Mercurial > repos > iuc > multiqc
annotate test-data/tophat.txt @ 24:f7e2f1eb3a16 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit dffbb5d421a5a5773bcb7f05933b12c45461bb58
author | iuc |
---|---|
date | Mon, 02 Sep 2024 14:22:54 +0000 |
parents | 3bad335ccea9 |
children |
rev | line source |
---|---|
0
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
1 Left reads: |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
2 Input : 316390 |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
3 Mapped : 314921 (99.5% of input) |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
4 of these: 5715 ( 1.8%) have multiple alignments (0 have >20) |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
5 Right reads: |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
6 Input : 316390 |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
7 Mapped : 314789 (99.5% of input) |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
8 of these: 5707 ( 1.8%) have multiple alignments (0 have >20) |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
9 99.5% overall read mapping rate. |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
10 |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
11 Aligned pairs: 313405 |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
12 of these: 5638 ( 1.8%) have multiple alignments |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
13 34 ( 0.0%) are discordant alignments |
3bad335ccea9
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 264fd61d39f252ebb81731bf6cd3349fdb39b306
iuc
parents:
diff
changeset
|
14 99.0% concordant pair alignment rate. |