachnospiraceae(46);Dorea(22); +U68595 Bacteria(88);TM7(37);TM7_class_incertae_sedis(37);TM7_order_incertae_sedis(37);TM7_family_incertae_sedis(37);TM7_genus_incertae_sedis(37); +U68596 Bacteria(74);TM7(29);TM7_class_incertae_sedis(29);TM7_order_incertae_sedis(29);TM7_family_incertae_sedis(29);TM7_genus_incertae_sedis(29); +U68597 Bacteria(100);Firmicutes(87);Clostridia(54);Clostridiales(54);Lachnospiraceae(54);Clostridium_XlVa(28); +U68598 Bacteria(80);TM7(39);TM7_class_incertae_sedis(39);TM7_order_incertae_sedis(39);TM7_family_incertae_sedis(39);TM7_genus_incertae_sedis(39); +U68599 Bacteria(98);Firmicutes(57);Erysipelotrichia(30);Erysipelotrichales(30);Erysipelotrichaceae(30);Turicibacter(30); +U68600 Bacteria(98);"Proteobacteria"(60);Gammaproteobacteria(60);"Enterobacteriales"(60);Enterobacteriaceae(60);Escherichia_Shigella(60); +U68601 Bacteria(82);Firmicutes(31);Erysipelotrichia(14);Erysipelotrichales(14);Erysipelotrichaceae(14);Turicibacter(14); +U68602 Bacteria(89);"Proteobacteria"(30);Gammaproteobacteria(30);"Enterobacteriales"(30);Enterobacteriaceae(30);Escherichia_Shigella(30); +U68603 Bacteria(91);Firmicutes(76);Erysipelotrichia(51);Erysipelotrichales(51);Erysipelotrichaceae(51);Turicibacter(51); +U68605 Bacteria(86);Firmicutes(79);Clostridia(70);Clostridiales(70);Lachnospiraceae(70);Clostridium_XlVa(39); +U68606 Bacteria(98);TM7(41);TM7_class_incertae_sedis(41);TM7_order_incertae_sedis(41);TM7_family_incertae_sedis(41);TM7_genus_incertae_sedis(41); +U68607 Bacteria(87);TM7(24);TM7_class_incertae_sedis(24);TM7_order_incertae_sedis(24);TM7_family_incertae_sedis(24);TM7_genus_incertae_sedis(24); +U68608 Bacteria(98);TM7(45);TM7_class_incertae_sedis(45);TM7_order_incertae_sedis(45);TM7_family_incertae_sedis(45);TM7_genus_incertae_sedis(45); +U68609 Bacteria(74);Firmicutes(46);Erysipelotrichia(46);Erysipelotrichales(46);Erysipelotrichaceae(46);Turicibacter(46); +U68610 Bacteria(83);Firmicutes(48);Clostridia(40);Clostridiales(40);Lachnospiraceae(40);Clostridium_XlVa(30); +U68611 Bacteria(80);TM7(32);TM7_class_incertae_sedis(32);TM7_order_incertae_sedis(32);TM7_family_incertae_sedis(32);TM7_genus_incertae_sedis(32); +U68612 Bacteria(97);TM7(47);TM7_class_incertae_sedis(47);TM7_order_incertae_sedis(47);TM7_family_incertae_sedis(47);TM7_genus_incertae_sedis(47); +U68613 Bacteria(81);Firmicutes(36);Erysipelotrichia(14);Erysipelotrichales(14);Erysipelotrichaceae(14);Turicibacter(14); +U68614 Bacteria(79);Firmicutes(53);Erysipelotrichia(15);Erysipelotrichales(15);Erysipelotrichaceae(15);Turicibacter(15); +U68615 Bacteria(97);Firmicutes(69);Clostridia(50);Clostridiales(50);Lachnospiraceae(50);Dorea(32); +U68616 Bacteria(94);Firmicutes(69);Erysipelotrichia(33);Erysipelotrichales(33);Erysipelotrichaceae(33);Turicibacter(33); +U68617 Bacteria(79);Firmicutes(36);Erysipelotrichia(14);Erysipelotrichales(14);Erysipelotrichaceae(14);Turicibacter(14); +U68618 