Mercurial > repos > iuc > multigps
comparison multigps.xml @ 1:7e0a12282c7f draft
Uploaded
author | iuc |
---|---|
date | Tue, 28 Mar 2017 12:24:56 -0400 |
parents | 4aa531981208 |
children | 028fafca04fa |
comparison
equal
deleted
inserted
replaced
0:4aa531981208 | 1:7e0a12282c7f |
---|---|
149 --diffp $rbec.diffp | 149 --diffp $rbec.diffp |
150 #end if | 150 #end if |
151 #end if | 151 #end if |
152 2>&1 | 152 2>&1 |
153 --out '$output_html.files_path' | 153 --out '$output_html.files_path' |
154 && cp $output_dir/*.events.txt '$experiment_events' || true | 154 && cp $output_dir/*.events.txt '$experiment_events' |
155 && mv $output_dir/*.html '$output_html' || true | 155 && mv $output_dir/*.html '$output_html' |
156 && mv $output_dir/*.table.txt '$all_events_table' || true | 156 && mv $output_dir/*.table.txt '$all_events_table' |
157 && mv $output_dir/*.counts '$replicates_counts' || true | 157 && mv $output_dir/*.counts '$replicates_counts' |
158 ]]> | 158 ]]> |
159 </command> | 159 </command> |
160 <inputs> | 160 <inputs> |
161 <param name="expt" type="data" format="bam,bed,scidx" label="Run MultiGPS on"> | 161 <param name="expt" type="data" format="bam,bed,scidx" label="Run MultiGPS on"> |
162 <validator type="unspecified_build" /> | 162 <validator type="unspecified_build" /> |