comparison indicator.xml @ 2:5d1f9418ff72 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit ca8dc573528ab7c5290bc6ca029cb989f4755db6

1:b569c0119fe2

            <param name="havedesign" type="select" label="Will you supply a design file?">
                <option value="yes">yes</option>
                <option value="no">no</option>
            </param>
            <when value="yes">
                <param name="tree" type="data" format="tree" optional="true" label="tree - A newick-formatted tree" help="Optional, if a design file is provided."/>
                <param name="design" type="data" format="mothur.design" optional="true" label="design - assign groups to new grouping" help="make sure your file is of type mothur.design. Design has 2 columns: group(col 1) and grouping(col 2) (separated by a TAB character)"/>
                <param name="groups" type="select" optional="true" multiple="true" label="groups - Pick groups to annalyze">
                    <options>
                        <filter type="data_meta" ref="design" key="groups"/>
                    </options>
                </param>
            </when>
            <when value="no">
                <param name="tree" type="data" format="tree" label="tree - A newick-formatted tree" help="Mandatory if no design file is provided"/>
                <param name="groups" type="select" optional="true" multiple="true" label="groups - Pick groups to annalyze">
                    <options>
                        <filter type="data_meta" ref="otu" key="groups"/>
                    </options>
                </param>

2:5d1f9418ff72

            <param name="havedesign" type="select" label="Will you supply a design file?">
                <option value="yes">yes</option>
                <option value="no">no</option>
            </param>
            <when value="yes">
                <param name="tree" type="data" format="mothur.tre" optional="true" label="tree - A newick-formatted tree" help="Optional, if a design file is provided."/>
                <param name="design" type="data" format="mothur.design" optional="true" label="design - assign groups to new grouping" help="make sure your file is of type mothur.design. Design has 2 columns: group(col 1) and grouping(col 2) (separated by a TAB character)"/>
                <param name="groups" type="select" optional="true" multiple="true" label="groups - Pick groups to annalyze">
                    <options>
                        <filter type="data_meta" ref="design" key="groups"/>
                    </options>
                </param>
            </when>
            <when value="no">
                <param name="tree" type="data" format="mothur.tre" label="tree - A newick-formatted tree" help="Mandatory if no design file is provided"/>
                <param name="groups" type="select" optional="true" multiple="true" label="groups - Pick groups to annalyze">
                    <options>
                        <filter type="data_meta" ref="otu" key="groups"/>
                    </options>
                </param>