Bacteria(73);Firmicutes(31);Erysipelotrichia(25);Erysipelotrichales(25);Erysipelotrichaceae(25);Turicibacter(25); +U68619 Bacteria(86);TM7(41);TM7_class_incertae_sedis(41);TM7_order_incertae_sedis(41);TM7_family_incertae_sedis(41);TM7_genus_incertae_sedis(41); +U68620 Bacteria(67);Firmicutes(24);Erysipelotrichia(18);Erysipelotrichales(18);Erysipelotrichaceae(18);Turicibacter(18); +U68621 Bacteria(94);Firmicutes(67);Erysipelotrichia(31);Erysipelotrichales(31);Erysipelotrichaceae(31);Turicibacter(31); +U68622 Bacteria(98);TM7(37);TM7_class_incertae_sedis(37);TM7_order_incertae_sedis(37);TM7_family_incertae_sedis(37);TM7_genus_incertae_sedis(37); +U68623 Bacteria(98);"Proteobacteria"(27);Gammaproteobacteria(27);"Enterobacteriales"(27);Enterobacteriaceae(27);Escherichia_Shigella(27); +U68624 Bacteria(92);Firmicutes(44);Clostridia(40);Clostridiales(40);Lachnospiraceae(40);Dorea(32); +U68625 Bacteria(96);"Proteobacteria"(45);Gammaproteobacteria(45);"Enterobacteriales"(45);Enterobacteriaceae(45);Escherichia_Shigella(45); +U68626 Bacteria(100);"Proteobacteria"(32);Gammaproteobacteria(32);"Enterobacteriales"(32);Enterobacteriaceae(32);Escherichia_Shigella(32); +U68627 Bacteria(66);Firmicutes(52);Erysipelotrichia(34);Erysipelotrichales(34);Erysipelotrichaceae(34);Turicibacter(34); +U68628 Bacteria(84);Firmicutes(40);Erysipelotrichia(34);Erysipelotrichales(34);Erysipelotrichaceae(34);Turicibacter(34); +U68629 Bacteria(92);Firmicutes(51);Erysipelotrichia(19);Erysipelotrichales(19);Erysipelotrichaceae(19);Turicibacter(19); +U68630 Bacteria(93);Firmicutes(54);Erysipelotrichia(22);Erysipelotrichales(22);Erysipelotrichaceae(22);Turicibacter(22); +U68631 Bacteria(87);Firmicutes(47);Clostridia(41);Clostridiales(41);Lachnospiraceae(41);Clostridium_XlVa(26); +U68632 Bacteria(94);Firmicutes(74);Clostridia(60);Clostridiales(60);Lachnospiraceae(60);Dorea(33); +U68633 Bacteria(96);TM7(64);TM7_class_incertae_sedis(64);TM7_order_incertae_sedis(64);TM7_family_incertae_sedis(64);TM7_genus_incertae_sedis(64); +U68634 Bacteria(68);Firmicutes(34);Erysipelotrichia(8);Erysipelotrichales(8);Erysipelotrichaceae(8);Turicibacter(8); +U68635 Bacteria(91);Firmicutes(38);Erysipelotrichia(19);Erysipelotrichales(19);Erysipelotrichaceae(19);Turicibacter(19); +U68636 Bacteria(85);Firmicutes(49);Clostridia(39);Clostridiales(39);Lachnospiraceae(39);Clostridium_XlVa(23); +U68637 Bacteria(85);Firmicutes(38);Erysipelotrichia(21);Erysipelotrichales(21);Erysipelotrichaceae(21);Turicibacter(21); +U68638 Bacteria(80);Firmicutes(46);Erysipelotrichia(21);Erysipelotrichales(21);Erysipelotrichaceae(21);Turicibacter(21); +U68639 Bacteria(99);TM7(45);TM7_class_incertae_sedis(45);TM7_order_incertae_sedis(45);TM7_family_incertae_sedis(45);TM7_genus_incertae_sedis(45); +U68640 Bacteria(76);Firmicutes(59);Clostridia(59);Clostridiales(59);Lachnospiraceae(59);Dorea(29); +U68641 Bacteria(82);Firmicutes(23);Erysipelotrichia(14);Erysipelotrichales(14);Erysipelotrichaceae(14);Turicibacter(14); +U68642 