Sample	Total Reads	Mapped Reads	Alignments in blacklisted regions	Estimated mapped reads filtered	Below MAPQ	Missing Flags	Excluded Flags	Internally-determined Duplicates	Marked Duplicates	Singletons	Wrong strand
bwameth_se.pbat.bam	71373361	46192726	0	14151494.8	5163035.6	0.0	0.0	20264594.9	0.0	0.0	4596084.6
bismark_se.pbat.bam	30924955	30924955	0	13624010.0	10983580.2	0.0	0.0	13414682.1	0.0	0.0	1542611.8