Bacteria(63);Firmicutes(44);Erysipelotrichia(26);Erysipelotrichales(26);Erysipelotrichaceae(26);Turicibacter(26); +U68643 Bacteria(67);"Proteobacteria"(33);Gammaproteobacteria(33);"Enterobacteriales"(33);Enterobacteriaceae(33);Escherichia_Shigella(33); +U68644 Bacteria(98);Firmicutes(67);Erysipelotrichia(48);Erysipelotrichales(48);Erysipelotrichaceae(48);Turicibacter(48); +U68645 Bacteria(84);Firmicutes(36);Erysipelotrichia(20);Erysipelotrichales(20);Erysipelotrichaceae(20);Turicibacter(20); +U68646 Bacteria(96);Firmicutes(68);Erysipelotrichia(37);Erysipelotrichales(37);Erysipelotrichaceae(37);Turicibacter(37); +U68647 Bacteria(87);Firmicutes(59);Clostridia(41);Clostridiales(41);Lachnospiraceae(41);Dorea(23); +U68648 Bacteria(98);Firmicutes(71);Clostridia(65);Clostridiales(65);Lachnospiraceae(65);Clostridium_XlVa(45); +U68649 Bacteria(94);"Proteobacteria"(50);Gammaproteobacteria(50);"Enterobacteriales"(50);Enterobacteriaceae(50);Escherichia_Shigella(50); +U68651 Bacteria(79);TM7(27);TM7_class_incertae_sedis(27);TM7_order_incertae_sedis(27);TM7_family_incertae_sedis(27);TM7_genus_incertae_sedis(27); +U68652 Bacteria(100);TM7(50);TM7_class_incertae_sedis(50);TM7_order_incertae_sedis(50);TM7_family_incertae_sedis(50);TM7_genus_incertae_sedis(50); +U68653 Bacteria(77);Firmicutes(71);Erysipelotrichia(45);Erysipelotrichales(45);Erysipelotrichaceae(45);Turicibacter(45); +U68654 Bacteria(97);TM7(56);TM7_class_incertae_sedis(56);TM7_order_incertae_sedis(56);TM7_family_incertae_sedis(56);TM7_genus_incertae_sedis(56); +U68655 Bacteria(79);Firmicutes(41);Erysipelotrichia(35);Erysipelotrichales(35);Erysipelotrichaceae(35);Turicibacter(35); +U68656 Bacteria(84);"Proteobacteria"(53);Gammaproteobacteria(53);"Enterobacteriales"(53);Enterobacteriaceae(53);Escherichia_Shigella(53); +U68657 Bacteria(70);Firmicutes(44);Erysipelotrichia(32);Erysipelotrichales(32);Erysipelotrichaceae(32);Turicibacter(32); +U68658 Bacteria(61);Firmicutes(23);Erysipelotrichia(17);Erysipelotrichales(17);Erysipelotrichaceae(17);Turicibacter(17); +U68659 Bacteria(97);Firmicutes(36);Erysipelotrichia(28);Erysipelotrichales(28);Erysipelotrichaceae(28);Turicibacter(28); +U68660 Bacteria(95);Firmicutes(85);Clostridia(72);Clostridiales(72);Lachnospiraceae(72);Dorea(40); +U68661 Bacteria(94);Firmicutes(52);Erysipelotrichia(24);Erysipelotrichales(24);Erysipelotrichaceae(24);Turicibacter(24); +U68662 Bacteria(98);TM7(42);TM7_class_incertae_sedis(42);TM7_order_incertae_sedis(42);TM7_family_incertae_sedis(42);TM7_genus_incertae_sedis(42); +U68663 Bacteria(95);Firmicutes(89);Erysipelotrichia(49);Erysipelotrichales(49);Erysipelotrichaceae(49);Turicibacter(49); +U68664 Bacteria(100);Firmicutes(61);Clostridia(44);Clostridiales(44);Lachnospiraceae(44);Coprococcus(17); +U68665 Bacteria(100);Firmicutes(83);Erysipelotrichia(20);Erysipelotrichales(20);Erysipelotrichaceae(20);Turicibacter(20); +U68666 Bacteria(91);TM7(27);TM7_class_incertae_sedis(27);TM7_order_incertae_sedis(27);TM7_family_incertae_sedis(27);TM7_genus_incertae_sedis(27); +U68667 Bacteria(78);Firmicutes(33);Erysipelotrichia(26);Erysipelotrichales(26);Erysipelotrichaceae(26);Turicibacter(26); +U68668 Bacteria(56);Firmicutes(28);Erysipelotrichia(14);Erysipelotrichales(14);Erysipelotrichaceae(14);Turicibacter(14); +U68669 Bacteria(67);Firmicutes(50);Erysipelotrichia(34);Erysipelotrichales(34);Erysipelotrichaceae(34);Turicibacter(34); +U68670 Bacteria(69);Firmicutes(30);Clostridia(30);Clostridiales(30);Lachnospiraceae(30);Coprococcus(21); +U68671 Bacteria(98);Firmicutes(59);Clostridia(41);Clostridiales(41);Lachnospiraceae(41);Clostridium_XlVa(24); +U68672 Bacteria(89);Firmicutes(57);Erysipelotrichia(21);Erysipelotrichales(21);Erysipelotrichaceae(21);Turicibacter(21); +U68673 Bacteria(89);"Proteobacteria"(41);Gammaproteobacteria(41);"Enterobacteriales"(41);Enterobacteriaceae(41);Escherichia_Shigella(41); +U68674 Bacteria(99);"Proteobacteria"(57);Gammaproteobacteria(57);"Enterobacteriales"(57);Enterobacteriaceae(57);Escherichia_Shigella(57); +U68675 Bacteria(79);Firmicutes(55);Erysipelotrichia(37);Erysipelotrichales(37);Erysipelotrichaceae(37);Turicibacter(37); +U68676 Bacteria(85);Firmicutes(65);Clostridia(54);Clostridiales(54);Lachnospiraceae(54);Dorea(38); +U68677 Bacteria(49);TM7(22);TM7_class_incertae_sedis(22);TM7_order_incertae_sedis(22);TM7_family_incertae_sedis(22);TM7_genus_incertae_sedis(22); +U68678 Bacteria(85);Firmicutes(49);Erysipelotrichia(41);Erysipelotrichales(41);Erysipelotrichaceae(41);Turicibacter(41); +U68679 Bacteria(98);Firmicutes(94);Clostridia(62);Clostridiales(62);Lachnospiraceae(62);Dorea(40); +U68680 Bacteria(99);Firmicutes(43);Clostridia(33);Clostridiales(33);Lachnospiraceae(33);Dorea(25); +U68681 Bacteria(59);TM7(16);TM7_class_incertae_sedis(16);TM7_order_incertae_sedis(16);TM7_family_incertae_sedis(16);TM7_genus_incertae_sedis(16); +U68682 Bacteria(82);TM7(26);TM7_class_incertae_sedis(26);TM7_order_incertae_sedis(26);TM7_family_incertae_sedis(26);TM7_genus_incertae_sedis(26); +U68683 Bacteria(86);Firmicutes(49);Erysipelotrichia(24);Erysipelotrichales(24);Erysipelotrichaceae(24);Turicibacter(24); +U68684 Bacteria(100);TM7(39);TM7_class_incertae_sedis(39);TM7_order_incertae_sedis(39);TM7_family_incertae_sedis(39);TM7_genus_incertae_sedis(39); +U68685 Bacteria(88);TM7(59);TM7_class_incertae_sedis(59);TM7_order_incertae_sedis(59);TM7_family_incertae_sedis(59);TM7_genus_incertae_sedis(59); +U68686 Bacteria(85);"Proteobacteria"(37);Gammaproteobacteria(37);"Enterobacteriales"(37);Enterobacteriaceae(37);Escherichia_Shigella(37); +U68687 Bacteria(100);Firmicutes(46);Erysipelotrichia(34);Erysipelotrichales(34);Erysipelotrichaceae(34);Turicibacter(34); +U68688 Bacteria(95);Firmicutes(88);Erysipelotrichia(34);Erysipelotrichales(34);Erysipelotrichaceae(34);Turicibacter(34);